Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g00672 FvH4_3g26580 |
| malus_domestica | MD03G1153100.v1.1 |
| prunus_persica | Prupe.6G140100_v2.0.a1 |
| pyrus_communis | pycom03g10670 |
| rosa_chinensis | RchiOBHm_Chr5g0048221 |
| rosa_laevigata | RLG00000034503 |
| rosa_multiflora | Rmu_sc0001408.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00033660 |
| rosa_rugosa | Rorug05G0237300 |
| rosa_samantha | Rh5AG316300 Rh5BG327000 Rh5CG353200 Rh5DG338100 |
| rosa_wichuraiana | Rw5G029650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1102 |
| Acc36I | ACCTGC | 2 cut(s) | 1046, 1102 |
| Acc65I | GGTACC | 1 cut(s) | 1001 |
| AccB1I | GGYRCC | 1 cut(s) | 1001 |
| AccI | GTMKAC | 1 cut(s) | 2406 |
| AciI | CCGC | 4 cut(s) | 579, 1531, 2093, 2312 |
| AclWI | GGATC | 5 cut(s) | 724, 737, 1028, 1696, 1709 |
| AcoI | YGGCCR | 2 cut(s) | 466, 2086 |
| AcsI | RAATTY | 7 cut(s) | 638, 664, 940, 1549, 1837, 2116, 2224 |
| AcuI | CTGAAG | 4 cut(s) | 47, 593, 1999, 2049 |
| AdeI | CACNNNGTG | 1 cut(s) | 1787 |
| AfaI | GTAC | 6 cut(s) | 284, 683, 963, 1003, 1206, 2391 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1642 |
| AflII | CTTAAG | 1 cut(s) | 2138 |
| AflIII | ACRYGT | 3 cut(s) | 279, 2051, 2392 |
| AgeI | ACCGGT | 1 cut(s) | 2480 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 841 |
| AjnI | CCWGG | 1 cut(s) | 2356 |
| Alw26I | GTCTC | 3 cut(s) | 429, 448, 902 |
| AlwI | GGATC | 5 cut(s) | 724, 737, 1028, 1696, 1709 |
| Ama87I | CYCGRG | 1 cut(s) | 1503 |
| AoxI | GGCC | 4 cut(s) | 466, 1282, 1594, 2086 |
| ApeKI | GCWGC | 4 cut(s) | 10, 512, 2150, 2557 |
| ApoI | RAATTY | 7 cut(s) | 638, 664, 940, 1549, 1837, 2116, 2224 |
| AsiGI | ACCGGT | 1 cut(s) | 2480 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1311 |
| Asp718I | GGTACC | 1 cut(s) | 1001 |
| AspLEI | GCGC | 1 cut(s) | 2177 |
| AsuC2I | CCSGG | 1 cut(s) | 2090 |
| AsuHPI | GGTGA | 2 cut(s) | 1639, 1895 |
| AvaI | CYCGRG | 1 cut(s) | 1503 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2381, 2414 |
| BalI | TGGCCA | 1 cut(s) | 468 |
| BamHI | GGATCC | 2 cut(s) | 729, 1701 |
| BanI | GGYRCC | 1 cut(s) | 1001 |
| BanII | GRGCYC | 3 cut(s) | 805, 1992, 2167 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1188, 1220 |
| BbsI | GAAGAC | 2 cut(s) | 312, 1042 |
| BbvI | GCAGC | 3 cut(s) | 499, 2137, 2544 |
| BccI | CCATC | 1 cut(s) | 2424 |
| BceAI | ACGGC | 2 cut(s) | 1124, 1485 |
| BciT130I | CCWGG | 1 cut(s) | 2358 |
| BclI | TGATCA | 4 cut(s) | 366, 1161, 1464, 1942 |
| BcnI | CCSGG | 1 cut(s) | 2090 |
| BcoDI | GTCTC | 3 cut(s) | 429, 448, 902 |
| BfaI | CTAG | 1 cut(s) | 741 |
| BfmI | CTRYAG | 2 cut(s) | 1356, 2403 |
| BfrI | CTTAAG | 1 cut(s) | 2138 |
| BfuAI | ACCTGC | 2 cut(s) | 1046, 1102 |
| BglII | AGATCT | 2 cut(s) | 408, 2077 |
| BisI | GCNGC | 4 cut(s) | 11, 513, 2151, 2558 |
| BlsI | GCNGC | 4 cut(s) | 12, 514, 2152, 2559 |
| BmcAI | AGTACT | 1 cut(s) | 1206 |
| Bme1390I | CCNGG | 2 cut(s) | 2090, 2358 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 841 |
| BmeT110I | CYCGRG | 1 cut(s) | 1503 |
| BmiI | GGNNCC | 6 cut(s) | 731, 923, 1003, 1035, 1230, 1703 |
| BmrFI | CCNGG | 2 cut(s) | 2090, 2358 |
| BmsI | GCATC | 5 cut(s) | 191, 346, 484, 1419, 2049 |
| BoxI | GACNNNNGTC | 1 cut(s) | 312 |
| BpiI | GAAGAC | 2 cut(s) | 312, 1042 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 422, 454, 1213, 1245 |
| BpmI | CTGGAG | 1 cut(s) | 245 |
| BpuEI | CTTGAG | 4 cut(s) | 173, 1208, 1464, 1701 |
| BpuMI | CCSGG | 1 cut(s) | 2090 |
| Bsa29I | ATCGAT | 1 cut(s) | 675 |
| BsaJI | CCNNGG | 2 cut(s) | 925, 1239 |
| BsaWI | WCCGGW | 1 cut(s) | 2480 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 104, 134 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1642 |
| Bse118I | RCCGGY | 1 cut(s) | 2480 |
| Bse1I | ACTGG | 1 cut(s) | 488 |
| Bse3DI | GCAATG | 3 cut(s) | 201, 522, 1467 |
| BseBI | CCWGG | 1 cut(s) | 2358 |
| BseCI | ATCGAT | 1 cut(s) | 675 |
| BseDI | CCNNGG | 2 cut(s) | 925, 1239 |
| BseGI | GGATG | 8 cut(s) | 12, 337, 499, 1023, 1249, 1979, 2320, 2419 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1642 |
| BseMI | GCAATG | 3 cut(s) | 201, 522, 1467 |
| BseMII | CTCAG | 5 cut(s) | 420, 702, 887, 913, 2531 |
| BseNI | ACTGG | 1 cut(s) | 488 |
| BseRI | GAGGAG | 1 cut(s) | 2120 |
| BseXI | GCAGC | 3 cut(s) | 499, 2137, 2544 |
| BsgI | GTGCAG | 2 cut(s) | 1196, 1918 |
| BshFI | GGCC | 4 cut(s) | 468, 1284, 1596, 2088 |
| BshNI | GGYRCC | 1 cut(s) | 1001 |
| BshTI | ACCGGT | 1 cut(s) | 2480 |
| BshVI | ATCGAT | 1 cut(s) | 675 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1503 |
| BsiSI | CCGG | 2 cut(s) | 2089, 2481 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1642 |
| BsmAI | GTCTC | 3 cut(s) | 429, 448, 902 |
| BsmI | GAATGC | 3 cut(s) | 1369, 1472, 1858 |
| BsnI | GGCC | 4 cut(s) | 468, 1284, 1596, 2088 |
| BsoBI | CYCGRG | 1 cut(s) | 1503 |
| Bsp1286I | GDGCHC | 3 cut(s) | 805, 1992, 2167 |
| Bsp1407I | TGTACA | 1 cut(s) | 681 |
| BspACI | CCGC | 4 cut(s) | 579, 1531, 2093, 2312 |
| BspANI | GGCC | 4 cut(s) | 468, 1284, 1596, 2088 |
| BspCNI | CTCAG | 5 cut(s) | 421, 703, 886, 912, 2530 |
| BspDI | ATCGAT | 1 cut(s) | 675 |
| BspLI | GGNNCC | 6 cut(s) | 731, 923, 1003, 1035, 1230, 1703 |
| BspMI | ACCTGC | 2 cut(s) | 1046, 1102 |
| BspPI | GGATC | 5 cut(s) | 724, 737, 1028, 1696, 1709 |
| BspQI | GCTCTTC | 2 cut(s) | 612, 810 |
| BspT107I | GGYRCC | 1 cut(s) | 1001 |
| BspTI | CTTAAG | 1 cut(s) | 2138 |
| BsrDI | GCAATG | 3 cut(s) | 201, 522, 1467 |
| BsrFI | RCCGGY | 1 cut(s) | 2480 |
| BsrGI | TGTACA | 1 cut(s) | 681 |
| BsrI | ACTGG | 1 cut(s) | 488 |
| BssAI | RCCGGY | 1 cut(s) | 2480 |
| BssECI | CCNNGG | 2 cut(s) | 925, 1239 |
| BssT1I | CCWWGG | 2 cut(s) | 925, 1239 |
| Bst2UI | CCWGG | 1 cut(s) | 2358 |
| Bst4CI | ACNGT | 7 cut(s) | 329, 761, 839, 961, 1209, 1264, 2404 |
| Bst6I | CTCTTC | 3 cut(s) | 612, 810, 1351 |
| BstAFI | CTTAAG | 1 cut(s) | 2138 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1871, 2213 |
| BstAUI | TGTACA | 1 cut(s) | 681 |
| BstC8I | GCNNGC | 5 cut(s) | 49, 577, 979, 1014, 2571 |
| BstDEI | CTNAG | 9 cut(s) | 429, 711, 873, 899, 965, 1651, 2112, 2517, 2561 |
| BstEII | GGTNACC | 1 cut(s) | 1645 |
| BstF5I | GGATG | 8 cut(s) | 12, 337, 499, 1023, 1249, 1979, 2320, 2419 |
| BstHHI | GCGC | 1 cut(s) | 2177 |
| BstMAI | GTCTC | 3 cut(s) | 429, 448, 902 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 173, 1682, 1862, 1871, 2140, 2213, 2566 |
| BstNI | CCWGG | 1 cut(s) | 2358 |
| BstNSI | RCATGY | 8 cut(s) | 283, 975, 1016, 1295, 1674, 2055, 2181, 2396 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 312 |
| BstPI | GGTNACC | 1 cut(s) | 1645 |
| BstSCI | CCNGG | 2 cut(s) | 2088, 2356 |
| BstSFI | CTRYAG | 2 cut(s) | 1356, 2403 |
| BstV1I | GCAGC | 3 cut(s) | 499, 2137, 2544 |
| BstV2I | GAAGAC | 2 cut(s) | 312, 1042 |
| BstX2I | RGATCY | 4 cut(s) | 408, 729, 1701, 2077 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 241 |
| BstYI | RGATCY | 4 cut(s) | 408, 729, 1701, 2077 |
| Bsu15I | ATCGAT | 1 cut(s) | 675 |
| BsuRI | GGCC | 4 cut(s) | 468, 1284, 1596, 2088 |
| BsuTUI | ATCGAT | 1 cut(s) | 675 |
| BtsCI | GGATG | 8 cut(s) | 12, 337, 499, 1023, 1249, 1979, 2320, 2419 |
| BtsI | GCAGTG | 1 cut(s) | 2223 |
| BtsIMutI | CAGTG | 6 cut(s) | 495, 1171, 1672, 2223, 2400, 2525 |
| BveI | ACCTGC | 2 cut(s) | 1046, 1102 |
| Cac8I | GCNNGC | 5 cut(s) | 49, 577, 979, 1014, 2571 |
| CfoI | GCGC | 1 cut(s) | 2177 |
| Cfr10I | RCCGGY | 1 cut(s) | 2480 |
| ClaI | ATCGAT | 1 cut(s) | 675 |
| CseI | GACGC | 1 cut(s) | 317 |
| CsiI | ACCWGGT | 1 cut(s) | 2356 |
| Csp6I | GTAC | 6 cut(s) | 283, 682, 962, 1002, 1205, 2390 |
| CspAI | ACCGGT | 1 cut(s) | 2480 |
| CviQI | GTAC | 6 cut(s) | 283, 682, 962, 1002, 1205, 2390 |
| DdeI | CTNAG | 9 cut(s) | 429, 711, 873, 899, 965, 1651, 2112, 2517, 2561 |
| DraI | TTTAAA | 1 cut(s) | 2199 |
| DraIII | CACNNNGTG | 1 cut(s) | 1787 |
| DriI | GACNNNNNGTC | 1 cut(s) | 841 |
| EaeI | YGGCCR | 2 cut(s) | 466, 2086 |
| Eam1104I | CTCTTC | 3 cut(s) | 612, 810, 1351 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 841 |
| EarI | CTCTTC | 3 cut(s) | 612, 810, 1351 |
| Eco130I | CCWWGG | 2 cut(s) | 925, 1239 |
| Eco147I | AGGCCT | 1 cut(s) | 1596 |
| Eco24I | GRGCYC | 3 cut(s) | 805, 1992, 2167 |
| Eco57I | CTGAAG | 4 cut(s) | 47, 593, 1999, 2049 |
| Eco88I | CYCGRG | 1 cut(s) | 1503 |
| Eco91I | GGTNACC | 1 cut(s) | 1645 |
| EcoO65I | GGTNACC | 1 cut(s) | 1645 |
| EcoRI | GAATTC | 1 cut(s) | 1549 |
| EcoRII | CCWGG | 1 cut(s) | 2356 |
| EcoT14I | CCWWGG | 2 cut(s) | 925, 1239 |
| EcoT38I | GRGCYC | 3 cut(s) | 805, 1992, 2167 |
| ErhI | CCWWGG | 2 cut(s) | 925, 1239 |
| FauI | CCCGC | 1 cut(s) | 2086 |
| FauNDI | CATATG | 1 cut(s) | 810 |
| FbaI | TGATCA | 4 cut(s) | 366, 1161, 1464, 1942 |
| FblI | GTMKAC | 1 cut(s) | 2406 |
| Fnu4HI | GCNGC | 4 cut(s) | 11, 513, 2151, 2558 |
| FokI | GGATG | 8 cut(s) | 19, 324, 506, 1010, 1256, 1986, 2327, 2406 |
| FriOI | GRGCYC | 3 cut(s) | 805, 1992, 2167 |
| Fsp4HI | GCNGC | 4 cut(s) | 11, 513, 2151, 2558 |
| FspBI | CTAG | 1 cut(s) | 741 |
| GlaI | GCGC | 1 cut(s) | 2176 |
| GluI | GCNGC | 4 cut(s) | 11, 513, 2151, 2558 |
| GsuI | CTGGAG | 1 cut(s) | 245 |
| HaeIII | GGCC | 4 cut(s) | 468, 1284, 1596, 2088 |
| HapII | CCGG | 2 cut(s) | 2089, 2481 |
| HgaI | GACGC | 1 cut(s) | 317 |
| HhaI | GCGC | 1 cut(s) | 2177 |
| Hin6I | GCGC | 1 cut(s) | 2175 |
| HinP1I | GCGC | 1 cut(s) | 2175 |
| HincII | GTYRAC | 1 cut(s) | 1633 |
| HindII | GTYRAC | 1 cut(s) | 1633 |
| HindIII | AAGCTT | 4 cut(s) | 174, 1197, 2304, 2537 |
| HinfI | GANTC | 5 cut(s) | 245, 437, 895, 1820, 2249 |
| HpaI | GTTAAC | 1 cut(s) | 1633 |
| HpaII | CCGG | 2 cut(s) | 2089, 2481 |
| HphI | GGTGA | 2 cut(s) | 1639, 1895 |
| Hpy166II | GTNNAC | 6 cut(s) | 1064, 1091, 1251, 1633, 2400, 2407 |
| Hpy188I | TCNGA | 9 cut(s) | 318, 393, 525, 544, 798, 894, 1020, 1416, 2287 |
| Hpy188III | TCNNGA | 7 cut(s) | 262, 992, 1043, 1182, 1505, 1782, 1971 |
| Hpy8I | GTNNAC | 6 cut(s) | 1064, 1091, 1251, 1633, 2400, 2407 |
| Hpy99I | CGWCG | 2 cut(s) | 318, 2193 |
| HpyAV | CCTTC | 8 cut(s) | 47, 565, 565, 1586, 1614, 1880, 2276, 2425 |
| HpyCH4III | ACNGT | 7 cut(s) | 329, 761, 839, 961, 1209, 1264, 2404 |
| HpyCH4IV | ACGT | 1 cut(s) | 832 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 173, 1682, 1862, 1871, 2140, 2213, 2566 |
| HpyF3I | CTNAG | 9 cut(s) | 429, 711, 873, 899, 965, 1651, 2112, 2517, 2561 |
| HpySE526I | ACGT | 1 cut(s) | 832 |
| HspAI | GCGC | 1 cut(s) | 2175 |
| KpnI | GGTACC | 1 cut(s) | 1005 |
| Ksp22I | TGATCA | 4 cut(s) | 366, 1161, 1464, 1942 |
| KspAI | GTTAAC | 1 cut(s) | 1633 |
| LguI | GCTCTTC | 2 cut(s) | 612, 810 |
| LmnI | GCTCC | 1 cut(s) | 1234 |
| Lsp1109I | GCAGC | 3 cut(s) | 499, 2137, 2544 |
| LweI | GCATC | 5 cut(s) | 191, 346, 484, 1419, 2049 |
| MabI | ACCWGGT | 1 cut(s) | 2356 |
| MaeI | CTAG | 1 cut(s) | 741 |
| MaeII | ACGT | 1 cut(s) | 832 |
| MaeIII | GTNAC | 9 cut(s) | 147, 773, 833, 1372, 1645, 1654, 1753, 1768, 1829 |
| MboII | GAAGA | 9 cut(s) | 317, 599, 797, 1042, 1338, 1601, 2042, 2479, 2486 |
| MflI | RGATCY | 4 cut(s) | 408, 729, 1701, 2077 |
| MhlI | GDGCHC | 3 cut(s) | 805, 1992, 2167 |
| MlsI | TGGCCA | 1 cut(s) | 468 |
| MluNI | TGGCCA | 1 cut(s) | 468 |
| MlyI | GAGTC | 4 cut(s) | 239, 431, 904, 1814 |
| MmeI | TCCRAC | 5 cut(s) | 296, 335, 567, 734, 2072 |
| Mox20I | TGGCCA | 1 cut(s) | 468 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1311 |
| MscI | TGGCCA | 1 cut(s) | 468 |
| MslI | CAYNNNNRTG | 3 cut(s) | 342, 1011, 1028 |
| Msp20I | TGGCCA | 1 cut(s) | 468 |
| MspA1I | CMGCKG | 1 cut(s) | 1531 |
| MspCI | CTTAAG | 1 cut(s) | 2138 |
| MspI | CCGG | 2 cut(s) | 2089, 2481 |
| MspR9I | CCNGG | 2 cut(s) | 2090, 2358 |
| Mva1269I | GAATGC | 3 cut(s) | 1369, 1472, 1858 |
| MvaI | CCWGG | 1 cut(s) | 2358 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 173, 1682, 1862, 1871, 2140, 2213, 2566 |
| NciI | CCSGG | 1 cut(s) | 2090 |
| NdeI | CATATG | 1 cut(s) | 810 |
| NlaIV | GGNNCC | 6 cut(s) | 731, 923, 1003, 1035, 1230, 1703 |
| NmuCI | GTSAC | 5 cut(s) | 147, 833, 1645, 1753, 1829 |
| NspI | RCATGY | 8 cut(s) | 283, 975, 1016, 1295, 1674, 2055, 2181, 2396 |
| PaeI | GCATGC | 1 cut(s) | 1016 |
| PaeR7I | CTCGAG | 1 cut(s) | 1503 |
| PaqCI | CACCTGC | 1 cut(s) | 1102 |
| PceI | AGGCCT | 1 cut(s) | 1596 |
| PciI | ACATGT | 3 cut(s) | 279, 2051, 2392 |
| PciSI | GCTCTTC | 2 cut(s) | 612, 810 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1024, 1789 |
| PctI | GAATGC | 3 cut(s) | 1369, 1472, 1858 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1311 |
| PfeI | GAWTC | 1 cut(s) | 2249 |
| PflFI | GACNNNGTC | 1 cut(s) | 440 |
| PinAI | ACCGGT | 1 cut(s) | 2480 |
| PkrI | GCNGC | 4 cut(s) | 12, 514, 2152, 2559 |
| PleI | GAGTC | 4 cut(s) | 239, 431, 903, 1814 |
| PpsI | GAGTC | 4 cut(s) | 239, 431, 903, 1814 |
| PscI | ACATGT | 3 cut(s) | 279, 2051, 2392 |
| PshAI | GACNNNNGTC | 1 cut(s) | 312 |
| Psp6I | CCWGG | 1 cut(s) | 2356 |
| PspEI | GGTNACC | 1 cut(s) | 1645 |
| PspGI | CCWGG | 1 cut(s) | 2356 |
| PspN4I | GGNNCC | 6 cut(s) | 731, 923, 1003, 1035, 1230, 1703 |
| PsuI | RGATCY | 4 cut(s) | 408, 729, 1701, 2077 |
| PsyI | GACNNNGTC | 1 cut(s) | 440 |
| RsaI | GTAC | 6 cut(s) | 284, 683, 963, 1003, 1206, 2391 |
| RsaNI | GTAC | 6 cut(s) | 283, 682, 962, 1002, 1205, 2390 |
| RseI | CAYNNNNRTG | 3 cut(s) | 342, 1011, 1028 |
| SapI | GCTCTTC | 2 cut(s) | 612, 810 |
| SatI | GCNGC | 4 cut(s) | 11, 513, 2151, 2558 |
| ScaI | AGTACT | 1 cut(s) | 1206 |
| SchI | GAGTC | 4 cut(s) | 239, 431, 904, 1814 |
| ScrFI | CCNGG | 2 cut(s) | 2090, 2358 |
| SduI | GDGCHC | 3 cut(s) | 805, 1992, 2167 |
| SexAI | ACCWGGT | 1 cut(s) | 2356 |
| SfaNI | GCATC | 5 cut(s) | 191, 346, 484, 1419, 2049 |
| SfcI | CTRYAG | 2 cut(s) | 1356, 2403 |
| Sfr274I | CTCGAG | 1 cut(s) | 1503 |
| SlaI | CTCGAG | 1 cut(s) | 1503 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 342, 1011, 1028 |
| SmlI | CTYRAG | 6 cut(s) | 188, 1187, 1479, 1503, 1716, 2138 |
| SmoI | CTYRAG | 6 cut(s) | 188, 1187, 1479, 1503, 1716, 2138 |
| SphI | GCATGC | 1 cut(s) | 1016 |
| SseBI | AGGCCT | 1 cut(s) | 1596 |
| SsiI | CCGC | 4 cut(s) | 579, 1531, 2093, 2312 |
| SspI | AATATT | 1 cut(s) | 1689 |
| SspMI | CTAG | 1 cut(s) | 741 |
| StuI | AGGCCT | 1 cut(s) | 1596 |
| StyD4I | CCNGG | 2 cut(s) | 2088, 2356 |
| StyI | CCWWGG | 2 cut(s) | 925, 1239 |
| TaaI | ACNGT | 7 cut(s) | 329, 761, 839, 961, 1209, 1264, 2404 |
| TaiI | ACGT | 1 cut(s) | 835 |
| TaqI | TCGA | 3 cut(s) | 668, 675, 1504 |
| TatI | WGTACW | 3 cut(s) | 282, 681, 1204 |
| TfiI | GAWTC | 1 cut(s) | 2249 |
| TscAI | CASTG | 6 cut(s) | 495, 1171, 1672, 2223, 2407, 2525 |
| TseFI | GTSAC | 5 cut(s) | 147, 833, 1645, 1753, 1829 |
| TseI | GCWGC | 4 cut(s) | 10, 512, 2150, 2557 |
| Tsp45I | GTSAC | 5 cut(s) | 147, 833, 1645, 1753, 1829 |
| TspDTI | ATGAA | 8 cut(s) | 29, 96, 185, 435, 584, 797, 1304, 2444 |
| TspGWI | ACGGA | 1 cut(s) | 1016 |
| TspRI | CASTG | 6 cut(s) | 495, 1171, 1672, 2223, 2407, 2525 |
| Tth111I | GACNNNGTC | 1 cut(s) | 440 |
| Vha464I | CTTAAG | 1 cut(s) | 2138 |
| XapI | RAATTY | 7 cut(s) | 638, 664, 940, 1549, 1837, 2116, 2224 |
| XceI | RCATGY | 8 cut(s) | 283, 975, 1016, 1295, 1674, 2055, 2181, 2396 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 476 |
| XhoI | CTCGAG | 1 cut(s) | 1503 |
| XmiI | GTMKAC | 1 cut(s) | 2406 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1311 |
| XspI | CTAG | 1 cut(s) | 741 |
| ZrmI | AGTACT | 1 cut(s) | 1206 |