May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44330 |
| fragaria_vesca | FvH4_3g25670 FvH4_3g25670 FvH4_3g25670 FvH4_3g25670 |
| malus_domestica | MD03G1149800.v1.1 MD11G1168600.v1.1 |
| prunus_persica | Prupe.6G135800_v2.0.a1 |
| pyrus_communis | pycom11g14130 |
| rosa_chinensis | RchiOBHm_Chr5g0045881 |
| rosa_laevigata | RLG00000034394 |
| rosa_multiflora | Rmu_sc0001212.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00028740 Rroxscaffold_1G00035230 Rroxscaffold_2G00117520 Rroxscaffold_2G00117530 |
| rosa_rugosa | Rorug05G0226200 Rorug05G0226300 |
| rosa_samantha | Rh5AG307700 Rh5BG316000 Rh5CG342200 Rh5DG326300 |
| rosa_wichuraiana | Rw5G028810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 861 |
| Acc36I | ACCTGC | 1 cut(s) | 544 |
| AccB1I | GGYRCC | 1 cut(s) | 1396 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 37, 307 |
| AccI | GTMKAC | 1 cut(s) | 117 |
| AccII | CGCG | 1 cut(s) | 912 |
| AciI | CCGC | 4 cut(s) | 21, 105, 232, 555 |
| AclWI | GGATC | 5 cut(s) | 127, 172, 958, 1377, 1597 |
| AcoI | YGGCCR | 1 cut(s) | 414 |
| AcsI | RAATTY | 1 cut(s) | 1014 |
| AcuI | CTGAAG | 1 cut(s) | 1088 |
| AcyI | GRCGYC | 2 cut(s) | 102, 1397 |
| AdeI | CACNNNGTG | 1 cut(s) | 1391 |
| AfaI | GTAC | 5 cut(s) | 50, 140, 824, 1192, 1605 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 37, 307, 311 |
| AflIII | ACRYGT | 1 cut(s) | 120 |
| AjiI | CACGTC | 1 cut(s) | 121 |
| AjnI | CCWGG | 2 cut(s) | 16, 214 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1430, 1462 |
| AluBI | AGCT | 6 cut(s) | 94, 397, 565, 894, 1106, 1232 |
| AluI | AGCT | 6 cut(s) | 94, 397, 565, 894, 1106, 1232 |
| Alw21I | GWGCWC | 1 cut(s) | 157 |
| AlwI | GGATC | 5 cut(s) | 127, 172, 958, 1377, 1597 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 307 |
| Ama87I | CYCGRG | 1 cut(s) | 1098 |
| AoxI | GGCC | 3 cut(s) | 3, 414, 854 |
| ApeKI | GCWGC | 5 cut(s) | 328, 710, 1145, 1232, 1477 |
| ApoI | RAATTY | 1 cut(s) | 1014 |
| AspLEI | GCGC | 3 cut(s) | 30, 912, 1399 |
| AspS9I | GGNCC | 2 cut(s) | 4, 854 |
| AsuHPI | GGTGA | 3 cut(s) | 594, 1480, 1696 |
| AsuNHI | GCTAGC | 1 cut(s) | 1526 |
| AvaI | CYCGRG | 1 cut(s) | 1098 |
| BanI | GGYRCC | 1 cut(s) | 1396 |
| BauI | CACGAG | 1 cut(s) | 1220 |
| BbsI | GAAGAC | 1 cut(s) | 61 |
| Bbv12I | GWGCWC | 1 cut(s) | 157 |
| BbvI | GCAGC | 5 cut(s) | 315, 697, 1132, 1219, 1489 |
| BccI | CCATC | 6 cut(s) | 380, 617, 621, 644, 1202, 1681 |
| BceAI | ACGGC | 2 cut(s) | 1145, 1384 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1201, 1235 |
| BciT130I | CCWGG | 2 cut(s) | 18, 216 |
| BclI | TGATCA | 2 cut(s) | 898, 1650 |
| BfaI | CTAG | 6 cut(s) | 777, 1334, 1521, 1527, 1551, 1632 |
| BfmI | CTRYAG | 1 cut(s) | 681 |
| BfoI | RGCGCY | 2 cut(s) | 31, 1400 |
| BfuAI | ACCTGC | 1 cut(s) | 544 |
| BisI | GCNGC | 6 cut(s) | 105, 329, 711, 1146, 1233, 1478 |
| BlsI | GCNGC | 6 cut(s) | 106, 330, 712, 1147, 1234, 1479 |
| BmcAI | AGTACT | 2 cut(s) | 1192, 1605 |
| Bme1390I | CCNGG | 2 cut(s) | 18, 216 |
| BmeT110I | CYCGRG | 1 cut(s) | 1098 |
| BmgBI | CACGTC | 1 cut(s) | 121 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 854 |
| BmiI | GGNNCC | 1 cut(s) | 1398 |
| BmrFI | CCNGG | 2 cut(s) | 18, 216 |
| BmsI | GCATC | 4 cut(s) | 511, 608, 646, 698 |
| BmtI | GCTAGC | 1 cut(s) | 1530 |
| BpiI | GAAGAC | 1 cut(s) | 61 |
| BpmI | CTGGAG | 2 cut(s) | 59, 975 |
| BsaAI | YACGTR | 2 cut(s) | 257, 1679 |
| BsaBI | GATNNNNATC | 1 cut(s) | 660 |
| BsaHI | GRCGYC | 2 cut(s) | 102, 1397 |
| BsaWI | WCCGGW | 1 cut(s) | 149 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 32, 62, 131, 161 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 37, 307, 311 |
| Bse118I | RCCGGY | 1 cut(s) | 551 |
| Bse1I | ACTGG | 3 cut(s) | 136, 532, 1198 |
| Bse3DI | GCAATG | 1 cut(s) | 748 |
| Bse8I | GATNNNNATC | 1 cut(s) | 660 |
| BseBI | CCWGG | 2 cut(s) | 18, 216 |
| BseGI | GGATG | 4 cut(s) | 72, 246, 632, 1503 |
| BseJI | GATNNNNATC | 1 cut(s) | 660 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 37, 307, 311 |
| BseMI | GCAATG | 1 cut(s) | 748 |
| BseMII | CTCAG | 3 cut(s) | 648, 1124, 1254 |
| BseNI | ACTGG | 3 cut(s) | 136, 532, 1198 |
| BseRI | GAGGAG | 1 cut(s) | 407 |
| BseXI | GCAGC | 5 cut(s) | 315, 697, 1132, 1219, 1489 |
| BsgI | GTGCAG | 1 cut(s) | 1496 |
| Bsh1236I | CGCG | 1 cut(s) | 912 |
| BshFI | GGCC | 3 cut(s) | 5, 416, 856 |
| BshNI | GGYRCC | 1 cut(s) | 1396 |
| BsiHKAI | GWGCWC | 1 cut(s) | 157 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1098 |
| BsiSI | CCGG | 2 cut(s) | 150, 552 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 37, 307, 311 |
| BsmI | GAATGC | 1 cut(s) | 1003 |
| BsnI | GGCC | 3 cut(s) | 5, 416, 856 |
| BsoBI | CYCGRG | 1 cut(s) | 1098 |
| Bsp1286I | GDGCHC | 1 cut(s) | 157 |
| BspACI | CCGC | 4 cut(s) | 21, 105, 232, 555 |
| BspANI | GGCC | 3 cut(s) | 5, 416, 856 |
| BspCNI | CTCAG | 3 cut(s) | 647, 1125, 1255 |
| BspFNI | CGCG | 1 cut(s) | 912 |
| BspLI | GGNNCC | 1 cut(s) | 1398 |
| BspMI | ACCTGC | 1 cut(s) | 544 |
| BspOI | GCTAGC | 1 cut(s) | 1530 |
| BspPI | GGATC | 5 cut(s) | 127, 172, 958, 1377, 1597 |
| BspT107I | GGYRCC | 1 cut(s) | 1396 |
| BsrDI | GCAATG | 1 cut(s) | 748 |
| BsrFI | RCCGGY | 1 cut(s) | 551 |
| BsrI | ACTGG | 3 cut(s) | 136, 532, 1198 |
| BssAI | RCCGGY | 1 cut(s) | 551 |
| BssNI | GRCGYC | 2 cut(s) | 102, 1397 |
| BssSI | CACGAG | 1 cut(s) | 1220 |
| Bst2BI | CACGAG | 1 cut(s) | 1220 |
| Bst2UI | CCWGG | 2 cut(s) | 18, 216 |
| Bst4CI | ACNGT | 5 cut(s) | 112, 238, 1122, 1182, 1328 |
| BstACI | GRCGYC | 2 cut(s) | 102, 1397 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1486 |
| BstBAI | YACGTR | 2 cut(s) | 257, 1679 |
| BstC8I | GCNNGC | 3 cut(s) | 85, 908, 1528 |
| BstDEI | CTNAG | 6 cut(s) | 588, 634, 807, 984, 1133, 1263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 309 |
| BstF5I | GGATG | 4 cut(s) | 72, 246, 632, 1503 |
| BstFNI | CGCG | 1 cut(s) | 912 |
| BstH2I | RGCGCY | 2 cut(s) | 31, 1400 |
| BstHHI | GCGC | 3 cut(s) | 30, 912, 1399 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 27, 34, 325, 500, 686, 716, 1486 |
| BstNI | CCWGG | 2 cut(s) | 18, 216 |
| BstSCI | CCNGG | 2 cut(s) | 16, 214 |
| BstSFI | CTRYAG | 1 cut(s) | 681 |
| BstUI | CGCG | 1 cut(s) | 912 |
| BstV1I | GCAGC | 5 cut(s) | 315, 697, 1132, 1219, 1489 |
| BstV2I | GAAGAC | 1 cut(s) | 61 |
| BstX2I | RGATCY | 2 cut(s) | 164, 1369 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 194 |
| BstYI | RGATCY | 2 cut(s) | 164, 1369 |
| BsuRI | GGCC | 3 cut(s) | 5, 416, 856 |
| BtrI | CACGTC | 1 cut(s) | 121 |
| BtsCI | GGATG | 4 cut(s) | 72, 246, 632, 1503 |
| BtsIMutI | CAGTG | 3 cut(s) | 234, 525, 582 |
| BveI | ACCTGC | 1 cut(s) | 544 |
| Cac8I | GCNNGC | 3 cut(s) | 85, 908, 1528 |
| CaiI | CAGNNNCTG | 1 cut(s) | 307 |
| CfoI | GCGC | 3 cut(s) | 30, 912, 1399 |
| Cfr10I | RCCGGY | 1 cut(s) | 551 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 854 |
| CseI | GACGC | 1 cut(s) | 110 |
| Csp6I | GTAC | 5 cut(s) | 49, 139, 823, 1191, 1604 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 730, 765 |
| CviAII | CATG | 6 cut(s) | 191, 954, 977, 1115, 1362, 1481 |
| CviQI | GTAC | 5 cut(s) | 49, 139, 823, 1191, 1604 |
| DdeI | CTNAG | 6 cut(s) | 588, 634, 807, 984, 1133, 1263 |
| DinI | GGCGCC | 1 cut(s) | 1398 |
| DraIII | CACNNNGTG | 1 cut(s) | 1391 |
| EaeI | YGGCCR | 1 cut(s) | 414 |
| EciI | GGCGGA | 2 cut(s) | 36, 570 |
| Eco57I | CTGAAG | 1 cut(s) | 1088 |
| Eco88I | CYCGRG | 1 cut(s) | 1098 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 309 |
| EcoO109I | RGGNCCY | 1 cut(s) | 854 |
| EcoRII | CCWGG | 2 cut(s) | 16, 214 |
| EgeI | GGCGCC | 1 cut(s) | 1398 |
| EheI | GGCGCC | 1 cut(s) | 1398 |
| FaeI | CATG | 6 cut(s) | 194, 957, 980, 1118, 1365, 1484 |
| FatI | CATG | 6 cut(s) | 190, 953, 976, 1114, 1361, 1480 |
| FauI | CCCGC | 1 cut(s) | 239 |
| FbaI | TGATCA | 2 cut(s) | 898, 1650 |
| FblI | GTMKAC | 1 cut(s) | 117 |
| Fnu4HI | GCNGC | 6 cut(s) | 105, 329, 711, 1146, 1233, 1478 |
| FokI | GGATG | 4 cut(s) | 59, 233, 639, 1510 |
| Fsp4HI | GCNGC | 6 cut(s) | 105, 329, 711, 1146, 1233, 1478 |
| FspBI | CTAG | 6 cut(s) | 777, 1334, 1521, 1527, 1551, 1632 |
| GlaI | GCGC | 3 cut(s) | 29, 911, 1398 |
| GluI | GCNGC | 6 cut(s) | 105, 329, 711, 1146, 1233, 1478 |
| GsuI | CTGGAG | 2 cut(s) | 59, 975 |
| HaeII | RGCGCY | 2 cut(s) | 31, 1400 |
| HaeIII | GGCC | 3 cut(s) | 5, 416, 856 |
| HapII | CCGG | 2 cut(s) | 150, 552 |
| HgaI | GACGC | 1 cut(s) | 110 |
| HhaI | GCGC | 3 cut(s) | 30, 912, 1399 |
| Hin1I | GRCGYC | 2 cut(s) | 102, 1397 |
| Hin1II | CATG | 6 cut(s) | 194, 957, 980, 1118, 1365, 1484 |
| Hin6I | GCGC | 3 cut(s) | 28, 910, 1397 |
| HinP1I | GCGC | 3 cut(s) | 28, 910, 1397 |
| HincII | GTYRAC | 3 cut(s) | 118, 533, 843 |
| HindII | GTYRAC | 3 cut(s) | 118, 533, 843 |
| HindIII | AAGCTT | 1 cut(s) | 563 |
| HinfI | GANTC | 4 cut(s) | 41, 171, 973, 1514 |
| HpaI | GTTAAC | 1 cut(s) | 843 |
| HpaII | CCGG | 2 cut(s) | 150, 552 |
| HphI | GGTGA | 3 cut(s) | 594, 1480, 1696 |
| Hpy166II | GTNNAC | 5 cut(s) | 118, 260, 533, 843, 1503 |
| Hpy188I | TCNGA | 6 cut(s) | 164, 223, 891, 1068, 1159, 1650 |
| Hpy188III | TCNNGA | 9 cut(s) | 168, 636, 767, 849, 992, 1175, 1222, 1292, 1640 |
| Hpy8I | GTNNAC | 5 cut(s) | 118, 260, 533, 843, 1503 |
| Hpy99I | CGWCG | 5 cut(s) | 83, 104, 119, 122, 1668 |
| HpyAV | CCTTC | 6 cut(s) | 283, 813, 1016, 1289, 1356, 1435 |
| HpyCH4III | ACNGT | 5 cut(s) | 112, 238, 1122, 1182, 1328 |
| HpyCH4IV | ACGT | 6 cut(s) | 120, 256, 507, 595, 1305, 1678 |
| HpyCH4V | TGCA | 7 cut(s) | 205, 545, 599, 659, 1235, 1319, 1477 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 27, 34, 325, 500, 686, 716, 1486 |
| HpyF3I | CTNAG | 6 cut(s) | 588, 634, 807, 984, 1133, 1263 |
| HpySE526I | ACGT | 6 cut(s) | 120, 256, 507, 595, 1305, 1678 |
| Hsp92I | GRCGYC | 2 cut(s) | 102, 1397 |
| Hsp92II | CATG | 6 cut(s) | 194, 957, 980, 1118, 1365, 1484 |
| HspAI | GCGC | 3 cut(s) | 28, 910, 1397 |
| KasI | GGCGCC | 1 cut(s) | 1396 |
| Ksp22I | TGATCA | 2 cut(s) | 898, 1650 |
| KspAI | GTTAAC | 1 cut(s) | 843 |
| LmnI | GCTCC | 7 cut(s) | 160, 217, 394, 718, 891, 1111, 1177 |
| Lsp1109I | GCAGC | 5 cut(s) | 315, 697, 1132, 1219, 1489 |
| LweI | GCATC | 4 cut(s) | 511, 608, 646, 698 |
| MaeI | CTAG | 6 cut(s) | 777, 1334, 1521, 1527, 1551, 1632 |
| MaeII | ACGT | 6 cut(s) | 120, 256, 507, 595, 1305, 1678 |
| MaeIII | GTNAC | 4 cut(s) | 1138, 1289, 1377, 1555 |
| MboII | GAAGA | 7 cut(s) | 61, 415, 488, 1055, 1090, 1450, 1463 |
| MflI | RGATCY | 2 cut(s) | 164, 1369 |
| MhlI | GDGCHC | 1 cut(s) | 157 |
| MluCI | AATT | 8 cut(s) | 428, 771, 826, 862, 1014, 1046, 1253, 1445 |
| Mly113I | GGCGCC | 1 cut(s) | 1397 |
| MlyI | GAGTC | 2 cut(s) | 50, 165 |
| MmeI | TCCRAC | 3 cut(s) | 695, 709, 1347 |
| MseI | TTAA | 6 cut(s) | 342, 842, 1008, 1056, 1242, 1533 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1284, 1461 |
| MspI | CCGG | 2 cut(s) | 150, 552 |
| MspR9I | CCNGG | 2 cut(s) | 18, 216 |
| Mva1269I | GAATGC | 1 cut(s) | 1003 |
| MvaI | CCWGG | 2 cut(s) | 18, 216 |
| MvnI | CGCG | 1 cut(s) | 912 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 27, 34, 325, 500, 686, 716, 1486 |
| NarI | GGCGCC | 1 cut(s) | 1397 |
| NheI | GCTAGC | 1 cut(s) | 1526 |
| NlaIII | CATG | 6 cut(s) | 194, 957, 980, 1118, 1365, 1484 |
| NlaIV | GGNNCC | 1 cut(s) | 1398 |
| NmuCI | GTSAC | 3 cut(s) | 1289, 1377, 1555 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 50, 84 |
| PctI | GAATGC | 1 cut(s) | 1003 |
| PfeI | GAWTC | 2 cut(s) | 973, 1514 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 37, 307 |
| PkrI | GCNGC | 6 cut(s) | 106, 330, 712, 1147, 1234, 1479 |
| PleI | GAGTC | 2 cut(s) | 49, 165 |
| PluTI | GGCGCC | 1 cut(s) | 1400 |
| PpsI | GAGTC | 2 cut(s) | 49, 165 |
| Ppu21I | YACGTR | 2 cut(s) | 257, 1679 |
| PsiI | TTATAA | 1 cut(s) | 861 |
| Psp6I | CCWGG | 2 cut(s) | 16, 214 |
| PspGI | CCWGG | 2 cut(s) | 16, 214 |
| PspN4I | GGNNCC | 1 cut(s) | 1398 |
| PspPI | GGNCC | 2 cut(s) | 4, 854 |
| PstNI | CAGNNNCTG | 1 cut(s) | 307 |
| PsuI | RGATCY | 2 cut(s) | 164, 1369 |
| RsaI | GTAC | 5 cut(s) | 50, 140, 824, 1192, 1605 |
| RsaNI | GTAC | 5 cut(s) | 49, 139, 823, 1191, 1604 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1284, 1461 |
| SalI | GTCGAC | 1 cut(s) | 116 |
| SaqAI | TTAA | 6 cut(s) | 342, 842, 1008, 1056, 1242, 1533 |
| SatI | GCNGC | 6 cut(s) | 105, 329, 711, 1146, 1233, 1478 |
| Sau96I | GGNCC | 2 cut(s) | 4, 854 |
| ScaI | AGTACT | 2 cut(s) | 1192, 1605 |
| SchI | GAGTC | 2 cut(s) | 50, 165 |
| ScrFI | CCNGG | 2 cut(s) | 18, 216 |
| SduI | GDGCHC | 1 cut(s) | 157 |
| SfaNI | GCATC | 4 cut(s) | 511, 608, 646, 698 |
| SfcI | CTRYAG | 1 cut(s) | 681 |
| SfoI | GGCGCC | 1 cut(s) | 1398 |
| SgrDI | CGTCGACG | 1 cut(s) | 116 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1284, 1461 |
| Sse9I | AATT | 8 cut(s) | 428, 771, 826, 862, 1014, 1046, 1253, 1445 |
| SsiI | CCGC | 4 cut(s) | 21, 105, 232, 555 |
| SspDI | GGCGCC | 1 cut(s) | 1396 |
| SspI | AATATT | 1 cut(s) | 1087 |
| SspMI | CTAG | 6 cut(s) | 777, 1334, 1521, 1527, 1551, 1632 |
| StyD4I | CCNGG | 2 cut(s) | 16, 214 |
| TaaI | ACNGT | 5 cut(s) | 112, 238, 1122, 1182, 1328 |
| TaiI | ACGT | 6 cut(s) | 123, 259, 510, 598, 1308, 1681 |
| TaqI | TCGA | 5 cut(s) | 44, 53, 117, 169, 1663 |
| TasI | AATT | 8 cut(s) | 428, 771, 826, 862, 1014, 1046, 1253, 1445 |
| TatI | WGTACW | 3 cut(s) | 48, 1190, 1603 |
| TauI | GCSGC | 1 cut(s) | 107 |
| TfiI | GAWTC | 2 cut(s) | 973, 1514 |
| Tru1I | TTAA | 6 cut(s) | 342, 842, 1008, 1056, 1242, 1533 |
| Tru9I | TTAA | 6 cut(s) | 342, 842, 1008, 1056, 1242, 1533 |
| TscAI | CASTG | 3 cut(s) | 241, 532, 582 |
| TseFI | GTSAC | 3 cut(s) | 1289, 1377, 1555 |
| TseI | GCWGC | 5 cut(s) | 328, 710, 1145, 1232, 1477 |
| Tsp45I | GTSAC | 3 cut(s) | 1289, 1377, 1555 |
| TspDTI | ATGAA | 4 cut(s) | 61, 965, 1131, 1242 |
| TspRI | CASTG | 3 cut(s) | 241, 532, 582 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 37, 307 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 309 |
| XapI | RAATTY | 1 cut(s) | 1014 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 14 |
| XmiI | GTMKAC | 1 cut(s) | 117 |
| XspI | CTAG | 6 cut(s) | 777, 1334, 1521, 1527, 1551, 1632 |
| ZrmI | AGTACT | 2 cut(s) | 1192, 1605 |