Prupe.7G024300_v2.0.a1

Cysteine-rich repeat secretory protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
3827658 .. 3828005
348 bp
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UTR
Exon/CDS
Intron
Prupe.7G024300.1

Sequence Viewer

Length: 348 bp
ATGTTAATTTTTTTTGGTATAGTTGACACGAAGAACAAATTCTATTTGATAAGTTCTGAATACAATGATAATCCCCAGTTGATTAAAGATAGAGTTCATCAGTTGTTCACCCCGTTAAGTTCTATAATTGTTAATGGAGCGTTGTATGCTCAAGGGACTCGACAACTATTACACAAGACAAAACTTTTTAGTTCAGTTAAATGTACTACGGATCTTTCAGCAACAAATTGTAAGAAATGCCTTGATTATGTAATAACCGAACTTATAGATTGTAGTTATAAAATGAAATGTGGACGAGCAATGTATAGAAGTTGCTACATCAGATTTGAATTGTACAATTTTTACTAA

Protein Analysis

116

Amino Acids

13.43

Weight (kDa)

9.04

Isoelectric Point (pI)

34.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 279
AclWI GGATC 1 cut(s) 219
AcsI RAATTY 1 cut(s) 38
AfaI GTAC 2 cut(s) 205, 335
AgsI TTSAA 1 cut(s) 329
AlwI GGATC 1 cut(s) 219
ApoI RAATTY 1 cut(s) 38
Asp700I GAANNNNTTC 1 cut(s) 38
AsuHPI GGTGA 1 cut(s) 100
BmrI ACTGGG 1 cut(s) 70
BmuI ACTGGG 1 cut(s) 70
BpuEI CTTGAG 1 cut(s) 135
Bse1I ACTGG 1 cut(s) 76
Bse3DI GCAATG 1 cut(s) 306
BseMI GCAATG 1 cut(s) 306
BseNI ACTGG 1 cut(s) 76
BslFI GGGAC 1 cut(s) 169
BsmFI GGGAC 1 cut(s) 169
Bsp1407I TGTACA 1 cut(s) 333
Bsp143I GATC 1 cut(s) 211
BspPI GGATC 1 cut(s) 219
BsrDI GCAATG 1 cut(s) 306
BsrGI TGTACA 1 cut(s) 333
BsrI ACTGG 1 cut(s) 76
BssMI GATC 1 cut(s) 211
BstAUI TGTACA 1 cut(s) 333
BstKTI GATC 1 cut(s) 214
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
Csp6I GTAC 2 cut(s) 204, 334
CviQI GTAC 2 cut(s) 204, 334
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
FaiI YATR 7 cut(s) 20, 125, 147, 249, 266, 279, 306
FaqI GGGAC 1 cut(s) 169
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HinfI GANTC 1 cut(s) 157
HphI GGTGA 1 cut(s) 100
Hpy166II GTNNAC 3 cut(s) 25, 108, 293
Hpy188I TCNGA 2 cut(s) 58, 323
Hpy8I GTNNAC 3 cut(s) 25, 108, 293
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
Kzo9I GATC 1 cut(s) 211
LmnI GCTCC 1 cut(s) 137
LpnPI CCDG 1 cut(s) 89
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 1 cut(s) 43
MflI RGATCY 1 cut(s) 211
MluCI AATT 6 cut(s) 6, 38, 126, 226, 329, 337
MlyI GAGTC 1 cut(s) 151
MroXI GAANNNNTTC 1 cut(s) 38
MseI TTAA 5 cut(s) 5, 84, 116, 132, 198
MwoI GCNNNNNNNGC 1 cut(s) 146
NdeII GATC 1 cut(s) 211
PdmI GAANNNNTTC 1 cut(s) 38
PleI GAGTC 1 cut(s) 151
PpsI GAGTC 1 cut(s) 151
PsiI TTATAA 1 cut(s) 279
PsuI RGATCY 1 cut(s) 211
RsaI GTAC 2 cut(s) 205, 335
RsaNI GTAC 2 cut(s) 204, 334
SaqAI TTAA 5 cut(s) 5, 84, 116, 132, 198
Sau3AI GATC 1 cut(s) 211
SchI GAGTC 1 cut(s) 151
SgeI CNNG 8 cut(s) 40, 88, 124, 164, 171, 187, 254, 308
SmlI CTYRAG 1 cut(s) 150
SmoI CTYRAG 1 cut(s) 150
Sse9I AATT 6 cut(s) 6, 38, 126, 226, 329, 337
TaqI TCGA 1 cut(s) 160
TasI AATT 6 cut(s) 6, 38, 126, 226, 329, 337
TatI WGTACW 2 cut(s) 203, 333
Tru1I TTAA 5 cut(s) 5, 84, 116, 132, 198
Tru9I TTAA 5 cut(s) 5, 84, 116, 132, 198
TspDTI ATGAA 2 cut(s) 86, 299
TspGWI ACGGA 1 cut(s) 224
XapI RAATTY 1 cut(s) 38
XmnI GAANNNNTTC 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.