RLG00000035723

Domain of unknown function (DUF4378)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0008856
Physical Location & Seq
Forward (+)
70869344 .. 70873937
4594 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035723

Sequence Viewer

Length: 2232 bp
ATGAGAAAGCAATTGCAGCGCCAGGACACGGGATTTCCGAGCAGTCATCAAGGCTGCATGTGGAGCCTGATGCATATCCTTGATTACCATCGTTGGCATAGTGTCAAGAAGATGCTTCCAGGCCGAAAGCACGGTAGAGGAAGAATCAGAGATAGTGGAAGTCGAAAAACAACTTTGAAAAACCGCGACAATGGTGAAAAGAAAGAGTTGAGTGCTGAGGCTGAACCCTTGCTGGTCAAACAGAATGGTAAAGAAACGAGCTCTGCAAAGAAAAAGTCTAAGAAATCTCAACTAAAGGCATCAAAAGCTAAACAGGCAATTTCTCCAGAAAAAGTCATGGAGTCCTCACCAAGCAAGAAGCCAATAACAAGTAATCAGCTGAAAAAAGACATTTCCGACGACCAGTTTTATGATCATGTTGATCTGTTGGATCTAATCAAGGCAAACAAGGAATTTTTCTTAAAATTCCTTCAAGATCGGGATGTTAACAGAAACCAGTTTCCGGGCCTGCACAAGTCCAATACCAAAGTAAGATTAACAAAATCAAGTTCATTTCCTGTAGCTGATTCGTCTAGAGCTATAAGTGTTATGCCTAGCACACTAAAGCACAAGCAGAATGAAATCTGGTCCTTCCCAAAGGGAGAAAAACTTTTGGCTAGTACTCGGGCGCCAAAACTAGTGACATCCGAATCTCAAGAGGACCTGCCTGAGGGATTTAGATATCAAGGGTGGAATCAATTGGTCGTGAGTCGATTTAAAGATATAAAGCAGAAGCTAATGCATGCACCGCAGGAGAGCAAGAAGGGAGATACTCCCACTTCCACTGAAACGCTCATCCCTGAAGACCCTTCTGGATGTGATGGTAAAGAAATGTGTGAAACACCAGAGATGATCACTGGTGAAGAGAGAAGCAAGATTGATGGTTTGGATGATACTCTTGGAAAACGAAAATGCCGTGTAAGTAGAACCTCCTCTCTAGATGAGTCACTCGATAGATATAGTCAGTTGTTTGAGAGTAGTTGCAGAAGTGAGGCCAAGTTGCATCACTCCATGAGTTTAAAGTTAAGAAGTGAAGAAAAAGTTACTTCAACAGGGAATGCTCAGAAATCCATCAGAAGAAATCTATCACTACCTGACCTTGACTCTTTGTGTTCCTTTCTAAATGGGCCACCTAGAGATGCTTTTCGCTTAGGGATTCCGGTTAAAAATGTAGTGGACCACAAGACAAGTAAGGAAAATGATAGTCATATTGGTCCCAAGTCGGCGAGCCTTAATGTAGATACAGGTAAGTCGGAAGGACTAGAAGCTATTTTAGAGACAGAGTTCCAGAATAGCATAGAAGAACAAAGTGACAGAGAGGTAGAAGAACAAAGTGACAGAGAGGACCTTCATGAGTATGTAGTTGAGCCAGAAGAAGAAGAAGAAGAAAGCCGAACTCATGAGCAACGAGACATTGGTTTTACGATGAGTCCTGAAGGAGAGAATGCACGACCAAGTGAAAGTTGTACTCTTGAATCTTATTCTTTAGAGTTGTCAATCTCAGAAGAACTCTGCAGCAGTGCAAAGTGTGAGCAAACTGAAATCGAACAGACGAATGTGGACCATCACTCCTCACAATTTGTAGACAAAATGGATGATCCTGAACTCAACTATGTTAGAGATGTTCTTGAGCTGTCAGGTTTCATGGGAAATGAATACCTTGGAACATGGTACTCCATGGACCAGCCTTTGGATCCTTCAGTGTTCAAGGAATTGCAGGCTCGATTTCAGCATCAACTTGATTTTACTGGAAATTGGGATCACCAGCTTCTTTTTGATTTAGTGAATGAGACACTCCTTGATATCCATGAGAGATCATACACCTACTTCCCAAGGGCCTTGTCCTTCAGTGGCTCCAAACACCGTCCAATGCGGAAAGGGCAGCATCTTCTTGAAGATGTGTGGACAAGGATTAGCTCACATATGAGCTTCAGGCCAGAGCTGGTCCAGTCATTGAATGATATCTTGGCTCGAGATTTGGCGAAGGGCGATACTTGGATGAACCTTCAATGGGAAACCGAGTGTGTGGCACTCGAACTTGAGGATTTGATCTTTGAAGAACTAGTAGATGAAGTTATCTACTCTCACTCATTTCACCTCTCTCTCTCTCTCTCTAACGCAAATTGTAGCAAGCCTCAGTCCTACCTACTCTCTAATCTCACAGCGACGCAAAAGCAGGCAATCCAAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3741 DUF4378

Protein Analysis

744

Amino Acids

84.84

Weight (kDa)

5.75

Isoelectric Point (pI)

53.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF4378 PF14309 548 - 704 7.4e-42 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 667
AccB7I CCANNNNNTGG 1 cut(s) 1729
AccI GTMKAC 1 cut(s) 1623
AccII CGCG 1 cut(s) 186
AciI CCGC 3 cut(s) 184, 788, 1912
AclWI GGATC 5 cut(s) 438, 1631, 1727, 1740, 1806
AcsI RAATTY 2 cut(s) 452, 464
AcuI CTGAAG 5 cut(s) 861, 1494, 1722, 1870, 1954
AcyI GRCGYC 1 cut(s) 668
AfaI GTAC 3 cut(s) 661, 1507, 1712
AfiI CCNNNNNNNGG 5 cut(s) 28, 502, 709, 1729, 2050
AgsI TTSAA 9 cut(s) 178, 473, 1089, 1514, 1747, 1934, 1996, 2048, 2096
AhlI ACTAGT 2 cut(s) 676, 2101
AjnI CCWGG 2 cut(s) 21, 118
AjuI GAANNNNNNNTTGG 2 cut(s) 1988, 2020
Alw21I GWGCWC 1 cut(s) 263
Alw26I GTCTC 3 cut(s) 1310, 1443, 1823
AlwI GGATC 5 cut(s) 438, 1631, 1727, 1740, 1806
Ama87I CYCGRG 2 cut(s) 663, 2010
AoxI GGCC 6 cut(s) 121, 505, 1032, 1166, 1875, 1973
ApeKI GCWGC 4 cut(s) 16, 54, 1554, 1921
ApoI RAATTY 2 cut(s) 452, 464
ArsI GACNNNNNNTTYG 2 cut(s) 260, 292
AspLEI GCGC 2 cut(s) 21, 670
AsuC2I CCSGG 1 cut(s) 504
AsuHPI GGTGA 5 cut(s) 206, 339, 911, 1793, 2126
AvaI CYCGRG 2 cut(s) 663, 2010
AvaII GGWCC 8 cut(s) 627, 700, 1216, 1253, 1384, 1600, 1720, 1984
AxyI CCTNAGG 1 cut(s) 708
BamHI GGATCC 1 cut(s) 1732
BanI GGYRCC 1 cut(s) 667
BanII GRGCYC 1 cut(s) 263
BbsI GAAGAC 1 cut(s) 849
Bbv12I GWGCWC 1 cut(s) 263
BbvCI CCTCAGC 1 cut(s) 216
BbvI GCAGC 4 cut(s) 28, 41, 1566, 1933
BccI CCATC 5 cut(s) 96, 854, 914, 1118, 1611
BceAI ACGGC 1 cut(s) 939
BciT130I CCWGG 2 cut(s) 23, 120
BclI TGATCA 2 cut(s) 412, 891
BcnI CCSGG 1 cut(s) 504
BcoDI GTCTC 3 cut(s) 1310, 1443, 1823
BcuI ACTAGT 2 cut(s) 676, 2101
BfaI CTAG 9 cut(s) 573, 594, 657, 677, 977, 1173, 1301, 2102, 2230
BfmI CTRYAG 2 cut(s) 558, 1552
BfoI RGCGCY 2 cut(s) 22, 671
BfuAI ACCTGC 1 cut(s) 711
BisI GCNGC 4 cut(s) 17, 55, 1555, 1922
BlsI GCNGC 4 cut(s) 18, 56, 1556, 1923
BmcAI AGTACT 1 cut(s) 661
Bme1390I CCNGG 3 cut(s) 23, 120, 504
Bme18I GGWCC 8 cut(s) 627, 700, 1216, 1253, 1384, 1600, 1720, 1984
BmeT110I CYCGRG 2 cut(s) 663, 2010
BmiI GGNNCC 5 cut(s) 65, 669, 1255, 1734, 1894
BmrFI CCNGG 3 cut(s) 23, 120, 504
BmsI GCATC 7 cut(s) 60, 102, 308, 1051, 1168, 1780, 1933
BpiI GAAGAC 1 cut(s) 849
BpmI CTGGAG 1 cut(s) 309
Bpu10I CCTNAGC 2 cut(s) 216, 1189
BpuEI CTTGAG 3 cut(s) 678, 1688, 2099
BpuMI CCSGG 1 cut(s) 504
BsaBI GATNNNNATC 2 cut(s) 74, 87
BsaHI GRCGYC 1 cut(s) 668
BsaJI CCNNGG 3 cut(s) 1699, 1716, 1871
BsaWI WCCGGW 1 cut(s) 1198
BsaXI ACNNNNNCTCC 2 cut(s) 1592, 1622
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 502, 709, 1729, 2050
Bse1I ACTGG 5 cut(s) 403, 496, 901, 1792, 1987
Bse21I CCTNAGG 1 cut(s) 708
Bse8I GATNNNNATC 2 cut(s) 74, 87
BseBI CCWGG 2 cut(s) 23, 120
BseDI CCNNGG 3 cut(s) 1699, 1716, 1871
BseGI GGATG 7 cut(s) 487, 683, 834, 860, 934, 1639, 2043
BseJI GATNNNNATC 2 cut(s) 74, 87
BseLI CCNNNNNNNGG 5 cut(s) 28, 502, 709, 1729, 2050
BseMII CTCAG 5 cut(s) 207, 699, 1115, 1554, 2189
BseNI ACTGG 5 cut(s) 403, 496, 901, 1792, 1987
BseRI GAGGAG 2 cut(s) 961, 1600
BseXI GCAGC 4 cut(s) 28, 41, 1566, 1933
BsgI GTGCAG 1 cut(s) 494
Bsh1236I CGCG 1 cut(s) 186
BshFI GGCC 6 cut(s) 123, 507, 1034, 1168, 1877, 1975
BshNI GGYRCC 1 cut(s) 667
BsiHKAI GWGCWC 1 cut(s) 263
BsiHKCI CYCGRG 2 cut(s) 663, 2010
BsiSI CCGG 2 cut(s) 503, 1199
BslFI GGGAC 1 cut(s) 1239
BslI CCNNNNNNNGG 5 cut(s) 28, 502, 709, 1729, 2050
BsmAI GTCTC 3 cut(s) 1310, 1443, 1823
BsmFI GGGAC 1 cut(s) 1239
BsmI GAATGC 2 cut(s) 1102, 1489
BsnI GGCC 6 cut(s) 123, 507, 1034, 1168, 1877, 1975
BsoBI CYCGRG 2 cut(s) 663, 2010
Bsp1286I GDGCHC 1 cut(s) 263
Bsp19I CCATGG 1 cut(s) 1716
BspACI CCGC 3 cut(s) 184, 788, 1912
BspANI GGCC 6 cut(s) 123, 507, 1034, 1168, 1877, 1975
BspCNI CTCAG 5 cut(s) 208, 700, 1114, 1553, 2188
BspFNI CGCG 1 cut(s) 186
BspHI TCATGA 2 cut(s) 1390, 1438
BspLI GGNNCC 5 cut(s) 65, 669, 1255, 1734, 1894
BspMAI CTGCAG 1 cut(s) 1556
BspMI ACCTGC 1 cut(s) 711
BspPI GGATC 5 cut(s) 438, 1631, 1727, 1740, 1806
BspT107I GGYRCC 1 cut(s) 667
BsrI ACTGG 5 cut(s) 403, 496, 901, 1792, 1987
BssECI CCNNGG 3 cut(s) 1699, 1716, 1871
BssNI GRCGYC 1 cut(s) 668
BssT1I CCWWGG 3 cut(s) 1699, 1716, 1871
Bst2UI CCWGG 2 cut(s) 23, 120
Bst4CI ACNGT 2 cut(s) 134, 1904
Bst6I CTCTTC 1 cut(s) 897
BstACI GRCGYC 1 cut(s) 668
BstC8I GCNNGC 6 cut(s) 509, 783, 1267, 1758, 2171, 2217
BstDEI CTNAG 7 cut(s) 216, 279, 708, 1101, 1189, 1540, 2175
BstDSI CCRYGG 1 cut(s) 1716
BstENI CCTNNNNNAGG 1 cut(s) 707
BstF5I GGATG 7 cut(s) 487, 683, 834, 860, 934, 1639, 2043
BstFNI CGCG 1 cut(s) 186
BstH2I RGCGCY 2 cut(s) 22, 671
BstHHI GCGC 2 cut(s) 21, 670
BstMAI GTCTC 3 cut(s) 1310, 1443, 1823
BstMWI GCNNNNNNNGC 6 cut(s) 16, 63, 305, 314, 787, 1918
BstNI CCWGG 2 cut(s) 23, 120
BstNSI RCATGY 2 cut(s) 61, 785
BstSCI CCNGG 3 cut(s) 21, 118, 502
BstSFI CTRYAG 2 cut(s) 558, 1552
BstUI CGCG 1 cut(s) 186
BstV1I GCAGC 4 cut(s) 28, 41, 1566, 1933
BstV2I GAAGAC 1 cut(s) 849
BstX2I RGATCY 2 cut(s) 430, 1732
BstYI RGATCY 2 cut(s) 430, 1732
Bsu36I CCTNAGG 1 cut(s) 708
BsuRI GGCC 6 cut(s) 123, 507, 1034, 1168, 1877, 1975
BtgI CCRYGG 1 cut(s) 1716
BtsCI GGATG 7 cut(s) 487, 683, 834, 860, 934, 1639, 2043
BtsI GCAGTG 1 cut(s) 1564
BtsIMutI CAGTG 5 cut(s) 822, 894, 1564, 1746, 1894
BveI ACCTGC 1 cut(s) 711
Cac8I GCNNGC 6 cut(s) 509, 783, 1267, 1758, 2171, 2217
CciI TCATGA 2 cut(s) 1390, 1438
CfoI GCGC 2 cut(s) 21, 670
CseI GACGC 1 cut(s) 2215
Csp6I GTAC 3 cut(s) 660, 1506, 1711
CviQI GTAC 3 cut(s) 660, 1506, 1711
DdeI CTNAG 7 cut(s) 216, 279, 708, 1101, 1189, 1540, 2175
DinI GGCGCC 1 cut(s) 669
DraI TTTAAA 2 cut(s) 757, 1059
Eam1104I CTCTTC 1 cut(s) 897
EarI CTCTTC 1 cut(s) 897
Ecl136II GAGCTC 1 cut(s) 261
Eco130I CCWWGG 3 cut(s) 1699, 1716, 1871
Eco24I GRGCYC 1 cut(s) 263
Eco32I GATATC 3 cut(s) 722, 1843, 2002
Eco47I GGWCC 8 cut(s) 627, 700, 1216, 1253, 1384, 1600, 1720, 1984
Eco53kI GAGCTC 1 cut(s) 261
Eco57I CTGAAG 5 cut(s) 861, 1494, 1722, 1870, 1954
Eco81I CCTNAGG 1 cut(s) 708
Eco88I CYCGRG 2 cut(s) 663, 2010
EcoICRI GAGCTC 1 cut(s) 261
EcoNI CCTNNNNNAGG 1 cut(s) 707
EcoO109I RGGNCCY 3 cut(s) 700, 1384, 1875
EcoRII CCWGG 2 cut(s) 21, 118
EcoRV GATATC 3 cut(s) 722, 1843, 2002
EcoT14I CCWWGG 3 cut(s) 1699, 1716, 1871
EcoT22I ATGCAT 2 cut(s) 75, 783
EcoT38I GRGCYC 1 cut(s) 263
EgeI GGCGCC 1 cut(s) 669
EheI GGCGCC 1 cut(s) 669
ErhI CCWWGG 3 cut(s) 1699, 1716, 1871
FaqI GGGAC 1 cut(s) 1239
FauNDI CATATG 1 cut(s) 1962
FbaI TGATCA 2 cut(s) 412, 891
FblI GTMKAC 1 cut(s) 1623
Fnu4HI GCNGC 4 cut(s) 17, 55, 1555, 1922
FokI GGATG 7 cut(s) 494, 670, 821, 867, 941, 1646, 2050
FriOI GRGCYC 1 cut(s) 263
Fsp4HI GCNGC 4 cut(s) 17, 55, 1555, 1922
FspBI CTAG 9 cut(s) 573, 594, 657, 677, 977, 1173, 1301, 2102, 2230
GlaI GCGC 2 cut(s) 20, 669
GluI GCNGC 4 cut(s) 17, 55, 1555, 1922
GsuI CTGGAG 1 cut(s) 309
HaeII RGCGCY 2 cut(s) 22, 671
HaeIII GGCC 6 cut(s) 123, 507, 1034, 1168, 1877, 1975
HapII CCGG 2 cut(s) 503, 1199
HgaI GACGC 1 cut(s) 2215
HhaI GCGC 2 cut(s) 21, 670
Hin1I GRCGYC 1 cut(s) 668
Hin6I GCGC 2 cut(s) 19, 668
HinP1I GCGC 2 cut(s) 19, 668
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HpaI GTTAAC 1 cut(s) 487
HpaII CCGG 2 cut(s) 503, 1199
HphI GGTGA 5 cut(s) 206, 339, 911, 1793, 2126
Hpy166II GTNNAC 5 cut(s) 487, 1216, 1600, 1624, 1944
Hpy188I TCNGA 8 cut(s) 39, 149, 397, 688, 1104, 1115, 1294, 1543
Hpy8I GTNNAC 5 cut(s) 487, 1216, 1600, 1624, 1944
Hpy99I CGWCG 2 cut(s) 401, 2209
HpyCH4III ACNGT 2 cut(s) 134, 1904
HpyF10VI GCNNNNNNNGC 6 cut(s) 16, 63, 305, 314, 787, 1918
HpyF3I CTNAG 7 cut(s) 216, 279, 708, 1101, 1189, 1540, 2175
Hsp92I GRCGYC 1 cut(s) 668
HspAI GCGC 2 cut(s) 19, 668
KasI GGCGCC 1 cut(s) 667
Ksp22I TGATCA 2 cut(s) 412, 891
KspAI GTTAAC 1 cut(s) 487
LmnI GCTCC 2 cut(s) 63, 1898
Lsp1109I GCAGC 4 cut(s) 28, 41, 1566, 1933
LweI GCATC 7 cut(s) 60, 102, 308, 1051, 1168, 1780, 1933
MaeI CTAG 9 cut(s) 573, 594, 657, 677, 977, 1173, 1301, 2102, 2230
MaeIII GTNAC 5 cut(s) 679, 984, 1081, 1349, 1373
MfeI CAATTG 2 cut(s) 11, 737
MflI RGATCY 2 cut(s) 430, 1732
MhlI GDGCHC 1 cut(s) 263
MluCI AATT 9 cut(s) 11, 318, 452, 464, 737, 1616, 1751, 1792, 2161
Mly113I GGCGCC 1 cut(s) 668
MlyI GAGTC 5 cut(s) 350, 757, 992, 1136, 1477
MmeI TCCRAC 3 cut(s) 408, 420, 1272
Mph1103I ATGCAT 2 cut(s) 75, 783
MseI TTAA 8 cut(s) 461, 486, 536, 756, 1058, 1064, 1203, 1272
MslI CAYNNNNRTG 1 cut(s) 1395
MspA1I CMGCKG 1 cut(s) 379
MspI CCGG 2 cut(s) 503, 1199
MspR9I CCNGG 3 cut(s) 23, 120, 504
MunI CAATTG 2 cut(s) 11, 737
Mva1269I GAATGC 2 cut(s) 1102, 1489
MvaI CCWGG 2 cut(s) 23, 120
MvnI CGCG 1 cut(s) 186
MwoI GCNNNNNNNGC 6 cut(s) 16, 63, 305, 314, 787, 1918
NarI GGCGCC 1 cut(s) 668
NciI CCSGG 1 cut(s) 504
NcoI CCATGG 1 cut(s) 1716
NdeI CATATG 1 cut(s) 1962
NlaIV GGNNCC 5 cut(s) 65, 669, 1255, 1734, 1894
NmuCI GTSAC 4 cut(s) 679, 984, 1349, 1373
NsiI ATGCAT 2 cut(s) 75, 783
NspI RCATGY 2 cut(s) 61, 785
PaeI GCATGC 1 cut(s) 785
PaeR7I CTCGAG 1 cut(s) 2010
PagI TCATGA 2 cut(s) 1390, 1438
PcsI WCGNNNNNNNCGW 2 cut(s) 35, 952
PctI GAATGC 2 cut(s) 1102, 1489
PfeI GAWTC 6 cut(s) 144, 566, 689, 733, 1195, 1514
PflMI CCANNNNNTGG 1 cut(s) 1729
PkrI GCNGC 4 cut(s) 18, 56, 1556, 1923
PleI GAGTC 5 cut(s) 349, 756, 991, 1136, 1476
PluTI GGCGCC 1 cut(s) 671
PpsI GAGTC 5 cut(s) 349, 756, 991, 1136, 1476
PpuMI RGGWCCY 2 cut(s) 700, 1384
Psp124BI GAGCTC 1 cut(s) 263
Psp5II RGGWCCY 2 cut(s) 700, 1384
Psp6I CCWGG 2 cut(s) 21, 118
PspGI CCWGG 2 cut(s) 21, 118
PspN4I GGNNCC 5 cut(s) 65, 669, 1255, 1734, 1894
PspPPI RGGWCCY 2 cut(s) 700, 1384
PstI CTGCAG 1 cut(s) 1556
PsuI RGATCY 2 cut(s) 430, 1732
PvuII CAGCTG 1 cut(s) 379
RsaI GTAC 3 cut(s) 661, 1507, 1712
RsaNI GTAC 3 cut(s) 660, 1506, 1711
RseI CAYNNNNRTG 1 cut(s) 1395
SacI GAGCTC 1 cut(s) 263
SaqAI TTAA 8 cut(s) 461, 486, 536, 756, 1058, 1064, 1203, 1272
SatI GCNGC 4 cut(s) 17, 55, 1555, 1922
ScaI AGTACT 1 cut(s) 661
SchI GAGTC 5 cut(s) 350, 757, 992, 1136, 1477
ScrFI CCNGG 3 cut(s) 23, 120, 504
SduI GDGCHC 1 cut(s) 263
SfaNI GCATC 7 cut(s) 60, 102, 308, 1051, 1168, 1780, 1933
SfcI CTRYAG 2 cut(s) 558, 1552
SfoI GGCGCC 1 cut(s) 669
Sfr274I CTCGAG 1 cut(s) 2010
SinI GGWCC 8 cut(s) 627, 700, 1216, 1253, 1384, 1600, 1720, 1984
SlaI CTCGAG 1 cut(s) 2010
SmiMI CAYNNNNRTG 1 cut(s) 1395
SmlI CTYRAG 4 cut(s) 693, 1667, 2010, 2078
SmoI CTYRAG 4 cut(s) 693, 1667, 2010, 2078
SpeI ACTAGT 2 cut(s) 676, 2101
SphI GCATGC 1 cut(s) 785
Sse9I AATT 9 cut(s) 11, 318, 452, 464, 737, 1616, 1751, 1792, 2161
SsiI CCGC 3 cut(s) 184, 788, 1912
SspDI GGCGCC 1 cut(s) 667
SspMI CTAG 9 cut(s) 573, 594, 657, 677, 977, 1173, 1301, 2102, 2230
SstI GAGCTC 1 cut(s) 263
StyD4I CCNGG 3 cut(s) 21, 118, 502
StyI CCWWGG 3 cut(s) 1699, 1716, 1871
TaaI ACNGT 2 cut(s) 134, 1904
TaqI TCGA 7 cut(s) 163, 751, 990, 1584, 1762, 2011, 2073
TasI AATT 9 cut(s) 11, 318, 452, 464, 737, 1616, 1751, 1792, 2161
TatI WGTACW 2 cut(s) 659, 1505
TfiI GAWTC 6 cut(s) 144, 566, 689, 733, 1195, 1514
Tru1I TTAA 8 cut(s) 461, 486, 536, 756, 1058, 1064, 1203, 1272
Tru9I TTAA 8 cut(s) 461, 486, 536, 756, 1058, 1064, 1203, 1272
TscAI CASTG 5 cut(s) 829, 901, 1564, 1746, 1894
TseFI GTSAC 4 cut(s) 679, 984, 1349, 1373
TseI GCWGC 4 cut(s) 16, 54, 1554, 1921
Tsp45I GTSAC 4 cut(s) 679, 984, 1349, 1373
TspDTI ATGAA 7 cut(s) 540, 633, 1379, 1672, 1707, 2054, 2124
TspRI CASTG 5 cut(s) 829, 901, 1564, 1746, 1894
Van91I CCANNNNNTGG 1 cut(s) 1729
VpaK11BI GGWCC 8 cut(s) 627, 700, 1216, 1253, 1384, 1600, 1720, 1984
XagI CCTNNNNNAGG 1 cut(s) 707
XapI RAATTY 2 cut(s) 452, 464
XbaI TCTAGA 2 cut(s) 572, 976
XceI RCATGY 2 cut(s) 61, 785
XhoI CTCGAG 1 cut(s) 2010
XmiI GTMKAC 1 cut(s) 1623
XspI CTAG 9 cut(s) 573, 594, 657, 677, 977, 1173, 1301, 2102, 2230
ZrmI AGTACT 1 cut(s) 661
Zsp2I ATGCAT 2 cut(s) 75, 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.