Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0006824

Physical Location & Seq

Genomic Coordinates Reverse (-)

4209230 .. 4220497

Gene Structure 11268 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG058100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGAGAAGAACGAGAATGGCGTCGTTGGGCAGCATGACATGTCCAAGCCTTCAAGGTTTGACCCATCATGGAACGAAGAAGGGATTCTTGAAGTCGTCACCTTCTATAAGAGATACCCTAAACACATCGAGCCCTCTTTGCTCAAAGACTTCCAGAAGCTGCGATATGCATTAAGTCTCTATCGAATTACATATACACTAAATATGTTCGATTGTTGCATCACTTTGTCAACAGCCAGGACTAATGAACCGCATATTGTTCGCAAAGCCAAGGAGCTTCTCCAACTTTTAGCAGTAAACATTCCGGCGGATTATGCATTTCGACTCTTCAACGGAAAGGAATCTTACATCATCAAGATCGGGCATCAATACGGTGGCCTTTGCTCAGACTTCAGGATCAACAATGAGCAATTTTTTGAACGGAAGAGACTTCTCTGGGACTCCAAAGAGGCACTTGCACAAGTCACATCCTGCAGTATTTTCATGCAAGATGAGATAGTTGTCATTGTTGGTAGAGCCGAAGGTGTGAAGATGGTTAGCTTCACTTCAAGCCCCACAGATCTCTCTCCTTCCAGAGCCCAGATCACTTCCAAGCAGATAGCCATGCAAGAAGCAAAGTTGGCAAATCCTACCCTTCCTCCCAGTGCTCAGCTTGTCGGCAATGCCTTTGTGGAGCAATACTACCAAGTCCTTCACCACTCGCCAGAATTAGTGTATAAGTTTTATCAAGATTCAAGCGCTTTAAGCAGGACAGATATCAATGGCAATATGACAACAGTCAAAACCATGGATGCAATAAGGGTAAAAATTAAATCCTTAAATTACGAAGAGTATACAGCAGAAATAAAGACTGCAGATGCTCAGGAATCTTTTGAGAAAGGGGTGATTGTTTTAGTAACTGGATGCTTGACTGGAAAAGACAACGTGGGAAGGAAATTCACCCAAACGTTCTTCCTAGCTCCACAGGAAAATGGGTACTTTGTCTTAAATGATGTTTTTAGGTATATCGAGGACAATGAATCATCACAGACTAACAGTGTCCCGGTTAACACCATTGATGAAAGTGCTCCAGAAGCTGCCTTGATAGCAGAACCAGAACCTACTCAAGCTCCTGATCATCTTGTGGTGGAGGAACCTGCAAGTTCCTTGGATGAGGATCCCAATAATGGACCTGAAGTTTGTGATCCTTCAGATAATGAGGAAGGATCAGTTATTGAAGAAGAGGTTGTGATAGAGGAGCCCCCAATTGAATCAAGTCAGAGTAGAGATCTTCCAGAAGTTGATCCAATCCCTGAAACCCAGGAGGATGCTCCGAAGAAATCATATGCATCAATTTTAAAGGTAATGAAAAGTAGCGTCGCATTCAGTCCTGTCCGTGATGCCCGAGTGAGGACAGTATCTGCAAACACTGACCATCCATCCCTTGGTTCCGCAAAACCTTCTCTGGTACCAGAGGCATCAGCTCCTAGTGGTGATGCTGCTCCAGAAAGTAGCAATGCTCATGAGGAAGCTGAAGGTCACTCCATACATGTAAGGAATTTGCCATATGATGCAACTGTCGAACAACTTGAGAAGGAGTTTAAGAAATTTGGGTCTATTAAGCGGGACGGGATACAAGTCAGAAGTAGTAAGCAAGGATTCTGTTTCGGCTTTGTTGAATTTGAAAGCGTGAGTTCCATGCAAAGTGCACTTGAGGCTTCACCTATCGTGATCGGCGATCGTCAAGCAGTGATTGAGGAAAAGAGAACCACAACCCGAGTTAGCAATGGTGGAAGAGGGAGGTTTTCTTCCGGAAGAGCTGGCTTCCGAAGTGACTCTTTCAGGGGTGGTCGTGGAAACTATGGTGGTAGCCGTAGCTTTGGAAGGAATGAGTTCAGAAACCAGGGTGAGTTTTCACGATCCAAGTCATCGGCTGGACGCAATGGAGAGGGTTATCAGCGCGTCAATCCAAATGGAAGGGGTGGTGGTCGCCAAGGGGCAGCAAACAACCGCAGCTCTGTTCCTACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006508 GO:0006807 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0010494 GO:0016236 GO:0016579 GO:0019538 GO:0032386 GO:0032879 GO:0032991 GO:0034517 GO:0035770 GO:0035973 GO:0036211 GO:0036464 GO:0043021 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0050789 GO:0050794 GO:0051049 GO:0060341 GO:0060627 GO:0060628 GO:0061912 GO:0061919 GO:0065007 GO:0070646 GO:0070647 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1905538 GO:1990861 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NTF2 RRM_1

Protein Analysis

669

Amino Acids

74.04

Weight (kDa)

5.41

Isoelectric Point (pI)

53.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_KRR1_1st	PF17903	38 - 111	6e-08	Krr1 KH1 domain
NTF2	PF02136	219 - 335	1.7e-31	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	510 - 566	1.5e-11	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006824)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G60980 AT5G60980 AT5G60980 AT5G60980
fragaria_vesca	FvH4_5g13730 FvH4_5g13730 FvH4_5g13730
malus_domestica	MD06G1226000.v1.1 MD14G1212900.v1.1
prunus_persica	Prupe.5G206200_v2.0.a1
pyrus_communis	pycom06g18040 pycom14g17650
rosa_chinensis	RchiOBHm_Chr7g0183211
rosa_laevigata	RLG00000005066
rosa_multiflora	Rmu_ssc0000111.1_g000020
rosa_roxburghii	Rroxscaffold_3G00270650
rosa_rugosa	Rorug06G0454900 Rorug06G0455000 Rorug06G0455100 Rorug06G0455200 Rorug06G0455200
rosa_samantha	Rh7AG057100 Rh7BG057000 Rh7CG058100 Rh7DG056900
rosa_wichuraiana	Rw7G004680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1144
Acc65I	GGTACC	1 cut(s)	1447
AccB1I	GGYRCC	1 cut(s)	1447
AccB7I	CCANNNNNTGG	1 cut(s)	1424
AccI	GTMKAC	1 cut(s)	833
AccII	CGCG	1 cut(s)	1941
AccIII	TCCGGA	1 cut(s)	1790
AciI	CCGC	5 cut(s)	251, 308, 1431, 1603, 1990
AclI	AACGTT	1 cut(s)	947
AclWI	GGATC	7 cut(s)	404, 1151, 1164, 1178, 1213, 1277, 1893
AcsI	RAATTY	4 cut(s)	935, 1537, 1586, 1658
AcuI	CTGAAG	4 cut(s)	376, 1173, 1194, 1533
AcyI	GRCGYC	1 cut(s)	21
AfaI	GTAC	2 cut(s)	977, 1449
AfeI	AGCGCT	1 cut(s)	739
AfiI	CCNNNNNNNGG	3 cut(s)	1166, 1389, 1424
AflIII	ACRYGT	2 cut(s)	39, 1528
AjnI	CCWGG	3 cut(s)	236, 1299, 1881
Alw21I	GWGCWC	3 cut(s)	649, 1069, 1690
Alw26I	GTCTC	2 cut(s)	182, 421
Alw44I	GTGCAC	1 cut(s)	1686
AlwI	GGATC	7 cut(s)	404, 1151, 1164, 1178, 1213, 1277, 1893
AlwNI	CAGNNNCTG	3 cut(s)	160, 1076, 1400
Ama87I	CYCGRG	2 cut(s)	1383, 1755
Aor13HI	TCCGGA	1 cut(s)	1790
Aor51HI	AGCGCT	1 cut(s)	739
AoxI	GGCC	1 cut(s)	376
ApaLI	GTGCAC	1 cut(s)	1686
ApeKI	GCWGC	6 cut(s)	31, 160, 1076, 1478, 1979, 1992
ApoI	RAATTY	4 cut(s)	935, 1537, 1586, 1658
ArsI	GACNNNNNNTTYG	2 cut(s)	1161, 1193
Asp700I	GAANNNNTTC	2 cut(s)	84, 1871
Asp718I	GGTACC	1 cut(s)	1447
AspLEI	GCGC	2 cut(s)	740, 1941
AspS9I	GGNCC	1 cut(s)	1169
AsuC2I	CCSGG	1 cut(s)	1043
AsuHPI	GGTGA	7 cut(s)	91, 686, 895, 931, 1484, 1692, 1898
AvaI	CYCGRG	2 cut(s)	1383, 1755
AvaII	GGWCC	1 cut(s)	1169
BaeGI	GKGCMC	1 cut(s)	1690
BamHI	GGATCC	1 cut(s)	1156
BanI	GGYRCC	1 cut(s)	1447
BanII	GRGCYC	3 cut(s)	135, 580, 1242
Bbv12I	GWGCWC	3 cut(s)	649, 1069, 1690
BbvI	GCAGC	6 cut(s)	43, 147, 1063, 1465, 1991, 2004
BccI	CCATC	4 cut(s)	73, 526, 1422, 1426
BceAI	ACGGC	1 cut(s)	1836
BcgI	CGANNNNNNTGC	2 cut(s)	242, 276
BciT130I	CCWGG	3 cut(s)	238, 1301, 1883
BciVI	GTATCC	1 cut(s)	1605
BclI	TGATCA	1 cut(s)	1114
BcnI	CCSGG	1 cut(s)	1043
BcoDI	GTCTC	2 cut(s)	182, 421
BfaI	CTAG	2 cut(s)	956, 1467
BfmI	CTRYAG	2 cut(s)	472, 852
BfoI	RGCGCY	1 cut(s)	741
BfuAI	ACCTGC	1 cut(s)	1144
BfuI	GTATCC	1 cut(s)	1605
BglII	AGATCT	2 cut(s)	559, 1267
BisI	GCNGC	6 cut(s)	32, 161, 1077, 1479, 1980, 1993
BlpI	GCTNAGC	1 cut(s)	648
BlsI	GCNGC	6 cut(s)	33, 162, 1078, 1480, 1981, 1994
Bme1390I	CCNGG	4 cut(s)	238, 1043, 1301, 1883
Bme18I	GGWCC	1 cut(s)	1169
BmeT110I	CYCGRG	2 cut(s)	1383, 1755
BmgT120I	GGNCC	1 cut(s)	1169
BmiI	GGNNCC	5 cut(s)	1134, 1158, 1239, 1429, 1449
BmrFI	CCNGG	4 cut(s)	238, 1043, 1301, 1883
BmrI	ACTGGG	1 cut(s)	636
BmuI	ACTGGG	1 cut(s)	636
BoxI	GACNNNNGTC	1 cut(s)	776
BpmI	CTGGAG	2 cut(s)	1053, 1467
Bpu10I	CCTNAGC	1 cut(s)	861
Bpu1102I	GCTNAGC	1 cut(s)	648
BpuEI	CTTGAG	3 cut(s)	1089, 1589, 1712
BpuMI	CCSGG	1 cut(s)	1043
BsaBI	GATNNNNATC	1 cut(s)	1155
BsaHI	GRCGYC	1 cut(s)	21
BsaJI	CCNNGG	7 cut(s)	270, 786, 1146, 1299, 1423, 1882, 1972
BsaWI	WCCGGW	1 cut(s)	1790
BsaXI	ACNNNNNCTCC	4 cut(s)	622, 652, 1093, 1123
Bsc4I	CCNNNNNNNGG	3 cut(s)	1166, 1389, 1424
Bse1I	ACTGG	3 cut(s)	642, 904, 916
Bse3DI	GCAATG	4 cut(s)	667, 1501, 1771, 1927
Bse8I	GATNNNNATC	1 cut(s)	1155
BseAI	TCCGGA	1 cut(s)	1790
BseBI	CCWGG	3 cut(s)	238, 1301, 1883
BseDI	CCNNGG	7 cut(s)	270, 786, 1146, 1299, 1423, 1882, 1972
BseGI	GGATG	7 cut(s)	467, 796, 908, 1156, 1312, 1414, 1418
BseJI	GATNNNNATC	1 cut(s)	1155
BseLI	CCNNNNNNNGG	3 cut(s)	1166, 1389, 1424
BseMI	GCAATG	4 cut(s)	667, 1501, 1771, 1927
BseMII	CTCAG	3 cut(s)	399, 662, 875
BseNI	ACTGG	3 cut(s)	642, 904, 916
BseRI	GAGGAG	1 cut(s)	1250
BseSI	GKGCMC	1 cut(s)	1690
BseXI	GCAGC	6 cut(s)	43, 147, 1063, 1465, 1991, 2004
Bsh1236I	CGCG	1 cut(s)	1941
Bsh1285I	CGRYCG	1 cut(s)	1720
BshFI	GGCC	1 cut(s)	378
BshNI	GGYRCC	1 cut(s)	1447
BsiEI	CGRYCG	1 cut(s)	1720
BsiHKAI	GWGCWC	3 cut(s)	649, 1069, 1690
BsiHKCI	CYCGRG	2 cut(s)	1383, 1755
BsiSI	CCGG	3 cut(s)	305, 1043, 1791
BslFI	GGGAC	3 cut(s)	452, 1025, 1619
BslI	CCNNNNNNNGG	3 cut(s)	1166, 1389, 1424
BsmAI	GTCTC	2 cut(s)	182, 421
BsmFI	GGGAC	3 cut(s)	452, 1025, 1619
BsmI	GAATGC	1 cut(s)	1361
BsnI	GGCC	1 cut(s)	378
BsoBI	CYCGRG	2 cut(s)	1383, 1755
Bsp1286I	GDGCHC	6 cut(s)	135, 580, 649, 1069, 1242, 1690
Bsp13I	TCCGGA	1 cut(s)	1790
Bsp1720I	GCTNAGC	1 cut(s)	648
Bsp19I	CCATGG	1 cut(s)	786
BspACI	CCGC	5 cut(s)	251, 308, 1431, 1603, 1990
BspANI	GGCC	1 cut(s)	378
BspCNI	CTCAG	3 cut(s)	398, 661, 874
BspEI	TCCGGA	1 cut(s)	1790
BspFNI	CGCG	1 cut(s)	1941
BspHI	TCATGA	1 cut(s)	1501
BspLI	GGNNCC	5 cut(s)	1134, 1158, 1239, 1429, 1449
BspMAI	CTGCAG	2 cut(s)	476, 856
BspMI	ACCTGC	1 cut(s)	1144
BspPI	GGATC	7 cut(s)	404, 1151, 1164, 1178, 1213, 1277, 1893
BspQI	GCTCTTC	1 cut(s)	1789
BspT107I	GGYRCC	1 cut(s)	1447
BsrDI	GCAATG	4 cut(s)	667, 1501, 1771, 1927
BsrI	ACTGG	3 cut(s)	642, 904, 916
BssECI	CCNNGG	7 cut(s)	270, 786, 1146, 1299, 1423, 1882, 1972
BssNAI	GTATAC	1 cut(s)	834
BssNI	GRCGYC	1 cut(s)	21
BssT1I	CCWWGG	5 cut(s)	270, 786, 1146, 1423, 1972
Bst1107I	GTATAC	1 cut(s)	834
Bst2UI	CCWGG	3 cut(s)	238, 1301, 1883
Bst4CI	ACNGT	5 cut(s)	374, 778, 1037, 1396, 1558
Bst6I	CTCTTC	6 cut(s)	332, 419, 822, 1215, 1768, 1789
BstACI	GRCGYC	1 cut(s)	21
BstC8I	GCNNGC	1 cut(s)	1801
BstDEI	CTNAG	3 cut(s)	385, 648, 861
BstDSI	CCRYGG	1 cut(s)	786
BstF5I	GGATG	7 cut(s)	467, 796, 908, 1156, 1312, 1414, 1418
BstFNI	CGCG	1 cut(s)	1941
BstH2I	RGCGCY	1 cut(s)	741
BstHHI	GCGC	2 cut(s)	740, 1941
BstMAI	GTCTC	2 cut(s)	182, 421
BstMCI	CGRYCG	1 cut(s)	1720
BstMWI	GCNNNNNNNGC	7 cut(s)	139, 314, 620, 744, 1073, 1085, 1694
BstNI	CCWGG	3 cut(s)	238, 1301, 1883
BstNSI	RCATGY	2 cut(s)	43, 1532
BstPAI	GACNNNNGTC	1 cut(s)	776
BstSCI	CCNGG	4 cut(s)	236, 1041, 1299, 1881
BstSFI	CTRYAG	2 cut(s)	472, 852
BstSLI	GKGCMC	1 cut(s)	1690
BstUI	CGCG	1 cut(s)	1941
BstV1I	GCAGC	6 cut(s)	43, 147, 1063, 1465, 1991, 2004
BstX2I	RGATCY	3 cut(s)	559, 1156, 1267
BstYI	RGATCY	3 cut(s)	559, 1156, 1267
BstZ17I	GTATAC	1 cut(s)	834
BsuI	GTATCC	1 cut(s)	1605
BsuRI	GGCC	1 cut(s)	378
BtgI	CCRYGG	1 cut(s)	786
BtsCI	GGATG	7 cut(s)	467, 796, 908, 1156, 1312, 1414, 1418
BtsI	GCAGTG	1 cut(s)	1734
BtsIMutI	CAGTG	4 cut(s)	649, 1042, 1407, 1734
BveI	ACCTGC	1 cut(s)	1144
Cac8I	GCNNGC	1 cut(s)	1801
CaiI	CAGNNNCTG	3 cut(s)	160, 1076, 1400
CciI	TCATGA	1 cut(s)	1501
CfoI	GCGC	2 cut(s)	740, 1941
Cfr13I	GGNCC	1 cut(s)	1169
CseI	GACGC	4 cut(s)	10, 1345, 1926, 1930
Csp6I	GTAC	2 cut(s)	976, 1448
CviAII	CATG	9 cut(s)	35, 40, 69, 484, 604, 787, 1502, 1529, 1678
CviQI	GTAC	2 cut(s)	976, 1448
DdeI	CTNAG	3 cut(s)	385, 648, 861
DraI	TTTAAA	1 cut(s)	1338
Eam1104I	CTCTTC	6 cut(s)	332, 419, 822, 1215, 1768, 1789
EarI	CTCTTC	6 cut(s)	332, 419, 822, 1215, 1768, 1789
EciI	GGCGGA	1 cut(s)	323
Eco130I	CCWWGG	5 cut(s)	270, 786, 1146, 1423, 1972
Eco24I	GRGCYC	3 cut(s)	135, 580, 1242
Eco32I	GATATC	1 cut(s)	757
Eco47I	GGWCC	1 cut(s)	1169
Eco47III	AGCGCT	1 cut(s)	739
Eco57I	CTGAAG	4 cut(s)	376, 1173, 1194, 1533
Eco88I	CYCGRG	2 cut(s)	1383, 1755
EcoRII	CCWGG	3 cut(s)	236, 1299, 1881
EcoRV	GATATC	1 cut(s)	757
EcoT14I	CCWWGG	5 cut(s)	270, 786, 1146, 1423, 1972
EcoT22I	ATGCAT	3 cut(s)	172, 319, 1330
EcoT38I	GRGCYC	3 cut(s)	135, 580, 1242
ErhI	CCWWGG	5 cut(s)	270, 786, 1146, 1423, 1972
FaeI	CATG	9 cut(s)	38, 43, 72, 487, 607, 790, 1505, 1532, 1681
FalI	AAGNNNNNCTT	6 cut(s)	72, 104, 438, 470, 1801, 1833
FaqI	GGGAC	3 cut(s)	452, 1025, 1619
FatI	CATG	9 cut(s)	34, 39, 68, 483, 603, 786, 1501, 1528, 1677
FauI	CCCGC	1 cut(s)	1596
FauNDI	CATATG	2 cut(s)	1324, 1546
FbaI	TGATCA	1 cut(s)	1114
FblI	GTMKAC	1 cut(s)	833
Fnu4HI	GCNGC	6 cut(s)	32, 161, 1077, 1479, 1980, 1993
FokI	GGATG	7 cut(s)	454, 803, 915, 1163, 1319, 1401, 1405
FriOI	GRGCYC	3 cut(s)	135, 580, 1242
Fsp4HI	GCNGC	6 cut(s)	32, 161, 1077, 1479, 1980, 1993
FspBI	CTAG	2 cut(s)	956, 1467
GlaI	GCGC	2 cut(s)	739, 1940
GluI	GCNGC	6 cut(s)	32, 161, 1077, 1479, 1980, 1993
GsuI	CTGGAG	2 cut(s)	1053, 1467
HaeII	RGCGCY	1 cut(s)	741
HaeIII	GGCC	1 cut(s)	378
HapII	CCGG	3 cut(s)	305, 1043, 1791
HgaI	GACGC	4 cut(s)	10, 1345, 1926, 1930
HhaI	GCGC	2 cut(s)	740, 1941
Hin1I	GRCGYC	1 cut(s)	21
Hin1II	CATG	9 cut(s)	38, 43, 72, 487, 607, 790, 1505, 1532, 1681
Hin6I	GCGC	2 cut(s)	738, 1939
HinP1I	GCGC	2 cut(s)	738, 1939
HincII	GTYRAC	2 cut(s)	231, 1048
HindII	GTYRAC	2 cut(s)	231, 1048
HpaI	GTTAAC	1 cut(s)	1048
HpaII	CCGG	3 cut(s)	305, 1043, 1791
HphI	GGTGA	7 cut(s)	91, 686, 895, 931, 1484, 1692, 1898
Hpy166II	GTNNAC	5 cut(s)	231, 298, 834, 1048, 1688
Hpy188I	TCNGA	7 cut(s)	388, 1192, 1260, 1314, 1622, 1808, 1877
Hpy8I	GTNNAC	5 cut(s)	231, 298, 834, 1048, 1688
Hpy99I	CGWCG	2 cut(s)	26, 1361
HpyCH4III	ACNGT	5 cut(s)	374, 778, 1037, 1396, 1558
HpyCH4IV	ACGT	2 cut(s)	924, 947
HpyF10VI	GCNNNNNNNGC	7 cut(s)	139, 314, 620, 744, 1073, 1085, 1694
HpyF3I	CTNAG	3 cut(s)	385, 648, 861
HpySE526I	ACGT	2 cut(s)	924, 947
Hsp92I	GRCGYC	1 cut(s)	21
Hsp92II	CATG	9 cut(s)	38, 43, 72, 487, 607, 790, 1505, 1532, 1681
HspAI	GCGC	2 cut(s)	738, 1939
Kpn2I	TCCGGA	1 cut(s)	1790
KpnI	GGTACC	1 cut(s)	1451
Ksp22I	TGATCA	1 cut(s)	1114
KspAI	GTTAAC	1 cut(s)	1048
LguI	GCTCTTC	1 cut(s)	1789
LmnI	GCTCC	9 cut(s)	274, 673, 964, 1072, 1114, 1237, 1315, 1468, 1486
Lsp1109I	GCAGC	6 cut(s)	43, 147, 1063, 1465, 1991, 2004
MaeI	CTAG	2 cut(s)	956, 1467
MaeII	ACGT	2 cut(s)	924, 947
MaeIII	GTNAC	5 cut(s)	97, 463, 895, 1517, 1811
MfeI	CAATTG	1 cut(s)	1245
MflI	RGATCY	3 cut(s)	559, 1156, 1267
MhlI	GDGCHC	6 cut(s)	135, 580, 649, 1069, 1242, 1690
MlyI	GAGTC	3 cut(s)	318, 434, 1808
MmeI	TCCRAC	1 cut(s)	307
Mph1103I	ATGCAT	3 cut(s)	172, 319, 1330
MroI	TCCGGA	1 cut(s)	1790
MroXI	GAANNNNTTC	2 cut(s)	84, 1871
MseI	TTAA	9 cut(s)	173, 743, 810, 818, 986, 1047, 1337, 1581, 1599
MspI	CCGG	3 cut(s)	305, 1043, 1791
MspR9I	CCNGG	4 cut(s)	238, 1043, 1301, 1883
MunI	CAATTG	1 cut(s)	1245
Mva1269I	GAATGC	1 cut(s)	1361
MvaI	CCWGG	3 cut(s)	238, 1301, 1883
MvnI	CGCG	1 cut(s)	1941
MwoI	GCNNNNNNNGC	7 cut(s)	139, 314, 620, 744, 1073, 1085, 1694
NciI	CCSGG	1 cut(s)	1043
NcoI	CCATGG	1 cut(s)	786
NdeI	CATATG	2 cut(s)	1324, 1546
NlaIII	CATG	9 cut(s)	38, 43, 72, 487, 607, 790, 1505, 1532, 1681
NlaIV	GGNNCC	5 cut(s)	1134, 1158, 1239, 1429, 1449
NmuCI	GTSAC	4 cut(s)	97, 463, 1517, 1811
NsiI	ATGCAT	3 cut(s)	172, 319, 1330
NspI	RCATGY	2 cut(s)	43, 1532
PagI	TCATGA	1 cut(s)	1501
PciI	ACATGT	2 cut(s)	39, 1528
PciSI	GCTCTTC	1 cut(s)	1789
PcsI	WCGNNNNNNNCGW	2 cut(s)	18, 1713
PctI	GAATGC	1 cut(s)	1361
PdmI	GAANNNNTTC	2 cut(s)	84, 1871
PfeI	GAWTC	7 cut(s)	85, 341, 731, 866, 1019, 1250, 1638
PflMI	CCANNNNNTGG	1 cut(s)	1424
PkrI	GCNGC	6 cut(s)	33, 162, 1078, 1480, 1981, 1994
Ple19I	CGATCG	1 cut(s)	1720
PleI	GAGTC	3 cut(s)	318, 434, 1808
PpsI	GAGTC	3 cut(s)	318, 434, 1808
PscI	ACATGT	2 cut(s)	39, 1528
PshAI	GACNNNNGTC	1 cut(s)	776
Psp1406I	AACGTT	1 cut(s)	947
Psp6I	CCWGG	3 cut(s)	236, 1299, 1881
PspGI	CCWGG	3 cut(s)	236, 1299, 1881
PspN4I	GGNNCC	5 cut(s)	1134, 1158, 1239, 1429, 1449
PspPI	GGNCC	1 cut(s)	1169
PstI	CTGCAG	2 cut(s)	476, 856
PstNI	CAGNNNCTG	3 cut(s)	160, 1076, 1400
PsuI	RGATCY	3 cut(s)	559, 1156, 1267
PvuI	CGATCG	1 cut(s)	1720
RsaI	GTAC	2 cut(s)	977, 1449
RsaNI	GTAC	2 cut(s)	976, 1448
SapI	GCTCTTC	1 cut(s)	1789
SaqAI	TTAA	9 cut(s)	173, 743, 810, 818, 986, 1047, 1337, 1581, 1599
SatI	GCNGC	6 cut(s)	32, 161, 1077, 1479, 1980, 1993
Sau96I	GGNCC	1 cut(s)	1169
SchI	GAGTC	3 cut(s)	318, 434, 1808
ScrFI	CCNGG	4 cut(s)	238, 1043, 1301, 1883
SduI	GDGCHC	6 cut(s)	135, 580, 649, 1069, 1242, 1690
SfcI	CTRYAG	2 cut(s)	472, 852
SinI	GGWCC	1 cut(s)	1169
SmlI	CTYRAG	3 cut(s)	1104, 1568, 1691
SmoI	CTYRAG	3 cut(s)	1104, 1568, 1691
SsiI	CCGC	5 cut(s)	251, 308, 1431, 1603, 1990
SspMI	CTAG	2 cut(s)	956, 1467
StyD4I	CCNGG	4 cut(s)	236, 1041, 1299, 1881
StyI	CCWWGG	5 cut(s)	270, 786, 1146, 1423, 1972
TaaI	ACNGT	5 cut(s)	374, 778, 1037, 1396, 1558
TaiI	ACGT	2 cut(s)	927, 950
TaqI	TCGA	6 cut(s)	129, 184, 210, 322, 1008, 1560
TfiI	GAWTC	7 cut(s)	85, 341, 731, 866, 1019, 1250, 1638
Tru1I	TTAA	9 cut(s)	173, 743, 810, 818, 986, 1047, 1337, 1581, 1599
Tru9I	TTAA	9 cut(s)	173, 743, 810, 818, 986, 1047, 1337, 1581, 1599
TscAI	CASTG	4 cut(s)	649, 1042, 1414, 1734
TseFI	GTSAC	4 cut(s)	97, 463, 1517, 1811
TseI	GCWGC	6 cut(s)	31, 160, 1076, 1478, 1979, 1992
Tsp45I	GTSAC	4 cut(s)	97, 463, 1517, 1811
TspDTI	ATGAA	5 cut(s)	261, 472, 1032, 1074, 1361
TspGWI	ACGGA	3 cut(s)	348, 436, 1364
TspRI	CASTG	4 cut(s)	649, 1042, 1414, 1734
Van91I	CCANNNNNTGG	1 cut(s)	1424
VneI	GTGCAC	1 cut(s)	1686
VpaK11BI	GGWCC	1 cut(s)	1169
XapI	RAATTY	4 cut(s)	935, 1537, 1586, 1658
XceI	RCATGY	2 cut(s)	43, 1532
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1421
XmiI	GTMKAC	1 cut(s)	833
XmnI	GAANNNNTTC	2 cut(s)	84, 1871
XspI	CTAG	2 cut(s)	956, 1467
Zsp2I	ATGCAT	3 cut(s)	172, 319, 1330

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.