May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44330 |
| fragaria_vesca | FvH4_3g25670 FvH4_3g25670 FvH4_3g25670 FvH4_3g25670 |
| malus_domestica | MD03G1149800.v1.1 MD11G1168600.v1.1 |
| prunus_persica | Prupe.6G135800_v2.0.a1 |
| pyrus_communis | pycom11g14130 |
| rosa_chinensis | RchiOBHm_Chr5g0045881 |
| rosa_laevigata | RLG00000034394 |
| rosa_multiflora | Rmu_sc0001212.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00028740 Rroxscaffold_1G00035230 Rroxscaffold_2G00117520 Rroxscaffold_2G00117530 |
| rosa_rugosa | Rorug05G0226200 Rorug05G0226300 |
| rosa_samantha | Rh5AG307700 Rh5BG316000 Rh5CG342200 Rh5DG326300 |
| rosa_wichuraiana | Rw5G028810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 870 |
| Acc36I | ACCTGC | 1 cut(s) | 553 |
| AccB1I | GGYRCC | 3 cut(s) | 36, 403, 1405 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 46 |
| AccBSI | CCGCTC | 1 cut(s) | 11 |
| AccI | GTMKAC | 1 cut(s) | 126 |
| AccII | CGCG | 2 cut(s) | 606, 1687 |
| AciI | CCGC | 7 cut(s) | 9, 27, 30, 114, 523, 564, 759 |
| AclI | AACGTT | 1 cut(s) | 1314 |
| AclWI | GGATC | 4 cut(s) | 136, 181, 1386, 1606 |
| AcoI | YGGCCR | 1 cut(s) | 423 |
| AcsI | RAATTY | 1 cut(s) | 1023 |
| AcuI | CTGAAG | 1 cut(s) | 1097 |
| AcyI | GRCGYC | 4 cut(s) | 20, 37, 111, 1406 |
| AfaI | GTAC | 3 cut(s) | 59, 149, 244 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 29, 46, 320 |
| AflIII | ACRYGT | 1 cut(s) | 129 |
| AgsI | TTSAA | 8 cut(s) | 214, 359, 434, 485, 949, 1319, 1447, 1527 |
| AjiI | CACGTC | 1 cut(s) | 130 |
| AjnI | CCWGG | 1 cut(s) | 39 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1439, 1471 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1299, 1331 |
| AluBI | AGCT | 8 cut(s) | 103, 574, 676, 722, 903, 1115, 1264, 1703 |
| AluI | AGCT | 8 cut(s) | 103, 574, 676, 722, 903, 1115, 1264, 1703 |
| Alw21I | GWGCWC | 2 cut(s) | 105, 166 |
| AlwI | GGATC | 4 cut(s) | 136, 181, 1386, 1606 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 316, 725 |
| Ama87I | CYCGRG | 2 cut(s) | 1107, 1398 |
| AoxI | GGCC | 2 cut(s) | 423, 1060 |
| ApeKI | GCWGC | 5 cut(s) | 310, 337, 719, 1154, 1486 |
| ApoI | RAATTY | 1 cut(s) | 1023 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1558, 1590 |
| AseI | ATTAAT | 1 cut(s) | 1092 |
| AspLEI | GCGC | 5 cut(s) | 39, 73, 606, 608, 1408 |
| AspS9I | GGNCC | 2 cut(s) | 863, 1060 |
| AsuC2I | CCSGG | 1 cut(s) | 24 |
| AsuHPI | GGTGA | 2 cut(s) | 603, 1489 |
| AsuNHI | GCTAGC | 1 cut(s) | 1535 |
| AvaI | CYCGRG | 2 cut(s) | 1107, 1398 |
| AvaII | GGWCC | 1 cut(s) | 863 |
| BanI | GGYRCC | 3 cut(s) | 36, 403, 1405 |
| BanII | GRGCYC | 1 cut(s) | 105 |
| BbsI | GAAGAC | 2 cut(s) | 70, 1467 |
| Bbv12I | GWGCWC | 2 cut(s) | 105, 166 |
| BbvI | GCAGC | 5 cut(s) | 322, 324, 731, 1141, 1498 |
| BccI | CCATC | 5 cut(s) | 389, 626, 630, 1211, 1496 |
| BceAI | ACGGC | 1 cut(s) | 1154 |
| BciT130I | CCWGG | 1 cut(s) | 41 |
| BciVI | GTATCC | 1 cut(s) | 560 |
| BclI | TGATCA | 2 cut(s) | 907, 1608 |
| BcnI | CCSGG | 1 cut(s) | 24 |
| BfaI | CTAG | 6 cut(s) | 786, 1265, 1530, 1536, 1560, 1641 |
| BfmI | CTRYAG | 1 cut(s) | 690 |
| BfoI | RGCGCY | 2 cut(s) | 40, 1409 |
| BfuAI | ACCTGC | 1 cut(s) | 553 |
| BfuI | GTATCC | 1 cut(s) | 560 |
| BisI | GCNGC | 8 cut(s) | 28, 31, 114, 311, 338, 720, 1155, 1487 |
| BlsI | GCNGC | 8 cut(s) | 29, 32, 115, 312, 339, 721, 1156, 1488 |
| Bme1390I | CCNGG | 2 cut(s) | 24, 41 |
| Bme18I | GGWCC | 1 cut(s) | 863 |
| BmeT110I | CYCGRG | 2 cut(s) | 1107, 1398 |
| BmgBI | CACGTC | 1 cut(s) | 130 |
| BmgT120I | GGNCC | 2 cut(s) | 863, 1060 |
| BmiI | GGNNCC | 3 cut(s) | 38, 405, 1407 |
| BmrFI | CCNGG | 2 cut(s) | 24, 41 |
| BmrI | ACTGGG | 1 cut(s) | 1067 |
| BmsI | GCATC | 3 cut(s) | 520, 617, 707 |
| BmtI | GCTAGC | 1 cut(s) | 1539 |
| BmuI | ACTGGG | 1 cut(s) | 1067 |
| BpiI | GAAGAC | 2 cut(s) | 70, 1467 |
| BpuEI | CTTGAG | 1 cut(s) | 797 |
| BpuMI | CCSGG | 1 cut(s) | 24 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1094 |
| BsaHI | GRCGYC | 4 cut(s) | 20, 37, 111, 1406 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 41, 71 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 29, 46, 320 |
| Bse1I | ACTGG | 6 cut(s) | 145, 407, 541, 565, 1062, 1207 |
| Bse3DI | GCAATG | 1 cut(s) | 757 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1094 |
| BseBI | CCWGG | 1 cut(s) | 41 |
| BseGI | GGATG | 3 cut(s) | 255, 641, 1512 |
| BseJI | GATNNNNATC | 1 cut(s) | 1094 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 29, 46, 320 |
| BseMI | GCAATG | 1 cut(s) | 757 |
| BseMII | CTCAG | 2 cut(s) | 1133, 1263 |
| BseNI | ACTGG | 6 cut(s) | 145, 407, 541, 565, 1062, 1207 |
| BsePI | GCGCGC | 1 cut(s) | 604 |
| BseXI | GCAGC | 5 cut(s) | 322, 324, 731, 1141, 1498 |
| BsgI | GTGCAG | 1 cut(s) | 1505 |
| Bsh1236I | CGCG | 2 cut(s) | 606, 1687 |
| BshFI | GGCC | 2 cut(s) | 425, 1062 |
| BshNI | GGYRCC | 3 cut(s) | 36, 403, 1405 |
| BsiHKAI | GWGCWC | 2 cut(s) | 105, 166 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1107, 1398 |
| BsiSI | CCGG | 1 cut(s) | 24 |
| BslFI | GGGAC | 1 cut(s) | 980 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 29, 46, 320 |
| BsmFI | GGGAC | 1 cut(s) | 980 |
| BsmI | GAATGC | 1 cut(s) | 381 |
| BsnI | GGCC | 2 cut(s) | 425, 1062 |
| BsoBI | CYCGRG | 2 cut(s) | 1107, 1398 |
| Bsp1286I | GDGCHC | 2 cut(s) | 105, 166 |
| Bsp143I | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| BspACI | CCGC | 7 cut(s) | 9, 27, 30, 114, 523, 564, 759 |
| BspANI | GGCC | 2 cut(s) | 425, 1062 |
| BspCNI | CTCAG | 2 cut(s) | 1134, 1264 |
| BspFNI | CGCG | 2 cut(s) | 606, 1687 |
| BspHI | TCATGA | 1 cut(s) | 1300 |
| BspLI | GGNNCC | 3 cut(s) | 38, 405, 1407 |
| BspMI | ACCTGC | 1 cut(s) | 553 |
| BspOI | GCTAGC | 1 cut(s) | 1539 |
| BspPI | GGATC | 4 cut(s) | 136, 181, 1386, 1606 |
| BspT107I | GGYRCC | 3 cut(s) | 36, 403, 1405 |
| BsrBI | CCGCTC | 1 cut(s) | 11 |
| BsrDI | GCAATG | 1 cut(s) | 757 |
| BsrI | ACTGG | 6 cut(s) | 145, 407, 541, 565, 1062, 1207 |
| BssHII | GCGCGC | 1 cut(s) | 604 |
| BssMI | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| BssNI | GRCGYC | 4 cut(s) | 20, 37, 111, 1406 |
| Bst2UI | CCWGG | 1 cut(s) | 41 |
| Bst4CI | ACNGT | 6 cut(s) | 121, 247, 1131, 1191, 1337, 1386 |
| BstACI | GRCGYC | 4 cut(s) | 20, 37, 111, 1406 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 725, 1495 |
| BstC8I | GCNNGC | 6 cut(s) | 35, 94, 205, 606, 917, 1537 |
| BstDEI | CTNAG | 3 cut(s) | 816, 1142, 1272 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 318 |
| BstF5I | GGATG | 3 cut(s) | 255, 641, 1512 |
| BstFNI | CGCG | 2 cut(s) | 606, 1687 |
| BstH2I | RGCGCY | 2 cut(s) | 40, 1409 |
| BstHHI | GCGC | 5 cut(s) | 39, 73, 606, 608, 1408 |
| BstKTI | GATC | 8 cut(s) | 144, 176, 235, 910, 1381, 1601, 1611, 1657 |
| BstMBI | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 36, 334, 509, 695, 725, 756, 1495 |
| BstNI | CCWGG | 1 cut(s) | 41 |
| BstSCI | CCNGG | 2 cut(s) | 22, 39 |
| BstSFI | CTRYAG | 1 cut(s) | 690 |
| BstUI | CGCG | 2 cut(s) | 606, 1687 |
| BstV1I | GCAGC | 5 cut(s) | 322, 324, 731, 1141, 1498 |
| BstV2I | GAAGAC | 2 cut(s) | 70, 1467 |
| BstX2I | RGATCY | 2 cut(s) | 173, 1378 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 203 |
| BstYI | RGATCY | 2 cut(s) | 173, 1378 |
| BsuI | GTATCC | 1 cut(s) | 560 |
| BsuRI | GGCC | 2 cut(s) | 425, 1062 |
| BtrI | CACGTC | 1 cut(s) | 130 |
| BtsCI | GGATG | 3 cut(s) | 255, 641, 1512 |
| BtsIMutI | CAGTG | 6 cut(s) | 288, 414, 534, 591, 741, 1200 |
| BveI | ACCTGC | 1 cut(s) | 553 |
| Cac8I | GCNNGC | 6 cut(s) | 35, 94, 205, 606, 917, 1537 |
| CaiI | CAGNNNCTG | 2 cut(s) | 316, 725 |
| CciI | TCATGA | 1 cut(s) | 1300 |
| CfoI | GCGC | 5 cut(s) | 39, 73, 606, 608, 1408 |
| Cfr13I | GGNCC | 2 cut(s) | 863, 1060 |
| CseI | GACGC | 2 cut(s) | 28, 119 |
| Csp6I | GTAC | 3 cut(s) | 58, 148, 243 |
| CviAII | CATG | 6 cut(s) | 200, 963, 986, 1124, 1301, 1490 |
| CviQI | GTAC | 3 cut(s) | 58, 148, 243 |
| DdeI | CTNAG | 3 cut(s) | 816, 1142, 1272 |
| DinI | GGCGCC | 2 cut(s) | 38, 1407 |
| DpnI | GATC | 8 cut(s) | 143, 175, 234, 909, 1380, 1600, 1610, 1656 |
| DpnII | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| EaeI | YGGCCR | 1 cut(s) | 423 |
| EciI | GGCGGA | 1 cut(s) | 579 |
| Ecl136II | GAGCTC | 1 cut(s) | 103 |
| Eco24I | GRGCYC | 1 cut(s) | 105 |
| Eco47I | GGWCC | 1 cut(s) | 863 |
| Eco53kI | GAGCTC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 1097 |
| Eco88I | CYCGRG | 2 cut(s) | 1107, 1398 |
| EcoICRI | GAGCTC | 1 cut(s) | 103 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 318 |
| EcoO109I | RGGNCCY | 1 cut(s) | 863 |
| EcoRII | CCWGG | 1 cut(s) | 39 |
| EcoT38I | GRGCYC | 1 cut(s) | 105 |
| EgeI | GGCGCC | 2 cut(s) | 38, 1407 |
| EheI | GGCGCC | 2 cut(s) | 38, 1407 |
| FaeI | CATG | 6 cut(s) | 203, 966, 989, 1127, 1304, 1493 |
| FaqI | GGGAC | 1 cut(s) | 980 |
| FatI | CATG | 6 cut(s) | 199, 962, 985, 1123, 1300, 1489 |
| FbaI | TGATCA | 2 cut(s) | 907, 1608 |
| FblI | GTMKAC | 1 cut(s) | 126 |
| Fnu4HI | GCNGC | 8 cut(s) | 28, 31, 114, 311, 338, 720, 1155, 1487 |
| FokI | GGATG | 3 cut(s) | 242, 648, 1519 |
| FriOI | GRGCYC | 1 cut(s) | 105 |
| Fsp4HI | GCNGC | 8 cut(s) | 28, 31, 114, 311, 338, 720, 1155, 1487 |
| FspBI | CTAG | 6 cut(s) | 786, 1265, 1530, 1536, 1560, 1641 |
| GlaI | GCGC | 5 cut(s) | 38, 72, 605, 607, 1407 |
| GluI | GCNGC | 8 cut(s) | 28, 31, 114, 311, 338, 720, 1155, 1487 |
| HaeII | RGCGCY | 2 cut(s) | 40, 1409 |
| HaeIII | GGCC | 2 cut(s) | 425, 1062 |
| HapII | CCGG | 1 cut(s) | 24 |
| HgaI | GACGC | 2 cut(s) | 28, 119 |
| HhaI | GCGC | 5 cut(s) | 39, 73, 606, 608, 1408 |
| Hin1I | GRCGYC | 4 cut(s) | 20, 37, 111, 1406 |
| Hin1II | CATG | 6 cut(s) | 203, 966, 989, 1127, 1304, 1493 |
| Hin6I | GCGC | 5 cut(s) | 37, 71, 604, 606, 1406 |
| HinP1I | GCGC | 5 cut(s) | 37, 71, 604, 606, 1406 |
| HincII | GTYRAC | 3 cut(s) | 127, 542, 852 |
| HindII | GTYRAC | 3 cut(s) | 127, 542, 852 |
| HindIII | AAGCTT | 1 cut(s) | 572 |
| HinfI | GANTC | 5 cut(s) | 50, 180, 982, 1170, 1523 |
| HpaI | GTTAAC | 1 cut(s) | 852 |
| HpaII | CCGG | 1 cut(s) | 24 |
| HphI | GGTGA | 2 cut(s) | 603, 1489 |
| Hpy166II | GTNNAC | 4 cut(s) | 127, 542, 852, 1512 |
| Hpy188I | TCNGA | 5 cut(s) | 173, 232, 900, 1077, 1253 |
| Hpy188III | TCNNGA | 8 cut(s) | 177, 645, 776, 858, 1167, 1184, 1301, 1649 |
| Hpy8I | GTNNAC | 4 cut(s) | 127, 542, 852, 1512 |
| Hpy99I | CGWCG | 6 cut(s) | 22, 113, 125, 128, 131, 1677 |
| HpyAV | CCTTC | 6 cut(s) | 292, 822, 1025, 1298, 1365, 1444 |
| HpyCH4III | ACNGT | 6 cut(s) | 121, 247, 1131, 1191, 1337, 1386 |
| HpyCH4IV | ACGT | 3 cut(s) | 129, 1314, 1545 |
| HpyCH4V | TGCA | 3 cut(s) | 554, 1244, 1486 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 36, 334, 509, 695, 725, 756, 1495 |
| HpyF3I | CTNAG | 3 cut(s) | 816, 1142, 1272 |
| HpySE526I | ACGT | 3 cut(s) | 129, 1314, 1545 |
| Hsp92I | GRCGYC | 4 cut(s) | 20, 37, 111, 1406 |
| Hsp92II | CATG | 6 cut(s) | 203, 966, 989, 1127, 1304, 1493 |
| HspAI | GCGC | 5 cut(s) | 37, 71, 604, 606, 1406 |
| KasI | GGCGCC | 2 cut(s) | 36, 1405 |
| Ksp22I | TGATCA | 2 cut(s) | 907, 1608 |
| KspAI | GTTAAC | 1 cut(s) | 852 |
| Kzo9I | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| LmnI | GCTCC | 5 cut(s) | 169, 727, 900, 1120, 1186 |
| Lsp1109I | GCAGC | 5 cut(s) | 322, 324, 731, 1141, 1498 |
| LweI | GCATC | 3 cut(s) | 520, 617, 707 |
| MaeI | CTAG | 6 cut(s) | 786, 1265, 1530, 1536, 1560, 1641 |
| MaeII | ACGT | 3 cut(s) | 129, 1314, 1545 |
| MaeIII | GTNAC | 4 cut(s) | 286, 1147, 1386, 1564 |
| MalI | GATC | 8 cut(s) | 143, 175, 234, 909, 1380, 1600, 1610, 1656 |
| MbiI | CCGCTC | 1 cut(s) | 11 |
| MboI | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| MboII | GAAGA | 8 cut(s) | 70, 79, 424, 497, 1064, 1099, 1459, 1472 |
| MflI | RGATCY | 2 cut(s) | 173, 1378 |
| MhlI | GDGCHC | 2 cut(s) | 105, 166 |
| MluCI | AATT | 5 cut(s) | 415, 437, 835, 1023, 1454 |
| Mly113I | GGCGCC | 2 cut(s) | 37, 1406 |
| MlyI | GAGTC | 3 cut(s) | 59, 174, 1164 |
| MmeI | TCCRAC | 3 cut(s) | 27, 704, 1356 |
| MseI | TTAA | 5 cut(s) | 851, 1065, 1092, 1350, 1542 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1293 |
| MspI | CCGG | 1 cut(s) | 24 |
| MspR9I | CCNGG | 2 cut(s) | 24, 41 |
| Mva1269I | GAATGC | 1 cut(s) | 381 |
| MvaI | CCWGG | 1 cut(s) | 41 |
| MvnI | CGCG | 2 cut(s) | 606, 1687 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 36, 334, 509, 695, 725, 756, 1495 |
| NarI | GGCGCC | 2 cut(s) | 37, 1406 |
| NciI | CCSGG | 1 cut(s) | 24 |
| NdeII | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| NheI | GCTAGC | 1 cut(s) | 1535 |
| NlaIII | CATG | 6 cut(s) | 203, 966, 989, 1127, 1304, 1493 |
| NlaIV | GGNNCC | 3 cut(s) | 38, 405, 1407 |
| NmuCI | GTSAC | 3 cut(s) | 286, 1386, 1564 |
| PaeR7I | CTCGAG | 1 cut(s) | 1398 |
| PagI | TCATGA | 1 cut(s) | 1300 |
| PauI | GCGCGC | 1 cut(s) | 604 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 117 |
| PctI | GAATGC | 1 cut(s) | 381 |
| PfeI | GAWTC | 2 cut(s) | 982, 1523 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 46 |
| PkrI | GCNGC | 8 cut(s) | 29, 32, 115, 312, 339, 721, 1156, 1488 |
| PleI | GAGTC | 3 cut(s) | 58, 174, 1164 |
| PluTI | GGCGCC | 2 cut(s) | 40, 1409 |
| PpsI | GAGTC | 3 cut(s) | 58, 174, 1164 |
| PpuMI | RGGWCCY | 1 cut(s) | 863 |
| PshBI | ATTAAT | 1 cut(s) | 1092 |
| PsiI | TTATAA | 1 cut(s) | 870 |
| Psp124BI | GAGCTC | 1 cut(s) | 105 |
| Psp1406I | AACGTT | 1 cut(s) | 1314 |
| Psp5II | RGGWCCY | 1 cut(s) | 863 |
| Psp6I | CCWGG | 1 cut(s) | 39 |
| PspGI | CCWGG | 1 cut(s) | 39 |
| PspN4I | GGNNCC | 3 cut(s) | 38, 405, 1407 |
| PspPI | GGNCC | 2 cut(s) | 863, 1060 |
| PspPPI | RGGWCCY | 1 cut(s) | 863 |
| PspXI | VCTCGAGB | 1 cut(s) | 1398 |
| PstNI | CAGNNNCTG | 2 cut(s) | 316, 725 |
| PsuI | RGATCY | 2 cut(s) | 173, 1378 |
| PteI | GCGCGC | 1 cut(s) | 604 |
| RsaI | GTAC | 3 cut(s) | 59, 149, 244 |
| RsaNI | GTAC | 3 cut(s) | 58, 148, 243 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1293 |
| SacI | GAGCTC | 1 cut(s) | 105 |
| SalI | GTCGAC | 1 cut(s) | 125 |
| SaqAI | TTAA | 5 cut(s) | 851, 1065, 1092, 1350, 1542 |
| SatI | GCNGC | 8 cut(s) | 28, 31, 114, 311, 338, 720, 1155, 1487 |
| Sau3AI | GATC | 8 cut(s) | 141, 173, 232, 907, 1378, 1598, 1608, 1654 |
| Sau96I | GGNCC | 2 cut(s) | 863, 1060 |
| SchI | GAGTC | 3 cut(s) | 59, 174, 1164 |
| ScrFI | CCNGG | 2 cut(s) | 24, 41 |
| SduI | GDGCHC | 2 cut(s) | 105, 166 |
| SfaNI | GCATC | 3 cut(s) | 520, 617, 707 |
| SfcI | CTRYAG | 1 cut(s) | 690 |
| SfoI | GGCGCC | 2 cut(s) | 38, 1407 |
| Sfr274I | CTCGAG | 1 cut(s) | 1398 |
| SgrDI | CGTCGACG | 1 cut(s) | 125 |
| SinI | GGWCC | 1 cut(s) | 863 |
| SlaI | CTCGAG | 1 cut(s) | 1398 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1293 |
| SmlI | CTYRAG | 3 cut(s) | 12, 776, 1398 |
| SmoI | CTYRAG | 3 cut(s) | 12, 776, 1398 |
| Sse9I | AATT | 5 cut(s) | 415, 437, 835, 1023, 1454 |
| SsiI | CCGC | 7 cut(s) | 9, 27, 30, 114, 523, 564, 759 |
| SspDI | GGCGCC | 2 cut(s) | 36, 1405 |
| SspMI | CTAG | 6 cut(s) | 786, 1265, 1530, 1536, 1560, 1641 |
| SstI | GAGCTC | 1 cut(s) | 105 |
| StyD4I | CCNGG | 2 cut(s) | 22, 39 |
| TaaI | ACNGT | 6 cut(s) | 121, 247, 1131, 1191, 1337, 1386 |
| TaiI | ACGT | 3 cut(s) | 132, 1317, 1548 |
| TaqI | TCGA | 6 cut(s) | 62, 126, 178, 1399, 1572, 1672 |
| TasI | AATT | 5 cut(s) | 415, 437, 835, 1023, 1454 |
| TatI | WGTACW | 1 cut(s) | 57 |
| TauI | GCSGC | 3 cut(s) | 30, 33, 116 |
| TfiI | GAWTC | 2 cut(s) | 982, 1523 |
| Tru1I | TTAA | 5 cut(s) | 851, 1065, 1092, 1350, 1542 |
| Tru9I | TTAA | 5 cut(s) | 851, 1065, 1092, 1350, 1542 |
| TscAI | CASTG | 6 cut(s) | 295, 414, 541, 591, 741, 1207 |
| TseFI | GTSAC | 3 cut(s) | 286, 1386, 1564 |
| TseI | GCWGC | 5 cut(s) | 310, 337, 719, 1154, 1486 |
| Tsp45I | GTSAC | 3 cut(s) | 286, 1386, 1564 |
| TspDTI | ATGAA | 8 cut(s) | 70, 374, 437, 974, 1044, 1140, 1251, 1317 |
| TspRI | CASTG | 6 cut(s) | 295, 414, 541, 591, 741, 1207 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 46 |
| VpaK11BI | GGWCC | 1 cut(s) | 863 |
| VspI | ATTAAT | 1 cut(s) | 1092 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 318 |
| XapI | RAATTY | 1 cut(s) | 1023 |
| XhoI | CTCGAG | 1 cut(s) | 1398 |
| XmiI | GTMKAC | 1 cut(s) | 126 |
| XspI | CTAG | 6 cut(s) | 786, 1265, 1530, 1536, 1560, 1641 |