Pentatricopeptide repeat-containing protein At1g07740
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G07740 |
| fragaria_vesca | FvH4_3g34780 |
| malus_domestica | MD04G1036700.v1.1 MD11G1115700.v1.1 MD12G1096600.v1.1 |
| prunus_persica | Prupe.6G007300_v2.0.a1 |
| pyrus_communis | pycom03g08320 |
| rosa_chinensis | RchiOBHm_Chr5g0062521 |
| rosa_laevigata | RLG00000035563 |
| rosa_multiflora | Rmu_sc0004988.1_g000027 |
| rosa_roxburghii | Rroxscaffold_1G00018090 |
| rosa_rugosa | Rorug05G0350400 |
| rosa_samantha | Rh5AG410400 Rh5BG424400 Rh5CG448100 Rh5DG438700 |
| rosa_wichuraiana | Rw5G038640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1155 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 247 |
| AccI | GTMKAC | 1 cut(s) | 1288 |
| AccII | CGCG | 1 cut(s) | 132 |
| AciI | CCGC | 3 cut(s) | 130, 609, 626 |
| AcoI | YGGCCR | 1 cut(s) | 665 |
| AcsI | RAATTY | 1 cut(s) | 670 |
| AfaI | GTAC | 3 cut(s) | 239, 565, 875 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 247 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 491, 523, 809, 841, 1161, 1193 |
| AluBI | AGCT | 9 cut(s) | 160, 295, 446, 529, 731, 836, 1202, 1415, 1424 |
| AluI | AGCT | 9 cut(s) | 160, 295, 446, 529, 731, 836, 1202, 1415, 1424 |
| Alw26I | GTCTC | 5 cut(s) | 141, 187, 228, 320, 417 |
| AoxI | GGCC | 4 cut(s) | 167, 501, 573, 665 |
| ApeKI | GCWGC | 3 cut(s) | 60, 1142, 1199 |
| ApoI | RAATTY | 1 cut(s) | 670 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 138 |
| AspS9I | GGNCC | 1 cut(s) | 168 |
| AsuHPI | GGTGA | 3 cut(s) | 728, 833, 1457 |
| BbsI | GAAGAC | 1 cut(s) | 210 |
| BbvI | GCAGC | 3 cut(s) | 72, 1129, 1211 |
| BccI | CCATC | 4 cut(s) | 179, 898, 1210, 1375 |
| BceAI | ACGGC | 4 cut(s) | 305, 365, 434, 1001 |
| BcoDI | GTCTC | 5 cut(s) | 141, 187, 228, 320, 417 |
| BfaI | CTAG | 4 cut(s) | 774, 923, 1334, 1427 |
| BfmI | CTRYAG | 1 cut(s) | 1143 |
| BisI | GCNGC | 3 cut(s) | 61, 1143, 1200 |
| BlsI | GCNGC | 3 cut(s) | 62, 1144, 1201 |
| BmgT120I | GGNCC | 1 cut(s) | 168 |
| BmsI | GCATC | 3 cut(s) | 531, 1348, 1426 |
| BpiI | GAAGAC | 1 cut(s) | 210 |
| BpuEI | CTTGAG | 2 cut(s) | 776, 869 |
| BsaI | GGTCTC | 2 cut(s) | 320, 417 |
| BsaJI | CCNNGG | 1 cut(s) | 983 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1173, 1203 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 247 |
| Bse3DI | GCAATG | 6 cut(s) | 55, 364, 384, 474, 566, 1281 |
| BseDI | CCNNGG | 1 cut(s) | 983 |
| BseGI | GGATG | 4 cut(s) | 171, 634, 1218, 1441 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 247 |
| BseMI | GCAATG | 6 cut(s) | 55, 364, 384, 474, 566, 1281 |
| BseRI | GAGGAG | 1 cut(s) | 1391 |
| BseX3I | CGGCCG | 1 cut(s) | 665 |
| BseXI | GCAGC | 3 cut(s) | 72, 1129, 1211 |
| BseYI | CCCAGC | 1 cut(s) | 352 |
| Bsh1236I | CGCG | 1 cut(s) | 132 |
| Bsh1285I | CGRYCG | 1 cut(s) | 668 |
| BshFI | GGCC | 4 cut(s) | 169, 503, 575, 667 |
| BsiEI | CGRYCG | 1 cut(s) | 668 |
| BslFI | GGGAC | 1 cut(s) | 87 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 247 |
| BsmAI | GTCTC | 5 cut(s) | 141, 187, 228, 320, 417 |
| BsmBI | CGTCTC | 1 cut(s) | 187 |
| BsmFI | GGGAC | 1 cut(s) | 87 |
| BsnI | GGCC | 4 cut(s) | 169, 503, 575, 667 |
| Bso31I | GGTCTC | 2 cut(s) | 320, 417 |
| Bsp143I | GATC | 2 cut(s) | 24, 1015 |
| BspACI | CCGC | 3 cut(s) | 130, 609, 626 |
| BspANI | GGCC | 4 cut(s) | 169, 503, 575, 667 |
| BspFNI | CGCG | 1 cut(s) | 132 |
| BspMAI | CTGCAG | 1 cut(s) | 1147 |
| BspQI | GCTCTTC | 2 cut(s) | 288, 450 |
| BspTNI | GGTCTC | 2 cut(s) | 320, 417 |
| BsrDI | GCAATG | 6 cut(s) | 55, 364, 384, 474, 566, 1281 |
| BssECI | CCNNGG | 1 cut(s) | 983 |
| BssMI | GATC | 2 cut(s) | 24, 1015 |
| Bst6I | CTCTTC | 3 cut(s) | 233, 288, 450 |
| BstC8I | GCNNGC | 6 cut(s) | 167, 297, 444, 573, 733, 920 |
| BstDSI | CCRYGG | 1 cut(s) | 983 |
| BstF5I | GGATG | 4 cut(s) | 171, 634, 1218, 1441 |
| BstFNI | CGCG | 1 cut(s) | 132 |
| BstKTI | GATC | 2 cut(s) | 27, 1018 |
| BstMAI | GTCTC | 5 cut(s) | 141, 187, 228, 320, 417 |
| BstMBI | GATC | 2 cut(s) | 24, 1015 |
| BstMCI | CGRYCG | 1 cut(s) | 668 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 60, 166, 581, 928, 1084, 1148, 1421 |
| BstNSI | RCATGY | 2 cut(s) | 77, 922 |
| BstSFI | CTRYAG | 1 cut(s) | 1143 |
| BstUI | CGCG | 1 cut(s) | 132 |
| BstV1I | GCAGC | 3 cut(s) | 72, 1129, 1211 |
| BstV2I | GAAGAC | 1 cut(s) | 210 |
| BstZI | CGGCCG | 1 cut(s) | 665 |
| BsuRI | GGCC | 4 cut(s) | 169, 503, 575, 667 |
| BtgI | CCRYGG | 1 cut(s) | 983 |
| BtsCI | GGATG | 4 cut(s) | 171, 634, 1218, 1441 |
| Cac8I | GCNNGC | 6 cut(s) | 167, 297, 444, 573, 733, 920 |
| Cfr13I | GGNCC | 1 cut(s) | 168 |
| Csp6I | GTAC | 3 cut(s) | 238, 564, 874 |
| CviAII | CATG | 4 cut(s) | 74, 856, 919, 932 |
| CviQI | GTAC | 3 cut(s) | 238, 564, 874 |
| DpnI | GATC | 2 cut(s) | 26, 1017 |
| DpnII | GATC | 2 cut(s) | 24, 1015 |
| EaeI | YGGCCR | 1 cut(s) | 665 |
| EagI | CGGCCG | 1 cut(s) | 665 |
| Eam1104I | CTCTTC | 3 cut(s) | 233, 288, 450 |
| EarI | CTCTTC | 3 cut(s) | 233, 288, 450 |
| EclXI | CGGCCG | 1 cut(s) | 665 |
| Eco147I | AGGCCT | 1 cut(s) | 575 |
| Eco31I | GGTCTC | 2 cut(s) | 320, 417 |
| Eco52I | CGGCCG | 1 cut(s) | 665 |
| EcoRI | GAATTC | 1 cut(s) | 670 |
| Esp3I | CGTCTC | 1 cut(s) | 187 |
| FaeI | CATG | 4 cut(s) | 77, 859, 922, 935 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 30, 62, 363, 395 |
| FaqI | GGGAC | 1 cut(s) | 87 |
| FatI | CATG | 4 cut(s) | 73, 855, 918, 931 |
| FblI | GTMKAC | 1 cut(s) | 1288 |
| Fnu4HI | GCNGC | 3 cut(s) | 61, 1143, 1200 |
| FokI | GGATG | 4 cut(s) | 158, 641, 1225, 1448 |
| Fsp4HI | GCNGC | 3 cut(s) | 61, 1143, 1200 |
| FspBI | CTAG | 4 cut(s) | 774, 923, 1334, 1427 |
| GluI | GCNGC | 3 cut(s) | 61, 1143, 1200 |
| GsaI | CCCAGC | 1 cut(s) | 356 |
| HaeIII | GGCC | 4 cut(s) | 169, 503, 575, 667 |
| Hin1II | CATG | 4 cut(s) | 77, 859, 922, 935 |
| HincII | GTYRAC | 2 cut(s) | 1222, 1281 |
| HindII | GTYRAC | 2 cut(s) | 1222, 1281 |
| HindIII | AAGCTT | 3 cut(s) | 158, 729, 1413 |
| HinfI | GANTC | 1 cut(s) | 484 |
| HphI | GGTGA | 3 cut(s) | 728, 833, 1457 |
| Hpy166II | GTNNAC | 4 cut(s) | 980, 1222, 1281, 1289 |
| Hpy188I | TCNGA | 4 cut(s) | 187, 483, 993, 1236 |
| Hpy188III | TCNNGA | 7 cut(s) | 12, 306, 325, 414, 433, 1061, 1162 |
| Hpy8I | GTNNAC | 4 cut(s) | 980, 1222, 1281, 1289 |
| Hpy99I | CGWCG | 2 cut(s) | 326, 420 |
| HpyCH4IV | ACGT | 1 cut(s) | 785 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 60, 166, 581, 928, 1084, 1148, 1421 |
| HpySE526I | ACGT | 1 cut(s) | 785 |
| Hsp92II | CATG | 4 cut(s) | 77, 859, 922, 935 |
| Kzo9I | GATC | 2 cut(s) | 24, 1015 |
| LguI | GCTCTTC | 2 cut(s) | 288, 450 |
| Lsp1109I | GCAGC | 3 cut(s) | 72, 1129, 1211 |
| LweI | GCATC | 3 cut(s) | 531, 1348, 1426 |
| MaeI | CTAG | 4 cut(s) | 774, 923, 1334, 1427 |
| MaeII | ACGT | 1 cut(s) | 785 |
| MaeIII | GTNAC | 5 cut(s) | 716, 781, 886, 1324, 1471 |
| MalI | GATC | 2 cut(s) | 26, 1017 |
| MboI | GATC | 2 cut(s) | 24, 1015 |
| MboII | GAAGA | 9 cut(s) | 41, 215, 220, 224, 275, 467, 737, 958, 1081 |
| MluCI | AATT | 6 cut(s) | 505, 553, 670, 994, 1350, 1400 |
| MmeI | TCCRAC | 2 cut(s) | 807, 1159 |
| MroXI | GAANNNNTTC | 1 cut(s) | 138 |
| MseI | TTAA | 6 cut(s) | 534, 552, 591, 1083, 1116, 1495 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1315 |
| MvnI | CGCG | 1 cut(s) | 132 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 60, 166, 581, 928, 1084, 1148, 1421 |
| NdeII | GATC | 2 cut(s) | 24, 1015 |
| NlaIII | CATG | 4 cut(s) | 77, 859, 922, 935 |
| NmeAIII | GCCGAG | 2 cut(s) | 315, 428 |
| NmuCI | GTSAC | 3 cut(s) | 716, 781, 1471 |
| NspI | RCATGY | 2 cut(s) | 77, 922 |
| PaeI | GCATGC | 1 cut(s) | 922 |
| PceI | AGGCCT | 1 cut(s) | 575 |
| PciSI | GCTCTTC | 2 cut(s) | 288, 450 |
| PdmI | GAANNNNTTC | 1 cut(s) | 138 |
| PfeI | GAWTC | 1 cut(s) | 484 |
| PflFI | GACNNNGTC | 1 cut(s) | 1293 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 247 |
| PkrI | GCNGC | 3 cut(s) | 62, 1144, 1201 |
| PsiI | TTATAA | 1 cut(s) | 1155 |
| PspFI | CCCAGC | 1 cut(s) | 352 |
| PspPI | GGNCC | 1 cut(s) | 168 |
| PstI | CTGCAG | 1 cut(s) | 1147 |
| PsyI | GACNNNGTC | 1 cut(s) | 1293 |
| RsaI | GTAC | 3 cut(s) | 239, 565, 875 |
| RsaNI | GTAC | 3 cut(s) | 238, 564, 874 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1315 |
| SapI | GCTCTTC | 2 cut(s) | 288, 450 |
| SaqAI | TTAA | 6 cut(s) | 534, 552, 591, 1083, 1116, 1495 |
| SatI | GCNGC | 3 cut(s) | 61, 1143, 1200 |
| Sau3AI | GATC | 2 cut(s) | 24, 1015 |
| Sau96I | GGNCC | 1 cut(s) | 168 |
| SfaNI | GCATC | 3 cut(s) | 531, 1348, 1426 |
| SfcI | CTRYAG | 1 cut(s) | 1143 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1315 |
| SmlI | CTYRAG | 2 cut(s) | 755, 848 |
| SmoI | CTYRAG | 2 cut(s) | 755, 848 |
| SphI | GCATGC | 1 cut(s) | 922 |
| Sse9I | AATT | 6 cut(s) | 505, 553, 670, 994, 1350, 1400 |
| SseBI | AGGCCT | 1 cut(s) | 575 |
| SsiI | CCGC | 3 cut(s) | 130, 609, 626 |
| SspI | AATATT | 1 cut(s) | 688 |
| SspMI | CTAG | 4 cut(s) | 774, 923, 1334, 1427 |
| StuI | AGGCCT | 1 cut(s) | 575 |
| TaiI | ACGT | 1 cut(s) | 788 |
| TaqI | TCGA | 5 cut(s) | 307, 324, 415, 432, 674 |
| TasI | AATT | 6 cut(s) | 505, 553, 670, 994, 1350, 1400 |
| TfiI | GAWTC | 1 cut(s) | 484 |
| Tru1I | TTAA | 6 cut(s) | 534, 552, 591, 1083, 1116, 1495 |
| Tru9I | TTAA | 6 cut(s) | 534, 552, 591, 1083, 1116, 1495 |
| TseFI | GTSAC | 3 cut(s) | 716, 781, 1471 |
| TseI | GCWGC | 3 cut(s) | 60, 1142, 1199 |
| Tsp45I | GTSAC | 3 cut(s) | 716, 781, 1471 |
| TspDTI | ATGAA | 7 cut(s) | 353, 373, 463, 710, 762, 872, 1082 |
| TspGWI | ACGGA | 2 cut(s) | 89, 551 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1293 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 247 |
| XapI | RAATTY | 1 cut(s) | 670 |
| XceI | RCATGY | 2 cut(s) | 77, 922 |
| XmiI | GTMKAC | 1 cut(s) | 1288 |
| XmnI | GAANNNNTTC | 1 cut(s) | 138 |
| XspI | CTAG | 4 cut(s) | 774, 923, 1334, 1427 |