Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0008856

Physical Location & Seq

Genomic Coordinates Forward (+)

72184496 .. 72187401

Gene Structure 2906 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG452000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGAGAAAGCAATTGCAGCGACAGGACACGGGATTTCCGAGCAGTCATCAAGGCTGCATGTGGAGCCTGATGCATATCCTTGATTACCATCGTTGGCATAGTGTCAAGAAGATGCTTCCAGGCCGAAAGCACGGCAGAGGAAGAATCAGAGGTAGTGGAAGTCGAAAAGCAACTTTGAAAAACCACGACAATGGTGAAAAGAAAGAGTTGAGTGCTGAAGCTGAACCCTTGCAGGTCAAACAGAATGGTAAAGAAACGAGCTCTGCAAGGAAAAAGTCCAAGAAATCTCAACTAAAGGCATCAAAAGCTAAACAGGCAATTTCTCCAGAAAAAGTCATGGAGTCCTCACCAAGCAAGAAGCCAATAACAAGTAATCAGCTGAAAAAAGACATTTCCCACGACCAGTTTTATGATCATGTTGATCTTTTGGAGCTAATCAAGGCAAACAAGGAATTTTTCTTTAAATTCCTTCAAGATCCAGATGTTAACAGAAACCAGTTTCCGGGCCTGCACAAGTCCAATACCAAAGTAAGATTAACAAAATCAAGTTCATTTCCTGTAGCTGATTCGTCTAGAGCTATAAGTGTTATGCCTAGCACACTAAAACACAAGCAGAATGAAATCTGGTCCTTCCCAAAGGGAGAAAAACTTCTTGCTAGTACTCGGTCGCCAAAATTAGTGACATTCGAATCTCAAGAGGACCTCCCTGAGGGATTTAGATATCAAGGGTGGAATCAATTGGTTGTGAGTCGTTTTAAAGATATAAAGCAGAAGCTAATGCATGCACCGCAGGAGAGCAAGAAGGGAAATACTCCCACTTCCACTGAAACACTCATCCCTGAAGACCCTTCTGGATGTGATGGTAATGAAATGTATGAAACACCAGAGATGATCACTGGTGAAGAGAGAAGCAAGATTGATGGTTTGGATGATACTCTTGGAAAGCGAAAACGCCGTGTAAGTAGAACCTCCTCTCTAGATGAGTCACTCAATAGATATAGTCAGTTGTTTGAGAGTAGTTGCAGAAGTGAGGCCAAGTTGCATCACTCCATGAGTTTAAAGTTAAGAAGTGAAGAAAAAGTTACTTCAACTGGGAATGCTCAGAAATCCACCAGAAGAAATCTGTCACTACCTGACCTTGACTCTTTGTGTTCCTTTCTAAATGGGCCACCTAGAGATGCTTTTCGCTTAGGGATTCCGGTTAAAAATGTAGTGGACCACAAGACAAGTAAGGAAAATGATAGTCATATTGGTCCCAAGTCGGCGAGCCTTAATGTAGATACAGGTAAGTCTGAAGGACTAGAAGCTATTTTAGAGACAGAGTTCCAGAATGGCATAGAAGAACAAAGTGACAGAGAGGACCTTCATGAGTATGTAGTTGAGCCAGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAAGCCGAACTCATGAGCAACGAAACATTGGTTTTACGATGAGTCTTGAGGGAGAGAACGCACAACCAAGTGAAAGTTGTACTCTTGAATCTTATTCTTCAGAGTTGTCAATCTCAGAAGAACTCTGCAGCAGTGCAAAGTGTGAGCAAACTGAAATCGAACAGACAAATGTGGATCATCACGCCTCACAATTTGTAGACAAAATGGATGATCCTGAACTCAACTATGTTAGAGATGTTCTTGAGCTGTCAGGTTTCATGGGAAATGAATACCTTGGAACATGGTACTCCATGGACCAGCCTTTGGATCCTTCAGTATTCAAGGAATTGGAGGCTCGATTTCAGCATCAACTCGATTTTACTGGAAATTGGGATCACCAGCTTCTTTTTGATTTAGTGAATGAGACACTCCTTGATATCCATGAGAGATCATACACCTACTTCCCAAGGGCCTTGTCCTTCAGTGGCTCCAAACACCGTCCAATGCCGAAAGGGCAGCATCTTCTTGAAGATGTGTGGACAAGGATTAGCTCACATATGAGCTTCAGGCCAGAGCTGGTCCAGTCATTGGATGATATCTTGGCTCGAGATTTGGCGAAGGCCGATACTTGGATGAACCTTCAATGGGAAACTGAGTGTGTGGCACTCGAACTTGAGGATTTGATCTTTGAAGAACTATTAGATGAAGTTATCTGTAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378

Protein Analysis

704

Amino Acids

80.49

Weight (kDa)

5.59

Isoelectric Point (pI)

58.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3741	PF12552	120 - 161	8.3e-08	Protein of unknown function (DUF3741)
DUF4378	PF14309	544 - 700	1.5e-43	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008856)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g36010 FvH4_3g36010 FvH4_3g36010
malus_domestica	MD11G1109700.v1.1
prunus_persica	Prupe.6G078200_v2.0.a1 Prupe.6G078200_v2.0.a1
pyrus_communis	pycom03g07730 pycom11g09050
rosa_chinensis	RchiOBHm_Chr5g0064421
rosa_laevigata	RLG00000035723
rosa_multiflora	Rmu_sc0001125.1_g000006
rosa_roxburghii	Rroxscaffold_1G00016570
rosa_rugosa	Rorug05G0364600 Rorug05G0364700.1 Rorug05G0364800 Rorug05G0364800 Rorug05G0364800 Rorug05G0364900
rosa_samantha	Rh5AG423200 Rh5BG438700 Rh5CG461400 Rh5DG452000
rosa_wichuraiana	Rw5G039780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	223
AccB7I	CCANNNNNTGG	2 cut(s)	1717, 1981
AccI	GTMKAC	1 cut(s)	1611
AciI	CCGC	1 cut(s)	788
AclWI	GGATC	6 cut(s)	470, 1596, 1619, 1715, 1728, 1794
AcsI	RAATTY	2 cut(s)	452, 464
AcuI	CTGAAG	7 cut(s)	237, 861, 1314, 1497, 1710, 1858, 1942
AfaI	GTAC	3 cut(s)	661, 1495, 1700
AfiI	CCNNNNNNNGG	6 cut(s)	502, 709, 1717, 1981, 2022, 2038
AgsI	TTSAA	8 cut(s)	178, 473, 1089, 1502, 1735, 1922, 2036, 2084
AjnI	CCWGG	1 cut(s)	118
Alw21I	GWGCWC	1 cut(s)	263
Alw26I	GTCTC	2 cut(s)	1310, 1811
AlwI	GGATC	6 cut(s)	470, 1596, 1619, 1715, 1728, 1794
Ama87I	CYCGRG	1 cut(s)	1998
AoxI	GGCC	7 cut(s)	121, 505, 1032, 1166, 1863, 1961, 2013
ApeKI	GCWGC	4 cut(s)	16, 54, 1542, 1909
ApoI	RAATTY	2 cut(s)	452, 464
Asp700I	GAANNNNTTC	1 cut(s)	648
AsuC2I	CCSGG	1 cut(s)	504
AsuHPI	GGTGA	4 cut(s)	206, 339, 911, 1781
AsuII	TTCGAA	1 cut(s)	687
AvaI	CYCGRG	1 cut(s)	1998
AvaII	GGWCC	7 cut(s)	627, 700, 1216, 1253, 1360, 1708, 1972
AxyI	CCTNAGG	1 cut(s)	708
BamHI	GGATCC	1 cut(s)	1720
BanII	GRGCYC	1 cut(s)	263
BbsI	GAAGAC	1 cut(s)	849
Bbv12I	GWGCWC	1 cut(s)	263
BbvI	GCAGC	4 cut(s)	28, 41, 1554, 1921
BccI	CCATC	3 cut(s)	96, 854, 914
BceAI	ACGGC	2 cut(s)	148, 939
BciT130I	CCWGG	1 cut(s)	120
BclI	TGATCA	2 cut(s)	412, 891
BcnI	CCSGG	1 cut(s)	504
BcoDI	GTCTC	2 cut(s)	1310, 1811
BfaI	CTAG	6 cut(s)	573, 594, 657, 977, 1173, 1301
BfmI	CTRYAG	3 cut(s)	558, 1540, 2107
BfuAI	ACCTGC	1 cut(s)	223
BglI	GCCNNNNNGGC	1 cut(s)	1906
BisI	GCNGC	4 cut(s)	17, 55, 1543, 1910
BlsI	GCNGC	4 cut(s)	18, 56, 1544, 1911
BmcAI	AGTACT	1 cut(s)	661
Bme1390I	CCNGG	2 cut(s)	120, 504
Bme18I	GGWCC	7 cut(s)	627, 700, 1216, 1253, 1360, 1708, 1972
BmeT110I	CYCGRG	1 cut(s)	1998
BmiI	GGNNCC	4 cut(s)	65, 1255, 1722, 1882
BmrFI	CCNGG	2 cut(s)	120, 504
BmrI	ACTGGG	1 cut(s)	1101
BmsI	GCATC	7 cut(s)	60, 102, 308, 1051, 1168, 1768, 1921
BmuI	ACTGGG	1 cut(s)	1101
BpiI	GAAGAC	1 cut(s)	849
BpmI	CTGGAG	1 cut(s)	309
Bpu10I	CCTNAGC	1 cut(s)	1189
Bpu14I	TTCGAA	1 cut(s)	687
BpuEI	CTTGAG	4 cut(s)	678, 1481, 1676, 2087
BpuMI	CCSGG	1 cut(s)	504
BsaBI	GATNNNNATC	2 cut(s)	74, 87
BsaJI	CCNNGG	3 cut(s)	1687, 1704, 1859
BsaWI	WCCGGW	1 cut(s)	1198
Bsc4I	CCNNNNNNNGG	6 cut(s)	502, 709, 1717, 1981, 2022, 2038
Bse1I	ACTGG	6 cut(s)	403, 496, 901, 1096, 1780, 1975
Bse21I	CCTNAGG	1 cut(s)	708
Bse8I	GATNNNNATC	2 cut(s)	74, 87
BseBI	CCWGG	1 cut(s)	120
BseDI	CCNNGG	3 cut(s)	1687, 1704, 1859
BseGI	GGATG	6 cut(s)	834, 860, 934, 1627, 1990, 2031
BseJI	GATNNNNATC	2 cut(s)	74, 87
BseLI	CCNNNNNNNGG	6 cut(s)	502, 709, 1717, 1981, 2022, 2038
BseMII	CTCAG	4 cut(s)	699, 1115, 1542, 2037
BseNI	ACTGG	6 cut(s)	403, 496, 901, 1096, 1780, 1975
BseRI	GAGGAG	1 cut(s)	961
BseXI	GCAGC	4 cut(s)	28, 41, 1554, 1921
BsgI	GTGCAG	1 cut(s)	494
Bsh1285I	CGRYCG	1 cut(s)	668
BshFI	GGCC	7 cut(s)	123, 507, 1034, 1168, 1865, 1963, 2015
BsiEI	CGRYCG	1 cut(s)	668
BsiHKAI	GWGCWC	1 cut(s)	263
BsiHKCI	CYCGRG	1 cut(s)	1998
BsiSI	CCGG	2 cut(s)	503, 1199
BslFI	GGGAC	1 cut(s)	1239
BslI	CCNNNNNNNGG	6 cut(s)	502, 709, 1717, 1981, 2022, 2038
BsmAI	GTCTC	2 cut(s)	1310, 1811
BsmFI	GGGAC	1 cut(s)	1239
BsmI	GAATGC	1 cut(s)	1102
BsnI	GGCC	7 cut(s)	123, 507, 1034, 1168, 1865, 1963, 2015
BsoBI	CYCGRG	1 cut(s)	1998
Bsp119I	TTCGAA	1 cut(s)	687
Bsp1286I	GDGCHC	1 cut(s)	263
Bsp19I	CCATGG	1 cut(s)	1704
BspACI	CCGC	1 cut(s)	788
BspANI	GGCC	7 cut(s)	123, 507, 1034, 1168, 1865, 1963, 2015
BspCNI	CTCAG	4 cut(s)	700, 1114, 1541, 2038
BspHI	TCATGA	2 cut(s)	1366, 1426
BspLI	GGNNCC	4 cut(s)	65, 1255, 1722, 1882
BspMAI	CTGCAG	1 cut(s)	1544
BspMI	ACCTGC	1 cut(s)	223
BspPI	GGATC	6 cut(s)	470, 1596, 1619, 1715, 1728, 1794
BspT104I	TTCGAA	1 cut(s)	687
BsrI	ACTGG	6 cut(s)	403, 496, 901, 1096, 1780, 1975
BssECI	CCNNGG	3 cut(s)	1687, 1704, 1859
BssT1I	CCWWGG	3 cut(s)	1687, 1704, 1859
Bst2UI	CCWGG	1 cut(s)	120
Bst4CI	ACNGT	1 cut(s)	1892
Bst6I	CTCTTC	2 cut(s)	897, 1383
BstBI	TTCGAA	1 cut(s)	687
BstC8I	GCNNGC	3 cut(s)	509, 783, 1267
BstDEI	CTNAG	5 cut(s)	708, 1101, 1189, 1528, 2046
BstDSI	CCRYGG	1 cut(s)	1704
BstENI	CCTNNNNNAGG	1 cut(s)	707
BstF5I	GGATG	6 cut(s)	834, 860, 934, 1627, 1990, 2031
BstMAI	GTCTC	2 cut(s)	1310, 1811
BstMCI	CGRYCG	1 cut(s)	668
BstMWI	GCNNNNNNNGC	6 cut(s)	16, 63, 305, 314, 787, 1906
BstNI	CCWGG	1 cut(s)	120
BstNSI	RCATGY	2 cut(s)	61, 785
BstSCI	CCNGG	2 cut(s)	118, 502
BstSFI	CTRYAG	3 cut(s)	558, 1540, 2107
BstV1I	GCAGC	4 cut(s)	28, 41, 1554, 1921
BstV2I	GAAGAC	1 cut(s)	849
BstX2I	RGATCY	2 cut(s)	475, 1720
BstXI	CCANNNNNNTGG	1 cut(s)	191
BstYI	RGATCY	2 cut(s)	475, 1720
Bsu36I	CCTNAGG	1 cut(s)	708
BsuRI	GGCC	7 cut(s)	123, 507, 1034, 1168, 1865, 1963, 2015
BtgI	CCRYGG	1 cut(s)	1704
BtsCI	GGATG	6 cut(s)	834, 860, 934, 1627, 1990, 2031
BtsI	GCAGTG	1 cut(s)	1552
BtsIMutI	CAGTG	4 cut(s)	822, 894, 1552, 1882
BveI	ACCTGC	1 cut(s)	223
Cac8I	GCNNGC	3 cut(s)	509, 783, 1267
CciI	TCATGA	2 cut(s)	1366, 1426
Csp6I	GTAC	3 cut(s)	660, 1494, 1699
CviQI	GTAC	3 cut(s)	660, 1494, 1699
DdeI	CTNAG	5 cut(s)	708, 1101, 1189, 1528, 2046
DraI	TTTAAA	3 cut(s)	463, 757, 1059
Eam1104I	CTCTTC	2 cut(s)	897, 1383
EarI	CTCTTC	2 cut(s)	897, 1383
Ecl136II	GAGCTC	1 cut(s)	261
Eco130I	CCWWGG	3 cut(s)	1687, 1704, 1859
Eco24I	GRGCYC	1 cut(s)	263
Eco32I	GATATC	3 cut(s)	722, 1831, 1990
Eco47I	GGWCC	7 cut(s)	627, 700, 1216, 1253, 1360, 1708, 1972
Eco53kI	GAGCTC	1 cut(s)	261
Eco57I	CTGAAG	7 cut(s)	237, 861, 1314, 1497, 1710, 1858, 1942
Eco81I	CCTNAGG	1 cut(s)	708
Eco88I	CYCGRG	1 cut(s)	1998
EcoICRI	GAGCTC	1 cut(s)	261
EcoNI	CCTNNNNNAGG	1 cut(s)	707
EcoO109I	RGGNCCY	3 cut(s)	700, 1360, 1863
EcoRII	CCWGG	1 cut(s)	118
EcoRV	GATATC	3 cut(s)	722, 1831, 1990
EcoT14I	CCWWGG	3 cut(s)	1687, 1704, 1859
EcoT22I	ATGCAT	2 cut(s)	75, 783
EcoT38I	GRGCYC	1 cut(s)	263
ErhI	CCWWGG	3 cut(s)	1687, 1704, 1859
FaqI	GGGAC	1 cut(s)	1239
FauNDI	CATATG	1 cut(s)	1950
FbaI	TGATCA	2 cut(s)	412, 891
FblI	GTMKAC	1 cut(s)	1611
Fnu4HI	GCNGC	4 cut(s)	17, 55, 1543, 1910
FokI	GGATG	6 cut(s)	821, 867, 941, 1634, 1997, 2038
FriOI	GRGCYC	1 cut(s)	263
Fsp4HI	GCNGC	4 cut(s)	17, 55, 1543, 1910
FspBI	CTAG	6 cut(s)	573, 594, 657, 977, 1173, 1301
GluI	GCNGC	4 cut(s)	17, 55, 1543, 1910
GsuI	CTGGAG	1 cut(s)	309
HaeIII	GGCC	7 cut(s)	123, 507, 1034, 1168, 1865, 1963, 2015
HapII	CCGG	2 cut(s)	503, 1199
HincII	GTYRAC	1 cut(s)	487
HindII	GTYRAC	1 cut(s)	487
HpaI	GTTAAC	1 cut(s)	487
HpaII	CCGG	2 cut(s)	503, 1199
HphI	GGTGA	4 cut(s)	206, 339, 911, 1781
Hpy166II	GTNNAC	4 cut(s)	487, 1216, 1612, 1932
Hpy188I	TCNGA	6 cut(s)	39, 149, 1104, 1294, 1516, 1531
Hpy8I	GTNNAC	4 cut(s)	487, 1216, 1612, 1932
HpyCH4III	ACNGT	1 cut(s)	1892
HpyF10VI	GCNNNNNNNGC	6 cut(s)	16, 63, 305, 314, 787, 1906
HpyF3I	CTNAG	5 cut(s)	708, 1101, 1189, 1528, 2046
Ksp22I	TGATCA	2 cut(s)	412, 891
KspAI	GTTAAC	1 cut(s)	487
LmnI	GCTCC	3 cut(s)	63, 430, 1886
Lsp1109I	GCAGC	4 cut(s)	28, 41, 1554, 1921
LweI	GCATC	7 cut(s)	60, 102, 308, 1051, 1168, 1768, 1921
MaeI	CTAG	6 cut(s)	573, 594, 657, 977, 1173, 1301
MaeIII	GTNAC	5 cut(s)	679, 984, 1081, 1125, 1349
MfeI	CAATTG	2 cut(s)	11, 737
MflI	RGATCY	2 cut(s)	475, 1720
MhlI	GDGCHC	1 cut(s)	263
MluCI	AATT	9 cut(s)	11, 318, 452, 464, 674, 737, 1604, 1739, 1780
MlyI	GAGTC	5 cut(s)	350, 757, 992, 1136, 1465
Mph1103I	ATGCAT	2 cut(s)	75, 783
MroXI	GAANNNNTTC	1 cut(s)	648
MseI	TTAA	8 cut(s)	462, 486, 536, 756, 1058, 1064, 1203, 1272
MslI	CAYNNNNRTG	2 cut(s)	189, 1371
MspA1I	CMGCKG	1 cut(s)	379
MspI	CCGG	2 cut(s)	503, 1199
MspR9I	CCNGG	2 cut(s)	120, 504
MunI	CAATTG	2 cut(s)	11, 737
Mva1269I	GAATGC	1 cut(s)	1102
MvaI	CCWGG	1 cut(s)	120
MwoI	GCNNNNNNNGC	6 cut(s)	16, 63, 305, 314, 787, 1906
NciI	CCSGG	1 cut(s)	504
NcoI	CCATGG	1 cut(s)	1704
NdeI	CATATG	1 cut(s)	1950
NlaIV	GGNNCC	4 cut(s)	65, 1255, 1722, 1882
NmuCI	GTSAC	4 cut(s)	679, 984, 1125, 1349
NsiI	ATGCAT	2 cut(s)	75, 783
NspI	RCATGY	2 cut(s)	61, 785
NspV	TTCGAA	1 cut(s)	687
PaeI	GCATGC	1 cut(s)	785
PaeR7I	CTCGAG	1 cut(s)	1998
PagI	TCATGA	2 cut(s)	1366, 1426
PcsI	WCGNNNNNNNCGW	1 cut(s)	35
PctI	GAATGC	1 cut(s)	1102
PdmI	GAANNNNTTC	1 cut(s)	648
PfeI	GAWTC	6 cut(s)	144, 566, 689, 733, 1195, 1502
PflMI	CCANNNNNTGG	2 cut(s)	1717, 1981
PkrI	GCNGC	4 cut(s)	18, 56, 1544, 1911
PleI	GAGTC	5 cut(s)	349, 756, 991, 1136, 1464
PpsI	GAGTC	5 cut(s)	349, 756, 991, 1136, 1464
PpuMI	RGGWCCY	2 cut(s)	700, 1360
Psp124BI	GAGCTC	1 cut(s)	263
Psp5II	RGGWCCY	2 cut(s)	700, 1360
Psp6I	CCWGG	1 cut(s)	118
PspGI	CCWGG	1 cut(s)	118
PspN4I	GGNNCC	4 cut(s)	65, 1255, 1722, 1882
PspPPI	RGGWCCY	2 cut(s)	700, 1360
PstI	CTGCAG	1 cut(s)	1544
PsuI	RGATCY	2 cut(s)	475, 1720
PvuII	CAGCTG	1 cut(s)	379
RsaI	GTAC	3 cut(s)	661, 1495, 1700
RsaNI	GTAC	3 cut(s)	660, 1494, 1699
RseI	CAYNNNNRTG	2 cut(s)	189, 1371
SacI	GAGCTC	1 cut(s)	263
SaqAI	TTAA	8 cut(s)	462, 486, 536, 756, 1058, 1064, 1203, 1272
SatI	GCNGC	4 cut(s)	17, 55, 1543, 1910
ScaI	AGTACT	1 cut(s)	661
SchI	GAGTC	5 cut(s)	350, 757, 992, 1136, 1465
ScrFI	CCNGG	2 cut(s)	120, 504
SduI	GDGCHC	1 cut(s)	263
SfaNI	GCATC	7 cut(s)	60, 102, 308, 1051, 1168, 1768, 1921
SfcI	CTRYAG	3 cut(s)	558, 1540, 2107
Sfr274I	CTCGAG	1 cut(s)	1998
SfuI	TTCGAA	1 cut(s)	687
SinI	GGWCC	7 cut(s)	627, 700, 1216, 1253, 1360, 1708, 1972
SlaI	CTCGAG	1 cut(s)	1998
SmiMI	CAYNNNNRTG	2 cut(s)	189, 1371
SmlI	CTYRAG	5 cut(s)	693, 1460, 1655, 1998, 2066
SmoI	CTYRAG	5 cut(s)	693, 1460, 1655, 1998, 2066
SphI	GCATGC	1 cut(s)	785
Sse9I	AATT	9 cut(s)	11, 318, 452, 464, 674, 737, 1604, 1739, 1780
SsiI	CCGC	1 cut(s)	788
SspMI	CTAG	6 cut(s)	573, 594, 657, 977, 1173, 1301
SstI	GAGCTC	1 cut(s)	263
StyD4I	CCNGG	2 cut(s)	118, 502
StyI	CCWWGG	3 cut(s)	1687, 1704, 1859
TaaI	ACNGT	1 cut(s)	1892
TaqI	TCGA	7 cut(s)	163, 687, 1572, 1750, 1767, 1999, 2061
TaqII	GACCGA	1 cut(s)	654
TasI	AATT	9 cut(s)	11, 318, 452, 464, 674, 737, 1604, 1739, 1780
TatI	WGTACW	2 cut(s)	659, 1493
TfiI	GAWTC	6 cut(s)	144, 566, 689, 733, 1195, 1502
Tru1I	TTAA	8 cut(s)	462, 486, 536, 756, 1058, 1064, 1203, 1272
Tru9I	TTAA	8 cut(s)	462, 486, 536, 756, 1058, 1064, 1203, 1272
TscAI	CASTG	4 cut(s)	829, 901, 1552, 1882
TseFI	GTSAC	4 cut(s)	679, 984, 1125, 1349
TseI	GCWGC	4 cut(s)	16, 54, 1542, 1909
Tsp45I	GTSAC	4 cut(s)	679, 984, 1125, 1349
TspDTI	ATGAA	9 cut(s)	540, 633, 882, 891, 1355, 1660, 1695, 2042, 2112
TspRI	CASTG	4 cut(s)	829, 901, 1552, 1882
Van91I	CCANNNNNTGG	2 cut(s)	1717, 1981
VpaK11BI	GGWCC	7 cut(s)	627, 700, 1216, 1253, 1360, 1708, 1972
XagI	CCTNNNNNAGG	1 cut(s)	707
XapI	RAATTY	2 cut(s)	452, 464
XbaI	TCTAGA	2 cut(s)	572, 976
XceI	RCATGY	2 cut(s)	61, 785
XhoI	CTCGAG	1 cut(s)	1998
XmiI	GTMKAC	1 cut(s)	1611
XmnI	GAANNNNTTC	1 cut(s)	648
XspI	CTAG	6 cut(s)	573, 594, 657, 977, 1173, 1301
ZrmI	AGTACT	1 cut(s)	661
Zsp2I	ATGCAT	2 cut(s)	75, 783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.