Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g00672 FvH4_3g26580 |
| malus_domestica | MD03G1153100.v1.1 |
| prunus_persica | Prupe.6G140100_v2.0.a1 |
| pyrus_communis | pycom03g10670 |
| rosa_chinensis | RchiOBHm_Chr5g0048221 |
| rosa_laevigata | RLG00000034503 |
| rosa_multiflora | Rmu_sc0001408.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00033660 |
| rosa_rugosa | Rorug05G0237300 |
| rosa_samantha | Rh5AG316300 Rh5BG327000 Rh5CG353200 Rh5DG338100 |
| rosa_wichuraiana | Rw5G029650 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2076 |
| AarI | CACCTGC | 1 cut(s) | 979 |
| Acc16I | TGCGCA | 1 cut(s) | 1813 |
| Acc36I | ACCTGC | 1 cut(s) | 979 |
| AccI | GTMKAC | 3 cut(s) | 258, 859, 1484 |
| AccII | CGCG | 2 cut(s) | 251, 2070 |
| AciI | CCGC | 1 cut(s) | 2687 |
| AclWI | GGATC | 5 cut(s) | 67, 601, 614, 1529, 2480 |
| AcoI | YGGCCR | 3 cut(s) | 97, 343, 1855 |
| AcsI | RAATTY | 7 cut(s) | 32, 514, 541, 1714, 1993, 2087, 2101 |
| AcuI | CTGAAG | 6 cut(s) | 122, 187, 470, 1876, 1926, 2000 |
| AcvI | CACGTG | 1 cut(s) | 2272 |
| AfaI | GTAC | 3 cut(s) | 560, 1083, 2268 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 324 |
| AflIII | ACRYGT | 4 cut(s) | 555, 1928, 2269, 2271 |
| AhlI | ACTAGT | 1 cut(s) | 1528 |
| AjnI | CCWGG | 3 cut(s) | 1512, 1988, 2233 |
| AleI | CACNNNNGTG | 1 cut(s) | 2707 |
| Alw21I | GWGCWC | 3 cut(s) | 577, 2044, 2790 |
| Alw26I | GTCTC | 3 cut(s) | 306, 325, 2447 |
| Alw44I | GTGCAC | 1 cut(s) | 573 |
| AlwI | GGATC | 5 cut(s) | 67, 601, 614, 1529, 2480 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1548 |
| Ama87I | CYCGRG | 1 cut(s) | 1380 |
| AoxI | GGCC | 7 cut(s) | 97, 343, 1159, 1471, 1855, 1986, 2545 |
| ApaLI | GTGCAC | 1 cut(s) | 573 |
| ApeKI | GCWGC | 6 cut(s) | 171, 651, 1186, 1579, 2027, 2093 |
| ApoI | RAATTY | 7 cut(s) | 32, 514, 541, 1714, 1993, 2087, 2101 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 290 |
| AspLEI | GCGC | 2 cut(s) | 251, 1814 |
| AsuC2I | CCSGG | 2 cut(s) | 2552, 2632 |
| AsuHPI | GGTGA | 4 cut(s) | 1786, 2474, 2548, 2822 |
| AvaI | CYCGRG | 1 cut(s) | 1380 |
| AxyI | CCTNAGG | 2 cut(s) | 366, 2835 |
| BaeGI | GKGCMC | 1 cut(s) | 577 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2258, 2291 |
| BalI | TGGCCA | 3 cut(s) | 99, 345, 1857 |
| BamHI | GGATCC | 1 cut(s) | 606 |
| BanII | GRGCYC | 2 cut(s) | 682, 2044 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1065, 1097 |
| BbrPI | CACGTG | 1 cut(s) | 2272 |
| BbsI | GAAGAC | 1 cut(s) | 2756 |
| Bbv12I | GWGCWC | 3 cut(s) | 577, 2044, 2790 |
| BbvI | GCAGC | 6 cut(s) | 183, 638, 1198, 1566, 2014, 2105 |
| BccI | CCATC | 5 cut(s) | 153, 2409, 2428, 2506, 2730 |
| BciT130I | CCWGG | 3 cut(s) | 1514, 1990, 2235 |
| BciVI | GTATCC | 2 cut(s) | 218, 891 |
| BclI | TGATCA | 3 cut(s) | 1038, 1341, 1819 |
| BcnI | CCSGG | 2 cut(s) | 2552, 2632 |
| BcoDI | GTCTC | 3 cut(s) | 306, 325, 2447 |
| BcuI | ACTAGT | 1 cut(s) | 1528 |
| BfaI | CTAG | 8 cut(s) | 500, 618, 984, 1529, 2147, 2177, 2327, 2872 |
| BfmI | CTRYAG | 4 cut(s) | 111, 1233, 1580, 2280 |
| BfuAI | ACCTGC | 1 cut(s) | 979 |
| BfuI | GTATCC | 2 cut(s) | 218, 891 |
| BglII | AGATCT | 1 cut(s) | 1954 |
| BisI | GCNGC | 6 cut(s) | 172, 652, 1187, 1580, 2028, 2094 |
| BlsI | GCNGC | 6 cut(s) | 173, 653, 1188, 1581, 2029, 2095 |
| BmcAI | AGTACT | 1 cut(s) | 1083 |
| Bme1390I | CCNGG | 5 cut(s) | 1514, 1990, 2235, 2552, 2632 |
| BmeT110I | CYCGRG | 1 cut(s) | 1380 |
| BmiI | GGNNCC | 3 cut(s) | 608, 800, 1048 |
| BmrFI | CCNGG | 5 cut(s) | 1514, 1990, 2235, 2552, 2632 |
| BmsI | GCATC | 8 cut(s) | 68, 175, 361, 985, 1296, 1926, 1993, 2351 |
| BoxI | GACNNNNGTC | 1 cut(s) | 264 |
| BpiI | GAAGAC | 1 cut(s) | 2756 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 299, 331, 1090, 1122 |
| BpuEI | CTTGAG | 2 cut(s) | 1578, 2553 |
| BpuMI | CCSGG | 2 cut(s) | 2552, 2632 |
| BsaAI | YACGTR | 1 cut(s) | 2272 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2740 |
| BsaJI | CCNNGG | 4 cut(s) | 94, 802, 1116, 1192 |
| BsaWI | WCCGGW | 1 cut(s) | 2481 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 324 |
| Bse118I | RCCGGY | 1 cut(s) | 2058 |
| Bse1I | ACTGG | 2 cut(s) | 1366, 2464 |
| Bse21I | CCTNAGG | 2 cut(s) | 366, 2835 |
| Bse3DI | GCAATG | 5 cut(s) | 78, 2013, 2683, 2820, 2866 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2740 |
| BseBI | CCWGG | 3 cut(s) | 1514, 1990, 2235 |
| BseDI | CCNNGG | 4 cut(s) | 94, 802, 1116, 1192 |
| BseJI | GATNNNNATC | 1 cut(s) | 2740 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 324 |
| BseMI | GCAATG | 5 cut(s) | 78, 2013, 2683, 2820, 2866 |
| BseMII | CTCAG | 5 cut(s) | 297, 579, 2408, 2766, 2826 |
| BseNI | ACTGG | 2 cut(s) | 1366, 2464 |
| BseRI | GAGGAG | 2 cut(s) | 1213, 2345 |
| BseSI | GKGCMC | 1 cut(s) | 577 |
| BseXI | GCAGC | 6 cut(s) | 183, 638, 1198, 1566, 2014, 2105 |
| BseYI | CCCAGC | 1 cut(s) | 1970 |
| Bsh1236I | CGCG | 2 cut(s) | 251, 2070 |
| BshFI | GGCC | 7 cut(s) | 99, 345, 1161, 1473, 1857, 1988, 2547 |
| BsiHKAI | GWGCWC | 3 cut(s) | 577, 2044, 2790 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1380 |
| BsiSI | CCGG | 5 cut(s) | 193, 2059, 2482, 2551, 2631 |
| BslFI | GGGAC | 1 cut(s) | 2695 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 324 |
| BsmAI | GTCTC | 3 cut(s) | 306, 325, 2447 |
| BsmBI | CGTCTC | 1 cut(s) | 325 |
| BsmFI | GGGAC | 1 cut(s) | 2695 |
| BsmI | GAATGC | 3 cut(s) | 1246, 1349, 1735 |
| BsnI | GGCC | 7 cut(s) | 99, 345, 1161, 1473, 1857, 1988, 2547 |
| BsoBI | CYCGRG | 1 cut(s) | 1380 |
| Bsp1286I | GDGCHC | 4 cut(s) | 577, 682, 2044, 2790 |
| Bsp1407I | TGTACA | 1 cut(s) | 558 |
| Bsp19I | CCATGG | 3 cut(s) | 94, 802, 1192 |
| Bsp68I | TCGCGA | 1 cut(s) | 2070 |
| BspACI | CCGC | 1 cut(s) | 2687 |
| BspANI | GGCC | 7 cut(s) | 99, 345, 1161, 1473, 1857, 1988, 2547 |
| BspCNI | CTCAG | 5 cut(s) | 298, 580, 2407, 2765, 2827 |
| BspFNI | CGCG | 2 cut(s) | 251, 2070 |
| BspHI | TCATGA | 1 cut(s) | 1632 |
| BspLI | GGNNCC | 3 cut(s) | 608, 800, 1048 |
| BspMAI | CTGCAG | 1 cut(s) | 1584 |
| BspMI | ACCTGC | 1 cut(s) | 979 |
| BspPI | GGATC | 5 cut(s) | 67, 601, 614, 1529, 2480 |
| BspQI | GCTCTTC | 2 cut(s) | 489, 2049 |
| BsrDI | GCAATG | 5 cut(s) | 78, 2013, 2683, 2820, 2866 |
| BsrFI | RCCGGY | 1 cut(s) | 2058 |
| BsrGI | TGTACA | 1 cut(s) | 558 |
| BsrI | ACTGG | 2 cut(s) | 1366, 2464 |
| BssAI | RCCGGY | 1 cut(s) | 2058 |
| BssECI | CCNNGG | 4 cut(s) | 94, 802, 1116, 1192 |
| BssNAI | GTATAC | 2 cut(s) | 860, 1485 |
| BssT1I | CCWWGG | 4 cut(s) | 94, 802, 1116, 1192 |
| Bst1107I | GTATAC | 2 cut(s) | 860, 1485 |
| Bst2UI | CCWGG | 3 cut(s) | 1514, 1990, 2235 |
| Bst4CI | ACNGT | 6 cut(s) | 638, 972, 1086, 1141, 2281, 2408 |
| Bst6I | CTCTTC | 2 cut(s) | 489, 2049 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 2090, 2645 |
| BstAUI | TGTACA | 1 cut(s) | 558 |
| BstBAI | YACGTR | 1 cut(s) | 2272 |
| BstC8I | GCNNGC | 8 cut(s) | 190, 891, 1170, 1288, 1311, 2056, 2060, 2418 |
| BstDEI | CTNAG | 9 cut(s) | 65, 306, 366, 588, 776, 842, 2394, 2752, 2835 |
| BstDSI | CCRYGG | 3 cut(s) | 94, 802, 1192 |
| BstEII | GGTNACC | 1 cut(s) | 2554 |
| BstFNI | CGCG | 2 cut(s) | 251, 2070 |
| BstHHI | GCGC | 2 cut(s) | 251, 1814 |
| BstMAI | GTCTC | 3 cut(s) | 306, 325, 2447 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1060, 1292, 1559, 1739, 1748, 2017, 2090, 2645 |
| BstNI | CCWGG | 3 cut(s) | 1514, 1990, 2235 |
| BstNSI | RCATGY | 8 cut(s) | 19, 559, 852, 893, 1172, 1932, 2502, 2506 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 264 |
| BstPI | GGTNACC | 1 cut(s) | 2554 |
| BstSCI | CCNGG | 5 cut(s) | 1512, 1988, 2233, 2550, 2630 |
| BstSFI | CTRYAG | 4 cut(s) | 111, 1233, 1580, 2280 |
| BstSLI | GKGCMC | 1 cut(s) | 577 |
| BstUI | CGCG | 2 cut(s) | 251, 2070 |
| BstV1I | GCAGC | 6 cut(s) | 183, 638, 1198, 1566, 2014, 2105 |
| BstV2I | GAAGAC | 1 cut(s) | 2756 |
| BstX2I | RGATCY | 3 cut(s) | 606, 1954, 2472 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2736 |
| BstYI | RGATCY | 3 cut(s) | 606, 1954, 2472 |
| BstZ17I | GTATAC | 2 cut(s) | 860, 1485 |
| Bsu36I | CCTNAGG | 2 cut(s) | 366, 2835 |
| BsuI | GTATCC | 2 cut(s) | 218, 891 |
| BsuRI | GGCC | 7 cut(s) | 99, 345, 1161, 1473, 1857, 1988, 2547 |
| BtgI | CCRYGG | 3 cut(s) | 94, 802, 1192 |
| BtgZI | GCGATG | 1 cut(s) | 2051 |
| BtsI | GCAGTG | 2 cut(s) | 575, 2655 |
| BtsIMutI | CAGTG | 8 cut(s) | 575, 1048, 1275, 1549, 2277, 2402, 2413, 2655 |
| BtuMI | TCGCGA | 1 cut(s) | 2070 |
| BveI | ACCTGC | 1 cut(s) | 979 |
| Cac8I | GCNNGC | 8 cut(s) | 190, 891, 1170, 1288, 1311, 2056, 2060, 2418 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1548 |
| CciI | TCATGA | 1 cut(s) | 1632 |
| CfoI | GCGC | 2 cut(s) | 251, 1814 |
| Cfr10I | RCCGGY | 1 cut(s) | 2058 |
| Csp6I | GTAC | 3 cut(s) | 559, 1082, 2267 |
| CviQI | GTAC | 3 cut(s) | 559, 1082, 2267 |
| DdeI | CTNAG | 9 cut(s) | 65, 306, 366, 588, 776, 842, 2394, 2752, 2835 |
| EaeI | YGGCCR | 3 cut(s) | 97, 343, 1855 |
| Eam1104I | CTCTTC | 2 cut(s) | 489, 2049 |
| EarI | CTCTTC | 2 cut(s) | 489, 2049 |
| Ecl136II | GAGCTC | 1 cut(s) | 2042 |
| Eco130I | CCWWGG | 4 cut(s) | 94, 802, 1116, 1192 |
| Eco147I | AGGCCT | 2 cut(s) | 1473, 2547 |
| Eco24I | GRGCYC | 2 cut(s) | 682, 2044 |
| Eco32I | GATATC | 1 cut(s) | 2742 |
| Eco53kI | GAGCTC | 1 cut(s) | 2042 |
| Eco57I | CTGAAG | 6 cut(s) | 122, 187, 470, 1876, 1926, 2000 |
| Eco72I | CACGTG | 1 cut(s) | 2272 |
| Eco81I | CCTNAGG | 2 cut(s) | 366, 2835 |
| Eco88I | CYCGRG | 1 cut(s) | 1380 |
| Eco91I | GGTNACC | 1 cut(s) | 2554 |
| EcoICRI | GAGCTC | 1 cut(s) | 2042 |
| EcoO65I | GGTNACC | 1 cut(s) | 2554 |
| EcoRII | CCWGG | 3 cut(s) | 1512, 1988, 2233 |
| EcoRV | GATATC | 1 cut(s) | 2742 |
| EcoT14I | CCWWGG | 4 cut(s) | 94, 802, 1116, 1192 |
| EcoT22I | ATGCAT | 2 cut(s) | 2504, 2538 |
| EcoT38I | GRGCYC | 2 cut(s) | 682, 2044 |
| ErhI | CCWWGG | 4 cut(s) | 94, 802, 1116, 1192 |
| Esp3I | CGTCTC | 1 cut(s) | 325 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1458, 1490 |
| FaqI | GGGAC | 1 cut(s) | 2695 |
| FauNDI | CATATG | 2 cut(s) | 156, 687 |
| FbaI | TGATCA | 3 cut(s) | 1038, 1341, 1819 |
| FblI | GTMKAC | 3 cut(s) | 258, 859, 1484 |
| Fnu4HI | GCNGC | 6 cut(s) | 172, 652, 1187, 1580, 2028, 2094 |
| FriOI | GRGCYC | 2 cut(s) | 682, 2044 |
| Fsp4HI | GCNGC | 6 cut(s) | 172, 652, 1187, 1580, 2028, 2094 |
| FspBI | CTAG | 8 cut(s) | 500, 618, 984, 1529, 2147, 2177, 2327, 2872 |
| FspI | TGCGCA | 1 cut(s) | 1813 |
| GlaI | GCGC | 2 cut(s) | 250, 1813 |
| GluI | GCNGC | 6 cut(s) | 172, 652, 1187, 1580, 2028, 2094 |
| GsaI | CCCAGC | 1 cut(s) | 1974 |
| HaeIII | GGCC | 7 cut(s) | 99, 345, 1161, 1473, 1857, 1988, 2547 |
| HapII | CCGG | 5 cut(s) | 193, 2059, 2482, 2551, 2631 |
| HhaI | GCGC | 2 cut(s) | 251, 1814 |
| Hin6I | GCGC | 2 cut(s) | 249, 1812 |
| HinP1I | GCGC | 2 cut(s) | 249, 1812 |
| HincII | GTYRAC | 1 cut(s) | 1510 |
| HindII | GTYRAC | 1 cut(s) | 1510 |
| HindIII | AAGCTT | 4 cut(s) | 51, 1074, 2181, 2414 |
| HpaI | GTTAAC | 1 cut(s) | 1510 |
| HpaII | CCGG | 5 cut(s) | 193, 2059, 2482, 2551, 2631 |
| HphI | GGTGA | 4 cut(s) | 1786, 2474, 2548, 2822 |
| Hpy188I | TCNGA | 6 cut(s) | 141, 674, 897, 2164, 2722, 2845 |
| Hpy188III | TCNNGA | 7 cut(s) | 869, 1380, 1633, 1659, 2069, 2341, 2493 |
| HpyCH4III | ACNGT | 6 cut(s) | 638, 972, 1086, 1141, 2281, 2408 |
| HpyCH4IV | ACGT | 4 cut(s) | 709, 2271, 2313, 2658 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1060, 1292, 1559, 1739, 1748, 2017, 2090, 2645 |
| HpyF3I | CTNAG | 9 cut(s) | 65, 306, 366, 588, 776, 842, 2394, 2752, 2835 |
| HpySE526I | ACGT | 4 cut(s) | 709, 2271, 2313, 2658 |
| HspAI | GCGC | 2 cut(s) | 249, 1812 |
| KroI | GCCGGC | 1 cut(s) | 2058 |
| KroNI | GCCGGC | 1 cut(s) | 2060 |
| Ksp22I | TGATCA | 3 cut(s) | 1038, 1341, 1819 |
| KspAI | GTTAAC | 1 cut(s) | 1510 |
| LguI | GCTCTTC | 2 cut(s) | 489, 2049 |
| LmnI | GCTCC | 5 cut(s) | 1046, 1183, 1194, 2039, 2449 |
| Lsp1109I | GCAGC | 6 cut(s) | 183, 638, 1198, 1566, 2014, 2105 |
| LweI | GCATC | 8 cut(s) | 68, 175, 361, 985, 1296, 1926, 1993, 2351 |
| MaeI | CTAG | 8 cut(s) | 500, 618, 984, 1529, 2147, 2177, 2327, 2872 |
| MaeII | ACGT | 4 cut(s) | 709, 2271, 2313, 2658 |
| MaeIII | GTNAC | 8 cut(s) | 24, 266, 467, 1249, 1531, 1870, 1974, 2554 |
| MfeI | CAATTG | 2 cut(s) | 20, 2615 |
| MflI | RGATCY | 3 cut(s) | 606, 1954, 2472 |
| MhlI | GDGCHC | 4 cut(s) | 577, 682, 2044, 2790 |
| MlsI | TGGCCA | 3 cut(s) | 99, 345, 1857 |
| MluNI | TGGCCA | 3 cut(s) | 99, 345, 1857 |
| MlyI | GAGTC | 5 cut(s) | 116, 308, 781, 2498, 2834 |
| MmeI | TCCRAC | 5 cut(s) | 212, 235, 611, 1403, 2399 |
| Mox20I | TGGCCA | 3 cut(s) | 99, 345, 1857 |
| Mph1103I | ATGCAT | 2 cut(s) | 2504, 2538 |
| MroNI | GCCGGC | 1 cut(s) | 2058 |
| MroXI | GAANNNNTTC | 1 cut(s) | 290 |
| MscI | TGGCCA | 3 cut(s) | 99, 345, 1857 |
| MslI | CAYNNNNRTG | 7 cut(s) | 219, 698, 888, 1167, 2406, 2503, 2707 |
| Msp20I | TGGCCA | 3 cut(s) | 99, 345, 1857 |
| MspI | CCGG | 5 cut(s) | 193, 2059, 2482, 2551, 2631 |
| MspR9I | CCNGG | 5 cut(s) | 1514, 1990, 2235, 2552, 2632 |
| MunI | CAATTG | 2 cut(s) | 20, 2615 |
| Mva1269I | GAATGC | 3 cut(s) | 1246, 1349, 1735 |
| MvaI | CCWGG | 3 cut(s) | 1514, 1990, 2235 |
| MvnI | CGCG | 2 cut(s) | 251, 2070 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1060, 1292, 1559, 1739, 1748, 2017, 2090, 2645 |
| NaeI | GCCGGC | 1 cut(s) | 2060 |
| NciI | CCSGG | 2 cut(s) | 2552, 2632 |
| NcoI | CCATGG | 3 cut(s) | 94, 802, 1192 |
| NdeI | CATATG | 2 cut(s) | 156, 687 |
| NgoMIV | GCCGGC | 1 cut(s) | 2058 |
| NlaIV | GGNNCC | 3 cut(s) | 608, 800, 1048 |
| NmuCI | GTSAC | 4 cut(s) | 24, 266, 467, 2554 |
| NruI | TCGCGA | 1 cut(s) | 2070 |
| NsbI | TGCGCA | 1 cut(s) | 1813 |
| NsiI | ATGCAT | 2 cut(s) | 2504, 2538 |
| NspI | RCATGY | 8 cut(s) | 19, 559, 852, 893, 1172, 1932, 2502, 2506 |
| OliI | CACNNNNGTG | 1 cut(s) | 2707 |
| PaeI | GCATGC | 2 cut(s) | 893, 1172 |
| PagI | TCATGA | 1 cut(s) | 1632 |
| PaqCI | CACCTGC | 1 cut(s) | 979 |
| PceI | AGGCCT | 2 cut(s) | 1473, 2547 |
| PciI | ACATGT | 2 cut(s) | 555, 1928 |
| PciSI | GCTCTTC | 2 cut(s) | 489, 2049 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 901 |
| PctI | GAATGC | 3 cut(s) | 1246, 1349, 1735 |
| PdiI | GCCGGC | 1 cut(s) | 2060 |
| PdmI | GAANNNNTTC | 1 cut(s) | 290 |
| PfeI | GAWTC | 5 cut(s) | 41, 1697, 2126, 2800, 2846 |
| PflFI | GACNNNGTC | 1 cut(s) | 317 |
| PfoI | TCCNGGA | 1 cut(s) | 2233 |
| PkrI | GCNGC | 6 cut(s) | 173, 653, 1188, 1581, 2029, 2095 |
| PleI | GAGTC | 5 cut(s) | 116, 308, 780, 2497, 2834 |
| PmaCI | CACGTG | 1 cut(s) | 2272 |
| PmlI | CACGTG | 1 cut(s) | 2272 |
| PpsI | GAGTC | 5 cut(s) | 116, 308, 780, 2497, 2834 |
| Ppu21I | YACGTR | 1 cut(s) | 2272 |
| PscI | ACATGT | 2 cut(s) | 555, 1928 |
| PshAI | GACNNNNGTC | 1 cut(s) | 264 |
| PsiI | TTATAA | 1 cut(s) | 2076 |
| Psp124BI | GAGCTC | 1 cut(s) | 2044 |
| Psp6I | CCWGG | 3 cut(s) | 1512, 1988, 2233 |
| PspCI | CACGTG | 1 cut(s) | 2272 |
| PspEI | GGTNACC | 1 cut(s) | 2554 |
| PspFI | CCCAGC | 1 cut(s) | 1970 |
| PspGI | CCWGG | 3 cut(s) | 1512, 1988, 2233 |
| PspN4I | GGNNCC | 3 cut(s) | 608, 800, 1048 |
| PstI | CTGCAG | 1 cut(s) | 1584 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1548 |
| PsuI | RGATCY | 3 cut(s) | 606, 1954, 2472 |
| PsyI | GACNNNGTC | 1 cut(s) | 317 |
| RruI | TCGCGA | 1 cut(s) | 2070 |
| RsaI | GTAC | 3 cut(s) | 560, 1083, 2268 |
| RsaNI | GTAC | 3 cut(s) | 559, 1082, 2267 |
| RseI | CAYNNNNRTG | 7 cut(s) | 219, 698, 888, 1167, 2406, 2503, 2707 |
| SacI | GAGCTC | 1 cut(s) | 2044 |
| SapI | GCTCTTC | 2 cut(s) | 489, 2049 |
| SatI | GCNGC | 6 cut(s) | 172, 652, 1187, 1580, 2028, 2094 |
| ScaI | AGTACT | 1 cut(s) | 1083 |
| SchI | GAGTC | 5 cut(s) | 116, 308, 781, 2498, 2834 |
| ScrFI | CCNGG | 5 cut(s) | 1514, 1990, 2235, 2552, 2632 |
| SduI | GDGCHC | 4 cut(s) | 577, 682, 2044, 2790 |
| SfaNI | GCATC | 8 cut(s) | 68, 175, 361, 985, 1296, 1926, 1993, 2351 |
| SfcI | CTRYAG | 4 cut(s) | 111, 1233, 1580, 2280 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 219, 698, 888, 1167, 2406, 2503, 2707 |
| SmlI | CTYRAG | 2 cut(s) | 1593, 2568 |
| SmoI | CTYRAG | 2 cut(s) | 1593, 2568 |
| SpeI | ACTAGT | 1 cut(s) | 1528 |
| SphI | GCATGC | 2 cut(s) | 893, 1172 |
| SseBI | AGGCCT | 2 cut(s) | 1473, 2547 |
| SsiI | CCGC | 1 cut(s) | 2687 |
| SspI | AATATT | 1 cut(s) | 1566 |
| SspMI | CTAG | 8 cut(s) | 500, 618, 984, 1529, 2147, 2177, 2327, 2872 |
| SstI | GAGCTC | 1 cut(s) | 2044 |
| StuI | AGGCCT | 2 cut(s) | 1473, 2547 |
| StyD4I | CCNGG | 5 cut(s) | 1512, 1988, 2233, 2550, 2630 |
| StyI | CCWWGG | 4 cut(s) | 94, 802, 1116, 1192 |
| TaaI | ACNGT | 6 cut(s) | 638, 972, 1086, 1141, 2281, 2408 |
| TaiI | ACGT | 4 cut(s) | 712, 2274, 2316, 2661 |
| TaqI | TCGA | 2 cut(s) | 71, 1779 |
| TatI | WGTACW | 2 cut(s) | 558, 1081 |
| TfiI | GAWTC | 5 cut(s) | 41, 1697, 2126, 2800, 2846 |
| TscAI | CASTG | 8 cut(s) | 582, 1048, 1282, 1549, 2284, 2402, 2413, 2655 |
| TseFI | GTSAC | 4 cut(s) | 24, 266, 467, 2554 |
| TseI | GCWGC | 6 cut(s) | 171, 651, 1186, 1579, 2027, 2093 |
| Tsp45I | GTSAC | 4 cut(s) | 24, 266, 467, 2554 |
| TspGWI | ACGGA | 2 cut(s) | 307, 893 |
| TspRI | CASTG | 8 cut(s) | 582, 1048, 1282, 1549, 2284, 2402, 2413, 2655 |
| Tth111I | GACNNNGTC | 1 cut(s) | 317 |
| VneI | GTGCAC | 1 cut(s) | 573 |
| XapI | RAATTY | 7 cut(s) | 32, 514, 541, 1714, 1993, 2087, 2101 |
| XceI | RCATGY | 8 cut(s) | 19, 559, 852, 893, 1172, 1932, 2502, 2506 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 353, 2675 |
| XmiI | GTMKAC | 3 cut(s) | 258, 859, 1484 |
| XmnI | GAANNNNTTC | 1 cut(s) | 290 |
| XspI | CTAG | 8 cut(s) | 500, 618, 984, 1529, 2147, 2177, 2327, 2872 |
| ZrmI | AGTACT | 1 cut(s) | 1083 |
| Zsp2I | ATGCAT | 2 cut(s) | 2504, 2538 |