Prupe.6G135800_v2.0.a1

May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
10810801 .. 10820742
9942 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G135800.1

Sequence Viewer

Length: 1698 bp
ATGGCCCAAGCGAAGCCTGGCGGAGAGCGCCAAGTGCTGGAGTCGATGTACTCGATGATTGCTCTCGTCTTCATCCTCGTCGCCTGCGTTGAGCTATGCGACGCCGCCACAGTCGTCGACGTGTATCGGCTGATCCAGTACGACATCTCCGGTGCTCCTTTCGGATCTCGACTCGCCAACCTCAACCACCATGCTGGTTCTTTGCACTTCGCTCCTGGCTCTGATCTCTCCCGCACTGTCCTCATCATCCCCTTACGTGAACTCAACATCTCCTTCGTCAAAGAATATATTACTCAAAACCAGCCTCTGGGAGGTTTGCTGTTTTTGCTGCCCCAGATTTTTAATATAGAAAATAGAGAAAGGGCAAAAAGTAATCATCAAACTGATGGAGAGGAGCTATTGAAGAATGATCTGGCCGAACTTGAAAAATTACTTATACATTCCAAGATACCTTATCCTGTGTATTTTGCTTTTGAAGATGATGATATTGAGGCTGTGTTGGCTGACGTAAAGAGGAATGATGCCACTGGTCAACCTGCTACTGCAACTACCGGCGGATATAAGCTTGTTGTTTCAGTGCCAGAACCTAAGAAACGTGCATCACCCACCATCACAAACATTCAGGGATGGCTCTCAGGATTGAAAACTGATGGAGATGCAAATCAACTTCCAACTATTGCTATAGTAGCATCATACGACACTTTTGGGGCTGCTCCTGCTTTATCAGTTGGAAGTGATAGCAATGGAAGTGGTGTCGTGGCACTTCTTGAAATTGCTAGGTTATTTTCTGTTCTTTACTCCAATCCTAAGACAAGAGGAAGGTACAATTTACTTTTTGGGTTAACATCAGGAGGGCCTTATAATTACAATGGAACTCATAAGTGGCTTCGGAGCTTTGATCAACGCCAGCGCGAGAGTATTGACTATGCTATTTGCTTGAATAGTATTGGATCATGGGATAATGACTTGTGGATTCATGTGTCTAAGCCTCCAGAGAATGCCTACATTAAGCAAATTTTTGAAGGTTTCTCTAATGTAGCAGAAGAATTGGGCGTTAAAGTTGGTCTGAAGCACAAGAAGATAAATATTTCAAATCCCCGAGTAGCTTGGGAGCATGAACAGTTTTCACGGCTGAGAGTTACTGCTGCCACCCTTTCTGAACTCTCTGTTGCTCCTGAACTGTTAGAAAGTACTGGCAGTCTGGTTGATGGCAGACCACTCGTGAATGAAGCTGCAATCATTAAAAGTGTCAAATTAGTTGCTGAGAGCCTTGCGAGGCATATATATGGTCACGAAGGAAAGAACGTCCAAATCTTTGCAGACAACAGTAGTCTAGCAGTCAATCCTTCTTACATAAAGTCATGGTTGGATCTCTTGTCACAAACACCCCGTGTGGCGCCGTTTTTATCAAAGAATGACCCATTTATCTTGGCATTGAAGAAGGAATTGGAAGATCATACCGATGAGGTGAATGTGCAGCATGAGGTGCTTGACGGGATGTTTACTTTCTATGATTCAACTAGGGCTAGCCTTAATGTATATCAGGTTGCTAGTGTGACATTTGACTTGCTGTTGCTTCTGGTGTTGGGATCGTATTTGATAGTACTTTTCAGTTTCCTTGTCATCACAACTAGGGGTCTTGATGATCTGATCAGTTTATTTCGACGACCTCCATCACGTAAGGTGAAAACAGCCTGA

Protein Analysis

566

Amino Acids

62.43

Weight (kDa)

5.95

Isoelectric Point (pI)

37.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 861
Acc36I ACCTGC 1 cut(s) 544
AccB1I GGYRCC 1 cut(s) 1396
AccB7I CCANNNNNTGG 2 cut(s) 37, 307
AccI GTMKAC 1 cut(s) 117
AccII CGCG 1 cut(s) 912
AciI CCGC 4 cut(s) 21, 105, 232, 555
AclWI GGATC 5 cut(s) 127, 172, 958, 1377, 1597
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 1 cut(s) 1014
AcuI CTGAAG 1 cut(s) 1088
AcyI GRCGYC 2 cut(s) 102, 1397
AdeI CACNNNGTG 1 cut(s) 1391
AfaI GTAC 5 cut(s) 50, 140, 824, 1192, 1605
AfiI CCNNNNNNNGG 3 cut(s) 37, 307, 311
AflIII ACRYGT 1 cut(s) 120
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 2 cut(s) 16, 214
AjuI GAANNNNNNNTTGG 2 cut(s) 1430, 1462
AluBI AGCT 6 cut(s) 94, 397, 565, 894, 1106, 1232
AluI AGCT 6 cut(s) 94, 397, 565, 894, 1106, 1232
Alw21I GWGCWC 1 cut(s) 157
AlwI GGATC 5 cut(s) 127, 172, 958, 1377, 1597
AlwNI CAGNNNCTG 1 cut(s) 307
Ama87I CYCGRG 1 cut(s) 1098
AoxI GGCC 3 cut(s) 3, 414, 854
ApeKI GCWGC 5 cut(s) 328, 710, 1145, 1232, 1477
ApoI RAATTY 1 cut(s) 1014
AspLEI GCGC 3 cut(s) 30, 912, 1399
AspS9I GGNCC 2 cut(s) 4, 854
AsuHPI GGTGA 3 cut(s) 594, 1480, 1696
AsuNHI GCTAGC 1 cut(s) 1526
AvaI CYCGRG 1 cut(s) 1098
BanI GGYRCC 1 cut(s) 1396
BauI CACGAG 1 cut(s) 1220
BbsI GAAGAC 1 cut(s) 61
Bbv12I GWGCWC 1 cut(s) 157
BbvI GCAGC 5 cut(s) 315, 697, 1132, 1219, 1489
BccI CCATC 6 cut(s) 380, 617, 621, 644, 1202, 1681
BceAI ACGGC 2 cut(s) 1145, 1384
BcgI CGANNNNNNTGC 2 cut(s) 1201, 1235
BciT130I CCWGG 2 cut(s) 18, 216
BclI TGATCA 2 cut(s) 898, 1650
BfaI CTAG 6 cut(s) 777, 1334, 1521, 1527, 1551, 1632
BfmI CTRYAG 1 cut(s) 681
BfoI RGCGCY 2 cut(s) 31, 1400
BfuAI ACCTGC 1 cut(s) 544
BisI GCNGC 6 cut(s) 105, 329, 711, 1146, 1233, 1478
BlsI GCNGC 6 cut(s) 106, 330, 712, 1147, 1234, 1479
BmcAI AGTACT 2 cut(s) 1192, 1605
Bme1390I CCNGG 2 cut(s) 18, 216
BmeT110I CYCGRG 1 cut(s) 1098
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 2 cut(s) 4, 854
BmiI GGNNCC 1 cut(s) 1398
BmrFI CCNGG 2 cut(s) 18, 216
BmsI GCATC 4 cut(s) 511, 608, 646, 698
BmtI GCTAGC 1 cut(s) 1530
BpiI GAAGAC 1 cut(s) 61
BpmI CTGGAG 2 cut(s) 59, 975
BsaAI YACGTR 2 cut(s) 257, 1679
BsaBI GATNNNNATC 1 cut(s) 660
BsaHI GRCGYC 2 cut(s) 102, 1397
BsaWI WCCGGW 1 cut(s) 149
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 131, 161
Bsc4I CCNNNNNNNGG 3 cut(s) 37, 307, 311
Bse118I RCCGGY 1 cut(s) 551
Bse1I ACTGG 3 cut(s) 136, 532, 1198
Bse3DI GCAATG 1 cut(s) 748
Bse8I GATNNNNATC 1 cut(s) 660
BseBI CCWGG 2 cut(s) 18, 216
BseGI GGATG 4 cut(s) 72, 246, 632, 1503
BseJI GATNNNNATC 1 cut(s) 660
BseLI CCNNNNNNNGG 3 cut(s) 37, 307, 311
BseMI GCAATG 1 cut(s) 748
BseMII CTCAG 3 cut(s) 648, 1124, 1254
BseNI ACTGG 3 cut(s) 136, 532, 1198
BseRI GAGGAG 1 cut(s) 407
BseXI GCAGC 5 cut(s) 315, 697, 1132, 1219, 1489
BsgI GTGCAG 1 cut(s) 1496
Bsh1236I CGCG 1 cut(s) 912
BshFI GGCC 3 cut(s) 5, 416, 856
BshNI GGYRCC 1 cut(s) 1396
BsiHKAI GWGCWC 1 cut(s) 157
BsiHKCI CYCGRG 1 cut(s) 1098
BsiSI CCGG 2 cut(s) 150, 552
BslI CCNNNNNNNGG 3 cut(s) 37, 307, 311
BsmI GAATGC 1 cut(s) 1003
BsnI GGCC 3 cut(s) 5, 416, 856
BsoBI CYCGRG 1 cut(s) 1098
Bsp1286I GDGCHC 1 cut(s) 157
BspACI CCGC 4 cut(s) 21, 105, 232, 555
BspANI GGCC 3 cut(s) 5, 416, 856
BspCNI CTCAG 3 cut(s) 647, 1125, 1255
BspFNI CGCG 1 cut(s) 912
BspLI GGNNCC 1 cut(s) 1398
BspMI ACCTGC 1 cut(s) 544
BspOI GCTAGC 1 cut(s) 1530
BspPI GGATC 5 cut(s) 127, 172, 958, 1377, 1597
BspT107I GGYRCC 1 cut(s) 1396
BsrDI GCAATG 1 cut(s) 748
BsrFI RCCGGY 1 cut(s) 551
BsrI ACTGG 3 cut(s) 136, 532, 1198
BssAI RCCGGY 1 cut(s) 551
BssNI GRCGYC 2 cut(s) 102, 1397
BssSI CACGAG 1 cut(s) 1220
Bst2BI CACGAG 1 cut(s) 1220
Bst2UI CCWGG 2 cut(s) 18, 216
Bst4CI ACNGT 5 cut(s) 112, 238, 1122, 1182, 1328
BstACI GRCGYC 2 cut(s) 102, 1397
BstAPI GCANNNNNTGC 1 cut(s) 1486
BstBAI YACGTR 2 cut(s) 257, 1679
BstC8I GCNNGC 3 cut(s) 85, 908, 1528
BstDEI CTNAG 6 cut(s) 588, 634, 807, 984, 1133, 1263
BstENI CCTNNNNNAGG 1 cut(s) 309
BstF5I GGATG 4 cut(s) 72, 246, 632, 1503
BstFNI CGCG 1 cut(s) 912
BstH2I RGCGCY 2 cut(s) 31, 1400
BstHHI GCGC 3 cut(s) 30, 912, 1399
BstMWI GCNNNNNNNGC 7 cut(s) 27, 34, 325, 500, 686, 716, 1486
BstNI CCWGG 2 cut(s) 18, 216
BstSCI CCNGG 2 cut(s) 16, 214
BstSFI CTRYAG 1 cut(s) 681
BstUI CGCG 1 cut(s) 912
BstV1I GCAGC 5 cut(s) 315, 697, 1132, 1219, 1489
BstV2I GAAGAC 1 cut(s) 61
BstX2I RGATCY 2 cut(s) 164, 1369
BstXI CCANNNNNNTGG 1 cut(s) 194
BstYI RGATCY 2 cut(s) 164, 1369
BsuRI GGCC 3 cut(s) 5, 416, 856
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 4 cut(s) 72, 246, 632, 1503
BtsIMutI CAGTG 3 cut(s) 234, 525, 582
BveI ACCTGC 1 cut(s) 544
Cac8I GCNNGC 3 cut(s) 85, 908, 1528
CaiI CAGNNNCTG 1 cut(s) 307
CfoI GCGC 3 cut(s) 30, 912, 1399
Cfr10I RCCGGY 1 cut(s) 551
Cfr13I GGNCC 2 cut(s) 4, 854
CseI GACGC 1 cut(s) 110
Csp6I GTAC 5 cut(s) 49, 139, 823, 1191, 1604
CspCI CAANNNNNGTGG 2 cut(s) 730, 765
CviAII CATG 6 cut(s) 191, 954, 977, 1115, 1362, 1481
CviQI GTAC 5 cut(s) 49, 139, 823, 1191, 1604
DdeI CTNAG 6 cut(s) 588, 634, 807, 984, 1133, 1263
DinI GGCGCC 1 cut(s) 1398
DraIII CACNNNGTG 1 cut(s) 1391
EaeI YGGCCR 1 cut(s) 414
EciI GGCGGA 2 cut(s) 36, 570
Eco57I CTGAAG 1 cut(s) 1088
Eco88I CYCGRG 1 cut(s) 1098
EcoNI CCTNNNNNAGG 1 cut(s) 309
EcoO109I RGGNCCY 1 cut(s) 854
EcoRII CCWGG 2 cut(s) 16, 214
EgeI GGCGCC 1 cut(s) 1398
EheI GGCGCC 1 cut(s) 1398
FaeI CATG 6 cut(s) 194, 957, 980, 1118, 1365, 1484
FatI CATG 6 cut(s) 190, 953, 976, 1114, 1361, 1480
FauI CCCGC 1 cut(s) 239
FbaI TGATCA 2 cut(s) 898, 1650
FblI GTMKAC 1 cut(s) 117
Fnu4HI GCNGC 6 cut(s) 105, 329, 711, 1146, 1233, 1478
FokI GGATG 4 cut(s) 59, 233, 639, 1510
Fsp4HI GCNGC 6 cut(s) 105, 329, 711, 1146, 1233, 1478
FspBI CTAG 6 cut(s) 777, 1334, 1521, 1527, 1551, 1632
GlaI GCGC 3 cut(s) 29, 911, 1398
GluI GCNGC 6 cut(s) 105, 329, 711, 1146, 1233, 1478
GsuI CTGGAG 2 cut(s) 59, 975
HaeII RGCGCY 2 cut(s) 31, 1400
HaeIII GGCC 3 cut(s) 5, 416, 856
HapII CCGG 2 cut(s) 150, 552
HgaI GACGC 1 cut(s) 110
HhaI GCGC 3 cut(s) 30, 912, 1399
Hin1I GRCGYC 2 cut(s) 102, 1397
Hin1II CATG 6 cut(s) 194, 957, 980, 1118, 1365, 1484
Hin6I GCGC 3 cut(s) 28, 910, 1397
HinP1I GCGC 3 cut(s) 28, 910, 1397
HincII GTYRAC 3 cut(s) 118, 533, 843
HindII GTYRAC 3 cut(s) 118, 533, 843
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 4 cut(s) 41, 171, 973, 1514
HpaI GTTAAC 1 cut(s) 843
HpaII CCGG 2 cut(s) 150, 552
HphI GGTGA 3 cut(s) 594, 1480, 1696
Hpy166II GTNNAC 5 cut(s) 118, 260, 533, 843, 1503
Hpy188I TCNGA 6 cut(s) 164, 223, 891, 1068, 1159, 1650
Hpy188III TCNNGA 9 cut(s) 168, 636, 767, 849, 992, 1175, 1222, 1292, 1640
Hpy8I GTNNAC 5 cut(s) 118, 260, 533, 843, 1503
Hpy99I CGWCG 5 cut(s) 83, 104, 119, 122, 1668
HpyAV CCTTC 6 cut(s) 283, 813, 1016, 1289, 1356, 1435
HpyCH4III ACNGT 5 cut(s) 112, 238, 1122, 1182, 1328
HpyCH4IV ACGT 6 cut(s) 120, 256, 507, 595, 1305, 1678
HpyCH4V TGCA 7 cut(s) 205, 545, 599, 659, 1235, 1319, 1477
HpyF10VI GCNNNNNNNGC 7 cut(s) 27, 34, 325, 500, 686, 716, 1486
HpyF3I CTNAG 6 cut(s) 588, 634, 807, 984, 1133, 1263
HpySE526I ACGT 6 cut(s) 120, 256, 507, 595, 1305, 1678
Hsp92I GRCGYC 2 cut(s) 102, 1397
Hsp92II CATG 6 cut(s) 194, 957, 980, 1118, 1365, 1484
HspAI GCGC 3 cut(s) 28, 910, 1397
KasI GGCGCC 1 cut(s) 1396
Ksp22I TGATCA 2 cut(s) 898, 1650
KspAI GTTAAC 1 cut(s) 843
LmnI GCTCC 7 cut(s) 160, 217, 394, 718, 891, 1111, 1177
Lsp1109I GCAGC 5 cut(s) 315, 697, 1132, 1219, 1489
LweI GCATC 4 cut(s) 511, 608, 646, 698
MaeI CTAG 6 cut(s) 777, 1334, 1521, 1527, 1551, 1632
MaeII ACGT 6 cut(s) 120, 256, 507, 595, 1305, 1678
MaeIII GTNAC 4 cut(s) 1138, 1289, 1377, 1555
MboII GAAGA 7 cut(s) 61, 415, 488, 1055, 1090, 1450, 1463
MflI RGATCY 2 cut(s) 164, 1369
MhlI GDGCHC 1 cut(s) 157
MluCI AATT 8 cut(s) 428, 771, 826, 862, 1014, 1046, 1253, 1445
Mly113I GGCGCC 1 cut(s) 1397
MlyI GAGTC 2 cut(s) 50, 165
MmeI TCCRAC 3 cut(s) 695, 709, 1347
MseI TTAA 6 cut(s) 342, 842, 1008, 1056, 1242, 1533
MslI CAYNNNNRTG 2 cut(s) 1284, 1461
MspI CCGG 2 cut(s) 150, 552
MspR9I CCNGG 2 cut(s) 18, 216
Mva1269I GAATGC 1 cut(s) 1003
MvaI CCWGG 2 cut(s) 18, 216
MvnI CGCG 1 cut(s) 912
MwoI GCNNNNNNNGC 7 cut(s) 27, 34, 325, 500, 686, 716, 1486
NarI GGCGCC 1 cut(s) 1397
NheI GCTAGC 1 cut(s) 1526
NlaIII CATG 6 cut(s) 194, 957, 980, 1118, 1365, 1484
NlaIV GGNNCC 1 cut(s) 1398
NmuCI GTSAC 3 cut(s) 1289, 1377, 1555
PcsI WCGNNNNNNNCGW 2 cut(s) 50, 84
PctI GAATGC 1 cut(s) 1003
PfeI GAWTC 2 cut(s) 973, 1514
PflMI CCANNNNNTGG 2 cut(s) 37, 307
PkrI GCNGC 6 cut(s) 106, 330, 712, 1147, 1234, 1479
PleI GAGTC 2 cut(s) 49, 165
PluTI GGCGCC 1 cut(s) 1400
PpsI GAGTC 2 cut(s) 49, 165
Ppu21I YACGTR 2 cut(s) 257, 1679
PsiI TTATAA 1 cut(s) 861
Psp6I CCWGG 2 cut(s) 16, 214
PspGI CCWGG 2 cut(s) 16, 214
PspN4I GGNNCC 1 cut(s) 1398
PspPI GGNCC 2 cut(s) 4, 854
PstNI CAGNNNCTG 1 cut(s) 307
PsuI RGATCY 2 cut(s) 164, 1369
RsaI GTAC 5 cut(s) 50, 140, 824, 1192, 1605
RsaNI GTAC 5 cut(s) 49, 139, 823, 1191, 1604
RseI CAYNNNNRTG 2 cut(s) 1284, 1461
SalI GTCGAC 1 cut(s) 116
SaqAI TTAA 6 cut(s) 342, 842, 1008, 1056, 1242, 1533
SatI GCNGC 6 cut(s) 105, 329, 711, 1146, 1233, 1478
Sau96I GGNCC 2 cut(s) 4, 854
ScaI AGTACT 2 cut(s) 1192, 1605
SchI GAGTC 2 cut(s) 50, 165
ScrFI CCNGG 2 cut(s) 18, 216
SduI GDGCHC 1 cut(s) 157
SfaNI GCATC 4 cut(s) 511, 608, 646, 698
SfcI CTRYAG 1 cut(s) 681
SfoI GGCGCC 1 cut(s) 1398
SgrDI CGTCGACG 1 cut(s) 116
SmiMI CAYNNNNRTG 2 cut(s) 1284, 1461
Sse9I AATT 8 cut(s) 428, 771, 826, 862, 1014, 1046, 1253, 1445
SsiI CCGC 4 cut(s) 21, 105, 232, 555
SspDI GGCGCC 1 cut(s) 1396
SspI AATATT 1 cut(s) 1087
SspMI CTAG 6 cut(s) 777, 1334, 1521, 1527, 1551, 1632
StyD4I CCNGG 2 cut(s) 16, 214
TaaI ACNGT 5 cut(s) 112, 238, 1122, 1182, 1328
TaiI ACGT 6 cut(s) 123, 259, 510, 598, 1308, 1681
TaqI TCGA 5 cut(s) 44, 53, 117, 169, 1663
TasI AATT 8 cut(s) 428, 771, 826, 862, 1014, 1046, 1253, 1445
TatI WGTACW 3 cut(s) 48, 1190, 1603
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 2 cut(s) 973, 1514
Tru1I TTAA 6 cut(s) 342, 842, 1008, 1056, 1242, 1533
Tru9I TTAA 6 cut(s) 342, 842, 1008, 1056, 1242, 1533
TscAI CASTG 3 cut(s) 241, 532, 582
TseFI GTSAC 3 cut(s) 1289, 1377, 1555
TseI GCWGC 5 cut(s) 328, 710, 1145, 1232, 1477
Tsp45I GTSAC 3 cut(s) 1289, 1377, 1555
TspDTI ATGAA 4 cut(s) 61, 965, 1131, 1242
TspRI CASTG 3 cut(s) 241, 532, 582
Van91I CCANNNNNTGG 2 cut(s) 37, 307
XagI CCTNNNNNAGG 1 cut(s) 309
XapI RAATTY 1 cut(s) 1014
XcmI CCANNNNNNNNNTGG 1 cut(s) 14
XmiI GTMKAC 1 cut(s) 117
XspI CTAG 6 cut(s) 777, 1334, 1521, 1527, 1551, 1632
ZrmI AGTACT 2 cut(s) 1192, 1605
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.