Prupe.5G206200_v2.0.a1

Ras GTPase-activating protein-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
16463802 .. 16468515
4714 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G206200.1

Sequence Viewer

Length: 1395 bp
ATGCAGGAAGCATCTCCTGCCTCTGCTCCCAGTGCCCAACTTGTTGGCAATGCCTTTGTGGAGCAATATTACCATATTCTTCATGAATCTCCACAATTAGTGCATAGGTTTTATCAGGATTCCAGCTCTCTTAGCAGGACAGATGTCAATGGCAATATGGCAACAGTGACAACTATGCAAGCAATAAGTCAAAAAATTCAGTCCTTAAATTATGGAGACTATACGGCAGAAATAAAAACTGCAGATTCTCAGGAGTCTTATGAGAAAGGAGTGATTGTTCTCGTCACCGGATGCTTGACTGGAAAGGACAATGTGGGAAGAAAATTTGCCCAAACATTCTTTCTAGCTCCACAGGAGAAGGGGTATTATGTCTTAAATGATGTTTTTAGGTATATTGAGGACAATGAATCTTTGCAGACCAATAATGTCTTGGTTAACGGCATCAATGAAAGTGCTCCAGAAGCTATCTTGACAGCAGAACCAGAGCCTACTCACGCTCCCGATCATCTTGTGGTGGATCGTGCAACTTCCTTTGAGGAAGAGGATCTCAATAATGGTCCTGAAGTTTGTGATCCTTCAGATAATGATGAAGGATCAGTTATTGAAGAAGAGATTGTGGAGCCCCCAGCTCACTCAAGTCAGAATCAAGGTCTTGCAGATGTTGATCCAACCCCTGATCCTGCCCCTGAAACCCAGGAGGATGTTCCAAAGAAATCATATGCATCAATTGTAATGAAAAGTAATGCTGCATCCAGTCCTGTCCGTGTGCCTACCCGCACCGTGAGGACAATATCTGCAAACACTGACCATCAATCCCTTGGTTTTGCACAACCAGCTCCTGCACCAGTGGCATCAGCTCCTAGTGGTGATGCTGCCCCTGAAAGTAGCAATGCTCATGAGGAAGAAGGTCACTCCATACATGTACGGAATTTGCCATATGATGCAACAGTGGAACAACTTGAGAAGGAGTTTAAGAAATTTGGGCCTATTAAGCGTGATGGGATCCAAGTCCGGAGTAGTAAGCAAGGATTCTGCTTTGGCTTTGTTGAATTTGAGACTTTGAGTTCCATGCAAAGTGCACTTGAGGCTTCACCTATCACCATCGGGGACCGCCCGGCAGTGATCGAGGAAAAGAGAACCACAACTCGAGTTAGCAGTGGTGGGAGAGGAAGGTTCTCTTCAGGAAGAGCTGGCTTTCGGAGTGACACTTTCAGGGGTCGTGGGAACTATGGTGGTGGCCGTAGCTATGGCAGGAATGAATTCAGAAACCAGGGTGAGTTTTCTGGGCGAGCCAGGGGAGCTGGACGAAATGGAGAGGGTTATCAGCGGGTGAATCTGAATGGAAGAGGTGGTGGACGTCAAGGTGCGGCAAACCGCAGTTCCGTTCCTGCTTGA

Protein Analysis

465

Amino Acids

50.21

Weight (kDa)

5.14

Isoelectric Point (pI)

56.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1360
AccIII TCCGGA 1 cut(s) 1011
AciI CCGC 5 cut(s) 775, 1111, 1327, 1367, 1375
AclWI GGATC 8 cut(s) 525, 552, 566, 601, 659, 671, 997, 1010
AcoI YGGCCR 1 cut(s) 1237
AcsI RAATTY 6 cut(s) 195, 323, 928, 977, 1049, 1259
AcuI CTGAAG 3 cut(s) 561, 582, 1164
AcyI GRCGYC 1 cut(s) 1357
AfaI GTAC 1 cut(s) 924
AflIII ACRYGT 1 cut(s) 919
AgsI TTSAA 2 cut(s) 605, 1049
AjnI CCWGG 3 cut(s) 693, 1269, 1292
AjuI GAANNNNNNNTTGG 2 cut(s) 324, 356
AloI GAACNNNNNNTCC 2 cut(s) 261, 293
AluBI AGCT 9 cut(s) 126, 347, 464, 629, 836, 857, 1190, 1245, 1301
AluI AGCT 9 cut(s) 126, 347, 464, 629, 836, 857, 1190, 1245, 1301
Alw21I GWGCWC 2 cut(s) 457, 1081
Alw26I GTCTC 2 cut(s) 210, 1049
Alw44I GTGCAC 1 cut(s) 1077
AlwI GGATC 8 cut(s) 525, 552, 566, 601, 659, 671, 997, 1010
AlwNI CAGNNNCTG 1 cut(s) 839
Ama87I CYCGRG 1 cut(s) 1146
Aor13HI TCCGGA 1 cut(s) 1011
AoxI GGCC 2 cut(s) 983, 1237
ApaLI GTGCAC 1 cut(s) 1077
ApeKI GCWGC 2 cut(s) 746, 872
ApoI RAATTY 6 cut(s) 195, 323, 928, 977, 1049, 1259
Asp700I GAANNNNTTC 1 cut(s) 1259
AspS9I GGNCC 3 cut(s) 557, 983, 1108
AsuC2I CCSGG 1 cut(s) 1115
AsuHPI GGTGA 6 cut(s) 277, 878, 1083, 1090, 1286, 1342
AvaI CYCGRG 1 cut(s) 1146
AvaII GGWCC 2 cut(s) 557, 1108
BaeGI GKGCMC 2 cut(s) 37, 1081
BamHI GGATCC 1 cut(s) 1002
BanII GRGCYC 1 cut(s) 624
Bbv12I GWGCWC 2 cut(s) 457, 1081
BbvI GCAGC 2 cut(s) 733, 859
BccI CCATC 3 cut(s) 816, 992, 1109
BceAI ACGGC 3 cut(s) 240, 454, 1224
BciT130I CCWGG 3 cut(s) 695, 1271, 1294
BcnI CCSGG 1 cut(s) 1115
BcoDI GTCTC 2 cut(s) 210, 1049
BfaI CTAG 2 cut(s) 344, 861
BfmI CTRYAG 1 cut(s) 240
BisI GCNGC 3 cut(s) 747, 873, 1368
BlsI GCNGC 3 cut(s) 748, 874, 1369
Bme1390I CCNGG 4 cut(s) 695, 1115, 1271, 1294
Bme18I GGWCC 2 cut(s) 557, 1108
BmeT110I CYCGRG 1 cut(s) 1146
BmgT120I GGNCC 3 cut(s) 557, 983, 1108
BmiI GGNNCC 3 cut(s) 621, 1004, 1109
BmrFI CCNGG 4 cut(s) 695, 1115, 1271, 1294
BmrI ACTGGG 1 cut(s) 24
BmsI GCATC 8 cut(s) 20, 281, 450, 731, 758, 859, 860, 931
BmuI ACTGGG 1 cut(s) 24
BoxI GACNNNNGTC 1 cut(s) 143
BpmI CTGGAG 1 cut(s) 441
BpuEI CTTGAG 3 cut(s) 619, 980, 1103
BpuMI CCSGG 1 cut(s) 1115
BsaBI GATNNNNATC 1 cut(s) 663
BsaHI GRCGYC 1 cut(s) 1357
BsaJI CCNNGG 4 cut(s) 693, 817, 1270, 1293
BsaWI WCCGGW 2 cut(s) 287, 1011
BsaXI ACNNNNNCTCC 6 cut(s) 261, 291, 347, 377, 481, 511
Bse1I ACTGG 4 cut(s) 30, 304, 753, 845
Bse3DI GCAATG 2 cut(s) 55, 895
Bse8I GATNNNNATC 1 cut(s) 663
BseAI TCCGGA 1 cut(s) 1011
BseBI CCWGG 3 cut(s) 695, 1271, 1294
BseDI CCNNGG 4 cut(s) 693, 817, 1270, 1293
BseGI GGATG 3 cut(s) 296, 706, 749
BseJI GATNNNNATC 1 cut(s) 663
BseMI GCAATG 2 cut(s) 55, 895
BseMII CTCAG 1 cut(s) 263
BseNI ACTGG 4 cut(s) 30, 304, 753, 845
BseSI GKGCMC 2 cut(s) 37, 1081
BseXI GCAGC 2 cut(s) 733, 859
BseYI CCCAGC 1 cut(s) 625
BsgI GTGCAG 1 cut(s) 825
BshFI GGCC 2 cut(s) 985, 1239
BsiHKAI GWGCWC 2 cut(s) 457, 1081
BsiHKCI CYCGRG 1 cut(s) 1146
BsiSI CCGG 3 cut(s) 288, 1012, 1115
BslFI GGGAC 1 cut(s) 1121
BsmAI GTCTC 2 cut(s) 210, 1049
BsmFI GGGAC 1 cut(s) 1121
BsnI GGCC 2 cut(s) 985, 1239
BsoBI CYCGRG 1 cut(s) 1146
Bsp1286I GDGCHC 4 cut(s) 37, 457, 624, 1081
Bsp13I TCCGGA 1 cut(s) 1011
Bsp143I GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
BspACI CCGC 5 cut(s) 775, 1111, 1327, 1367, 1375
BspANI GGCC 2 cut(s) 985, 1239
BspCNI CTCAG 1 cut(s) 262
BspEI TCCGGA 1 cut(s) 1011
BspHI TCATGA 2 cut(s) 82, 895
BspLI GGNNCC 3 cut(s) 621, 1004, 1109
BspMAI CTGCAG 1 cut(s) 244
BspPI GGATC 8 cut(s) 525, 552, 566, 601, 659, 671, 997, 1010
BspQI GCTCTTC 1 cut(s) 1180
BsrDI GCAATG 2 cut(s) 55, 895
BsrI ACTGG 4 cut(s) 30, 304, 753, 845
BssECI CCNNGG 4 cut(s) 693, 817, 1270, 1293
BssMI GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
BssNI GRCGYC 1 cut(s) 1357
BssT1I CCWWGG 1 cut(s) 817
Bst2UI CCWGG 3 cut(s) 695, 1271, 1294
Bst4CI ACNGT 3 cut(s) 166, 781, 949
Bst6I CTCTTC 5 cut(s) 534, 603, 1180, 1183, 1339
BstACI GRCGYC 1 cut(s) 1357
BstAPI GCANNNNNTGC 1 cut(s) 17
BstC8I GCNNGC 3 cut(s) 180, 1192, 1290
BstDEI CTNAG 2 cut(s) 131, 249
BstF5I GGATG 3 cut(s) 296, 706, 749
BstKTI GATC 9 cut(s) 505, 520, 547, 574, 596, 667, 679, 1005, 1125
BstMAI GTCTC 2 cut(s) 210, 1049
BstMBI GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
BstMWI GCNNNNNNNGC 9 cut(s) 17, 32, 132, 461, 833, 848, 991, 1085, 1298
BstNI CCWGG 3 cut(s) 695, 1271, 1294
BstNSI RCATGY 1 cut(s) 923
BstPAI GACNNNNGTC 1 cut(s) 143
BstSCI CCNGG 4 cut(s) 693, 1113, 1269, 1292
BstSFI CTRYAG 1 cut(s) 240
BstSLI GKGCMC 2 cut(s) 37, 1081
BstV1I GCAGC 2 cut(s) 733, 859
BstX2I RGATCY 2 cut(s) 544, 1002
BstXI CCANNNNNNTGG 1 cut(s) 44
BstYI RGATCY 2 cut(s) 544, 1002
BsuRI GGCC 2 cut(s) 985, 1239
BtsCI GGATG 3 cut(s) 296, 706, 749
BtsI GCAGTG 2 cut(s) 1125, 1162
BtsIMutI CAGTG 7 cut(s) 37, 171, 801, 852, 954, 1125, 1162
Cac8I GCNNGC 3 cut(s) 180, 1192, 1290
CaiI CAGNNNCTG 1 cut(s) 839
CciI TCATGA 2 cut(s) 82, 895
Cfr13I GGNCC 3 cut(s) 557, 983, 1108
Csp6I GTAC 1 cut(s) 923
CviAII CATG 4 cut(s) 83, 896, 920, 1069
CviQI GTAC 1 cut(s) 923
DdeI CTNAG 2 cut(s) 131, 249
DpnI GATC 9 cut(s) 504, 519, 546, 573, 595, 666, 678, 1004, 1124
DpnII GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
EaeI YGGCCR 1 cut(s) 1237
Eam1104I CTCTTC 5 cut(s) 534, 603, 1180, 1183, 1339
EarI CTCTTC 5 cut(s) 534, 603, 1180, 1183, 1339
Eco130I CCWWGG 1 cut(s) 817
Eco24I GRGCYC 1 cut(s) 624
Eco47I GGWCC 2 cut(s) 557, 1108
Eco57I CTGAAG 3 cut(s) 561, 582, 1164
Eco88I CYCGRG 1 cut(s) 1146
EcoRI GAATTC 1 cut(s) 1259
EcoRII CCWGG 3 cut(s) 693, 1269, 1292
EcoT14I CCWWGG 1 cut(s) 817
EcoT22I ATGCAT 1 cut(s) 724
EcoT38I GRGCYC 1 cut(s) 624
ErhI CCWWGG 1 cut(s) 817
FaeI CATG 4 cut(s) 86, 899, 923, 1072
FalI AAGNNNNNCTT 2 cut(s) 1162, 1194
FaqI GGGAC 1 cut(s) 1121
FatI CATG 4 cut(s) 82, 895, 919, 1068
FauI CCCGC 2 cut(s) 782, 1320
FauNDI CATATG 2 cut(s) 718, 937
Fnu4HI GCNGC 3 cut(s) 747, 873, 1368
FokI GGATG 3 cut(s) 303, 713, 736
FriOI GRGCYC 1 cut(s) 624
Fsp4HI GCNGC 3 cut(s) 747, 873, 1368
FspBI CTAG 2 cut(s) 344, 861
GluI GCNGC 3 cut(s) 747, 873, 1368
GsaI CCCAGC 1 cut(s) 629
GsuI CTGGAG 1 cut(s) 441
HaeIII GGCC 2 cut(s) 985, 1239
HapII CCGG 3 cut(s) 288, 1012, 1115
Hin1I GRCGYC 1 cut(s) 1357
Hin1II CATG 4 cut(s) 86, 899, 923, 1072
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HinfI GANTC 8 cut(s) 86, 119, 245, 254, 407, 643, 1029, 1333
HpaI GTTAAC 1 cut(s) 436
HpaII CCGG 3 cut(s) 288, 1012, 1115
HphI GGTGA 6 cut(s) 277, 878, 1083, 1090, 1286, 1342
Hpy166II GTNNAC 3 cut(s) 436, 1079, 1355
Hpy188I TCNGA 5 cut(s) 580, 642, 1200, 1265, 1338
Hpy8I GTNNAC 3 cut(s) 436, 1079, 1355
HpyAV CCTTC 6 cut(s) 352, 584, 585, 899, 958, 1164
HpyCH4III ACNGT 3 cut(s) 166, 781, 949
HpyCH4IV ACGT 1 cut(s) 1357
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 32, 132, 461, 833, 848, 991, 1085, 1298
HpyF3I CTNAG 2 cut(s) 131, 249
HpySE526I ACGT 1 cut(s) 1357
Hsp92I GRCGYC 1 cut(s) 1357
Hsp92II CATG 4 cut(s) 86, 899, 923, 1072
Kpn2I TCCGGA 1 cut(s) 1011
KspAI GTTAAC 1 cut(s) 436
Kzo9I GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
LguI GCTCTTC 1 cut(s) 1180
LmnI GCTCC 9 cut(s) 31, 61, 352, 460, 502, 619, 841, 862, 1298
Lsp1109I GCAGC 2 cut(s) 733, 859
LweI GCATC 8 cut(s) 20, 281, 450, 731, 758, 859, 860, 931
MaeI CTAG 2 cut(s) 344, 861
MaeII ACGT 1 cut(s) 1357
MaeIII GTNAC 4 cut(s) 166, 283, 908, 1202
MalI GATC 9 cut(s) 504, 519, 546, 573, 595, 666, 678, 1004, 1124
MboI GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
MboII GAAGA 9 cut(s) 71, 330, 551, 617, 620, 914, 1170, 1197, 1356
MfeI CAATTG 1 cut(s) 726
MflI RGATCY 2 cut(s) 544, 1002
MhlI GDGCHC 4 cut(s) 37, 457, 624, 1081
MluCI AATT 9 cut(s) 95, 195, 208, 323, 726, 928, 977, 1049, 1259
MlyI GAGTC 1 cut(s) 263
MmeI TCCRAC 1 cut(s) 692
Mph1103I ATGCAT 1 cut(s) 724
MroI TCCGGA 1 cut(s) 1011
MroXI GAANNNNTTC 1 cut(s) 1259
MseI TTAA 5 cut(s) 206, 374, 435, 972, 990
MspA1I CMGCKG 1 cut(s) 1327
MspI CCGG 3 cut(s) 288, 1012, 1115
MspR9I CCNGG 4 cut(s) 695, 1115, 1271, 1294
MunI CAATTG 1 cut(s) 726
MvaI CCWGG 3 cut(s) 695, 1271, 1294
MwoI GCNNNNNNNGC 9 cut(s) 17, 32, 132, 461, 833, 848, 991, 1085, 1298
NciI CCSGG 1 cut(s) 1115
NdeI CATATG 2 cut(s) 718, 937
NdeII GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
NlaIII CATG 4 cut(s) 86, 899, 923, 1072
NlaIV GGNNCC 3 cut(s) 621, 1004, 1109
NmuCI GTSAC 4 cut(s) 166, 283, 908, 1202
NsiI ATGCAT 1 cut(s) 724
NspI RCATGY 1 cut(s) 923
PaeR7I CTCGAG 1 cut(s) 1146
PagI TCATGA 2 cut(s) 82, 895
PciI ACATGT 1 cut(s) 919
PciSI GCTCTTC 1 cut(s) 1180
PdmI GAANNNNTTC 1 cut(s) 1259
PfeI GAWTC 7 cut(s) 86, 119, 245, 407, 643, 1029, 1333
PkrI GCNGC 3 cut(s) 748, 874, 1369
PleI GAGTC 1 cut(s) 262
PpsI GAGTC 1 cut(s) 262
PscI ACATGT 1 cut(s) 919
PshAI GACNNNNGTC 1 cut(s) 143
Psp6I CCWGG 3 cut(s) 693, 1269, 1292
PspFI CCCAGC 1 cut(s) 625
PspGI CCWGG 3 cut(s) 693, 1269, 1292
PspN4I GGNNCC 3 cut(s) 621, 1004, 1109
PspPI GGNCC 3 cut(s) 557, 983, 1108
PspXI VCTCGAGB 1 cut(s) 1146
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 839
PsuI RGATCY 2 cut(s) 544, 1002
RsaI GTAC 1 cut(s) 924
RsaNI GTAC 1 cut(s) 923
SapI GCTCTTC 1 cut(s) 1180
SaqAI TTAA 5 cut(s) 206, 374, 435, 972, 990
SatI GCNGC 3 cut(s) 747, 873, 1368
Sau3AI GATC 9 cut(s) 502, 517, 544, 571, 593, 664, 676, 1002, 1122
Sau96I GGNCC 3 cut(s) 557, 983, 1108
SchI GAGTC 1 cut(s) 263
ScrFI CCNGG 4 cut(s) 695, 1115, 1271, 1294
SduI GDGCHC 4 cut(s) 37, 457, 624, 1081
SfaNI GCATC 8 cut(s) 20, 281, 450, 731, 758, 859, 860, 931
SfcI CTRYAG 1 cut(s) 240
Sfr274I CTCGAG 1 cut(s) 1146
SinI GGWCC 2 cut(s) 557, 1108
SlaI CTCGAG 1 cut(s) 1146
SmlI CTYRAG 4 cut(s) 634, 959, 1082, 1146
SmoI CTYRAG 4 cut(s) 634, 959, 1082, 1146
Sse9I AATT 9 cut(s) 95, 195, 208, 323, 726, 928, 977, 1049, 1259
SsiI CCGC 5 cut(s) 775, 1111, 1327, 1367, 1375
SspI AATATT 1 cut(s) 68
SspMI CTAG 2 cut(s) 344, 861
StyD4I CCNGG 4 cut(s) 693, 1113, 1269, 1292
StyI CCWWGG 1 cut(s) 817
TaaI ACNGT 3 cut(s) 166, 781, 949
TaiI ACGT 1 cut(s) 1360
TaqI TCGA 2 cut(s) 1125, 1147
TasI AATT 9 cut(s) 95, 195, 208, 323, 726, 928, 977, 1049, 1259
TauI GCSGC 1 cut(s) 1370
TfiI GAWTC 7 cut(s) 86, 119, 245, 407, 643, 1029, 1333
Tru1I TTAA 5 cut(s) 206, 374, 435, 972, 990
Tru9I TTAA 5 cut(s) 206, 374, 435, 972, 990
TscAI CASTG 7 cut(s) 37, 171, 808, 852, 954, 1125, 1162
TseFI GTSAC 4 cut(s) 166, 283, 908, 1202
TseI GCWGC 2 cut(s) 746, 872
Tsp45I GTSAC 4 cut(s) 166, 283, 908, 1202
TspDTI ATGAA 7 cut(s) 71, 99, 420, 462, 603, 749, 1272
TspGWI ACGGA 3 cut(s) 752, 940, 1372
TspRI CASTG 7 cut(s) 37, 171, 808, 852, 954, 1125, 1162
VneI GTGCAC 1 cut(s) 1077
VpaK11BI GGWCC 2 cut(s) 557, 1108
XapI RAATTY 6 cut(s) 195, 323, 928, 977, 1049, 1259
XceI RCATGY 1 cut(s) 923
XcmI CCANNNNNNNNNTGG 2 cut(s) 427, 815
XhoI CTCGAG 1 cut(s) 1146
XmnI GAANNNNTTC 1 cut(s) 1259
XspI CTAG 2 cut(s) 344, 861
ZraI GACGTC 1 cut(s) 1358
Zsp2I ATGCAT 1 cut(s) 724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.