Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0008856

Physical Location & Seq

Genomic Coordinates Reverse (-)

5309902 .. 5314391

Gene Structure 4490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G078200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGGGAAAGCAATTGCAGCGCCAGGACTCTGGTGTTGAGAGCAACCGTCCAGGCTGCATGTGGAGCCTAATGCATATGCTTGATTACCATCATTGGAACAATGTCAAAAATATGCTTCCACACAGAAAGCGCGCCGGAGGGAGAAGAGTCAGATGCAACTATGGAAGTAGGAAAGCAACTTTGAACAGTCGTGACGTTGGTCAAAGGGAAGAATTTGCAGCTGCTGATGCTGAACCTTTGCTGGTTCAACATCCCAGTACAGAAACTAGCTCAGCAAAGAAAAGGTCTGGTAAATCTCGCACAAAAGCATCAAGTGCTAAAGAGAAACCTCGTGAAGAAAGCACCAAAAGCTGGATTTTAAGCTTCCATGTGCAATCATGGTTGTGGCGTACGAGCGAAGTGCATGATGTACAGCCTTCAGAAAATTGTTTGGATAAAACAGGAAAGAGAGGCAGCACTAGTCCCAGCAAGAAACAGGCACTTTCTACAGAAGAAAGTGAAAAAGTCATGGAATTGGCACCGAACAAGAAGCCAACAAAGACTAACCAGGCACACAAAGACATTTCCAGTGACCAGTTTAATGACCATGCTGATATTCTGGAGATATTTAAGGCAAACAAGGAATTTTTCTTTAAAATCCTACAAGATCCAGATGTTAATACAAACCAGTTTCCTGGCCTGCAAAATTCCAAGAACAAAGTCAGACTAACAAAATCAAGGTCATTTCCTGTAGCTGATTCATCTCAAGCTAGAAATATTAGGCCTAAGAGCACACTCAAACACAAGCAGAATGAAGTTTGGTCCTTCCCCAAAGGAGAAATACTGCTTTCTGGTACTCAGACACCAAAGTTAGTGACATCCGAATCTCAAGAGGATTATTCTATGAAGTCCATGCCTTACGTGGCTGGTGATATCAGTGTAGGCAGCAGTGTCATGAAACAAGAAACAAGCTTTTCTTCTCCGGGTTTGCCTGAGGGATTTAGTCACCGAGGGTGGAATCAGTTGGTCATAAATCGTTTCAAAGATATAACGCAGAAGCTAATGCATGCAATTCAGGAGGGCAAGAAGGAAAATGCTGACCCTTCCATCAAGGCACTCTTCCGGAAAGACCCTTCTGGATGTGATGAGAAAGAATTGTCTGAAACTCCGGATATAGCCATGGGACAACAGAGAAACAAGGTGGATGGTTTTGATGATAATCTTGGGAAGCCAAGAATTGGCCGTGTAAGAAGAACCTCCTCTTTAGATGAGTCACTAAATAGATATACTCAGTTGTTTGAGTCTAGTTACAGCAGTGATCAAAGCAAGTGGGATCGCTCTAGGAGCTTAAAGTTGAAAAGTGAAGAAAAAGTTCCTTCAACTGGGAATGCTCAGAAATTCACTAGAAGGAATCTCTCATTGCCTGATCTTGACTATTTTTGTTCCACCTTAAATGGGGCACCGAAAGATGCTTTTCGTTTAGGGATGCCAGTTAAAAATGCTGTGGACCACAATACGAATAAGGAAAATGATGGTCATGTTGATCCCAAGTCAGTGAGCTTTCCTGTAGATACAGATAAGTCTGAACAACTAGATGCTATTACAGAGACAGAGTTTCAGAATAACATGGTAGAAAGAAGTGAAAACAGTGGTAATATTGTTGACACAAAGGACCTTGATGAGCATTTAGTTGAGACAGCAATAGGAGAAATCATAACTCACCAGAAACAAGAGATTGGTTTAAGAATGAATCCAGAAAGTGAGCTAGCAGAACCAATTGAAAGTTCTATTCTTGAACCTAATCTTTCAGACTATATAACTAGCCATGCAGAGTTTTCAACCTCAGAAGGTTCAGAGATAAATCCTAGGAGCTCCCATGTGAATGAGTCAGATTCTTTACCAGCATCCTGCAACACTGTAAACACTGAAATTGAACACAAGAGTGTGGACAATCACTCCGCGCGATTTGTATTCAACAAAGTGGATGATCCCGATTCTGAATTCAATTATGTGAAATATGTTCTTGAGCTGTCAGGCTTCATTGGTCATGAGGACCTTGGGACATGGCACTCACAGGACCAGCCTTTAGATCCTGCATTATTCAAGGAACTGGAGGCTTGCTTTCAGCATGAACTTGATCACCAGCTTCTGTTTGATTTAGTTAATGAGACACTGCTTGAGGTTTATGAAAGATCATACACCTACTTCCCAAGAGCCTTGTCCTTGAGTGGATGCATCCGTCCAATGCCCAAAGGGCACCATCTTCTTGATGATGTATGGACTAGAGTTAGCTCATACCTGAGCTTGAGGCCGGAGATGGACCAGTCGTTGGATGATGTCGTGGCTAGAGATTTGGCAAAGGGTGATCGTTGGATGAACCAGCAATGGGACACTGAGTGTGTGGCACTTGAACTTGAGGATTTGATATTTGATGAACTATTAGATGAAGCAATTTGTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378

Protein Analysis

814

Amino Acids

92.21

Weight (kDa)

5.65

Isoelectric Point (pI)

52.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008856)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g36010 FvH4_3g36010 FvH4_3g36010
malus_domestica	MD11G1109700.v1.1
prunus_persica	Prupe.6G078200_v2.0.a1 Prupe.6G078200_v2.0.a1
pyrus_communis	pycom03g07730 pycom11g09050
rosa_chinensis	RchiOBHm_Chr5g0064421
rosa_laevigata	RLG00000035723
rosa_multiflora	Rmu_sc0001125.1_g000006
rosa_roxburghii	Rroxscaffold_1G00016570
rosa_rugosa	Rorug05G0364600 Rorug05G0364700.1 Rorug05G0364800 Rorug05G0364800 Rorug05G0364800 Rorug05G0364900
rosa_samantha	Rh5AG423200 Rh5BG438700 Rh5CG461400 Rh5DG452000
rosa_wichuraiana	Rw5G039780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	517, 1438, 2235
AccB7I	CCANNNNNTGG	3 cut(s)	351, 1217, 2308
AccII	CGCG	3 cut(s)	132, 1940, 1942
AccIII	TCCGGA	2 cut(s)	1101, 1147
AciI	CCGC	1 cut(s)	1938
AclWI	GGATC	5 cut(s)	641, 1320, 1517, 1961, 2063
AcoI	YGGCCR	1 cut(s)	1219
AcsI	RAATTY	5 cut(s)	212, 623, 685, 1376, 1979
AcuI	CTGAAG	1 cut(s)	402
AdeI	CACNNNGTG	1 cut(s)	2376
AfaI	GTAC	4 cut(s)	259, 391, 411, 835
AfiI	CCNNNNNNNGG	6 cut(s)	351, 1217, 1361, 1434, 2308, 2365
AhlI	ACTAGT	1 cut(s)	458
AjnI	CCWGG	4 cut(s)	21, 49, 546, 673
AjuI	GAANNNNNNNTTGG	2 cut(s)	1747, 1779
AleI	CACNNNNGTG	1 cut(s)	1920
Alw21I	GWGCWC	2 cut(s)	773, 1853
Alw26I	GTCTC	3 cut(s)	1580, 1667, 2141
AlwI	GGATC	5 cut(s)	641, 1320, 1517, 1961, 2063
AlwNI	CAGNNNCTG	2 cut(s)	224, 2128
Aor13HI	TCCGGA	2 cut(s)	1101, 1147
AoxI	GGCC	4 cut(s)	676, 761, 1219, 2288
ApeKI	GCWGC	6 cut(s)	16, 54, 218, 221, 453, 924
ApoI	RAATTY	5 cut(s)	212, 623, 685, 1376, 1979
ArsI	GACNNNNNNTTYG	4 cut(s)	269, 301, 704, 736
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspA2I	CCTAGG	1 cut(s)	1844
AspLEI	GCGC	4 cut(s)	21, 132, 134, 1942
AspS9I	GGNCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
AsuC2I	CCSGG	1 cut(s)	963
AsuHPI	GGTGA	5 cut(s)	920, 977, 1691, 2111, 2354
AsuNHI	GCTAGC	1 cut(s)	1744
AvaII	GGWCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
AvrII	CCTAGG	1 cut(s)	1844
AxyI	CCTNAGG	1 cut(s)	972
BaeGI	GKGCMC	2 cut(s)	1441, 2238
BanI	GGYRCC	3 cut(s)	517, 1438, 2235
BanII	GRGCYC	1 cut(s)	1853
BauI	CACGAG	1 cut(s)	330
Bbv12I	GWGCWC	2 cut(s)	773, 1853
BbvI	GCAGC	6 cut(s)	28, 41, 208, 230, 465, 936
BccI	CCATC	6 cut(s)	96, 1094, 1178, 1505, 2247, 2290
BceAI	ACGGC	1 cut(s)	1206
BcgI	CGANNNNNNTGC	2 cut(s)	382, 416
BciT130I	CCWGG	4 cut(s)	23, 51, 548, 675
BclI	TGATCA	2 cut(s)	1297, 2116
BcnI	CCSGG	1 cut(s)	963
BcoDI	GTCTC	3 cut(s)	1580, 1667, 2141
BcuI	ACTAGT	1 cut(s)	458
BfmI	CTRYAG	3 cut(s)	486, 729, 1545
BfoI	RGCGCY	1 cut(s)	22
BglI	GCCNNNNNGGC	1 cut(s)	2233
BisI	GCNGC	6 cut(s)	17, 55, 219, 222, 454, 925
BlnI	CCTAGG	1 cut(s)	1844
BlpI	GCTNAGC	1 cut(s)	271
BlsI	GCNGC	6 cut(s)	18, 56, 220, 223, 455, 926
Bme1390I	CCNGG	5 cut(s)	23, 51, 548, 675, 963
Bme18I	GGWCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
BmgT120I	GGNCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
BmiI	GGNNCC	4 cut(s)	65, 519, 1440, 2237
BmrFI	CCNGG	5 cut(s)	23, 51, 548, 675, 963
BmrI	ACTGGG	2 cut(s)	249, 1371
BmsI	GCATC	9 cut(s)	143, 217, 317, 1438, 1455, 1564, 1892, 2201, 2223
BmtI	GCTAGC	1 cut(s)	1748
BmuI	ACTGGG	2 cut(s)	249, 1371
BoxI	GACNNNNGTC	1 cut(s)	198
BpmI	CTGGAG	2 cut(s)	620, 2111
Bpu10I	CCTNAGC	1 cut(s)	2279
Bpu1102I	GCTNAGC	1 cut(s)	271
BpuEI	CTTGAG	7 cut(s)	729, 852, 2024, 2177, 2224, 2305, 2414
BpuMI	CCSGG	1 cut(s)	963
BsaAI	YACGTR	1 cut(s)	901
BsaBI	GATNNNNATC	2 cut(s)	87, 1197
BsaJI	CCNNGG	4 cut(s)	988, 1158, 1844, 2035
BsaWI	WCCGGW	2 cut(s)	1101, 1147
BsaXI	ACNNNNNCTCC	2 cut(s)	1919, 1949
Bsc4I	CCNNNNNNNGG	6 cut(s)	351, 1217, 1361, 1434, 2308, 2365
Bse1I	ACTGG	8 cut(s)	255, 567, 574, 667, 1366, 1469, 2094, 2302
Bse21I	CCTNAGG	1 cut(s)	972
Bse3DI	GCAATG	2 cut(s)	1397, 2369
Bse8I	GATNNNNATC	2 cut(s)	87, 1197
BseAI	TCCGGA	2 cut(s)	1101, 1147
BseBI	CCWGG	4 cut(s)	23, 51, 548, 675
BseDI	CCNNGG	4 cut(s)	988, 1158, 1844, 2035
BseJI	GATNNNNATC	2 cut(s)	87, 1197
BseLI	CCNNNNNNNGG	6 cut(s)	351, 1217, 1361, 1434, 2308, 2365
BseMI	GCAATG	2 cut(s)	1397, 2369
BseMII	CTCAG	8 cut(s)	285, 851, 963, 1283, 1385, 1836, 2270, 2364
BseNI	ACTGG	8 cut(s)	255, 567, 574, 667, 1366, 1469, 2094, 2302
BsePI	GCGCGC	1 cut(s)	130
BseRI	GAGGAG	1 cut(s)	1228
BseSI	GKGCMC	2 cut(s)	1441, 2238
BseXI	GCAGC	6 cut(s)	28, 41, 208, 230, 465, 936
BseYI	CCCAGC	1 cut(s)	464
Bsh1236I	CGCG	3 cut(s)	132, 1940, 1942
BshFI	GGCC	4 cut(s)	678, 763, 1221, 2290
BshNI	GGYRCC	3 cut(s)	517, 1438, 2235
BsiHKAI	GWGCWC	2 cut(s)	773, 1853
BsiSI	CCGG	5 cut(s)	135, 962, 1102, 1148, 2291
BsiWI	CGTACG	1 cut(s)	389
BslFI	GGGAC	4 cut(s)	447, 1176, 2053, 2381
BslI	CCNNNNNNNGG	6 cut(s)	351, 1217, 1361, 1434, 2308, 2365
BsmAI	GTCTC	3 cut(s)	1580, 1667, 2141
BsmFI	GGGAC	4 cut(s)	447, 1176, 2053, 2381
BsmI	GAATGC	1 cut(s)	1372
BsnI	GGCC	4 cut(s)	678, 763, 1221, 2290
Bsp1286I	GDGCHC	4 cut(s)	773, 1441, 1853, 2238
Bsp13I	TCCGGA	2 cut(s)	1101, 1147
Bsp1407I	TGTACA	1 cut(s)	409
Bsp1720I	GCTNAGC	1 cut(s)	271
Bsp19I	CCATGG	1 cut(s)	1158
BspACI	CCGC	1 cut(s)	1938
BspANI	GGCC	4 cut(s)	678, 763, 1221, 2290
BspCNI	CTCAG	8 cut(s)	284, 850, 964, 1282, 1384, 1835, 2271, 2365
BspEI	TCCGGA	2 cut(s)	1101, 1147
BspFNI	CGCG	3 cut(s)	132, 1940, 1942
BspHI	TCATGA	2 cut(s)	933, 2026
BspLI	GGNNCC	4 cut(s)	65, 519, 1440, 2237
BspOI	GCTAGC	1 cut(s)	1748
BspPI	GGATC	5 cut(s)	641, 1320, 1517, 1961, 2063
BspT107I	GGYRCC	3 cut(s)	517, 1438, 2235
BsrDI	GCAATG	2 cut(s)	1397, 2369
BsrGI	TGTACA	1 cut(s)	409
BsrI	ACTGG	8 cut(s)	255, 567, 574, 667, 1366, 1469, 2094, 2302
BssECI	CCNNGG	4 cut(s)	988, 1158, 1844, 2035
BssHII	GCGCGC	1 cut(s)	130
BssSI	CACGAG	1 cut(s)	330
BssT1I	CCWWGG	3 cut(s)	1158, 1844, 2035
Bst2BI	CACGAG	1 cut(s)	330
Bst2UI	CCWGG	4 cut(s)	23, 51, 548, 675
Bst4CI	ACNGT	4 cut(s)	47, 188, 1628, 1897
Bst6I	CTCTTC	2 cut(s)	139, 1103
BstAPI	GCANNNNNTGC	1 cut(s)	314
BstAUI	TGTACA	1 cut(s)	409
BstBAI	YACGTR	1 cut(s)	901
BstC8I	GCNNGC	5 cut(s)	132, 680, 1047, 1746, 2098
BstDEI	CTNAG	9 cut(s)	271, 765, 837, 972, 1269, 1371, 1822, 2279, 2373
BstDSI	CCRYGG	1 cut(s)	1158
BstFNI	CGCG	3 cut(s)	132, 1940, 1942
BstH2I	RGCGCY	1 cut(s)	22
BstHHI	GCGC	4 cut(s)	21, 132, 134, 1942
BstMAI	GTCTC	3 cut(s)	1580, 1667, 2141
BstMWI	GCNNNNNNNGC	7 cut(s)	16, 63, 227, 314, 348, 1323, 2233
BstNI	CCWGG	4 cut(s)	23, 51, 548, 675
BstNSI	RCATGY	2 cut(s)	61, 1049
BstPAI	GACNNNNGTC	1 cut(s)	198
BstSCI	CCNGG	5 cut(s)	21, 49, 546, 673, 961
BstSFI	CTRYAG	3 cut(s)	486, 729, 1545
BstSLI	GKGCMC	2 cut(s)	1441, 2238
BstUI	CGCG	3 cut(s)	132, 1940, 1942
BstV1I	GCAGC	6 cut(s)	28, 41, 208, 230, 465, 936
BstX2I	RGATCY	2 cut(s)	646, 2068
BstXI	CCANNNNNNTGG	2 cut(s)	29, 674
BstYI	RGATCY	2 cut(s)	646, 2068
Bsu36I	CCTNAGG	1 cut(s)	972
BsuRI	GGCC	4 cut(s)	678, 763, 1221, 2290
BtgI	CCRYGG	1 cut(s)	1158
BtsI	GCAGTG	3 cut(s)	934, 1300, 2150
Cac8I	GCNNGC	5 cut(s)	132, 680, 1047, 1746, 2098
CaiI	CAGNNNCTG	2 cut(s)	224, 2128
CciI	TCATGA	2 cut(s)	933, 2026
CfoI	GCGC	4 cut(s)	21, 132, 134, 1942
Cfr13I	GGNCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
Csp6I	GTAC	4 cut(s)	258, 390, 410, 834
CspCI	CAANNNNNGTGG	2 cut(s)	1289, 1324
CviQI	GTAC	4 cut(s)	258, 390, 410, 834
DdeI	CTNAG	9 cut(s)	271, 765, 837, 972, 1269, 1371, 1822, 2279, 2373
DraI	TTTAAA	1 cut(s)	634
DraIII	CACNNNGTG	1 cut(s)	2376
EaeI	YGGCCR	1 cut(s)	1219
Eam1104I	CTCTTC	2 cut(s)	139, 1103
EarI	CTCTTC	2 cut(s)	139, 1103
Ecl136II	GAGCTC	1 cut(s)	1851
Eco130I	CCWWGG	3 cut(s)	1158, 1844, 2035
Eco147I	AGGCCT	1 cut(s)	763
Eco24I	GRGCYC	1 cut(s)	1853
Eco32I	GATATC	1 cut(s)	913
Eco47I	GGWCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
Eco53kI	GAGCTC	1 cut(s)	1851
Eco57I	CTGAAG	1 cut(s)	402
Eco81I	CCTNAGG	1 cut(s)	972
EcoICRI	GAGCTC	1 cut(s)	1851
EcoO109I	RGGNCCY	2 cut(s)	1651, 2032
EcoRI	GAATTC	1 cut(s)	1979
EcoRII	CCWGG	4 cut(s)	21, 49, 546, 673
EcoRV	GATATC	1 cut(s)	913
EcoT14I	CCWWGG	3 cut(s)	1158, 1844, 2035
EcoT22I	ATGCAT	3 cut(s)	75, 1047, 2216
EcoT38I	GRGCYC	1 cut(s)	1853
ErhI	CCWWGG	3 cut(s)	1158, 1844, 2035
FalI	AAGNNNNNCTT	4 cut(s)	940, 972, 1082, 1114
FaqI	GGGAC	4 cut(s)	447, 1176, 2053, 2381
FauNDI	CATATG	1 cut(s)	75
FbaI	TGATCA	2 cut(s)	1297, 2116
Fnu4HI	GCNGC	6 cut(s)	17, 55, 219, 222, 454, 925
FriOI	GRGCYC	1 cut(s)	1853
Fsp4HI	GCNGC	6 cut(s)	17, 55, 219, 222, 454, 925
GlaI	GCGC	4 cut(s)	20, 131, 133, 1941
GluI	GCNGC	6 cut(s)	17, 55, 219, 222, 454, 925
GsaI	CCCAGC	1 cut(s)	468
GsuI	CTGGAG	2 cut(s)	620, 2111
HaeII	RGCGCY	1 cut(s)	22
HaeIII	GGCC	4 cut(s)	678, 763, 1221, 2290
HapII	CCGG	5 cut(s)	135, 962, 1102, 1148, 2291
HhaI	GCGC	4 cut(s)	21, 132, 134, 1942
Hin6I	GCGC	4 cut(s)	19, 130, 132, 1940
HinP1I	GCGC	4 cut(s)	19, 130, 132, 1940
HincII	GTYRAC	1 cut(s)	1642
HindII	GTYRAC	1 cut(s)	1642
HindIII	AAGCTT	2 cut(s)	361, 949
HpaII	CCGG	5 cut(s)	135, 962, 1102, 1148, 2291
HphI	GGTGA	5 cut(s)	920, 977, 1691, 2111, 2354
Hpy166II	GTNNAC	4 cut(s)	1486, 1642, 1900, 1927
Hpy8I	GTNNAC	4 cut(s)	1486, 1642, 1900, 1927
HpyAV	CCTTC	8 cut(s)	426, 814, 1060, 1092, 1122, 1365, 1380, 1820
HpyCH4III	ACNGT	4 cut(s)	47, 188, 1628, 1897
HpyCH4IV	ACGT	2 cut(s)	195, 900
HpyF10VI	GCNNNNNNNGC	7 cut(s)	16, 63, 227, 314, 348, 1323, 2233
HpyF3I	CTNAG	9 cut(s)	271, 765, 837, 972, 1269, 1371, 1822, 2279, 2373
HpySE526I	ACGT	2 cut(s)	195, 900
HspAI	GCGC	4 cut(s)	19, 130, 132, 1940
Kpn2I	TCCGGA	2 cut(s)	1101, 1147
Ksp22I	TGATCA	2 cut(s)	1297, 2116
LmnI	GCTCC	4 cut(s)	63, 1323, 1848, 1856
Lsp1109I	GCAGC	6 cut(s)	28, 41, 208, 230, 465, 936
LweI	GCATC	9 cut(s)	143, 217, 317, 1438, 1455, 1564, 1892, 2201, 2223
MaeII	ACGT	2 cut(s)	195, 900
MaeIII	GTNAC	6 cut(s)	191, 569, 853, 983, 1251, 1286
MboII	GAAGA	9 cut(s)	156, 221, 347, 503, 948, 1090, 1242, 1355, 2234
MfeI	CAATTG	2 cut(s)	11, 1755
MflI	RGATCY	2 cut(s)	646, 2068
MhlI	GDGCHC	4 cut(s)	773, 1441, 1853, 2238
MlyI	GAGTC	5 cut(s)	20, 156, 1259, 1289, 1874
MmeI	TCCRAC	2 cut(s)	2289, 2330
Mph1103I	ATGCAT	3 cut(s)	75, 1047, 2216
MroI	TCCGGA	2 cut(s)	1101, 1147
MroXI	GAANNNNTTC	1 cut(s)	1350
MslI	CAYNNNNRTG	3 cut(s)	382, 1860, 1920
MspA1I	CMGCKG	1 cut(s)	221
MspI	CCGG	5 cut(s)	135, 962, 1102, 1148, 2291
MspR9I	CCNGG	5 cut(s)	23, 51, 548, 675, 963
MunI	CAATTG	2 cut(s)	11, 1755
Mva1269I	GAATGC	1 cut(s)	1372
MvaI	CCWGG	4 cut(s)	23, 51, 548, 675
MvnI	CGCG	3 cut(s)	132, 1940, 1942
MwoI	GCNNNNNNNGC	7 cut(s)	16, 63, 227, 314, 348, 1323, 2233
NciI	CCSGG	1 cut(s)	963
NcoI	CCATGG	1 cut(s)	1158
NdeI	CATATG	1 cut(s)	75
NheI	GCTAGC	1 cut(s)	1744
NlaIV	GGNNCC	4 cut(s)	65, 519, 1440, 2237
NmuCI	GTSAC	5 cut(s)	191, 569, 853, 983, 1251
NsiI	ATGCAT	3 cut(s)	75, 1047, 2216
NspI	RCATGY	2 cut(s)	61, 1049
OliI	CACNNNNGTG	1 cut(s)	1920
PaeI	GCATGC	1 cut(s)	1049
PagI	TCATGA	2 cut(s)	933, 2026
PauI	GCGCGC	1 cut(s)	130
PceI	AGGCCT	1 cut(s)	763
PctI	GAATGC	1 cut(s)	1372
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	7 cut(s)	737, 863, 997, 1390, 1729, 1871, 1973
Pfl23II	CGTACG	1 cut(s)	389
PflMI	CCANNNNNTGG	3 cut(s)	351, 1217, 2308
PkrI	GCNGC	6 cut(s)	18, 56, 220, 223, 455, 926
PleI	GAGTC	5 cut(s)	20, 155, 1258, 1288, 1873
PpsI	GAGTC	5 cut(s)	20, 155, 1258, 1288, 1873
Ppu21I	YACGTR	1 cut(s)	901
PpuMI	RGGWCCY	2 cut(s)	1651, 2032
PshAI	GACNNNNGTC	1 cut(s)	198
Psp124BI	GAGCTC	1 cut(s)	1853
Psp5II	RGGWCCY	2 cut(s)	1651, 2032
Psp6I	CCWGG	4 cut(s)	21, 49, 546, 673
PspFI	CCCAGC	1 cut(s)	464
PspGI	CCWGG	4 cut(s)	21, 49, 546, 673
PspLI	CGTACG	1 cut(s)	389
PspN4I	GGNNCC	4 cut(s)	65, 519, 1440, 2237
PspPI	GGNCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
PspPPI	RGGWCCY	2 cut(s)	1651, 2032
PstNI	CAGNNNCTG	2 cut(s)	224, 2128
PsuI	RGATCY	2 cut(s)	646, 2068
PteI	GCGCGC	1 cut(s)	130
PvuII	CAGCTG	1 cut(s)	221
RsaI	GTAC	4 cut(s)	259, 391, 411, 835
RsaNI	GTAC	4 cut(s)	258, 390, 410, 834
RseI	CAYNNNNRTG	3 cut(s)	382, 1860, 1920
SacI	GAGCTC	1 cut(s)	1853
SatI	GCNGC	6 cut(s)	17, 55, 219, 222, 454, 925
Sau96I	GGNCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
SchI	GAGTC	5 cut(s)	20, 156, 1259, 1289, 1874
ScrFI	CCNGG	5 cut(s)	23, 51, 548, 675, 963
SduI	GDGCHC	4 cut(s)	773, 1441, 1853, 2238
SfaNI	GCATC	9 cut(s)	143, 217, 317, 1438, 1455, 1564, 1892, 2201, 2223
SfcI	CTRYAG	3 cut(s)	486, 729, 1545
SinI	GGWCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
SmiMI	CAYNNNNRTG	3 cut(s)	382, 1860, 1920
SmlI	CTYRAG	7 cut(s)	744, 867, 2003, 2156, 2203, 2284, 2393
SmoI	CTYRAG	7 cut(s)	744, 867, 2003, 2156, 2203, 2284, 2393
SpeI	ACTAGT	1 cut(s)	458
SphI	GCATGC	1 cut(s)	1049
SseBI	AGGCCT	1 cut(s)	763
SsiI	CCGC	1 cut(s)	1938
SspI	AATATT	2 cut(s)	757, 1636
SstI	GAGCTC	1 cut(s)	1853
StuI	AGGCCT	1 cut(s)	763
StyD4I	CCNGG	5 cut(s)	21, 49, 546, 673, 961
StyI	CCWWGG	3 cut(s)	1158, 1844, 2035
TaaI	ACNGT	4 cut(s)	47, 188, 1628, 1897
TaiI	ACGT	2 cut(s)	198, 903
TatI	WGTACW	2 cut(s)	257, 409
TfiI	GAWTC	7 cut(s)	737, 863, 997, 1390, 1729, 1871, 1973
TseFI	GTSAC	5 cut(s)	191, 569, 853, 983, 1251
TseI	GCWGC	6 cut(s)	16, 54, 218, 221, 453, 924
Tsp45I	GTSAC	5 cut(s)	191, 569, 853, 983, 1251
TspGWI	ACGGA	1 cut(s)	2207
Van91I	CCANNNNNTGG	3 cut(s)	351, 1217, 2308
VpaK11BI	GGWCC	6 cut(s)	801, 1486, 1651, 2032, 2056, 2299
XapI	RAATTY	5 cut(s)	212, 623, 685, 1376, 1979
XceI	RCATGY	2 cut(s)	61, 1049
XcmI	CCANNNNNNNNNTGG	2 cut(s)	57, 898
XmaJI	CCTAGG	1 cut(s)	1844
XmnI	GAANNNNTTC	1 cut(s)	1350
Zsp2I	ATGCAT	3 cut(s)	75, 1047, 2216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.