Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001125.1

Orthogroup ID

OG0008856

Physical Location & Seq

Genomic Coordinates Reverse (-)

15042 .. 17941

Gene Structure 2900 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001125.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

atgagaaagcaattgcagcgacaggacacgggatttccgagcagtcatcaaggctgcatgtggagcctgatgcatatccttgattaccatcgttggcatagtgtcaagaagatgcttccaggccgaaagcacggcagaggaagaatcagaggtagtggaagtcgaaaagcaactttgaaaaaccacgacaatggtgaaaagaaagagttgagtgctgaagctgaacccttgcaggtcaaacagaatggtaaagaaacgagctctgcaaggaaaaagtccaagaaatctcaactaaaggcatcaaaagctaaacaggtatgtaaagaagaaagccacaaaagatggattgtaagcttctctgggcaaccatggttgtggagaactagtgaaatgcatgatgcaaagccttcagatgatttttcgaaggcgccttatgagttagttgcatctaatgaaaactgtaccctggaacaggcaatttctccagaaaaagtcatggagtcctcaccaagcaagaagccaataacaagtaatcagctgaaaaaagacatttcccacgatcagttttatgatcatgttgatcttttggagctaatcaaggcaaacaaggaatttttctttaaattccttcaagatccagatgttaacagaaaccagtttccgggcctgcacaagtccaataccaaagtaagattaacaaaatcaagttcatttcctgtagctgattcgtctagagctataagtgttatgcctagcacactaaaacacaagcagaatgaaatctggtccttcccaaagggagaaaaacttcttgctagtactcggtcgccaaaattagtgacattcgaatctcaagaggacctccctgagggatttagatatcaagggtggaatcaattggttgtgagtcgttttaaagatataaagcagaagctaatgcatgcaccgcaggagagcaagaagggaaatactcccacttccactgaaacactcatccctgaagacccttctggatgtgatggtaatgaaatgtatgaaacaccagagatgatcactggtgaagagagaagcaagattgatggtttggatgatactcttggaaagcgaaaacgccgtgtaagtagaacctcctctctagatgagtcactcaatagatatagtcagttgtttgagagtagttgcagaagtgaggccaagttgcatcactccatgagtttaaagttaagaagtgaagaaaaagttacttcaactgggaatgctcagaaatccaccagaagaaatctgtcactacctgaccttgactctttgtgttcctttctaaatgggccacctagagatgcttttcgcttagggattccggttaaaaatgtagtggaccacaagacaagtaaggaaaatgatagtcatattggtcccaagtcggcgagccttaatgtagatacaggtaagtctgaaggactagaagctattttagagacagagttccagaatggcatagaagaacaaagtgacagagaggaccttcatgagtatgtagttgagccagaagaagaagaagaagaagaagaaagccgaactcatgagcaacgaaacattggttttacgatgagtcttgagggagagaacgcacaaccaagtgaaagttgtactcttgaatcttattcttcagagttgtcaatctcagaagaactctgcagcagtgcaaagtgtgagcaaactgaaatcgaacagacgaatgtggatcatcacgcctcacaatttgtagacaaaatggatgatcctgaactcaactatgttagagatgttcttgagctgtcaggtttcatgggaaatgaataccttggaacatggtactccatggaccagcctttggatccttcagtattcaaggaattggaggctcgatttcagcatcaactcgattttactggaaattgggatcaccagcttctttttgatttagtgaatgagacactccttgatatccatgagagatcatacacctacttcccaagggccttgtccttcagtggctccaaacaccgtccaatgccgaaagggcagcatcttcttgaagatgtgtggacaaggattagctcacatatgagcttcaggccagagctggtccagtcattggatgatatcttggctcgagatttggcgaaggccgatacttggatgaaccttcaatgggaaactgagtgtgtggcactcgaacttgaggatttgatctttgaagaactattagatgaagttatctgtagttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378

Protein Analysis

755

Amino Acids

86.42

Weight (kDa)

5.62

Isoelectric Point (pI)

58.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008856)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g36010 FvH4_3g36010 FvH4_3g36010
malus_domestica	MD11G1109700.v1.1
prunus_persica	Prupe.6G078200_v2.0.a1 Prupe.6G078200_v2.0.a1
pyrus_communis	pycom03g07730 pycom11g09050
rosa_chinensis	RchiOBHm_Chr5g0064421
rosa_laevigata	RLG00000035723
rosa_multiflora	Rmu_sc0001125.1_g000006
rosa_roxburghii	Rroxscaffold_1G00016570
rosa_rugosa	Rorug05G0364600 Rorug05G0364700.1 Rorug05G0364800 Rorug05G0364800 Rorug05G0364800 Rorug05G0364900
rosa_samantha	Rh5AG423200 Rh5BG438700 Rh5CG461400 Rh5DG452000
rosa_wichuraiana	Rw5G039780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	223
AccB1I	GGYRCC	1 cut(s)	427
AccB7I	CCANNNNNTGG	2 cut(s)	1870, 2134
AccI	GTMKAC	1 cut(s)	1764
AciI	CCGC	1 cut(s)	947
AclWI	GGATC	6 cut(s)	629, 1749, 1772, 1868, 1881, 1947
AcsI	RAATTY	2 cut(s)	611, 623
AcuI	CTGAAG	8 cut(s)	237, 393, 1020, 1473, 1650, 1863, 2011, 2095
AcyI	GRCGYC	1 cut(s)	428
AfaI	GTAC	4 cut(s)	463, 820, 1648, 1853
AfiI	CCNNNNNNNGG	7 cut(s)	472, 661, 868, 1870, 2134, 2175, 2191
AgsI	TTSAA	8 cut(s)	178, 632, 1248, 1655, 1888, 2075, 2189, 2237
AhlI	ACTAGT	1 cut(s)	383
AjnI	CCWGG	2 cut(s)	118, 465
Alw21I	GWGCWC	1 cut(s)	263
Alw26I	GTCTC	2 cut(s)	1469, 1964
AlwI	GGATC	6 cut(s)	629, 1749, 1772, 1868, 1881, 1947
Ama87I	CYCGRG	1 cut(s)	2151
AoxI	GGCC	7 cut(s)	121, 664, 1191, 1325, 2016, 2114, 2166
ApeKI	GCWGC	4 cut(s)	16, 54, 1695, 2062
ApoI	RAATTY	2 cut(s)	611, 623
Asp700I	GAANNNNTTC	1 cut(s)	807
AspLEI	GCGC	1 cut(s)	430
AsuC2I	CCSGG	1 cut(s)	663
AsuHPI	GGTGA	4 cut(s)	206, 498, 1070, 1934
AsuII	TTCGAA	2 cut(s)	422, 846
AvaI	CYCGRG	1 cut(s)	2151
AvaII	GGWCC	7 cut(s)	786, 859, 1375, 1412, 1519, 1861, 2125
AxyI	CCTNAGG	1 cut(s)	867
BamHI	GGATCC	1 cut(s)	1873
BanI	GGYRCC	1 cut(s)	427
BanII	GRGCYC	1 cut(s)	263
BbsI	GAAGAC	1 cut(s)	1008
Bbv12I	GWGCWC	1 cut(s)	263
BbvI	GCAGC	4 cut(s)	28, 41, 1707, 2074
BccI	CCATC	4 cut(s)	96, 336, 1013, 1073
BceAI	ACGGC	2 cut(s)	148, 1098
BciT130I	CCWGG	2 cut(s)	120, 467
BclI	TGATCA	2 cut(s)	571, 1050
BcnI	CCSGG	1 cut(s)	663
BcoDI	GTCTC	2 cut(s)	1469, 1964
BcuI	ACTAGT	1 cut(s)	383
BfaI	CTAG	7 cut(s)	384, 732, 753, 816, 1136, 1332, 1460
BfmI	CTRYAG	3 cut(s)	717, 1693, 2260
BfoI	RGCGCY	1 cut(s)	431
BfuAI	ACCTGC	1 cut(s)	223
BglI	GCCNNNNNGGC	1 cut(s)	2059
BisI	GCNGC	4 cut(s)	17, 55, 1696, 2063
BlsI	GCNGC	4 cut(s)	18, 56, 1697, 2064
BmcAI	AGTACT	1 cut(s)	820
Bme1390I	CCNGG	3 cut(s)	120, 467, 663
Bme18I	GGWCC	7 cut(s)	786, 859, 1375, 1412, 1519, 1861, 2125
BmeT110I	CYCGRG	1 cut(s)	2151
BmiI	GGNNCC	5 cut(s)	65, 429, 1414, 1875, 2035
BmrFI	CCNGG	3 cut(s)	120, 467, 663
BmrI	ACTGGG	1 cut(s)	1260
BmsI	GCATC	9 cut(s)	60, 102, 308, 388, 455, 1210, 1327, 1921, 2074
BmuI	ACTGGG	1 cut(s)	1260
BpiI	GAAGAC	1 cut(s)	1008
BpmI	CTGGAG	1 cut(s)	468
Bpu10I	CCTNAGC	1 cut(s)	1348
Bpu14I	TTCGAA	2 cut(s)	422, 846
BpuEI	CTTGAG	4 cut(s)	837, 1634, 1829, 2240
BpuMI	CCSGG	1 cut(s)	663
BsaBI	GATNNNNATC	2 cut(s)	74, 87
BsaHI	GRCGYC	1 cut(s)	428
BsaJI	CCNNGG	5 cut(s)	368, 465, 1840, 1857, 2012
BsaWI	WCCGGW	1 cut(s)	1357
BsaXI	ACNNNNNCTCC	2 cut(s)	370, 400
Bsc4I	CCNNNNNNNGG	7 cut(s)	472, 661, 868, 1870, 2134, 2175, 2191
Bse1I	ACTGG	5 cut(s)	655, 1060, 1255, 1933, 2128
Bse21I	CCTNAGG	1 cut(s)	867
Bse8I	GATNNNNATC	2 cut(s)	74, 87
BseBI	CCWGG	2 cut(s)	120, 467
BseDI	CCNNGG	5 cut(s)	368, 465, 1840, 1857, 2012
BseGI	GGATG	6 cut(s)	993, 1019, 1093, 1780, 2143, 2184
BseJI	GATNNNNATC	2 cut(s)	74, 87
BseLI	CCNNNNNNNGG	7 cut(s)	472, 661, 868, 1870, 2134, 2175, 2191
BseMII	CTCAG	4 cut(s)	858, 1274, 1695, 2190
BseNI	ACTGG	5 cut(s)	655, 1060, 1255, 1933, 2128
BseRI	GAGGAG	1 cut(s)	1120
BseXI	GCAGC	4 cut(s)	28, 41, 1707, 2074
BsgI	GTGCAG	1 cut(s)	653
Bsh1285I	CGRYCG	1 cut(s)	827
BshFI	GGCC	7 cut(s)	123, 666, 1193, 1327, 2018, 2116, 2168
BshNI	GGYRCC	1 cut(s)	427
BsiEI	CGRYCG	1 cut(s)	827
BsiHKAI	GWGCWC	1 cut(s)	263
BsiHKCI	CYCGRG	1 cut(s)	2151
BsiSI	CCGG	2 cut(s)	662, 1358
BslFI	GGGAC	1 cut(s)	1398
BslI	CCNNNNNNNGG	7 cut(s)	472, 661, 868, 1870, 2134, 2175, 2191
BsmAI	GTCTC	2 cut(s)	1469, 1964
BsmFI	GGGAC	1 cut(s)	1398
BsmI	GAATGC	1 cut(s)	1261
BsnI	GGCC	7 cut(s)	123, 666, 1193, 1327, 2018, 2116, 2168
BsoBI	CYCGRG	1 cut(s)	2151
Bsp119I	TTCGAA	2 cut(s)	422, 846
Bsp1286I	GDGCHC	1 cut(s)	263
Bsp19I	CCATGG	2 cut(s)	368, 1857
BspACI	CCGC	1 cut(s)	947
BspANI	GGCC	7 cut(s)	123, 666, 1193, 1327, 2018, 2116, 2168
BspCNI	CTCAG	4 cut(s)	859, 1273, 1694, 2191
BspHI	TCATGA	2 cut(s)	1525, 1579
BspLI	GGNNCC	5 cut(s)	65, 429, 1414, 1875, 2035
BspMAI	CTGCAG	1 cut(s)	1697
BspMI	ACCTGC	1 cut(s)	223
BspPI	GGATC	6 cut(s)	629, 1749, 1772, 1868, 1881, 1947
BspT104I	TTCGAA	2 cut(s)	422, 846
BspT107I	GGYRCC	1 cut(s)	427
BsrI	ACTGG	5 cut(s)	655, 1060, 1255, 1933, 2128
BssECI	CCNNGG	5 cut(s)	368, 465, 1840, 1857, 2012
BssNI	GRCGYC	1 cut(s)	428
BssT1I	CCWWGG	4 cut(s)	368, 1840, 1857, 2012
Bst2UI	CCWGG	2 cut(s)	120, 467
Bst4CI	ACNGT	2 cut(s)	461, 2045
Bst6I	CTCTTC	1 cut(s)	1056
BstACI	GRCGYC	1 cut(s)	428
BstBI	TTCGAA	2 cut(s)	422, 846
BstC8I	GCNNGC	3 cut(s)	668, 942, 1426
BstDEI	CTNAG	5 cut(s)	867, 1260, 1348, 1681, 2199
BstDSI	CCRYGG	2 cut(s)	368, 1857
BstENI	CCTNNNNNAGG	2 cut(s)	470, 866
BstF5I	GGATG	6 cut(s)	993, 1019, 1093, 1780, 2143, 2184
BstH2I	RGCGCY	1 cut(s)	431
BstHHI	GCGC	1 cut(s)	430
BstMAI	GTCTC	2 cut(s)	1469, 1964
BstMCI	CGRYCG	1 cut(s)	827
BstMWI	GCNNNNNNNGC	5 cut(s)	16, 63, 305, 946, 2059
BstNI	CCWGG	2 cut(s)	120, 467
BstNSI	RCATGY	2 cut(s)	61, 944
BstSCI	CCNGG	3 cut(s)	118, 465, 661
BstSFI	CTRYAG	3 cut(s)	717, 1693, 2260
BstV1I	GCAGC	4 cut(s)	28, 41, 1707, 2074
BstV2I	GAAGAC	1 cut(s)	1008
BstX2I	RGATCY	2 cut(s)	634, 1873
BstXI	CCANNNNNNTGG	2 cut(s)	191, 375
BstYI	RGATCY	2 cut(s)	634, 1873
Bsu36I	CCTNAGG	1 cut(s)	867
BsuRI	GGCC	7 cut(s)	123, 666, 1193, 1327, 2018, 2116, 2168
BtgI	CCRYGG	2 cut(s)	368, 1857
BtsCI	GGATG	6 cut(s)	993, 1019, 1093, 1780, 2143, 2184
BtsI	GCAGTG	1 cut(s)	1705
BtsIMutI	CAGTG	4 cut(s)	981, 1053, 1705, 2035
BveI	ACCTGC	1 cut(s)	223
Cac8I	GCNNGC	3 cut(s)	668, 942, 1426
CciI	TCATGA	2 cut(s)	1525, 1579
CfoI	GCGC	1 cut(s)	430
Csp6I	GTAC	4 cut(s)	462, 819, 1647, 1852
CviQI	GTAC	4 cut(s)	462, 819, 1647, 1852
DdeI	CTNAG	5 cut(s)	867, 1260, 1348, 1681, 2199
DinI	GGCGCC	1 cut(s)	429
DraI	TTTAAA	3 cut(s)	622, 916, 1218
Eam1104I	CTCTTC	1 cut(s)	1056
EarI	CTCTTC	1 cut(s)	1056
Ecl136II	GAGCTC	1 cut(s)	261
Eco130I	CCWWGG	4 cut(s)	368, 1840, 1857, 2012
Eco24I	GRGCYC	1 cut(s)	263
Eco32I	GATATC	3 cut(s)	881, 1984, 2143
Eco47I	GGWCC	7 cut(s)	786, 859, 1375, 1412, 1519, 1861, 2125
Eco53kI	GAGCTC	1 cut(s)	261
Eco57I	CTGAAG	8 cut(s)	237, 393, 1020, 1473, 1650, 1863, 2011, 2095
Eco81I	CCTNAGG	1 cut(s)	867
Eco88I	CYCGRG	1 cut(s)	2151
EcoICRI	GAGCTC	1 cut(s)	261
EcoNI	CCTNNNNNAGG	2 cut(s)	470, 866
EcoO109I	RGGNCCY	3 cut(s)	859, 1519, 2016
EcoRII	CCWGG	2 cut(s)	118, 465
EcoRV	GATATC	3 cut(s)	881, 1984, 2143
EcoT14I	CCWWGG	4 cut(s)	368, 1840, 1857, 2012
EcoT22I	ATGCAT	3 cut(s)	75, 396, 942
EcoT38I	GRGCYC	1 cut(s)	263
EgeI	GGCGCC	1 cut(s)	429
EheI	GGCGCC	1 cut(s)	429
ErhI	CCWWGG	4 cut(s)	368, 1840, 1857, 2012
FaqI	GGGAC	1 cut(s)	1398
FauNDI	CATATG	1 cut(s)	2103
FbaI	TGATCA	2 cut(s)	571, 1050
FblI	GTMKAC	1 cut(s)	1764
Fnu4HI	GCNGC	4 cut(s)	17, 55, 1696, 2063
FokI	GGATG	6 cut(s)	980, 1026, 1100, 1787, 2150, 2191
FriOI	GRGCYC	1 cut(s)	263
Fsp4HI	GCNGC	4 cut(s)	17, 55, 1696, 2063
FspBI	CTAG	7 cut(s)	384, 732, 753, 816, 1136, 1332, 1460
GlaI	GCGC	1 cut(s)	429
GluI	GCNGC	4 cut(s)	17, 55, 1696, 2063
GsuI	CTGGAG	1 cut(s)	468
HaeII	RGCGCY	1 cut(s)	431
HaeIII	GGCC	7 cut(s)	123, 666, 1193, 1327, 2018, 2116, 2168
HapII	CCGG	2 cut(s)	662, 1358
HhaI	GCGC	1 cut(s)	430
Hin1I	GRCGYC	1 cut(s)	428
Hin6I	GCGC	1 cut(s)	428
HinP1I	GCGC	1 cut(s)	428
HincII	GTYRAC	1 cut(s)	646
HindII	GTYRAC	1 cut(s)	646
HindIII	AAGCTT	1 cut(s)	352
HpaI	GTTAAC	1 cut(s)	646
HpaII	CCGG	2 cut(s)	662, 1358
HphI	GGTGA	4 cut(s)	206, 498, 1070, 1934
Hpy166II	GTNNAC	4 cut(s)	646, 1375, 1765, 2085
Hpy188I	TCNGA	7 cut(s)	39, 149, 412, 1263, 1453, 1669, 1684
Hpy8I	GTNNAC	4 cut(s)	646, 1375, 1765, 2085
HpyCH4III	ACNGT	2 cut(s)	461, 2045
HpyF10VI	GCNNNNNNNGC	5 cut(s)	16, 63, 305, 946, 2059
HpyF3I	CTNAG	5 cut(s)	867, 1260, 1348, 1681, 2199
Hsp92I	GRCGYC	1 cut(s)	428
HspAI	GCGC	1 cut(s)	428
KasI	GGCGCC	1 cut(s)	427
Ksp22I	TGATCA	2 cut(s)	571, 1050
KspAI	GTTAAC	1 cut(s)	646
LmnI	GCTCC	3 cut(s)	63, 589, 2039
Lsp1109I	GCAGC	4 cut(s)	28, 41, 1707, 2074
LweI	GCATC	9 cut(s)	60, 102, 308, 388, 455, 1210, 1327, 1921, 2074
MaeI	CTAG	7 cut(s)	384, 732, 753, 816, 1136, 1332, 1460
MaeIII	GTNAC	5 cut(s)	838, 1143, 1240, 1284, 1508
MfeI	CAATTG	2 cut(s)	11, 896
MflI	RGATCY	2 cut(s)	634, 1873
MhlI	GDGCHC	1 cut(s)	263
MluCI	AATT	9 cut(s)	11, 477, 611, 623, 833, 896, 1757, 1892, 1933
Mly113I	GGCGCC	1 cut(s)	428
MlyI	GAGTC	5 cut(s)	509, 916, 1151, 1295, 1618
Mph1103I	ATGCAT	3 cut(s)	75, 396, 942
MroXI	GAANNNNTTC	1 cut(s)	807
MseI	TTAA	8 cut(s)	621, 645, 695, 915, 1217, 1223, 1362, 1431
MslI	CAYNNNNRTG	3 cut(s)	189, 373, 1530
MspA1I	CMGCKG	1 cut(s)	538
MspI	CCGG	2 cut(s)	662, 1358
MspR9I	CCNGG	3 cut(s)	120, 467, 663
MunI	CAATTG	2 cut(s)	11, 896
Mva1269I	GAATGC	1 cut(s)	1261
MvaI	CCWGG	2 cut(s)	120, 467
MwoI	GCNNNNNNNGC	5 cut(s)	16, 63, 305, 946, 2059
NarI	GGCGCC	1 cut(s)	428
NciI	CCSGG	1 cut(s)	663
NcoI	CCATGG	2 cut(s)	368, 1857
NdeI	CATATG	1 cut(s)	2103
NlaIV	GGNNCC	5 cut(s)	65, 429, 1414, 1875, 2035
NmuCI	GTSAC	4 cut(s)	838, 1143, 1284, 1508
NsiI	ATGCAT	3 cut(s)	75, 396, 942
NspI	RCATGY	2 cut(s)	61, 944
NspV	TTCGAA	2 cut(s)	422, 846
PaeI	GCATGC	1 cut(s)	944
PaeR7I	CTCGAG	1 cut(s)	2151
PagI	TCATGA	2 cut(s)	1525, 1579
PcsI	WCGNNNNNNNCGW	1 cut(s)	35
PctI	GAATGC	1 cut(s)	1261
PdmI	GAANNNNTTC	1 cut(s)	807
PfeI	GAWTC	6 cut(s)	144, 725, 848, 892, 1354, 1655
PflMI	CCANNNNNTGG	2 cut(s)	1870, 2134
PkrI	GCNGC	4 cut(s)	18, 56, 1697, 2064
PleI	GAGTC	5 cut(s)	508, 915, 1150, 1295, 1617
PluTI	GGCGCC	1 cut(s)	431
PpsI	GAGTC	5 cut(s)	508, 915, 1150, 1295, 1617
PpuMI	RGGWCCY	2 cut(s)	859, 1519
Psp124BI	GAGCTC	1 cut(s)	263
Psp5II	RGGWCCY	2 cut(s)	859, 1519
Psp6I	CCWGG	2 cut(s)	118, 465
PspGI	CCWGG	2 cut(s)	118, 465
PspN4I	GGNNCC	5 cut(s)	65, 429, 1414, 1875, 2035
PspPPI	RGGWCCY	2 cut(s)	859, 1519
PstI	CTGCAG	1 cut(s)	1697
PsuI	RGATCY	2 cut(s)	634, 1873
PvuII	CAGCTG	1 cut(s)	538
RsaI	GTAC	4 cut(s)	463, 820, 1648, 1853
RsaNI	GTAC	4 cut(s)	462, 819, 1647, 1852
RseI	CAYNNNNRTG	3 cut(s)	189, 373, 1530
SacI	GAGCTC	1 cut(s)	263
SaqAI	TTAA	8 cut(s)	621, 645, 695, 915, 1217, 1223, 1362, 1431
SatI	GCNGC	4 cut(s)	17, 55, 1696, 2063
ScaI	AGTACT	1 cut(s)	820
SchI	GAGTC	5 cut(s)	509, 916, 1151, 1295, 1618
ScrFI	CCNGG	3 cut(s)	120, 467, 663
SduI	GDGCHC	1 cut(s)	263
SfaNI	GCATC	9 cut(s)	60, 102, 308, 388, 455, 1210, 1327, 1921, 2074
SfcI	CTRYAG	3 cut(s)	717, 1693, 2260
SfoI	GGCGCC	1 cut(s)	429
Sfr274I	CTCGAG	1 cut(s)	2151
SfuI	TTCGAA	2 cut(s)	422, 846
SinI	GGWCC	7 cut(s)	786, 859, 1375, 1412, 1519, 1861, 2125
SlaI	CTCGAG	1 cut(s)	2151
SmiMI	CAYNNNNRTG	3 cut(s)	189, 373, 1530
SmlI	CTYRAG	5 cut(s)	852, 1613, 1808, 2151, 2219
SmoI	CTYRAG	5 cut(s)	852, 1613, 1808, 2151, 2219
SpeI	ACTAGT	1 cut(s)	383
SphI	GCATGC	1 cut(s)	944
Sse9I	AATT	9 cut(s)	11, 477, 611, 623, 833, 896, 1757, 1892, 1933
SsiI	CCGC	1 cut(s)	947
SspDI	GGCGCC	1 cut(s)	427
SspMI	CTAG	7 cut(s)	384, 732, 753, 816, 1136, 1332, 1460
SstI	GAGCTC	1 cut(s)	263
StyD4I	CCNGG	3 cut(s)	118, 465, 661
StyI	CCWWGG	4 cut(s)	368, 1840, 1857, 2012
TaaI	ACNGT	2 cut(s)	461, 2045
TaqI	TCGA	8 cut(s)	163, 422, 846, 1725, 1903, 1920, 2152, 2214
TaqII	GACCGA	1 cut(s)	813
TasI	AATT	9 cut(s)	11, 477, 611, 623, 833, 896, 1757, 1892, 1933
TatI	WGTACW	2 cut(s)	818, 1646
TfiI	GAWTC	6 cut(s)	144, 725, 848, 892, 1354, 1655
Tru1I	TTAA	8 cut(s)	621, 645, 695, 915, 1217, 1223, 1362, 1431
Tru9I	TTAA	8 cut(s)	621, 645, 695, 915, 1217, 1223, 1362, 1431
TscAI	CASTG	4 cut(s)	988, 1060, 1705, 2035
TseFI	GTSAC	4 cut(s)	838, 1143, 1284, 1508
TseI	GCWGC	4 cut(s)	16, 54, 1695, 2062
Tsp45I	GTSAC	4 cut(s)	838, 1143, 1284, 1508
TspRI	CASTG	4 cut(s)	988, 1060, 1705, 2035
Van91I	CCANNNNNTGG	2 cut(s)	1870, 2134
VpaK11BI	GGWCC	7 cut(s)	786, 859, 1375, 1412, 1519, 1861, 2125
XagI	CCTNNNNNAGG	2 cut(s)	470, 866
XapI	RAATTY	2 cut(s)	611, 623
XbaI	TCTAGA	2 cut(s)	731, 1135
XceI	RCATGY	2 cut(s)	61, 944
XhoI	CTCGAG	1 cut(s)	2151
XmiI	GTMKAC	1 cut(s)	1764
XmnI	GAANNNNTTC	1 cut(s)	807
XspI	CTAG	7 cut(s)	384, 732, 753, 816, 1136, 1332, 1460
ZrmI	AGTACT	1 cut(s)	820
Zsp2I	ATGCAT	3 cut(s)	75, 396, 942

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.