Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006824

Physical Location & Seq

Genomic Coordinates Forward (+)

64803185 .. 64812477

Gene Structure 9293 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005066

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGAGAAGAACGAGAATGGCGTCGTTGGGCAGCATGACATGTCCAAGCCTTCAAGGACGGACATGTTTGACCCATCATGGAACAACGAAGGGATTCTTGAAGTCGTCACTTTCTATAAGAGATACCCTAAACACATCGAGCCCTGTTTGCTCAAAGACTTCCAGAAGCTGCGATATGCATTAAGTCTCTATCGAATTACATATACACTAAATATGTTCGATTGTTGCATGACTTTGTCAACAGCCCAGACTAATGAACCGCATATTGTTCGCAAAGCCAAGGAGCTTCTCCAACTTTTAGCAGTAAACATTCCGGCGGATTATGCATTTCGACTCTTCAACGGAAAGGAATCTTACATCATCAAGATCGGGCATCAATACGGTGGCCTTTGCTCGGACTTCAGGATCAACAATGAGCAATTTTTTGAACGGAAGAGACTTCTCTGGGACTCCAAAGAAGCACTTGCAAAAGTCACATCCTGCAGTATTTTCATGCAAGATGAGATAGTTGTCATTGTTGGTAGAGCCGAAGGTGTGAAGATGGTCAGATCAGAGCCTGCAAAGCGAGGACATCCCAATTTAGAAAACACTTCATATCCATGTCAATTGGTATCAAATAGTAGAGGCACCAAGCCACCAAGGGATGGCAGCATCTTTGCTCTCTCCTCTTCTTCAAATCTACTCTCAACTACTTACTGTTCCTTGTCTCTTCAGCTTCACTTCAAGCCCCACAGATCTCTCTCTCTCTCCAAAGCCCAGATCACTTCCAAGCAGATAGCCATGCAAGAAGCAAAGTTGGCAAATCCTACCCTTCCTCCCAGTGCTCAGCTTGTTGGCAATGCCTTTGTGGAGCAATACTACCAAGTCCTTCACCACTCGCCAGAATTAGTGTATAAGTTTTATCAAGATTCAAGCGCTTTAAGCAGGACAGATATCAATGGCAATATGACAACAGTCAAAACCATGGATGCAATAAGGGTGAAAATTAAATCCTTAAATTACGAAGAGTATACAGCAGAAATAAAGACTGCAGATGCTCAGGAATCTTTTGAGAAAGGGGTGATTGTTTTAGTAACTGGATGCTTGACTGGAAAAGACAACGTGGGAAGGAAATTCACCCAAACGTTCTTCCTAGCTCCACAGGAAAATGGGTACTTCGTCTTAAATGATGTTTTTAGGTATATCGAGGACAATGAATCATCACAGACTAACAGTGTCCCGGTTAACACCATTGATGAAAGTGCTCCAGAAGCTGCCTTGATAGCAGAACCAGAACCTACTCAAGCTCCTGATCTTGTGGTGGAGGAACCTGCAAGTTCCTTGGATGACGATCCCAATAATGGACCTGAAGTTTGTGATCCTTCAGATAATGAGGAAGGATCAGTTATTGAAGAAGAGGTTGTGATAGAGGAGCCCCCAATTGAATCAAGTCAGAGTAGAGATCTTCCAGAAGTTGATCCAATCCCTGAAACCCAGGAGGATGCTCCGAAGAAATCATATGCATCAATTGTAAAGGTAATGAAAAGTAGCGTTGCATCCAGTCCTGTCCGTGTTTCCCGAGTGAGGACAGTATCTGCAAACACTGACCATCCATCCCTTGGTTCCGCAAAACCTTCTCCGGTACCAGAGGCATCAGCTCCTAGTGGTGATGCTGCTCCGGAGAGTAGCAATGCTCATGAGGAAGCTGAAGGTCACTCCATACATGTAAGGAATTTGCCGTATGATGCAACTGTCGAACAACTTGAGAAGGAGTTTAAGAAATTTGGGTCTATTAAGCGGGACGGGATCCAAGTCAGAAGTAGTAAGCAAGGATTCTGTTTTGGCTTTGTTGAATTTGAAAGCGTGAGTTCCATGCAAAGTGCACTTGAGGCTTCACCTATCATGATCGGCGATCGTCAAGCGGTGATTGAGGAAAAGAGAACCACAACCCGAGTTAGCAATGGTGGAAGAGGGAGGTTTTCTTCCGGAAGAGCTGGCTTCCGAAGTGACTCTTTCAGGGGTGGTCGTGGAAACTATGGTGGTAGCCGTAGCTTTGGAAGGAATGAATTCAGAAACCAGGGTGAGTTTTCACGATCCAAGTCATCGGCTGGACGCAATGGAGAGGGTTATCAGCGCGTCAATCCAAATGGAAGGGGTGGTGGTCGCCAAGGGGCAGCAAACAACCGCAGCTCTGTTCCTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

728

Amino Acids

80.37

Weight (kDa)

5.94

Isoelectric Point (pI)

51.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	41 - 114	2.3e-07	Krr1 KH1 domain
NTF2	PF02136	278 - 394	2e-31	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	568 - 624	1.3e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60980 AT5G60980 AT5G60980 AT5G60980
fragaria_vesca	FvH4_5g13730 FvH4_5g13730 FvH4_5g13730
malus_domestica	MD06G1226000.v1.1 MD14G1212900.v1.1
prunus_persica	Prupe.5G206200_v2.0.a1
pyrus_communis	pycom06g18040 pycom14g17650
rosa_chinensis	RchiOBHm_Chr7g0183211
rosa_laevigata	RLG00000005066
rosa_multiflora	Rmu_ssc0000111.1_g000020
rosa_roxburghii	Rroxscaffold_3G00270650
rosa_rugosa	Rorug06G0454900 Rorug06G0455000 Rorug06G0455100 Rorug06G0455200 Rorug06G0455200
rosa_samantha	Rh7AG057100 Rh7BG057000 Rh7CG058100 Rh7DG056900
rosa_wichuraiana	Rw7G004680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1318
Acc65I	GGTACC	1 cut(s)	1621
AccB1I	GGYRCC	2 cut(s)	626, 1621
AccB7I	CCANNNNNTGG	2 cut(s)	644, 1598
AccI	GTMKAC	1 cut(s)	1010
AccII	CGCG	1 cut(s)	2115
AccIII	TCCGGA	2 cut(s)	1657, 1964
AciI	CCGC	6 cut(s)	260, 317, 1605, 1777, 1901, 2164
AclI	AACGTT	1 cut(s)	1124
AclWI	GGATC	8 cut(s)	413, 1325, 1352, 1387, 1451, 1780, 1793, 2067
AcsI	RAATTY	5 cut(s)	1112, 1711, 1760, 1832, 2045
AcuI	CTGAAG	5 cut(s)	385, 695, 1347, 1368, 1707
AcyI	GRCGYC	1 cut(s)	21
AfaI	GTAC	2 cut(s)	1154, 1623
AfeI	AGCGCT	1 cut(s)	916
AfiI	CCNNNNNNNGG	5 cut(s)	394, 644, 1340, 1563, 1598
AflIII	ACRYGT	3 cut(s)	39, 63, 1702
AjnI	CCWGG	2 cut(s)	1473, 2055
Alw21I	GWGCWC	3 cut(s)	826, 1246, 1864
Alw26I	GTCTC	3 cut(s)	191, 430, 711
Alw44I	GTGCAC	1 cut(s)	1860
AlwI	GGATC	8 cut(s)	413, 1325, 1352, 1387, 1451, 1780, 1793, 2067
AlwNI	CAGNNNCTG	4 cut(s)	169, 557, 1253, 1574
Ama87I	CYCGRG	2 cut(s)	1557, 1929
Aor13HI	TCCGGA	2 cut(s)	1657, 1964
Aor51HI	AGCGCT	1 cut(s)	916
AoxI	GGCC	1 cut(s)	385
ApaLI	GTGCAC	1 cut(s)	1860
ApeKI	GCWGC	7 cut(s)	31, 169, 648, 1253, 1652, 2153, 2166
ApoI	RAATTY	5 cut(s)	1112, 1711, 1760, 1832, 2045
ArsI	GACNNNNNNTTYG	2 cut(s)	1335, 1367
Asp700I	GAANNNNTTC	2 cut(s)	93, 2045
Asp718I	GGTACC	1 cut(s)	1621
AspLEI	GCGC	2 cut(s)	917, 2115
AspS9I	GGNCC	1 cut(s)	1343
AsuC2I	CCSGG	1 cut(s)	1220
AsuHPI	GGTGA	8 cut(s)	863, 991, 1072, 1108, 1658, 1866, 1915, 2072
AvaI	CYCGRG	2 cut(s)	1557, 1929
AvaII	GGWCC	1 cut(s)	1343
BaeGI	GKGCMC	1 cut(s)	1864
BamHI	GGATCC	1 cut(s)	1785
BanI	GGYRCC	2 cut(s)	626, 1621
BanII	GRGCYC	2 cut(s)	144, 1416
Bbv12I	GWGCWC	3 cut(s)	826, 1246, 1864
BbvI	GCAGC	7 cut(s)	43, 156, 660, 1240, 1639, 2165, 2178
BccI	CCATC	5 cut(s)	82, 535, 638, 1596, 1600
BceAI	ACGGC	2 cut(s)	1702, 2010
BcgI	CGANNNNNNTGC	2 cut(s)	251, 285
BciT130I	CCWGG	2 cut(s)	1475, 2057
BcnI	CCSGG	1 cut(s)	1220
BcoDI	GTCTC	3 cut(s)	191, 430, 711
BfaI	CTAG	2 cut(s)	1133, 1641
BfmI	CTRYAG	2 cut(s)	481, 1029
BfoI	RGCGCY	1 cut(s)	918
BfuAI	ACCTGC	1 cut(s)	1318
BglII	AGATCT	2 cut(s)	734, 1441
BisI	GCNGC	7 cut(s)	32, 170, 649, 1254, 1653, 2154, 2167
BlpI	GCTNAGC	1 cut(s)	825
BlsI	GCNGC	7 cut(s)	33, 171, 650, 1255, 1654, 2155, 2168
Bme1390I	CCNGG	3 cut(s)	1220, 1475, 2057
Bme18I	GGWCC	1 cut(s)	1343
BmeT110I	CYCGRG	2 cut(s)	1557, 1929
BmgT120I	GGNCC	1 cut(s)	1343
BmiI	GGNNCC	6 cut(s)	628, 1308, 1413, 1603, 1623, 1787
BmrFI	CCNGG	3 cut(s)	1220, 1475, 2057
BmrI	ACTGGG	1 cut(s)	813
BmuI	ACTGGG	1 cut(s)	813
BoxI	GACNNNNGTC	1 cut(s)	953
BpmI	CTGGAG	1 cut(s)	1230
Bpu10I	CCTNAGC	1 cut(s)	1038
Bpu1102I	GCTNAGC	1 cut(s)	825
BpuEI	CTTGAG	3 cut(s)	1266, 1763, 1886
BpuMI	CCSGG	1 cut(s)	1220
BsaBI	GATNNNNATC	1 cut(s)	1329
BsaHI	GRCGYC	1 cut(s)	21
BsaJI	CCNNGG	8 cut(s)	279, 638, 963, 1320, 1473, 1597, 2056, 2146
BsaWI	WCCGGW	3 cut(s)	1618, 1657, 1964
BsaXI	ACNNNNNCTCC	4 cut(s)	799, 829, 1270, 1300
Bsc4I	CCNNNNNNNGG	5 cut(s)	394, 644, 1340, 1563, 1598
Bse1I	ACTGG	4 cut(s)	819, 1081, 1093, 1539
Bse3DI	GCAATG	4 cut(s)	844, 1675, 1945, 2101
Bse8I	GATNNNNATC	1 cut(s)	1329
BseAI	TCCGGA	2 cut(s)	1657, 1964
BseBI	CCWGG	2 cut(s)	1475, 2057
BseDI	CCNNGG	8 cut(s)	279, 638, 963, 1320, 1473, 1597, 2056, 2146
BseJI	GATNNNNATC	1 cut(s)	1329
BseLI	CCNNNNNNNGG	5 cut(s)	394, 644, 1340, 1563, 1598
BseMI	GCAATG	4 cut(s)	844, 1675, 1945, 2101
BseMII	CTCAG	2 cut(s)	839, 1052
BseNI	ACTGG	4 cut(s)	819, 1081, 1093, 1539
BseRI	GAGGAG	2 cut(s)	655, 1424
BseSI	GKGCMC	1 cut(s)	1864
BseXI	GCAGC	7 cut(s)	43, 156, 660, 1240, 1639, 2165, 2178
Bsh1236I	CGCG	1 cut(s)	2115
Bsh1285I	CGRYCG	1 cut(s)	1894
BshFI	GGCC	1 cut(s)	387
BshNI	GGYRCC	2 cut(s)	626, 1621
BsiEI	CGRYCG	1 cut(s)	1894
BsiHKAI	GWGCWC	3 cut(s)	826, 1246, 1864
BsiHKCI	CYCGRG	2 cut(s)	1557, 1929
BsiSI	CCGG	5 cut(s)	314, 1220, 1619, 1658, 1965
BslFI	GGGAC	3 cut(s)	461, 1202, 1793
BslI	CCNNNNNNNGG	5 cut(s)	394, 644, 1340, 1563, 1598
BsmAI	GTCTC	3 cut(s)	191, 430, 711
BsmFI	GGGAC	3 cut(s)	461, 1202, 1793
BsnI	GGCC	1 cut(s)	387
BsoBI	CYCGRG	2 cut(s)	1557, 1929
Bsp1286I	GDGCHC	5 cut(s)	144, 826, 1246, 1416, 1864
Bsp13I	TCCGGA	2 cut(s)	1657, 1964
Bsp1720I	GCTNAGC	1 cut(s)	825
Bsp19I	CCATGG	1 cut(s)	963
BspACI	CCGC	6 cut(s)	260, 317, 1605, 1777, 1901, 2164
BspANI	GGCC	1 cut(s)	387
BspCNI	CTCAG	2 cut(s)	838, 1051
BspEI	TCCGGA	2 cut(s)	1657, 1964
BspFNI	CGCG	1 cut(s)	2115
BspHI	TCATGA	2 cut(s)	1675, 1881
BspLI	GGNNCC	6 cut(s)	628, 1308, 1413, 1603, 1623, 1787
BspMAI	CTGCAG	2 cut(s)	485, 1033
BspMI	ACCTGC	1 cut(s)	1318
BspPI	GGATC	8 cut(s)	413, 1325, 1352, 1387, 1451, 1780, 1793, 2067
BspQI	GCTCTTC	1 cut(s)	1963
BspT107I	GGYRCC	2 cut(s)	626, 1621
BsrDI	GCAATG	4 cut(s)	844, 1675, 1945, 2101
BsrI	ACTGG	4 cut(s)	819, 1081, 1093, 1539
BssECI	CCNNGG	8 cut(s)	279, 638, 963, 1320, 1473, 1597, 2056, 2146
BssNAI	GTATAC	1 cut(s)	1011
BssNI	GRCGYC	1 cut(s)	21
BssT1I	CCWWGG	6 cut(s)	279, 638, 963, 1320, 1597, 2146
Bst1107I	GTATAC	1 cut(s)	1011
Bst2UI	CCWGG	2 cut(s)	1475, 2057
Bst4CI	ACNGT	6 cut(s)	383, 698, 955, 1214, 1570, 1732
Bst6I	CTCTTC	8 cut(s)	341, 428, 673, 714, 999, 1389, 1942, 1963
BstACI	GRCGYC	1 cut(s)	21
BstC8I	GCNNGC	2 cut(s)	558, 1975
BstDEI	CTNAG	2 cut(s)	825, 1038
BstDSI	CCRYGG	1 cut(s)	963
BstFNI	CGCG	1 cut(s)	2115
BstH2I	RGCGCY	1 cut(s)	918
BstHHI	GCGC	2 cut(s)	917, 2115
BstMAI	GTCTC	3 cut(s)	191, 430, 711
BstMCI	CGRYCG	1 cut(s)	1894
BstMWI	GCNNNNNNNGC	8 cut(s)	148, 323, 562, 797, 921, 1250, 1262, 1868
BstNI	CCWGG	2 cut(s)	1475, 2057
BstNSI	RCATGY	3 cut(s)	43, 67, 1706
BstPAI	GACNNNNGTC	1 cut(s)	953
BstSCI	CCNGG	3 cut(s)	1218, 1473, 2055
BstSFI	CTRYAG	2 cut(s)	481, 1029
BstSLI	GKGCMC	1 cut(s)	1864
BstUI	CGCG	1 cut(s)	2115
BstV1I	GCAGC	7 cut(s)	43, 156, 660, 1240, 1639, 2165, 2178
BstX2I	RGATCY	3 cut(s)	734, 1441, 1785
BstYI	RGATCY	3 cut(s)	734, 1441, 1785
BstZ17I	GTATAC	1 cut(s)	1011
BsuRI	GGCC	1 cut(s)	387
BtgI	CCRYGG	1 cut(s)	963
BtsIMutI	CAGTG	3 cut(s)	826, 1219, 1581
BveI	ACCTGC	1 cut(s)	1318
Cac8I	GCNNGC	2 cut(s)	558, 1975
CaiI	CAGNNNCTG	4 cut(s)	169, 557, 1253, 1574
CciI	TCATGA	2 cut(s)	1675, 1881
CfoI	GCGC	2 cut(s)	917, 2115
Cfr13I	GGNCC	1 cut(s)	1343
CseI	GACGC	3 cut(s)	10, 2100, 2104
Csp6I	GTAC	2 cut(s)	1153, 1622
CviQI	GTAC	2 cut(s)	1153, 1622
DdeI	CTNAG	2 cut(s)	825, 1038
Eam1104I	CTCTTC	8 cut(s)	341, 428, 673, 714, 999, 1389, 1942, 1963
EarI	CTCTTC	8 cut(s)	341, 428, 673, 714, 999, 1389, 1942, 1963
EciI	GGCGGA	1 cut(s)	332
Eco130I	CCWWGG	6 cut(s)	279, 638, 963, 1320, 1597, 2146
Eco24I	GRGCYC	2 cut(s)	144, 1416
Eco32I	GATATC	1 cut(s)	934
Eco47I	GGWCC	1 cut(s)	1343
Eco47III	AGCGCT	1 cut(s)	916
Eco57I	CTGAAG	5 cut(s)	385, 695, 1347, 1368, 1707
Eco88I	CYCGRG	2 cut(s)	1557, 1929
EcoRI	GAATTC	1 cut(s)	2045
EcoRII	CCWGG	2 cut(s)	1473, 2055
EcoRV	GATATC	1 cut(s)	934
EcoT14I	CCWWGG	6 cut(s)	279, 638, 963, 1320, 1597, 2146
EcoT22I	ATGCAT	3 cut(s)	181, 328, 1504
EcoT38I	GRGCYC	2 cut(s)	144, 1416
ErhI	CCWWGG	6 cut(s)	279, 638, 963, 1320, 1597, 2146
FalI	AAGNNNNNCTT	6 cut(s)	81, 113, 447, 479, 1975, 2007
FaqI	GGGAC	3 cut(s)	461, 1202, 1793
FauI	CCCGC	1 cut(s)	1770
FauNDI	CATATG	1 cut(s)	1498
FblI	GTMKAC	1 cut(s)	1010
Fnu4HI	GCNGC	7 cut(s)	32, 170, 649, 1254, 1653, 2154, 2167
FriOI	GRGCYC	2 cut(s)	144, 1416
Fsp4HI	GCNGC	7 cut(s)	32, 170, 649, 1254, 1653, 2154, 2167
FspBI	CTAG	2 cut(s)	1133, 1641
GlaI	GCGC	2 cut(s)	916, 2114
GluI	GCNGC	7 cut(s)	32, 170, 649, 1254, 1653, 2154, 2167
GsuI	CTGGAG	1 cut(s)	1230
HaeII	RGCGCY	1 cut(s)	918
HaeIII	GGCC	1 cut(s)	387
HapII	CCGG	5 cut(s)	314, 1220, 1619, 1658, 1965
HgaI	GACGC	3 cut(s)	10, 2100, 2104
HhaI	GCGC	2 cut(s)	917, 2115
Hin1I	GRCGYC	1 cut(s)	21
Hin6I	GCGC	2 cut(s)	915, 2113
HinP1I	GCGC	2 cut(s)	915, 2113
HincII	GTYRAC	2 cut(s)	240, 1225
HindII	GTYRAC	2 cut(s)	240, 1225
HpaI	GTTAAC	1 cut(s)	1225
HpaII	CCGG	5 cut(s)	314, 1220, 1619, 1658, 1965
HphI	GGTGA	8 cut(s)	863, 991, 1072, 1108, 1658, 1866, 1915, 2072
Hpy166II	GTNNAC	5 cut(s)	240, 307, 1011, 1225, 1862
Hpy188I	TCNGA	9 cut(s)	397, 548, 553, 1366, 1434, 1488, 1796, 1982, 2051
Hpy8I	GTNNAC	5 cut(s)	240, 307, 1011, 1225, 1862
Hpy99I	CGWCG	1 cut(s)	26
HpyCH4III	ACNGT	6 cut(s)	383, 698, 955, 1214, 1570, 1732
HpyCH4IV	ACGT	2 cut(s)	1101, 1124
HpyF10VI	GCNNNNNNNGC	8 cut(s)	148, 323, 562, 797, 921, 1250, 1262, 1868
HpyF3I	CTNAG	2 cut(s)	825, 1038
HpySE526I	ACGT	2 cut(s)	1101, 1124
Hsp92I	GRCGYC	1 cut(s)	21
HspAI	GCGC	2 cut(s)	915, 2113
Kpn2I	TCCGGA	2 cut(s)	1657, 1964
KpnI	GGTACC	1 cut(s)	1625
KspAI	GTTAAC	1 cut(s)	1225
LguI	GCTCTTC	1 cut(s)	1963
LmnI	GCTCC	9 cut(s)	283, 850, 1141, 1249, 1291, 1411, 1489, 1642, 1660
Lsp1109I	GCAGC	7 cut(s)	43, 156, 660, 1240, 1639, 2165, 2178
MaeI	CTAG	2 cut(s)	1133, 1641
MaeII	ACGT	2 cut(s)	1101, 1124
MaeIII	GTNAC	5 cut(s)	106, 472, 1072, 1691, 1985
MfeI	CAATTG	3 cut(s)	605, 1419, 1506
MflI	RGATCY	3 cut(s)	734, 1441, 1785
MhlI	GDGCHC	5 cut(s)	144, 826, 1246, 1416, 1864
MlyI	GAGTC	3 cut(s)	327, 443, 1982
MmeI	TCCRAC	1 cut(s)	316
Mph1103I	ATGCAT	3 cut(s)	181, 328, 1504
MroI	TCCGGA	2 cut(s)	1657, 1964
MroXI	GAANNNNTTC	2 cut(s)	93, 2045
MseI	TTAA	8 cut(s)	182, 920, 987, 995, 1163, 1224, 1755, 1773
MslI	CAYNNNNRTG	1 cut(s)	598
MspI	CCGG	5 cut(s)	314, 1220, 1619, 1658, 1965
MspR9I	CCNGG	3 cut(s)	1220, 1475, 2057
MunI	CAATTG	3 cut(s)	605, 1419, 1506
MvaI	CCWGG	2 cut(s)	1475, 2057
MvnI	CGCG	1 cut(s)	2115
MwoI	GCNNNNNNNGC	8 cut(s)	148, 323, 562, 797, 921, 1250, 1262, 1868
NciI	CCSGG	1 cut(s)	1220
NcoI	CCATGG	1 cut(s)	963
NdeI	CATATG	1 cut(s)	1498
NlaIV	GGNNCC	6 cut(s)	628, 1308, 1413, 1603, 1623, 1787
NmuCI	GTSAC	4 cut(s)	106, 472, 1691, 1985
NsiI	ATGCAT	3 cut(s)	181, 328, 1504
NspI	RCATGY	3 cut(s)	43, 67, 1706
PagI	TCATGA	2 cut(s)	1675, 1881
PciI	ACATGT	3 cut(s)	39, 63, 1702
PciSI	GCTCTTC	1 cut(s)	1963
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PdmI	GAANNNNTTC	2 cut(s)	93, 2045
PfeI	GAWTC	7 cut(s)	94, 350, 908, 1043, 1196, 1424, 1812
PflFI	GACNNNGTC	1 cut(s)	235
PflMI	CCANNNNNTGG	2 cut(s)	644, 1598
PkrI	GCNGC	7 cut(s)	33, 171, 650, 1255, 1654, 2155, 2168
Ple19I	CGATCG	1 cut(s)	1894
PleI	GAGTC	3 cut(s)	327, 443, 1982
PpsI	GAGTC	3 cut(s)	327, 443, 1982
PscI	ACATGT	3 cut(s)	39, 63, 1702
PshAI	GACNNNNGTC	1 cut(s)	953
Psp1406I	AACGTT	1 cut(s)	1124
Psp6I	CCWGG	2 cut(s)	1473, 2055
PspGI	CCWGG	2 cut(s)	1473, 2055
PspN4I	GGNNCC	6 cut(s)	628, 1308, 1413, 1603, 1623, 1787
PspPI	GGNCC	1 cut(s)	1343
PstI	CTGCAG	2 cut(s)	485, 1033
PstNI	CAGNNNCTG	4 cut(s)	169, 557, 1253, 1574
PsuI	RGATCY	3 cut(s)	734, 1441, 1785
PsyI	GACNNNGTC	1 cut(s)	235
PvuI	CGATCG	1 cut(s)	1894
RsaI	GTAC	2 cut(s)	1154, 1623
RsaNI	GTAC	2 cut(s)	1153, 1622
RseI	CAYNNNNRTG	1 cut(s)	598
SapI	GCTCTTC	1 cut(s)	1963
SaqAI	TTAA	8 cut(s)	182, 920, 987, 995, 1163, 1224, 1755, 1773
SatI	GCNGC	7 cut(s)	32, 170, 649, 1254, 1653, 2154, 2167
Sau96I	GGNCC	1 cut(s)	1343
SchI	GAGTC	3 cut(s)	327, 443, 1982
ScrFI	CCNGG	3 cut(s)	1220, 1475, 2057
SduI	GDGCHC	5 cut(s)	144, 826, 1246, 1416, 1864
SfcI	CTRYAG	2 cut(s)	481, 1029
SinI	GGWCC	1 cut(s)	1343
SmiMI	CAYNNNNRTG	1 cut(s)	598
SmlI	CTYRAG	3 cut(s)	1281, 1742, 1865
SmoI	CTYRAG	3 cut(s)	1281, 1742, 1865
SsiI	CCGC	6 cut(s)	260, 317, 1605, 1777, 1901, 2164
SspMI	CTAG	2 cut(s)	1133, 1641
StyD4I	CCNGG	3 cut(s)	1218, 1473, 2055
StyI	CCWWGG	6 cut(s)	279, 638, 963, 1320, 1597, 2146
TaaI	ACNGT	6 cut(s)	383, 698, 955, 1214, 1570, 1732
TaiI	ACGT	2 cut(s)	1104, 1127
TaqI	TCGA	6 cut(s)	138, 193, 219, 331, 1185, 1734
TfiI	GAWTC	7 cut(s)	94, 350, 908, 1043, 1196, 1424, 1812
Tru1I	TTAA	8 cut(s)	182, 920, 987, 995, 1163, 1224, 1755, 1773
Tru9I	TTAA	8 cut(s)	182, 920, 987, 995, 1163, 1224, 1755, 1773
TscAI	CASTG	3 cut(s)	826, 1219, 1588
TseFI	GTSAC	4 cut(s)	106, 472, 1691, 1985
TseI	GCWGC	7 cut(s)	31, 169, 648, 1253, 1652, 2153, 2166
Tsp45I	GTSAC	4 cut(s)	106, 472, 1691, 1985
TspDTI	ATGAA	7 cut(s)	270, 481, 582, 1209, 1251, 1535, 2058
TspGWI	ACGGA	4 cut(s)	74, 357, 445, 1538
TspRI	CASTG	3 cut(s)	826, 1219, 1588
Tth111I	GACNNNGTC	1 cut(s)	235
Van91I	CCANNNNNTGG	2 cut(s)	644, 1598
VneI	GTGCAC	1 cut(s)	1860
VpaK11BI	GGWCC	1 cut(s)	1343
XapI	RAATTY	5 cut(s)	1112, 1711, 1760, 1832, 2045
XceI	RCATGY	3 cut(s)	43, 67, 1706
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1595
XmiI	GTMKAC	1 cut(s)	1010
XmnI	GAANNNNTTC	2 cut(s)	93, 2045
XspI	CTAG	2 cut(s)	1133, 1641
Zsp2I	ATGCAT	3 cut(s)	181, 328, 1504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.