Prupe.6G080600_v2.0.a1

Osmotin-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014568
Physical Location & Seq
Forward (+)
5478885 .. 5479883
999 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G080600.1

Sequence Viewer

Length: 753 bp
ATGGTTTCCTCTTACCACAACTCCCTCACTATCCTCCTCACCACATTCCTGATCCTCTGCTCTCTCGCCCACGCCACTTCCCCTGCACCCTTTTTGACTCTGGTCAACAACTGCCCCTTCCCCCTCTGGCCCGGCATCCAGCCCAACTCCGGCCACCCCGTCCTCGAGCGCGGCGGCTTCTACCTCCCCGCCCTCTCCCACCGCTCCTTCCCCACCCCGACCCAGCCCTGGTCTGGTCGGATCTGGGCCCGCACCCACTGCACCCAGACCCAAAACCACTTCTCCTGCCTCACCGGCGACTGCGGTGGCCGCCTCGAGTGCAACGGAGCCGGCGGGGCCGCCCCCGCCACGCTAGCGCAGGTCAGCCTCCACCACGGGCCCAACGACCTCTTCTCATACGGCGTGAGCCTCGTCGACGGCTTCAACGTCCCCTTGACCATCACCCCGCACGAGGGCCACGGAGTGTGCCCCGTGGTAGGCTGCAAGGCCGATCTGCTCGCCACGTGTCCCGAGAGGCTGAGGGTGACGTCGCACCCCGGCGTGGTGGCGTGCAAGAGCGCCTGCGAGGCGTTCCGTACGGACGAGCTGTGCTGTCGGAACCACTACAACAGCCCGCAGACGTGTCGGGCGTCGAGTTACTCGGAGTTTTTCAAGCGCGCGTGTCCTGCCACGTTTACTTTTGCTCACGACAGCCCCACGCTCATGCACCAGTGCTCGTCGCCACACGAGCTCAAGGTCATCTTTTGTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Thaumatin

Protein Analysis

251

Amino Acids

27.1

Weight (kDa)

7.56

Isoelectric Point (pI)

55.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014568)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G28790 AT2G28790
fragaria_vesca FvH4_3g35670
malus_domestica MD00G1137700.v1.1 MD02G1183000.v1.1
prunus_persica Prupe.6G080600_v2.0.a1
pyrus_communis pycom03g07950 pycom11g09260
rosa_chinensis RchiOBHm_Chr5g0063831
rosa_laevigata RLG00000035682
rosa_multiflora Rmu_co8120294.1_g000001 Rmu_sc0006498.1_g000004
rosa_roxburghii Rroxscaffold_1G00016950
rosa_rugosa Rorug05G0360700
rosa_samantha Rh5BG434900 Rh5CG458000
rosa_wichuraiana Rw5G039360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 530
Acc36I ACCTGC 1 cut(s) 349
AccBSI CCGCTC 1 cut(s) 204
AccI GTMKAC 1 cut(s) 414
AccII CGCG 3 cut(s) 171, 657, 659
AclWI GGATC 2 cut(s) 46, 248
AcoI YGGCCR 2 cut(s) 151, 307
AcvI CACGTG 1 cut(s) 504
AcyI GRCGYC 2 cut(s) 527, 629
AdeI CACNNNGTG 1 cut(s) 463
AfaI GTAC 1 cut(s) 577
AfiI CCNNNNNNNGG 7 cut(s) 149, 228, 233, 451, 452, 476, 541
AflIII ACRYGT 2 cut(s) 503, 620
AgsI TTSAA 2 cut(s) 424, 652
AjiI CACGTC 1 cut(s) 621
AjnI CCWGG 1 cut(s) 227
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AluBI AGCT 2 cut(s) 586, 730
AluI AGCT 2 cut(s) 586, 730
Alw21I GWGCWC 2 cut(s) 716, 732
AlwI GGATC 2 cut(s) 46, 248
Ama87I CYCGRG 3 cut(s) 164, 314, 509
AoxI GGCC 8 cut(s) 128, 151, 246, 307, 336, 377, 454, 486
ApaI GGGCCC 2 cut(s) 250, 381
ApeKI GCWGC 1 cut(s) 480
AspLEI GCGC 5 cut(s) 171, 358, 560, 657, 659
AspS9I GGNCC 7 cut(s) 129, 246, 247, 336, 377, 378, 454
AsuC2I CCSGG 2 cut(s) 132, 537
AsuHPI GGTGA 4 cut(s) 31, 283, 433, 535
AsuNHI GCTAGC 1 cut(s) 352
AvaI CYCGRG 3 cut(s) 164, 314, 509
BaeGI GKGCMC 3 cut(s) 250, 381, 470
BanII GRGCYC 3 cut(s) 250, 381, 732
BauI CACGAG 2 cut(s) 449, 725
BbrPI CACGTG 1 cut(s) 504
Bbv12I GWGCWC 2 cut(s) 716, 732
BbvCI CCTCAGC 1 cut(s) 518
BbvI GCAGC 1 cut(s) 467
BccI CCATC 1 cut(s) 446
BceAI ACGGC 2 cut(s) 415, 433
BcgI CGANNNNNNTGC 2 cut(s) 605, 639
BciT130I CCWGG 1 cut(s) 229
BcnI CCSGG 2 cut(s) 132, 537
BfaI CTAG 2 cut(s) 353, 751
BfoI RGCGCY 1 cut(s) 561
BfuAI ACCTGC 1 cut(s) 349
BglI GCCNNNNNGGC 3 cut(s) 294, 335, 566
BisI GCNGC 5 cut(s) 172, 175, 310, 339, 481
BlsI GCNGC 5 cut(s) 173, 176, 311, 340, 482
Bme1390I CCNGG 3 cut(s) 132, 229, 537
BmeT110I CYCGRG 3 cut(s) 164, 314, 509
BmgBI CACGTC 1 cut(s) 621
BmgT120I GGNCC 7 cut(s) 129, 246, 247, 336, 377, 378, 454
BmiI GGNNCC 5 cut(s) 248, 328, 337, 379, 599
BmrFI CCNGG 3 cut(s) 132, 229, 537
BmsI GCATC 1 cut(s) 144
BmtI GCTAGC 1 cut(s) 356
BoxI GACNNNNGTC 1 cut(s) 101
Bpu10I CCTNAGC 1 cut(s) 518
BpuEI CTTGAG 1 cut(s) 716
BpuMI CCSGG 2 cut(s) 132, 537
BsaAI YACGTR 1 cut(s) 504
BsaHI GRCGYC 2 cut(s) 527, 629
BsaJI CCNNGG 5 cut(s) 227, 373, 457, 471, 535
BsaXI ACNNNNNCTCC 4 cut(s) 5, 35, 266, 296
Bsc4I CCNNNNNNNGG 7 cut(s) 149, 228, 233, 451, 452, 476, 541
Bse118I RCCGGY 2 cut(s) 293, 329
Bse1I ACTGG 1 cut(s) 709
BseBI CCWGG 1 cut(s) 229
BseDI CCNNGG 5 cut(s) 227, 373, 457, 471, 535
BseGI GGATG 1 cut(s) 135
BseLI CCNNNNNNNGG 7 cut(s) 149, 228, 233, 451, 452, 476, 541
BseMII CTCAG 1 cut(s) 509
BseNI ACTGG 1 cut(s) 709
BsePI GCGCGC 1 cut(s) 655
BseRI GAGGAG 1 cut(s) 26
BseSI GKGCMC 3 cut(s) 250, 381, 470
BseXI GCAGC 1 cut(s) 467
BseYI CCCAGC 1 cut(s) 222
BsgI GTGCAG 2 cut(s) 69, 244
Bsh1236I CGCG 3 cut(s) 171, 657, 659
BshFI GGCC 8 cut(s) 130, 153, 248, 309, 338, 379, 456, 488
BsiHKAI GWGCWC 2 cut(s) 716, 732
BsiHKCI CYCGRG 3 cut(s) 164, 314, 509
BsiSI CCGG 5 cut(s) 132, 150, 294, 330, 537
BsiWI CGTACG 1 cut(s) 575
BslFI GGGAC 2 cut(s) 413, 492
BslI CCNNNNNNNGG 7 cut(s) 149, 228, 233, 451, 452, 476, 541
BsmFI GGGAC 2 cut(s) 413, 492
BsnI GGCC 8 cut(s) 130, 153, 248, 309, 338, 379, 456, 488
BsoBI CYCGRG 3 cut(s) 164, 314, 509
Bsp120I GGGCCC 2 cut(s) 246, 377
Bsp1286I GDGCHC 5 cut(s) 250, 381, 470, 716, 732
Bsp143I GATC 3 cut(s) 51, 240, 490
BspANI GGCC 8 cut(s) 130, 153, 248, 309, 338, 379, 456, 488
BspCNI CTCAG 1 cut(s) 510
BspFNI CGCG 3 cut(s) 171, 657, 659
BspLI GGNNCC 5 cut(s) 248, 328, 337, 379, 599
BspMI ACCTGC 1 cut(s) 349
BspOI GCTAGC 1 cut(s) 356
BspPI GGATC 2 cut(s) 46, 248
BsrBI CCGCTC 1 cut(s) 204
BsrFI RCCGGY 2 cut(s) 293, 329
BsrI ACTGG 1 cut(s) 709
BssAI RCCGGY 2 cut(s) 293, 329
BssECI CCNNGG 5 cut(s) 227, 373, 457, 471, 535
BssHII GCGCGC 1 cut(s) 655
BssMI GATC 3 cut(s) 51, 240, 490
BssNI GRCGYC 2 cut(s) 527, 629
BssSI CACGAG 2 cut(s) 449, 725
Bst2BI CACGAG 2 cut(s) 449, 725
Bst2UI CCWGG 1 cut(s) 229
Bst6I CTCTTC 1 cut(s) 395
BstACI GRCGYC 2 cut(s) 527, 629
BstAPI GCANNNNNTGC 1 cut(s) 258
BstBAI YACGTR 1 cut(s) 504
BstC8I GCNNGC 8 cut(s) 250, 331, 354, 498, 550, 562, 614, 657
BstDEI CTNAG 1 cut(s) 518
BstDSI CCRYGG 3 cut(s) 373, 457, 471
BstF5I GGATG 1 cut(s) 135
BstFNI CGCG 3 cut(s) 171, 657, 659
BstH2I RGCGCY 1 cut(s) 561
BstHHI GCGC 5 cut(s) 171, 358, 560, 657, 659
BstKTI GATC 3 cut(s) 54, 243, 493
BstMBI GATC 3 cut(s) 51, 240, 490
BstNI CCWGG 1 cut(s) 229
BstPAI GACNNNNGTC 1 cut(s) 101
BstSCI CCNGG 3 cut(s) 130, 227, 535
BstSLI GKGCMC 3 cut(s) 250, 381, 470
BstUI CGCG 3 cut(s) 171, 657, 659
BstV1I GCAGC 1 cut(s) 467
BstX2I RGATCY 1 cut(s) 240
BstYI RGATCY 1 cut(s) 240
BsuRI GGCC 8 cut(s) 130, 153, 248, 309, 338, 379, 456, 488
BtgI CCRYGG 3 cut(s) 373, 457, 471
BtrI CACGTC 1 cut(s) 621
BtsCI GGATG 1 cut(s) 135
BtsI GCAGTG 1 cut(s) 256
BtsIMutI CAGTG 2 cut(s) 256, 716
BveI ACCTGC 1 cut(s) 349
Cac8I GCNNGC 8 cut(s) 250, 331, 354, 498, 550, 562, 614, 657
CfoI GCGC 5 cut(s) 171, 358, 560, 657, 659
Cfr10I RCCGGY 2 cut(s) 293, 329
Cfr13I GGNCC 7 cut(s) 129, 246, 247, 336, 377, 378, 454
CseI GACGC 1 cut(s) 618
Csp6I GTAC 1 cut(s) 576
CviAII CATG 1 cut(s) 703
CviQI GTAC 1 cut(s) 576
DdeI CTNAG 1 cut(s) 518
DpnI GATC 3 cut(s) 53, 242, 492
DpnII GATC 3 cut(s) 51, 240, 490
DraIII CACNNNGTG 1 cut(s) 463
EaeI YGGCCR 2 cut(s) 151, 307
Eam1104I CTCTTC 1 cut(s) 395
EarI CTCTTC 1 cut(s) 395
Ecl136II GAGCTC 1 cut(s) 730
Eco24I GRGCYC 3 cut(s) 250, 381, 732
Eco53kI GAGCTC 1 cut(s) 730
Eco72I CACGTG 1 cut(s) 504
Eco88I CYCGRG 3 cut(s) 164, 314, 509
EcoICRI GAGCTC 1 cut(s) 730
EcoRII CCWGG 1 cut(s) 227
EcoT38I GRGCYC 3 cut(s) 250, 381, 732
FaeI CATG 1 cut(s) 706
FaiI YATR 2 cut(s) 397, 704
FalI AAGNNNNNCTT 1 cut(s) 725
FaqI GGGAC 2 cut(s) 413, 492
FatI CATG 1 cut(s) 702
FauI CCCGC 6 cut(s) 196, 257, 326, 352, 453, 621
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 5 cut(s) 172, 175, 310, 339, 481
FokI GGATG 1 cut(s) 122
FriOI GRGCYC 3 cut(s) 250, 381, 732
Fsp4HI GCNGC 5 cut(s) 172, 175, 310, 339, 481
FspBI CTAG 2 cut(s) 353, 751
GlaI GCGC 5 cut(s) 170, 357, 559, 656, 658
GluI GCNGC 5 cut(s) 172, 175, 310, 339, 481
GsaI CCCAGC 1 cut(s) 226
HaeII RGCGCY 1 cut(s) 561
HaeIII GGCC 8 cut(s) 130, 153, 248, 309, 338, 379, 456, 488
HapII CCGG 5 cut(s) 132, 150, 294, 330, 537
HgaI GACGC 1 cut(s) 618
HhaI GCGC 5 cut(s) 171, 358, 560, 657, 659
Hin1I GRCGYC 2 cut(s) 527, 629
Hin1II CATG 1 cut(s) 706
Hin6I GCGC 5 cut(s) 169, 356, 558, 655, 657
HinP1I GCGC 5 cut(s) 169, 356, 558, 655, 657
HincII GTYRAC 2 cut(s) 106, 415
HindII GTYRAC 2 cut(s) 106, 415
HinfI GANTC 1 cut(s) 97
HpaII CCGG 5 cut(s) 132, 150, 294, 330, 537
HphI GGTGA 4 cut(s) 31, 283, 433, 535
Hpy166II GTNNAC 3 cut(s) 106, 415, 675
Hpy188I TCNGA 3 cut(s) 240, 597, 643
Hpy188III TCNNGA 3 cut(s) 49, 509, 686
Hpy8I GTNNAC 3 cut(s) 106, 415, 675
Hpy99I CGWCG 5 cut(s) 416, 419, 532, 634, 721
HpyAV CCTTC 2 cut(s) 127, 217
HpyCH4IV ACGT 5 cut(s) 426, 503, 527, 620, 671
HpyCH4V TGCA 6 cut(s) 86, 261, 321, 483, 552, 706
HpyF3I CTNAG 1 cut(s) 518
HpySE526I ACGT 5 cut(s) 426, 503, 527, 620, 671
Hsp92I GRCGYC 2 cut(s) 527, 629
Hsp92II CATG 1 cut(s) 706
HspAI GCGC 5 cut(s) 169, 356, 558, 655, 657
KroI GCCGGC 1 cut(s) 329
KroNI GCCGGC 1 cut(s) 331
Kzo9I GATC 3 cut(s) 51, 240, 490
LmnI GCTCC 2 cut(s) 209, 326
Lsp1109I GCAGC 1 cut(s) 467
LweI GCATC 1 cut(s) 144
MaeI CTAG 2 cut(s) 353, 751
MaeII ACGT 5 cut(s) 426, 503, 527, 620, 671
MaeIII GTNAC 3 cut(s) 523, 635, 746
MalI GATC 3 cut(s) 53, 242, 492
MbiI CCGCTC 1 cut(s) 204
MboI GATC 3 cut(s) 51, 240, 490
MboII GAAGA 1 cut(s) 382
MflI RGATCY 1 cut(s) 240
MhlI GDGCHC 5 cut(s) 250, 381, 470, 716, 732
MlyI GAGTC 1 cut(s) 91
MmeI TCCRAC 2 cut(s) 218, 575
MroNI GCCGGC 1 cut(s) 329
MslI CAYNNNNRTG 1 cut(s) 701
MspI CCGG 5 cut(s) 132, 150, 294, 330, 537
MspR9I CCNGG 3 cut(s) 132, 229, 537
MvaI CCWGG 1 cut(s) 229
MvnI CGCG 3 cut(s) 171, 657, 659
NaeI GCCGGC 1 cut(s) 331
NciI CCSGG 2 cut(s) 132, 537
NdeII GATC 3 cut(s) 51, 240, 490
NgoMIV GCCGGC 1 cut(s) 329
NheI GCTAGC 1 cut(s) 352
NlaIII CATG 1 cut(s) 706
NlaIV GGNNCC 5 cut(s) 248, 328, 337, 379, 599
NmuCI GTSAC 2 cut(s) 523, 746
PaeR7I CTCGAG 2 cut(s) 164, 314
PauI GCGCGC 1 cut(s) 655
PcsI WCGNNNNNNNCGW 3 cut(s) 381, 423, 626
PdiI GCCGGC 1 cut(s) 331
Pfl23II CGTACG 1 cut(s) 575
PkrI GCNGC 5 cut(s) 173, 176, 311, 340, 482
PleI GAGTC 1 cut(s) 91
PmaCI CACGTG 1 cut(s) 504
PmlI CACGTG 1 cut(s) 504
PpsI GAGTC 1 cut(s) 91
Ppu21I YACGTR 1 cut(s) 504
PshAI GACNNNNGTC 1 cut(s) 101
Psp124BI GAGCTC 1 cut(s) 732
Psp6I CCWGG 1 cut(s) 227
PspCI CACGTG 1 cut(s) 504
PspFI CCCAGC 1 cut(s) 222
PspGI CCWGG 1 cut(s) 227
PspLI CGTACG 1 cut(s) 575
PspN4I GGNNCC 5 cut(s) 248, 328, 337, 379, 599
PspOMI GGGCCC 2 cut(s) 246, 377
PspPI GGNCC 7 cut(s) 129, 246, 247, 336, 377, 378, 454
PspXI VCTCGAGB 2 cut(s) 164, 314
PsuI RGATCY 1 cut(s) 240
PteI GCGCGC 1 cut(s) 655
RsaI GTAC 1 cut(s) 577
RsaNI GTAC 1 cut(s) 576
RseI CAYNNNNRTG 1 cut(s) 701
SacI GAGCTC 1 cut(s) 732
SalI GTCGAC 1 cut(s) 413
SatI GCNGC 5 cut(s) 172, 175, 310, 339, 481
Sau3AI GATC 3 cut(s) 51, 240, 490
Sau96I GGNCC 7 cut(s) 129, 246, 247, 336, 377, 378, 454
SchI GAGTC 1 cut(s) 91
ScrFI CCNGG 3 cut(s) 132, 229, 537
SduI GDGCHC 5 cut(s) 250, 381, 470, 716, 732
SfaNI GCATC 1 cut(s) 144
Sfr274I CTCGAG 2 cut(s) 164, 314
SgrAI CRCCGGYG 1 cut(s) 293
SgrDI CGTCGACG 1 cut(s) 413
SlaI CTCGAG 2 cut(s) 164, 314
SmiMI CAYNNNNRTG 1 cut(s) 701
SmlI CTYRAG 3 cut(s) 164, 314, 731
SmoI CTYRAG 3 cut(s) 164, 314, 731
SspMI CTAG 2 cut(s) 353, 751
SstI GAGCTC 1 cut(s) 732
StyD4I CCNGG 3 cut(s) 130, 227, 535
TaiI ACGT 5 cut(s) 429, 506, 530, 623, 674
TaqI TCGA 4 cut(s) 165, 315, 414, 632
TauI GCSGC 4 cut(s) 174, 177, 312, 341
TscAI CASTG 2 cut(s) 263, 716
TseFI GTSAC 2 cut(s) 523, 746
TseI GCWGC 1 cut(s) 480
Tsp45I GTSAC 2 cut(s) 523, 746
TspGWI ACGGA 4 cut(s) 339, 474, 563, 593
TspRI CASTG 2 cut(s) 263, 716
XcmI CCANNNNNNNNNTGG 1 cut(s) 230
XhoI CTCGAG 2 cut(s) 164, 314
XmiI GTMKAC 1 cut(s) 414
XspI CTAG 2 cut(s) 353, 751
ZraI GACGTC 1 cut(s) 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.