Prupe.6G054500_v2.0.a1

phosphatase 2c

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
3822221 .. 3824721
2501 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G054500.1

Sequence Viewer

Length: 1122 bp
ATGTCGTGCTCCGTCGCTGTTTCGAACTCGCCGGTGTTTTCGCCGCCGTCGTCTCTGTTCTGCAACAAATCGTCTATGATCACTCCGTCCCCAGAAACCCTAACCCTAGCGACGTCGTCGTCGTCGTCGGACGCGATGGTTTCATGTTCATCTCCGTCGTCGCCGTTTCGGCTTCGGATCCCGAAGCCTCTGAGCGGGCTTTCAGGTTCGGGTCCGGGTTCTCCGGTGACGCAGTTGAAGAGGAAGAGGCCGGCGAGGCTTTATATTCCGGTGGTGTCATCGAGCTTTGTGGATGCTCCGGCGATGGAGTCTCCGGGGGCGAGGAGAGAGGTTGTTGAGGCAGACAGAGAAGGGCACTATTATGTGTCCTGTAAGAGAGGAAGAAGAGAGGCTTTGGAGGATCGGTACTCTGCTACTCTTAATCTTCAAGGTGATCCCAAACAGGCAATTTTTGGTATATTTGATGGGCATGGAGGTGCAAAAGCTGCTGAGTTTGCAGCAGAGAACTTGGCAAAGAATATTTTAAATGAAGCTGTGAGGAGGGATGATGATGAAATCGAGGAAGCGGTCAAGCATGGTTACCTAAATACAGACTCTGATTTTCTTAAAGAGGATTTGCGTGGTGGATCATGCTGTGTGACTGCTGTGATCAGGAATGGTAACCTTGTTGTGTCTAATGCCGGCGATTGCCGTGCTGTCTTGAGCACAGGAGGTGCTGCTGAGGCTCTCACATGTGATCATCGGCCATCAAGGGAAGACGAGAAAGTCAGAATTGAGAACTTGGGTGGCTTTGTTGATTTAAGCCATGGTGTTTGGAGAATTAATGGATCTCTAGCTGTATCTAGAGGAATTGGAGATAGGCACCTTAAACAATTTGTAACACCAGAACCAGAGACCACAGTGGTTAGAATCAAACCTGAACACGAGTTCTTAATCATGGCTTCAGACGGATTATGGGATAAGGTTAGCAACCAGGAAGCAGTGGATGTTGTTCGTCCTTCATGGTTGGCCATTGATGGGCAACCTCTGTTGGCTTGTAAAAAGCTGGTAGAACTATCTGCATCACGAGGCTCTTGCGATGATATTAGCGTGATGGTAGTCCCCTTGGGGCTCTACGTATGA

Protein Analysis

374

Amino Acids

40.08

Weight (kDa)

5.88

Isoelectric Point (pI)

58.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011762)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 118, 764
AatII GACGTC 1 cut(s) 116
AccB1I GGYRCC 1 cut(s) 861
AccBSI CCGCTC 1 cut(s) 195
AccII CGCG 1 cut(s) 134
AciI CCGC 3 cut(s) 44, 195, 566
AclWI GGATC 6 cut(s) 172, 185, 408, 428, 634, 835
AcoI YGGCCR 2 cut(s) 743, 1008
AcuI CTGAAG 1 cut(s) 927
AcyI GRCGYC 1 cut(s) 113
AfaI GTAC 1 cut(s) 407
AfiI CCNNNNNNNGG 2 cut(s) 194, 1017
AflIII ACRYGT 1 cut(s) 731
AgsI TTSAA 2 cut(s) 238, 428
AjnI CCWGG 1 cut(s) 972
AluBI AGCT 5 cut(s) 285, 485, 533, 836, 1045
AluI AGCT 5 cut(s) 285, 485, 533, 836, 1045
Alw21I GWGCWC 2 cut(s) 11, 707
Alw26I GTCTC 3 cut(s) 57, 315, 887
AlwI GGATC 6 cut(s) 172, 185, 408, 428, 634, 835
AlwNI CAGNNNCTG 1 cut(s) 596
AoxI GGCC 3 cut(s) 248, 743, 1008
ApeKI GCWGC 3 cut(s) 485, 497, 716
AseI ATTAAT 1 cut(s) 822
AspS9I GGNCC 1 cut(s) 212
AsuC2I CCSGG 2 cut(s) 216, 315
AsuHPI GGTGA 2 cut(s) 238, 443
AsuII TTCGAA 1 cut(s) 23
AvaII GGWCC 1 cut(s) 212
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 1010
BamHI GGATCC 1 cut(s) 177
BanI GGYRCC 1 cut(s) 861
BanII GRGCYC 1 cut(s) 1113
BauI CACGAG 2 cut(s) 923, 1065
BbsI GAAGAC 1 cut(s) 762
Bbv12I GWGCWC 2 cut(s) 11, 707
BbvCI CCTCAGC 1 cut(s) 720
BbvI GCAGC 3 cut(s) 472, 509, 703
BccI CCATC 6 cut(s) 130, 298, 458, 754, 1010, 1087
BceAI ACGGC 3 cut(s) 31, 148, 675
BcgI CGANNNNNNTGC 4 cut(s) 674, 708, 1056, 1090
BciT130I CCWGG 1 cut(s) 974
BclI TGATCA 3 cut(s) 78, 648, 736
BcnI CCSGG 2 cut(s) 216, 315
BcoDI GTCTC 3 cut(s) 57, 315, 887
BfaI CTAG 3 cut(s) 107, 833, 843
BglI GCCNNNNNGGC 2 cut(s) 169, 256
BisI GCNGC 4 cut(s) 44, 486, 498, 717
BlsI GCNGC 4 cut(s) 45, 487, 499, 718
Bme1390I CCNGG 3 cut(s) 216, 315, 974
Bme18I GGWCC 1 cut(s) 212
BmgT120I GGNCC 1 cut(s) 212
BmiI GGNNCC 3 cut(s) 179, 213, 863
BmrFI CCNGG 3 cut(s) 216, 315, 974
BmsI GCATC 2 cut(s) 283, 1070
BpiI GAAGAC 1 cut(s) 762
Bpu10I CCTNAGC 1 cut(s) 720
Bpu14I TTCGAA 1 cut(s) 23
BpuEI CTTGAG 1 cut(s) 721
BpuMI CCSGG 2 cut(s) 216, 315
BsaAI YACGTR 1 cut(s) 1117
BsaHI GRCGYC 1 cut(s) 113
BsaI GGTCTC 1 cut(s) 887
BsaJI CCNNGG 3 cut(s) 314, 805, 1104
BsaWI WCCGGW 2 cut(s) 223, 268
BsaXI ACNNNNNCTCC 2 cut(s) 389, 419
Bsc4I CCNNNNNNNGG 2 cut(s) 194, 1017
Bse118I RCCGGY 3 cut(s) 31, 250, 680
BseBI CCWGG 1 cut(s) 974
BseDI CCNNGG 3 cut(s) 314, 805, 1104
BseGI GGATG 3 cut(s) 298, 550, 991
BseLI CCNNNNNNNGG 2 cut(s) 194, 1017
BseMII CTCAG 3 cut(s) 182, 480, 711
BseRI GAGGAG 2 cut(s) 337, 553
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 3 cut(s) 472, 509, 703
Bsh1236I CGCG 1 cut(s) 134
BshFI GGCC 3 cut(s) 250, 745, 1010
BshNI GGYRCC 1 cut(s) 861
BsiHKAI GWGCWC 2 cut(s) 11, 707
BsiSI CCGG 8 cut(s) 32, 215, 224, 251, 269, 299, 314, 681
BslFI GGGAC 2 cut(s) 73, 1085
BslI CCNNNNNNNGG 2 cut(s) 194, 1017
BsmAI GTCTC 3 cut(s) 57, 315, 887
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 2 cut(s) 73, 1085
BsnI GGCC 3 cut(s) 250, 745, 1010
Bso31I GGTCTC 1 cut(s) 887
Bsp119I TTCGAA 1 cut(s) 23
Bsp1286I GDGCHC 4 cut(s) 11, 357, 707, 1113
Bsp143I GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
Bsp19I CCATGG 1 cut(s) 805
BspACI CCGC 3 cut(s) 44, 195, 566
BspANI GGCC 3 cut(s) 250, 745, 1010
BspCNI CTCAG 3 cut(s) 183, 481, 712
BspFNI CGCG 1 cut(s) 134
BspLI GGNNCC 3 cut(s) 179, 213, 863
BspPI GGATC 6 cut(s) 172, 185, 408, 428, 634, 835
BspT104I TTCGAA 1 cut(s) 23
BspT107I GGYRCC 1 cut(s) 861
BspTNI GGTCTC 1 cut(s) 887
BsrBI CCGCTC 1 cut(s) 195
BsrFI RCCGGY 3 cut(s) 31, 250, 680
BssAI RCCGGY 3 cut(s) 31, 250, 680
BssECI CCNNGG 3 cut(s) 314, 805, 1104
BssMI GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
BssNI GRCGYC 1 cut(s) 113
BssSI CACGAG 2 cut(s) 923, 1065
BssT1I CCWWGG 2 cut(s) 805, 1104
Bst2BI CACGAG 2 cut(s) 923, 1065
Bst2UI CCWGG 1 cut(s) 974
Bst4CI ACNGT 1 cut(s) 901
Bst6I CTCTTC 3 cut(s) 233, 239, 379
BstACI GRCGYC 1 cut(s) 113
BstAPI GCANNNNNTGC 1 cut(s) 485
BstBAI YACGTR 1 cut(s) 1117
BstBI TTCGAA 1 cut(s) 23
BstC8I GCNNGC 3 cut(s) 197, 252, 682
BstDEI CTNAG 3 cut(s) 191, 489, 720
BstDSI CCRYGG 1 cut(s) 805
BstEII GGTNACC 2 cut(s) 578, 659
BstF5I GGATG 3 cut(s) 298, 550, 991
BstFNI CGCG 1 cut(s) 134
BstKTI GATC 8 cut(s) 81, 180, 403, 436, 629, 651, 739, 830
BstMAI GTCTC 3 cut(s) 57, 315, 887
BstMBI GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
BstMWI GCNNNNNNNGC 5 cut(s) 169, 256, 485, 494, 722
BstNI CCWGG 1 cut(s) 974
BstNSI RCATGY 1 cut(s) 735
BstPI GGTNACC 2 cut(s) 578, 659
BstSCI CCNGG 3 cut(s) 214, 313, 972
BstSLI GKGCMC 1 cut(s) 357
BstSNI TACGTA 1 cut(s) 1117
BstUI CGCG 1 cut(s) 134
BstV1I GCAGC 3 cut(s) 472, 509, 703
BstV2I GAAGAC 1 cut(s) 762
BstX2I RGATCY 2 cut(s) 177, 827
BstYI RGATCY 2 cut(s) 177, 827
BsuRI GGCC 3 cut(s) 250, 745, 1010
BtgI CCRYGG 1 cut(s) 805
BtgZI GCGATG 3 cut(s) 149, 317, 1092
BtsCI GGATG 3 cut(s) 298, 550, 991
BtsI GCAGTG 1 cut(s) 987
BtsIMutI CAGTG 2 cut(s) 906, 987
Cac8I GCNNGC 3 cut(s) 197, 252, 682
CaiI CAGNNNCTG 1 cut(s) 596
Cfr10I RCCGGY 3 cut(s) 31, 250, 680
Cfr13I GGNCC 1 cut(s) 212
CseI GACGC 2 cut(s) 140, 238
Csp6I GTAC 1 cut(s) 406
CviAII CATG 8 cut(s) 144, 470, 575, 630, 732, 806, 937, 1002
CviQI GTAC 1 cut(s) 406
DdeI CTNAG 3 cut(s) 191, 489, 720
DpnI GATC 8 cut(s) 80, 179, 402, 435, 628, 650, 738, 829
DpnII GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
DraI TTTAAA 1 cut(s) 525
DrdI GACNNNNNNGTC 2 cut(s) 118, 764
DseDI GACNNNNNNGTC 2 cut(s) 118, 764
EaeI YGGCCR 2 cut(s) 743, 1008
Eam1104I CTCTTC 3 cut(s) 233, 239, 379
EarI CTCTTC 3 cut(s) 233, 239, 379
Eco105I TACGTA 1 cut(s) 1117
Eco130I CCWWGG 2 cut(s) 805, 1104
Eco24I GRGCYC 1 cut(s) 1113
Eco31I GGTCTC 1 cut(s) 887
Eco47I GGWCC 1 cut(s) 212
Eco57I CTGAAG 1 cut(s) 927
Eco91I GGTNACC 2 cut(s) 578, 659
EcoO65I GGTNACC 2 cut(s) 578, 659
EcoRII CCWGG 1 cut(s) 972
EcoT14I CCWWGG 2 cut(s) 805, 1104
EcoT38I GRGCYC 1 cut(s) 1113
ErhI CCWWGG 2 cut(s) 805, 1104
Esp3I CGTCTC 1 cut(s) 57
FaeI CATG 8 cut(s) 147, 473, 578, 633, 735, 809, 940, 1005
FalI AAGNNNNNCTT 2 cut(s) 376, 408
FaqI GGGAC 2 cut(s) 73, 1085
FatI CATG 8 cut(s) 143, 469, 574, 629, 731, 805, 936, 1001
FauI CCCGC 1 cut(s) 188
FbaI TGATCA 3 cut(s) 78, 648, 736
Fnu4HI GCNGC 4 cut(s) 44, 486, 498, 717
FokI GGATG 3 cut(s) 305, 557, 998
FriOI GRGCYC 1 cut(s) 1113
Fsp4HI GCNGC 4 cut(s) 44, 486, 498, 717
FspBI CTAG 3 cut(s) 107, 833, 843
GluI GCNGC 4 cut(s) 44, 486, 498, 717
HaeIII GGCC 3 cut(s) 250, 745, 1010
HapII CCGG 8 cut(s) 32, 215, 224, 251, 269, 299, 314, 681
HgaI GACGC 2 cut(s) 140, 238
Hin1I GRCGYC 1 cut(s) 113
Hin1II CATG 8 cut(s) 147, 473, 578, 633, 735, 809, 940, 1005
HinfI GANTC 3 cut(s) 308, 593, 909
HpaII CCGG 8 cut(s) 32, 215, 224, 251, 269, 299, 314, 681
HphI GGTGA 2 cut(s) 238, 443
Hpy188I TCNGA 6 cut(s) 130, 177, 192, 598, 770, 946
Hpy188III TCNNGA 5 cut(s) 181, 652, 700, 843, 1065
HpyAV CCTTC 2 cut(s) 344, 1008
HpyCH4III ACNGT 1 cut(s) 901
HpyCH4IV ACGT 2 cut(s) 113, 1116
HpyCH4V TGCA 4 cut(s) 63, 479, 497, 1061
HpyF10VI GCNNNNNNNGC 5 cut(s) 169, 256, 485, 494, 722
HpyF3I CTNAG 3 cut(s) 191, 489, 720
HpySE526I ACGT 2 cut(s) 113, 1116
Hsp92I GRCGYC 1 cut(s) 113
Hsp92II CATG 8 cut(s) 147, 473, 578, 633, 735, 809, 940, 1005
KroI GCCGGC 2 cut(s) 250, 680
KroNI GCCGGC 2 cut(s) 252, 682
Ksp22I TGATCA 3 cut(s) 78, 648, 736
Kzo9I GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
LmnI GCTCC 2 cut(s) 14, 301
Lsp1109I GCAGC 3 cut(s) 472, 509, 703
LweI GCATC 2 cut(s) 283, 1070
MaeI CTAG 3 cut(s) 107, 833, 843
MaeII ACGT 2 cut(s) 113, 1116
MaeIII GTNAC 5 cut(s) 226, 578, 637, 659, 877
MalI GATC 8 cut(s) 80, 179, 402, 435, 628, 650, 738, 829
MbiI CCGCTC 1 cut(s) 195
MboI GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
MboII GAAGA 6 cut(s) 250, 256, 393, 396, 416, 767
MflI RGATCY 2 cut(s) 177, 827
MhlI GDGCHC 4 cut(s) 11, 357, 707, 1113
MlsI TGGCCA 1 cut(s) 1010
MluCI AATT 5 cut(s) 447, 771, 819, 849, 872
MluNI TGGCCA 1 cut(s) 1010
MlyI GAGTC 2 cut(s) 317, 587
MmeI TCCRAC 1 cut(s) 108
Mox20I TGGCCA 1 cut(s) 1010
MroNI GCCGGC 2 cut(s) 250, 680
MscI TGGCCA 1 cut(s) 1010
MseI TTAA 7 cut(s) 420, 524, 606, 800, 822, 867, 932
MslI CAYNNNNRTG 2 cut(s) 360, 474
Msp20I TGGCCA 1 cut(s) 1010
MspI CCGG 8 cut(s) 32, 215, 224, 251, 269, 299, 314, 681
MspR9I CCNGG 3 cut(s) 216, 315, 974
MvaI CCWGG 1 cut(s) 974
MvnI CGCG 1 cut(s) 134
MwoI GCNNNNNNNGC 5 cut(s) 169, 256, 485, 494, 722
NaeI GCCGGC 2 cut(s) 252, 682
NciI CCSGG 2 cut(s) 216, 315
NcoI CCATGG 1 cut(s) 805
NdeII GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
NgoMIV GCCGGC 2 cut(s) 250, 680
NlaIII CATG 8 cut(s) 147, 473, 578, 633, 735, 809, 940, 1005
NlaIV GGNNCC 3 cut(s) 179, 213, 863
NmuCI GTSAC 2 cut(s) 226, 637
NspI RCATGY 1 cut(s) 735
NspV TTCGAA 1 cut(s) 23
PciI ACATGT 1 cut(s) 731
PcsI WCGNNNNNNNCGW 4 cut(s) 47, 119, 122, 131
PdiI GCCGGC 2 cut(s) 252, 682
PfeI GAWTC 1 cut(s) 909
PflFI GACNNNGTC 1 cut(s) 115
PkrI GCNGC 4 cut(s) 45, 487, 499, 718
PleI GAGTC 2 cut(s) 316, 587
PpsI GAGTC 2 cut(s) 316, 587
Ppu21I YACGTR 1 cut(s) 1117
PscI ACATGT 1 cut(s) 731
PshBI ATTAAT 1 cut(s) 822
Psp6I CCWGG 1 cut(s) 972
PspEI GGTNACC 2 cut(s) 578, 659
PspGI CCWGG 1 cut(s) 972
PspN4I GGNNCC 3 cut(s) 179, 213, 863
PspPI GGNCC 1 cut(s) 212
PstNI CAGNNNCTG 1 cut(s) 596
PsuI RGATCY 2 cut(s) 177, 827
PsyI GACNNNGTC 1 cut(s) 115
RsaI GTAC 1 cut(s) 407
RsaNI GTAC 1 cut(s) 406
RseI CAYNNNNRTG 2 cut(s) 360, 474
SaqAI TTAA 7 cut(s) 420, 524, 606, 800, 822, 867, 932
SatI GCNGC 4 cut(s) 44, 486, 498, 717
Sau3AI GATC 8 cut(s) 78, 177, 400, 433, 626, 648, 736, 827
Sau96I GGNCC 1 cut(s) 212
SchI GAGTC 2 cut(s) 317, 587
ScrFI CCNGG 3 cut(s) 216, 315, 974
SduI GDGCHC 4 cut(s) 11, 357, 707, 1113
SfaNI GCATC 2 cut(s) 283, 1070
SfuI TTCGAA 1 cut(s) 23
SgrAI CRCCGGYG 1 cut(s) 31
SinI GGWCC 1 cut(s) 212
SmiMI CAYNNNNRTG 2 cut(s) 360, 474
SmlI CTYRAG 1 cut(s) 700
SmoI CTYRAG 1 cut(s) 700
SnaBI TACGTA 1 cut(s) 1117
Sse9I AATT 5 cut(s) 447, 771, 819, 849, 872
SsiI CCGC 3 cut(s) 44, 195, 566
SspI AATATT 1 cut(s) 520
SspMI CTAG 3 cut(s) 107, 833, 843
StyD4I CCNGG 3 cut(s) 214, 313, 972
StyI CCWWGG 2 cut(s) 805, 1104
TaaI ACNGT 1 cut(s) 901
TaiI ACGT 2 cut(s) 116, 1119
TaqI TCGA 3 cut(s) 23, 281, 558
TasI AATT 5 cut(s) 447, 771, 819, 849, 872
TauI GCSGC 1 cut(s) 46
TfiI GAWTC 1 cut(s) 909
Tru1I TTAA 7 cut(s) 420, 524, 606, 800, 822, 867, 932
Tru9I TTAA 7 cut(s) 420, 524, 606, 800, 822, 867, 932
TscAI CASTG 2 cut(s) 906, 987
TseFI GTSAC 2 cut(s) 226, 637
TseI GCWGC 3 cut(s) 485, 497, 716
Tsp45I GTSAC 2 cut(s) 226, 637
TspDTI ATGAA 5 cut(s) 132, 138, 543, 567, 990
TspGWI ACGGA 3 cut(s) 75, 144, 963
TspRI CASTG 2 cut(s) 906, 987
Tth111I GACNNNGTC 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 212
VspI ATTAAT 1 cut(s) 822
XbaI TCTAGA 1 cut(s) 842
XceI RCATGY 1 cut(s) 735
XspI CTAG 3 cut(s) 107, 833, 843
ZraI GACGTC 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.