Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59900 |
| fragaria_vesca | FvH4_3g35360 |
| malus_domestica | MD11G1144200.v1.1 |
| prunus_persica | Prupe.6G082100_v2.0.a1 |
| pyrus_communis | pycom11g09360 |
| rosa_chinensis | RchiOBHm_Chr5g0063471 |
| rosa_laevigata | RLG00000035637 |
| rosa_multiflora | Rmu_sc0016394.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00017250 |
| rosa_rugosa | Rorug05G0357500 |
| rosa_samantha | Rh5AG416600 Rh5BG431800 Rh5CG455100 Rh5DG445300 |
| rosa_wichuraiana | Rw5G039140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1107, 1632, 1821 |
| AatII | GACGTC | 1 cut(s) | 144 |
| Acc36I | ACCTGC | 1 cut(s) | 2177 |
| AccB1I | GGYRCC | 1 cut(s) | 1087 |
| AccBSI | CCGCTC | 1 cut(s) | 2499 |
| AccI | GTMKAC | 1 cut(s) | 1926 |
| AccII | CGCG | 2 cut(s) | 755, 2338 |
| AciI | CCGC | 7 cut(s) | 265, 755, 995, 1332, 1949, 2338, 2499 |
| AclWI | GGATC | 2 cut(s) | 226, 1941 |
| AcsI | RAATTY | 3 cut(s) | 558, 853, 932 |
| AcuI | CTGAAG | 4 cut(s) | 1360, 1800, 2397, 2573 |
| AcyI | GRCGYC | 2 cut(s) | 141, 314 |
| AfaI | GTAC | 5 cut(s) | 686, 726, 901, 1719, 1953 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 415, 1290 |
| AjnI | CCWGG | 2 cut(s) | 251, 339 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 924, 956 |
| AleI | CACNNNNGTG | 1 cut(s) | 692 |
| Alw21I | GWGCWC | 1 cut(s) | 1849 |
| Alw26I | GTCTC | 2 cut(s) | 1013, 2006 |
| Alw44I | GTGCAC | 1 cut(s) | 1845 |
| AlwI | GGATC | 2 cut(s) | 226, 1941 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2029 |
| AoxI | GGCC | 4 cut(s) | 283, 362, 668, 2033 |
| ApaLI | GTGCAC | 1 cut(s) | 1845 |
| ApeKI | GCWGC | 1 cut(s) | 2317 |
| ApoI | RAATTY | 3 cut(s) | 558, 853, 932 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 104, 136, 2084, 2116 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 744 |
| AspLEI | GCGC | 1 cut(s) | 2338 |
| AspS9I | GGNCC | 1 cut(s) | 283 |
| AsuHPI | GGTGA | 7 cut(s) | 22, 616, 901, 1580, 2138, 2270, 2455 |
| BaeGI | GKGCMC | 1 cut(s) | 1849 |
| BanI | GGYRCC | 1 cut(s) | 1087 |
| BarI | GAAGNNNNNNTAC | 6 cut(s) | 1143, 1175, 1788, 1820, 2121, 2153 |
| BbsI | GAAGAC | 1 cut(s) | 656 |
| Bbv12I | GWGCWC | 1 cut(s) | 1849 |
| BbvCI | CCTCAGC | 1 cut(s) | 567 |
| BbvI | GCAGC | 1 cut(s) | 2304 |
| BccI | CCATC | 6 cut(s) | 219, 515, 1130, 1486, 1558, 1640 |
| BceAI | ACGGC | 2 cut(s) | 327, 705 |
| BciT130I | CCWGG | 2 cut(s) | 253, 341 |
| BciVI | GTATCC | 3 cut(s) | 1320, 1433, 1975 |
| BclI | TGATCA | 1 cut(s) | 1116 |
| BcoDI | GTCTC | 2 cut(s) | 1013, 2006 |
| BfaI | CTAG | 5 cut(s) | 831, 2510, 2540, 2567, 2612 |
| BfmI | CTRYAG | 2 cut(s) | 840, 1840 |
| BfuAI | ACCTGC | 1 cut(s) | 2177 |
| BfuI | GTATCC | 3 cut(s) | 1320, 1433, 1975 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1662 |
| BisI | GCNGC | 3 cut(s) | 996, 2318, 2500 |
| BlsI | GCNGC | 3 cut(s) | 997, 2319, 2501 |
| Bme1390I | CCNGG | 2 cut(s) | 253, 341 |
| BmgT120I | GGNCC | 1 cut(s) | 283 |
| BmiI | GGNNCC | 2 cut(s) | 1089, 1404 |
| BmrFI | CCNGG | 2 cut(s) | 253, 341 |
| BmsI | GCATC | 6 cut(s) | 664, 1036, 1512, 1876, 2004, 2123 |
| BpiI | GAAGAC | 1 cut(s) | 656 |
| BpmI | CTGGAG | 2 cut(s) | 1166, 2625 |
| Bpu10I | CCTNAGC | 3 cut(s) | 134, 567, 2282 |
| BsaAI | YACGTR | 1 cut(s) | 398 |
| BsaHI | GRCGYC | 2 cut(s) | 141, 314 |
| BsaI | GGTCTC | 2 cut(s) | 1013, 2006 |
| BsaJI | CCNNGG | 6 cut(s) | 251, 339, 2163, 2616, 2692, 2716 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 694, 724 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 415, 1290 |
| Bse1I | ACTGG | 3 cut(s) | 1149, 1990, 2608 |
| Bse3DI | GCAATG | 1 cut(s) | 1343 |
| BseBI | CCWGG | 2 cut(s) | 253, 341 |
| BseDI | CCNNGG | 6 cut(s) | 251, 339, 2163, 2616, 2692, 2716 |
| BseGI | GGATG | 7 cut(s) | 526, 1141, 1258, 2138, 2536, 2688, 2712 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 415, 1290 |
| BseMI | GCAATG | 1 cut(s) | 1343 |
| BseMII | CTCAG | 3 cut(s) | 558, 1013, 2021 |
| BseNI | ACTGG | 3 cut(s) | 1149, 1990, 2608 |
| BseRI | GAGGAG | 4 cut(s) | 61, 361, 1039, 1935 |
| BseSI | GKGCMC | 1 cut(s) | 1849 |
| BseXI | GCAGC | 1 cut(s) | 2304 |
| BseYI | CCCAGC | 2 cut(s) | 973, 1289 |
| BsgI | GTGCAG | 1 cut(s) | 272 |
| Bsh1236I | CGCG | 2 cut(s) | 755, 2338 |
| BshFI | GGCC | 4 cut(s) | 285, 364, 670, 2035 |
| BshNI | GGYRCC | 1 cut(s) | 1087 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1849 |
| BslFI | GGGAC | 3 cut(s) | 193, 1032, 2040 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 415, 1290 |
| BsmAI | GTCTC | 2 cut(s) | 1013, 2006 |
| BsmFI | GGGAC | 3 cut(s) | 193, 1032, 2040 |
| BsmI | GAATGC | 1 cut(s) | 589 |
| BsnI | GGCC | 4 cut(s) | 285, 364, 670, 2035 |
| Bso31I | GGTCTC | 2 cut(s) | 1013, 2006 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1849 |
| Bsp1407I | TGTACA | 3 cut(s) | 684, 724, 899 |
| Bsp143I | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| Bsp19I | CCATGG | 1 cut(s) | 2716 |
| BspACI | CCGC | 7 cut(s) | 265, 755, 995, 1332, 1949, 2338, 2499 |
| BspANI | GGCC | 4 cut(s) | 285, 364, 670, 2035 |
| BspCNI | CTCAG | 3 cut(s) | 559, 1014, 2022 |
| BspFNI | CGCG | 2 cut(s) | 755, 2338 |
| BspHI | TCATGA | 2 cut(s) | 543, 1483 |
| BspLI | GGNNCC | 2 cut(s) | 1089, 1404 |
| BspMI | ACCTGC | 1 cut(s) | 2177 |
| BspPI | GGATC | 2 cut(s) | 226, 1941 |
| BspQI | GCTCTTC | 1 cut(s) | 2234 |
| BspT107I | GGYRCC | 1 cut(s) | 1087 |
| BspTNI | GGTCTC | 2 cut(s) | 1013, 2006 |
| BsrBI | CCGCTC | 1 cut(s) | 2499 |
| BsrDI | GCAATG | 1 cut(s) | 1343 |
| BsrGI | TGTACA | 3 cut(s) | 684, 724, 899 |
| BsrI | ACTGG | 3 cut(s) | 1149, 1990, 2608 |
| BssECI | CCNNGG | 6 cut(s) | 251, 339, 2163, 2616, 2692, 2716 |
| BssMI | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| BssNI | GRCGYC | 2 cut(s) | 141, 314 |
| BssT1I | CCWWGG | 3 cut(s) | 2163, 2616, 2716 |
| Bst2UI | CCWGG | 2 cut(s) | 253, 341 |
| Bst4CI | ACNGT | 4 cut(s) | 1306, 1411, 1531, 2356 |
| Bst6I | CTCTTC | 3 cut(s) | 79, 1379, 2234 |
| BstACI | GRCGYC | 2 cut(s) | 141, 314 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1895 |
| BstAUI | TGTACA | 3 cut(s) | 684, 724, 899 |
| BstBAI | YACGTR | 1 cut(s) | 398 |
| BstC8I | GCNNGC | 4 cut(s) | 287, 366, 1334, 2334 |
| BstDEI | CTNAG | 7 cut(s) | 134, 567, 1022, 1578, 2030, 2272, 2282 |
| BstDSI | CCRYGG | 2 cut(s) | 2692, 2716 |
| BstF5I | GGATG | 7 cut(s) | 526, 1141, 1258, 2138, 2536, 2688, 2712 |
| BstFNI | CGCG | 2 cut(s) | 755, 2338 |
| BstHHI | GCGC | 1 cut(s) | 2338 |
| BstKTI | GATC | 7 cut(s) | 9, 234, 849, 1119, 1936, 2278, 2668 |
| BstMAI | GTCTC | 2 cut(s) | 1013, 2006 |
| BstMBI | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 836, 1338, 1662, 1895, 2333 |
| BstNI | CCWGG | 2 cut(s) | 253, 341 |
| BstSCI | CCNGG | 2 cut(s) | 251, 339 |
| BstSFI | CTRYAG | 2 cut(s) | 840, 1840 |
| BstSLI | GKGCMC | 1 cut(s) | 1849 |
| BstUI | CGCG | 2 cut(s) | 755, 2338 |
| BstV1I | GCAGC | 1 cut(s) | 2304 |
| BstV2I | GAAGAC | 1 cut(s) | 656 |
| BstX2I | RGATCY | 1 cut(s) | 1933 |
| BstYI | RGATCY | 1 cut(s) | 1933 |
| BsuI | GTATCC | 3 cut(s) | 1320, 1433, 1975 |
| BsuRI | GGCC | 4 cut(s) | 285, 364, 670, 2035 |
| BtgI | CCRYGG | 2 cut(s) | 2692, 2716 |
| BtsCI | GGATG | 7 cut(s) | 526, 1141, 1258, 2138, 2536, 2688, 2712 |
| BtsI | GCAGTG | 2 cut(s) | 1651, 2157 |
| BtsIMutI | CAGTG | 6 cut(s) | 1384, 1527, 1651, 2157, 2352, 2601 |
| BveI | ACCTGC | 1 cut(s) | 2177 |
| Cac8I | GCNNGC | 4 cut(s) | 287, 366, 1334, 2334 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2029 |
| CciI | TCATGA | 2 cut(s) | 543, 1483 |
| CfoI | GCGC | 1 cut(s) | 2338 |
| Cfr13I | GGNCC | 1 cut(s) | 283 |
| CseI | GACGC | 1 cut(s) | 303 |
| Csp6I | GTAC | 5 cut(s) | 685, 725, 900, 1718, 1952 |
| CviQI | GTAC | 5 cut(s) | 685, 725, 900, 1718, 1952 |
| DdeI | CTNAG | 7 cut(s) | 134, 567, 1022, 1578, 2030, 2272, 2282 |
| DpnI | GATC | 7 cut(s) | 8, 233, 848, 1118, 1935, 2277, 2667 |
| DpnII | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| DraI | TTTAAA | 1 cut(s) | 1971 |
| Eam1104I | CTCTTC | 3 cut(s) | 79, 1379, 2234 |
| EarI | CTCTTC | 3 cut(s) | 79, 1379, 2234 |
| Eco130I | CCWWGG | 3 cut(s) | 2163, 2616, 2716 |
| Eco147I | AGGCCT | 1 cut(s) | 2035 |
| Eco31I | GGTCTC | 2 cut(s) | 1013, 2006 |
| Eco57I | CTGAAG | 4 cut(s) | 1360, 1800, 2397, 2573 |
| EcoRII | CCWGG | 2 cut(s) | 251, 339 |
| EcoT14I | CCWWGG | 3 cut(s) | 2163, 2616, 2716 |
| EcoT22I | ATGCAT | 2 cut(s) | 1891, 2019 |
| ErhI | CCWWGG | 3 cut(s) | 2163, 2616, 2716 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 984, 1016, 2193, 2225 |
| FaqI | GGGAC | 3 cut(s) | 193, 1032, 2040 |
| FauI | CCCGC | 1 cut(s) | 1325 |
| FauNDI | CATATG | 1 cut(s) | 2260 |
| FbaI | TGATCA | 1 cut(s) | 1116 |
| FblI | GTMKAC | 1 cut(s) | 1926 |
| Fnu4HI | GCNGC | 3 cut(s) | 996, 2318, 2500 |
| FokI | GGATG | 7 cut(s) | 533, 1148, 1265, 2145, 2543, 2675, 2699 |
| Fsp4HI | GCNGC | 3 cut(s) | 996, 2318, 2500 |
| FspBI | CTAG | 5 cut(s) | 831, 2510, 2540, 2567, 2612 |
| GlaI | GCGC | 1 cut(s) | 2337 |
| GluI | GCNGC | 3 cut(s) | 996, 2318, 2500 |
| GsaI | CCCAGC | 2 cut(s) | 977, 1293 |
| GsuI | CTGGAG | 2 cut(s) | 1166, 2625 |
| HaeIII | GGCC | 4 cut(s) | 285, 364, 670, 2035 |
| HgaI | GACGC | 1 cut(s) | 303 |
| HhaI | GCGC | 1 cut(s) | 2338 |
| Hin1I | GRCGYC | 2 cut(s) | 141, 314 |
| Hin6I | GCGC | 1 cut(s) | 2336 |
| HinP1I | GCGC | 1 cut(s) | 2336 |
| HindIII | AAGCTT | 2 cut(s) | 295, 2409 |
| HinfI | GANTC | 8 cut(s) | 113, 247, 331, 745, 758, 802, 810, 1226 |
| HphI | GGTGA | 7 cut(s) | 22, 616, 901, 1580, 2138, 2270, 2455 |
| Hpy166II | GTNNAC | 5 cut(s) | 687, 727, 1847, 1927, 2449 |
| Hpy188I | TCNGA | 5 cut(s) | 231, 987, 1780, 2416, 2553 |
| Hpy188III | TCNNGA | 6 cut(s) | 235, 544, 850, 1484, 1904, 2405 |
| Hpy8I | GTNNAC | 5 cut(s) | 687, 727, 1847, 1927, 2449 |
| Hpy99I | CGWCG | 4 cut(s) | 143, 146, 319, 466 |
| HpyCH4III | ACNGT | 4 cut(s) | 1306, 1411, 1531, 2356 |
| HpyCH4IV | ACGT | 4 cut(s) | 141, 216, 397, 893 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 836, 1338, 1662, 1895, 2333 |
| HpyF3I | CTNAG | 7 cut(s) | 134, 567, 1022, 1578, 2030, 2272, 2282 |
| HpySE526I | ACGT | 4 cut(s) | 141, 216, 397, 893 |
| Hsp92I | GRCGYC | 2 cut(s) | 141, 314 |
| HspAI | GCGC | 1 cut(s) | 2336 |
| Ksp22I | TGATCA | 1 cut(s) | 1116 |
| Kzo9I | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| LguI | GCTCTTC | 1 cut(s) | 2234 |
| LmnI | GCTCC | 6 cut(s) | 74, 702, 949, 1408, 1964, 2496 |
| Lsp1109I | GCAGC | 1 cut(s) | 2304 |
| LweI | GCATC | 6 cut(s) | 664, 1036, 1512, 1876, 2004, 2123 |
| MaeI | CTAG | 5 cut(s) | 831, 2510, 2540, 2567, 2612 |
| MaeII | ACGT | 4 cut(s) | 141, 216, 397, 893 |
| MalI | GATC | 7 cut(s) | 8, 233, 848, 1118, 1935, 2277, 2667 |
| MbiI | CCGCTC | 1 cut(s) | 2499 |
| MboI | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| MflI | RGATCY | 1 cut(s) | 1933 |
| MhlI | GDGCHC | 1 cut(s) | 1849 |
| MlyI | GAGTC | 2 cut(s) | 107, 804 |
| MmeI | TCCRAC | 3 cut(s) | 498, 1230, 1430 |
| Mph1103I | ATGCAT | 2 cut(s) | 1891, 2019 |
| MroXI | GAANNNNTTC | 1 cut(s) | 744 |
| MseI | TTAA | 5 cut(s) | 593, 1826, 1970, 2007, 2520 |
| MslI | CAYNNNNRTG | 1 cut(s) | 692 |
| MspA1I | CMGCKG | 1 cut(s) | 2317 |
| MspR9I | CCNGG | 2 cut(s) | 253, 341 |
| Mva1269I | GAATGC | 1 cut(s) | 589 |
| MvaI | CCWGG | 2 cut(s) | 253, 341 |
| MvnI | CGCG | 2 cut(s) | 755, 2338 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 836, 1338, 1662, 1895, 2333 |
| NcoI | CCATGG | 1 cut(s) | 2716 |
| NdeI | CATATG | 1 cut(s) | 2260 |
| NdeII | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| NlaIV | GGNNCC | 2 cut(s) | 1089, 1404 |
| NmeAIII | GCCGAG | 1 cut(s) | 1682 |
| NmuCI | GTSAC | 6 cut(s) | 889, 1624, 1649, 2149, 2356, 2599 |
| NsiI | ATGCAT | 2 cut(s) | 1891, 2019 |
| OliI | CACNNNNGTG | 1 cut(s) | 692 |
| PagI | TCATGA | 2 cut(s) | 543, 1483 |
| PceI | AGGCCT | 1 cut(s) | 2035 |
| PciSI | GCTCTTC | 1 cut(s) | 2234 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 19, 108, 177 |
| PctI | GAATGC | 1 cut(s) | 589 |
| PdmI | GAANNNNTTC | 1 cut(s) | 744 |
| PfeI | GAWTC | 6 cut(s) | 247, 331, 745, 758, 802, 1226 |
| PkrI | GCNGC | 3 cut(s) | 997, 2319, 2501 |
| PleI | GAGTC | 2 cut(s) | 107, 804 |
| PpsI | GAGTC | 2 cut(s) | 107, 804 |
| Ppu21I | YACGTR | 1 cut(s) | 398 |
| PsiI | TTATAA | 3 cut(s) | 1107, 1632, 1821 |
| Psp6I | CCWGG | 2 cut(s) | 251, 339 |
| PspFI | CCCAGC | 2 cut(s) | 973, 1289 |
| PspGI | CCWGG | 2 cut(s) | 251, 339 |
| PspN4I | GGNNCC | 2 cut(s) | 1089, 1404 |
| PspPI | GGNCC | 1 cut(s) | 283 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2029 |
| PsuI | RGATCY | 1 cut(s) | 1933 |
| PvuII | CAGCTG | 1 cut(s) | 2317 |
| RsaI | GTAC | 5 cut(s) | 686, 726, 901, 1719, 1953 |
| RsaNI | GTAC | 5 cut(s) | 685, 725, 900, 1718, 1952 |
| RseI | CAYNNNNRTG | 1 cut(s) | 692 |
| SapI | GCTCTTC | 1 cut(s) | 2234 |
| SaqAI | TTAA | 5 cut(s) | 593, 1826, 1970, 2007, 2520 |
| SatI | GCNGC | 3 cut(s) | 996, 2318, 2500 |
| Sau3AI | GATC | 7 cut(s) | 6, 231, 846, 1116, 1933, 2275, 2665 |
| Sau96I | GGNCC | 1 cut(s) | 283 |
| SchI | GAGTC | 2 cut(s) | 107, 804 |
| ScrFI | CCNGG | 2 cut(s) | 253, 341 |
| SduI | GDGCHC | 1 cut(s) | 1849 |
| SfaNI | GCATC | 6 cut(s) | 664, 1036, 1512, 1876, 2004, 2123 |
| SfcI | CTRYAG | 2 cut(s) | 840, 1840 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 692 |
| SseBI | AGGCCT | 1 cut(s) | 2035 |
| SsiI | CCGC | 7 cut(s) | 265, 755, 995, 1332, 1949, 2338, 2499 |
| SspMI | CTAG | 5 cut(s) | 831, 2510, 2540, 2567, 2612 |
| StuI | AGGCCT | 1 cut(s) | 2035 |
| StyD4I | CCNGG | 2 cut(s) | 251, 339 |
| StyI | CCWWGG | 3 cut(s) | 2163, 2616, 2716 |
| TaaI | ACNGT | 4 cut(s) | 1306, 1411, 1531, 2356 |
| TaiI | ACGT | 4 cut(s) | 144, 219, 400, 896 |
| TaqI | TCGA | 4 cut(s) | 128, 148, 464, 2668 |
| TatI | WGTACW | 3 cut(s) | 684, 724, 899 |
| TauI | GCSGC | 2 cut(s) | 998, 2502 |
| TfiI | GAWTC | 6 cut(s) | 247, 331, 745, 758, 802, 1226 |
| Tru1I | TTAA | 5 cut(s) | 593, 1826, 1970, 2007, 2520 |
| Tru9I | TTAA | 5 cut(s) | 593, 1826, 1970, 2007, 2520 |
| TscAI | CASTG | 6 cut(s) | 1384, 1534, 1658, 2164, 2359, 2608 |
| TseFI | GTSAC | 6 cut(s) | 889, 1624, 1649, 2149, 2356, 2599 |
| TseI | GCWGC | 1 cut(s) | 2317 |
| Tsp45I | GTSAC | 6 cut(s) | 889, 1624, 1649, 2149, 2356, 2599 |
| TspGWI | ACGGA | 1 cut(s) | 2681 |
| TspRI | CASTG | 6 cut(s) | 1384, 1534, 1658, 2164, 2359, 2608 |
| VneI | GTGCAC | 1 cut(s) | 1845 |
| XapI | RAATTY | 3 cut(s) | 558, 853, 932 |
| XmiI | GTMKAC | 1 cut(s) | 1926 |
| XmnI | GAANNNNTTC | 1 cut(s) | 744 |
| XspI | CTAG | 5 cut(s) | 831, 2510, 2540, 2567, 2612 |
| ZraI | GACGTC | 1 cut(s) | 142 |
| Zsp2I | ATGCAT | 2 cut(s) | 1891, 2019 |