Prupe.6G115000_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
8329060 .. 8329735
676 bp
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UTR
Exon/CDS
Intron
Prupe.6G115000.1

Sequence Viewer

Length: 231 bp
ATGTCGCTCAAACTCCATTGCCACTGTCTAGCTCCCCCACCACGTCCAAATCCACTGTTCTTTCTCTTTCTCACTCTCTCTCATTCACCAAGCCCACTGCCCAAATCCTCCCTCTCACGACACTGCCGAACTCCTCCACCATGCCCAGATCCGTTATGGCCATTACCCAAATCCACCATTCTGTCTTACACTGAGTTTGAAGCGGCTTTGGAAACAGATCGGGAGGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.52

Weight (kDa)

7.73

Isoelectric Point (pI)

67.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 203
AclWI GGATC 1 cut(s) 143
AcoI YGGCCR 1 cut(s) 158
AgsI TTSAA 1 cut(s) 200
AjiI CACGTC 1 cut(s) 44
AluBI AGCT 1 cut(s) 32
AluI AGCT 1 cut(s) 32
AlwI GGATC 1 cut(s) 143
AoxI GGCC 1 cut(s) 158
AsuHPI GGTGA 1 cut(s) 78
BalI TGGCCA 1 cut(s) 160
BfaI CTAG 2 cut(s) 29, 229
BisI GCNGC 1 cut(s) 204
BlsI GCNGC 1 cut(s) 205
BmgBI CACGTC 1 cut(s) 44
Bse3DI GCAATG 1 cut(s) 16
BseMI GCAATG 1 cut(s) 16
BseMII CTCAG 1 cut(s) 183
BseRI GAGGAG 1 cut(s) 123
BshFI GGCC 1 cut(s) 160
BsnI GGCC 1 cut(s) 160
Bsp143I GATC 2 cut(s) 148, 217
BspACI CCGC 1 cut(s) 203
BspANI GGCC 1 cut(s) 160
BspCNI CTCAG 1 cut(s) 184
BspPI GGATC 1 cut(s) 143
BsrDI GCAATG 1 cut(s) 16
BssMI GATC 2 cut(s) 148, 217
Bst4CI ACNGT 2 cut(s) 26, 57
BstDEI CTNAG 1 cut(s) 192
BstKTI GATC 2 cut(s) 151, 220
BstMBI GATC 2 cut(s) 148, 217
BstX2I RGATCY 1 cut(s) 148
BstYI RGATCY 1 cut(s) 148
BsuRI GGCC 1 cut(s) 160
BtrI CACGTC 1 cut(s) 44
BtsI GCAGTG 2 cut(s) 95, 121
BtsIMutI CAGTG 5 cut(s) 22, 53, 95, 121, 189
CviAII CATG 1 cut(s) 141
CviJI RGCY 5 cut(s) 32, 93, 160, 206, 228
CviKI_1 RGCY 5 cut(s) 32, 93, 160, 206, 228
DdeI CTNAG 1 cut(s) 192
DpnI GATC 2 cut(s) 150, 219
DpnII GATC 2 cut(s) 148, 217
EaeI YGGCCR 1 cut(s) 158
FaeI CATG 1 cut(s) 144
FaiI YATR 2 cut(s) 142, 157
FatI CATG 1 cut(s) 140
Fnu4HI GCNGC 1 cut(s) 204
Fsp4HI GCNGC 1 cut(s) 204
FspBI CTAG 2 cut(s) 29, 229
GluI GCNGC 1 cut(s) 204
HaeIII GGCC 1 cut(s) 160
Hin1II CATG 1 cut(s) 144
HphI GGTGA 1 cut(s) 78
Hpy188III TCNNGA 2 cut(s) 117, 221
HpyCH4III ACNGT 2 cut(s) 26, 57
HpyCH4IV ACGT 1 cut(s) 43
HpyF3I CTNAG 1 cut(s) 192
HpySE526I ACGT 1 cut(s) 43
Hsp92II CATG 1 cut(s) 144
Kzo9I GATC 2 cut(s) 148, 217
LmnI GCTCC 1 cut(s) 37
LpnPI CCDG 1 cut(s) 159
MaeI CTAG 2 cut(s) 29, 229
MaeII ACGT 1 cut(s) 43
MalI GATC 2 cut(s) 150, 219
MboI GATC 2 cut(s) 148, 217
MflI RGATCY 1 cut(s) 148
MlsI TGGCCA 1 cut(s) 160
MluNI TGGCCA 1 cut(s) 160
MnlI CCTC 4 cut(s) 118, 122, 144, 217
Mox20I TGGCCA 1 cut(s) 160
MscI TGGCCA 1 cut(s) 160
Msp20I TGGCCA 1 cut(s) 160
NdeII GATC 2 cut(s) 148, 217
NlaIII CATG 1 cut(s) 144
PcsI WCGNNNNNNNCGW 1 cut(s) 124
PkrI GCNGC 1 cut(s) 205
PsuI RGATCY 1 cut(s) 148
SatI GCNGC 1 cut(s) 204
Sau3AI GATC 2 cut(s) 148, 217
SetI ASST 2 cut(s) 34, 46
SgeI CNNG 6 cut(s) 41, 54, 102, 129, 153, 158
SsiI CCGC 1 cut(s) 203
SspMI CTAG 2 cut(s) 29, 229
TaaI ACNGT 2 cut(s) 26, 57
TaiI ACGT 1 cut(s) 46
TauI GCSGC 1 cut(s) 206
TscAI CASTG 5 cut(s) 29, 60, 102, 128, 196
TspGWI ACGGA 1 cut(s) 141
TspRI CASTG 5 cut(s) 29, 60, 102, 128, 196
XcmI CCANNNNNNNNNTGG 1 cut(s) 153
XspI CTAG 2 cut(s) 29, 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.