iq-domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G22190 AT3G22190 AT3G22190 AT3G22190 |
| fragaria_vesca | FvH4_3g26200 |
| malus_domestica | MD03G1158100.v1.1 MD11G1174600.v1.1 |
| prunus_persica | Prupe.6G146700_v2.0.a1 Prupe.6G146700_v2.0.a1 Prupe.6G146700_v2.0.a1 Prupe.6G146700_v2.0.a1 Prupe.6G146700_v2.0.a1 Prupe.6G146700_v2.0.a1 |
| pyrus_communis | pycom03g11120 pycom11g14930 |
| rosa_chinensis | RchiOBHm_Chr5g0048991 |
| rosa_laevigata | RLG00000034576 |
| rosa_multiflora | Rmu_sc0004058.1_g000010 |
| rosa_roxburghii | Rroxscaffold_1G00032910 |
| rosa_rugosa | Rorug05G0241700 |
| rosa_samantha | Rh5AG321900 Rh5BG332200 Rh5CG357400 Rh5DG344000 |
| rosa_wichuraiana | Rw5G030380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 182 |
| AccBSI | CCGCTC | 1 cut(s) | 265 |
| AccII | CGCG | 1 cut(s) | 468 |
| AciI | CCGC | 5 cut(s) | 265, 778, 849, 974, 1135 |
| AclWI | GGATC | 5 cut(s) | 583, 685, 1031, 1074, 1098 |
| AcsI | RAATTY | 4 cut(s) | 121, 144, 588, 1054 |
| AcuI | CTGAAG | 2 cut(s) | 51, 494 |
| AfaI | GTAC | 4 cut(s) | 196, 246, 255, 1213 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 182, 315, 769 |
| AjnI | CCWGG | 3 cut(s) | 767, 1063, 1216 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 294, 326 |
| Alw21I | GWGCWC | 1 cut(s) | 337 |
| Alw26I | GTCTC | 3 cut(s) | 13, 1146, 1294 |
| AlwI | GGATC | 5 cut(s) | 583, 685, 1031, 1074, 1098 |
| Ama87I | CYCGRG | 1 cut(s) | 450 |
| AoxI | GGCC | 2 cut(s) | 382, 881 |
| ApeKI | GCWGC | 6 cut(s) | 287, 404, 620, 623, 688, 723 |
| ApoI | RAATTY | 4 cut(s) | 121, 144, 588, 1054 |
| AseI | ATTAAT | 1 cut(s) | 792 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 121 |
| AspLEI | GCGC | 1 cut(s) | 468 |
| AspS9I | GGNCC | 2 cut(s) | 882, 929 |
| AsuHPI | GGTGA | 2 cut(s) | 216, 951 |
| AsuII | TTCGAA | 1 cut(s) | 708 |
| AvaI | CYCGRG | 1 cut(s) | 450 |
| AvaII | GGWCC | 1 cut(s) | 929 |
| BanII | GRGCYC | 1 cut(s) | 337 |
| BbsI | GAAGAC | 1 cut(s) | 57 |
| Bbv12I | GWGCWC | 1 cut(s) | 337 |
| BbvI | GCAGC | 6 cut(s) | 274, 391, 607, 635, 700, 735 |
| BccI | CCATC | 6 cut(s) | 552, 744, 748, 797, 938, 1241 |
| BciT130I | CCWGG | 3 cut(s) | 769, 1065, 1218 |
| BcoDI | GTCTC | 3 cut(s) | 13, 1146, 1294 |
| BfaI | CTAG | 6 cut(s) | 141, 327, 374, 785, 963, 1242 |
| BfmI | CTRYAG | 1 cut(s) | 621 |
| BglII | AGATCT | 1 cut(s) | 1196 |
| BisI | GCNGC | 7 cut(s) | 288, 405, 621, 624, 689, 724, 1136 |
| BlpI | GCTNAGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 7 cut(s) | 289, 406, 622, 625, 690, 725, 1137 |
| BmcAI | AGTACT | 1 cut(s) | 196 |
| Bme1390I | CCNGG | 3 cut(s) | 769, 1065, 1218 |
| Bme18I | GGWCC | 1 cut(s) | 929 |
| BmeT110I | CYCGRG | 1 cut(s) | 450 |
| BmgT120I | GGNCC | 2 cut(s) | 882, 929 |
| BmiI | GGNNCC | 2 cut(s) | 884, 931 |
| BmrFI | CCNGG | 3 cut(s) | 769, 1065, 1218 |
| BmrI | ACTGGG | 2 cut(s) | 853, 1248 |
| BmsI | GCATC | 5 cut(s) | 151, 157, 306, 998, 1294 |
| BmuI | ACTGGG | 2 cut(s) | 853, 1248 |
| BpiI | GAAGAC | 1 cut(s) | 57 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 122, 154 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 627 |
| Bpu14I | TTCGAA | 1 cut(s) | 708 |
| BsaBI | GATNNNNATC | 1 cut(s) | 792 |
| BsaJI | CCNNGG | 3 cut(s) | 642, 767, 768 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 798, 828 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 182, 315, 769 |
| Bse1I | ACTGG | 7 cut(s) | 179, 192, 692, 743, 859, 1040, 1254 |
| Bse3DI | GCAATG | 1 cut(s) | 474 |
| Bse8I | GATNNNNATC | 1 cut(s) | 792 |
| BseBI | CCWGG | 3 cut(s) | 769, 1065, 1218 |
| BseDI | CCNNGG | 3 cut(s) | 642, 767, 768 |
| BseGI | GGATG | 6 cut(s) | 297, 563, 759, 808, 989, 1186 |
| BseJI | GATNNNNATC | 1 cut(s) | 792 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 182, 315, 769 |
| BseMI | GCAATG | 1 cut(s) | 474 |
| BseMII | CTCAG | 1 cut(s) | 1238 |
| BseNI | ACTGG | 7 cut(s) | 179, 192, 692, 743, 859, 1040, 1254 |
| BseRI | GAGGAG | 1 cut(s) | 162 |
| BseXI | GCAGC | 6 cut(s) | 274, 391, 607, 635, 700, 735 |
| BseYI | CCCAGC | 1 cut(s) | 726 |
| Bsh1236I | CGCG | 1 cut(s) | 468 |
| BshFI | GGCC | 2 cut(s) | 384, 883 |
| BsiHKAI | GWGCWC | 1 cut(s) | 337 |
| BsiHKCI | CYCGRG | 1 cut(s) | 450 |
| BslFI | GGGAC | 3 cut(s) | 750, 915, 1280 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 182, 315, 769 |
| BsmAI | GTCTC | 3 cut(s) | 13, 1146, 1294 |
| BsmFI | GGGAC | 3 cut(s) | 750, 915, 1280 |
| BsnI | GGCC | 2 cut(s) | 384, 883 |
| BsoBI | CYCGRG | 1 cut(s) | 450 |
| Bsp119I | TTCGAA | 1 cut(s) | 708 |
| Bsp1286I | GDGCHC | 1 cut(s) | 337 |
| Bsp1407I | TGTACA | 1 cut(s) | 253 |
| Bsp143I | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 627 |
| Bsp19I | CCATGG | 1 cut(s) | 642 |
| BspACI | CCGC | 5 cut(s) | 265, 778, 849, 974, 1135 |
| BspANI | GGCC | 2 cut(s) | 384, 883 |
| BspCNI | CTCAG | 1 cut(s) | 1237 |
| BspFNI | CGCG | 1 cut(s) | 468 |
| BspLI | GGNNCC | 2 cut(s) | 884, 931 |
| BspMAI | CTGCAG | 1 cut(s) | 625 |
| BspPI | GGATC | 5 cut(s) | 583, 685, 1031, 1074, 1098 |
| BspQI | GCTCTTC | 2 cut(s) | 325, 342 |
| BspT104I | TTCGAA | 1 cut(s) | 708 |
| BsrBI | CCGCTC | 1 cut(s) | 265 |
| BsrDI | GCAATG | 1 cut(s) | 474 |
| BsrGI | TGTACA | 1 cut(s) | 253 |
| BsrI | ACTGG | 7 cut(s) | 179, 192, 692, 743, 859, 1040, 1254 |
| BssECI | CCNNGG | 3 cut(s) | 642, 767, 768 |
| BssMI | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| BssT1I | CCWWGG | 1 cut(s) | 642 |
| Bst2UI | CCWGG | 3 cut(s) | 769, 1065, 1218 |
| Bst4CI | ACNGT | 4 cut(s) | 63, 217, 496, 569 |
| Bst6I | CTCTTC | 5 cut(s) | 325, 342, 420, 602, 1255 |
| BstAUI | TGTACA | 1 cut(s) | 253 |
| BstBI | TTCGAA | 1 cut(s) | 708 |
| BstC8I | GCNNGC | 6 cut(s) | 429, 459, 672, 874, 976, 1010 |
| BstDEI | CTNAG | 3 cut(s) | 627, 797, 1224 |
| BstDSI | CCRYGG | 1 cut(s) | 642 |
| BstEII | GGTNACC | 1 cut(s) | 1169 |
| BstF5I | GGATG | 6 cut(s) | 297, 563, 759, 808, 989, 1186 |
| BstFNI | CGCG | 1 cut(s) | 468 |
| BstHHI | GCGC | 1 cut(s) | 468 |
| BstKTI | GATC | 7 cut(s) | 578, 680, 1039, 1082, 1106, 1199, 1247 |
| BstMAI | GTCTC | 3 cut(s) | 13, 1146, 1294 |
| BstMBI | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 332, 341, 463, 530, 1144, 1304 |
| BstNI | CCWGG | 3 cut(s) | 769, 1065, 1218 |
| BstNSI | RCATGY | 1 cut(s) | 982 |
| BstPI | GGTNACC | 1 cut(s) | 1169 |
| BstSCI | CCNGG | 3 cut(s) | 767, 1063, 1216 |
| BstSFI | CTRYAG | 1 cut(s) | 621 |
| BstUI | CGCG | 1 cut(s) | 468 |
| BstV1I | GCAGC | 6 cut(s) | 274, 391, 607, 635, 700, 735 |
| BstV2I | GAAGAC | 1 cut(s) | 57 |
| BstX2I | RGATCY | 5 cut(s) | 575, 1036, 1079, 1103, 1196 |
| BstYI | RGATCY | 5 cut(s) | 575, 1036, 1079, 1103, 1196 |
| BsuRI | GGCC | 2 cut(s) | 384, 883 |
| BtgI | CCRYGG | 1 cut(s) | 642 |
| BtsCI | GGATG | 6 cut(s) | 297, 563, 759, 808, 989, 1186 |
| BtsIMutI | CAGTG | 3 cut(s) | 574, 671, 1261 |
| Cac8I | GCNNGC | 6 cut(s) | 429, 459, 672, 874, 976, 1010 |
| CfoI | GCGC | 1 cut(s) | 468 |
| Cfr13I | GGNCC | 2 cut(s) | 882, 929 |
| CsiI | ACCWGGT | 1 cut(s) | 1063 |
| Csp6I | GTAC | 4 cut(s) | 195, 245, 254, 1212 |
| CviAII | CATG | 6 cut(s) | 248, 386, 536, 643, 818, 979 |
| CviQI | GTAC | 4 cut(s) | 195, 245, 254, 1212 |
| DdeI | CTNAG | 3 cut(s) | 627, 797, 1224 |
| DpnI | GATC | 7 cut(s) | 577, 679, 1038, 1081, 1105, 1198, 1246 |
| DpnII | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| DraI | TTTAAA | 1 cut(s) | 348 |
| Eam1104I | CTCTTC | 5 cut(s) | 325, 342, 420, 602, 1255 |
| EarI | CTCTTC | 5 cut(s) | 325, 342, 420, 602, 1255 |
| Ecl136II | GAGCTC | 1 cut(s) | 335 |
| Eco130I | CCWWGG | 1 cut(s) | 642 |
| Eco24I | GRGCYC | 1 cut(s) | 337 |
| Eco47I | GGWCC | 1 cut(s) | 929 |
| Eco53kI | GAGCTC | 1 cut(s) | 335 |
| Eco57I | CTGAAG | 2 cut(s) | 51, 494 |
| Eco88I | CYCGRG | 1 cut(s) | 450 |
| Eco91I | GGTNACC | 1 cut(s) | 1169 |
| EcoICRI | GAGCTC | 1 cut(s) | 335 |
| EcoO109I | RGGNCCY | 1 cut(s) | 882 |
| EcoO65I | GGTNACC | 1 cut(s) | 1169 |
| EcoRI | GAATTC | 2 cut(s) | 121, 144 |
| EcoRII | CCWGG | 3 cut(s) | 767, 1063, 1216 |
| EcoT14I | CCWWGG | 1 cut(s) | 642 |
| EcoT38I | GRGCYC | 1 cut(s) | 337 |
| ErhI | CCWWGG | 1 cut(s) | 642 |
| FaeI | CATG | 6 cut(s) | 251, 389, 539, 646, 821, 982 |
| FaqI | GGGAC | 3 cut(s) | 750, 915, 1280 |
| FatI | CATG | 6 cut(s) | 247, 385, 535, 642, 817, 978 |
| FauI | CCCGC | 1 cut(s) | 967 |
| FauNDI | CATATG | 1 cut(s) | 649 |
| Fnu4HI | GCNGC | 7 cut(s) | 288, 405, 621, 624, 689, 724, 1136 |
| FokI | GGATG | 6 cut(s) | 284, 570, 766, 815, 976, 1173 |
| FriOI | GRGCYC | 1 cut(s) | 337 |
| Fsp4HI | GCNGC | 7 cut(s) | 288, 405, 621, 624, 689, 724, 1136 |
| FspBI | CTAG | 6 cut(s) | 141, 327, 374, 785, 963, 1242 |
| GlaI | GCGC | 1 cut(s) | 467 |
| GluI | GCNGC | 7 cut(s) | 288, 405, 621, 624, 689, 724, 1136 |
| GsaI | CCCAGC | 1 cut(s) | 730 |
| HaeIII | GGCC | 2 cut(s) | 384, 883 |
| HhaI | GCGC | 1 cut(s) | 468 |
| Hin1II | CATG | 6 cut(s) | 251, 389, 539, 646, 821, 982 |
| Hin6I | GCGC | 1 cut(s) | 466 |
| HinP1I | GCGC | 1 cut(s) | 466 |
| HincII | GTYRAC | 1 cut(s) | 920 |
| HindII | GTYRAC | 1 cut(s) | 920 |
| HindIII | AAGCTT | 1 cut(s) | 429 |
| HinfI | GANTC | 5 cut(s) | 137, 827, 953, 1112, 1268 |
| HphI | GGTGA | 2 cut(s) | 216, 951 |
| Hpy166II | GTNNAC | 3 cut(s) | 224, 236, 920 |
| Hpy188I | TCNGA | 6 cut(s) | 52, 70, 380, 943, 1117, 1227 |
| Hpy8I | GTNNAC | 3 cut(s) | 224, 236, 920 |
| HpyAV | CCTTC | 3 cut(s) | 237, 548, 1043 |
| HpyCH4III | ACNGT | 4 cut(s) | 63, 217, 496, 569 |
| HpyCH4V | TGCA | 7 cut(s) | 164, 407, 427, 479, 524, 623, 817 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 332, 341, 463, 530, 1144, 1304 |
| HpyF3I | CTNAG | 3 cut(s) | 627, 797, 1224 |
| Hsp92II | CATG | 6 cut(s) | 251, 389, 539, 646, 821, 982 |
| HspAI | GCGC | 1 cut(s) | 466 |
| Kzo9I | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| LguI | GCTCTTC | 2 cut(s) | 325, 342 |
| LmnI | GCTCC | 1 cut(s) | 175 |
| Lsp1109I | GCAGC | 6 cut(s) | 274, 391, 607, 635, 700, 735 |
| LweI | GCATC | 5 cut(s) | 151, 157, 306, 998, 1294 |
| MabI | ACCWGGT | 1 cut(s) | 1063 |
| MaeI | CTAG | 6 cut(s) | 141, 327, 374, 785, 963, 1242 |
| MaeIII | GTNAC | 4 cut(s) | 57, 95, 563, 1169 |
| MalI | GATC | 7 cut(s) | 577, 679, 1038, 1081, 1105, 1198, 1246 |
| MbiI | CCGCTC | 1 cut(s) | 265 |
| MboI | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| MflI | RGATCY | 5 cut(s) | 575, 1036, 1079, 1103, 1196 |
| MhlI | GDGCHC | 1 cut(s) | 337 |
| MluCI | AATT | 6 cut(s) | 121, 144, 200, 588, 937, 1054 |
| MlyI | GAGTC | 2 cut(s) | 131, 1262 |
| MmeI | TCCRAC | 4 cut(s) | 163, 713, 723, 963 |
| MroXI | GAANNNNTTC | 1 cut(s) | 121 |
| MseI | TTAA | 8 cut(s) | 24, 41, 203, 347, 792, 863, 936, 1309 |
| MslI | CAYNNNNRTG | 1 cut(s) | 822 |
| MspA1I | CMGCKG | 3 cut(s) | 92, 726, 974 |
| MspR9I | CCNGG | 3 cut(s) | 769, 1065, 1218 |
| MvaI | CCWGG | 3 cut(s) | 769, 1065, 1218 |
| MvnI | CGCG | 1 cut(s) | 468 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 332, 341, 463, 530, 1144, 1304 |
| NcoI | CCATGG | 1 cut(s) | 642 |
| NdeI | CATATG | 1 cut(s) | 649 |
| NdeII | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| NlaIII | CATG | 6 cut(s) | 251, 389, 539, 646, 821, 982 |
| NlaIV | GGNNCC | 2 cut(s) | 884, 931 |
| NmuCI | GTSAC | 2 cut(s) | 57, 563 |
| NspI | RCATGY | 1 cut(s) | 982 |
| NspV | TTCGAA | 1 cut(s) | 708 |
| PaeR7I | CTCGAG | 1 cut(s) | 450 |
| PasI | CCCWGGG | 1 cut(s) | 768 |
| PciSI | GCTCTTC | 2 cut(s) | 325, 342 |
| PdmI | GAANNNNTTC | 1 cut(s) | 121 |
| PfeI | GAWTC | 3 cut(s) | 827, 953, 1112 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 182 |
| PkrI | GCNGC | 7 cut(s) | 289, 406, 622, 625, 690, 725, 1137 |
| PleI | GAGTC | 2 cut(s) | 131, 1262 |
| PpsI | GAGTC | 2 cut(s) | 131, 1262 |
| PshBI | ATTAAT | 1 cut(s) | 792 |
| Psp124BI | GAGCTC | 1 cut(s) | 337 |
| Psp6I | CCWGG | 3 cut(s) | 767, 1063, 1216 |
| PspEI | GGTNACC | 1 cut(s) | 1169 |
| PspFI | CCCAGC | 1 cut(s) | 726 |
| PspGI | CCWGG | 3 cut(s) | 767, 1063, 1216 |
| PspN4I | GGNNCC | 2 cut(s) | 884, 931 |
| PspPI | GGNCC | 2 cut(s) | 882, 929 |
| PspXI | VCTCGAGB | 1 cut(s) | 450 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 564, 596, 1204, 1236 |
| PstI | CTGCAG | 1 cut(s) | 625 |
| PsuI | RGATCY | 5 cut(s) | 575, 1036, 1079, 1103, 1196 |
| PvuII | CAGCTG | 2 cut(s) | 92, 726 |
| RsaI | GTAC | 4 cut(s) | 196, 246, 255, 1213 |
| RsaNI | GTAC | 4 cut(s) | 195, 245, 254, 1212 |
| RseI | CAYNNNNRTG | 1 cut(s) | 822 |
| SacI | GAGCTC | 1 cut(s) | 337 |
| SapI | GCTCTTC | 2 cut(s) | 325, 342 |
| SaqAI | TTAA | 8 cut(s) | 24, 41, 203, 347, 792, 863, 936, 1309 |
| SatI | GCNGC | 7 cut(s) | 288, 405, 621, 624, 689, 724, 1136 |
| Sau3AI | GATC | 7 cut(s) | 575, 677, 1036, 1079, 1103, 1196, 1244 |
| Sau96I | GGNCC | 2 cut(s) | 882, 929 |
| ScaI | AGTACT | 1 cut(s) | 196 |
| SchI | GAGTC | 2 cut(s) | 131, 1262 |
| ScrFI | CCNGG | 3 cut(s) | 769, 1065, 1218 |
| SduI | GDGCHC | 1 cut(s) | 337 |
| SexAI | ACCWGGT | 1 cut(s) | 1063 |
| SfaNI | GCATC | 5 cut(s) | 151, 157, 306, 998, 1294 |
| SfcI | CTRYAG | 1 cut(s) | 621 |
| Sfr274I | CTCGAG | 1 cut(s) | 450 |
| SfuI | TTCGAA | 1 cut(s) | 708 |
| SinI | GGWCC | 1 cut(s) | 929 |
| SlaI | CTCGAG | 1 cut(s) | 450 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 822 |
| SmlI | CTYRAG | 1 cut(s) | 450 |
| SmoI | CTYRAG | 1 cut(s) | 450 |
| Sse9I | AATT | 6 cut(s) | 121, 144, 200, 588, 937, 1054 |
| SsiI | CCGC | 5 cut(s) | 265, 778, 849, 974, 1135 |
| SspI | AATATT | 1 cut(s) | 898 |
| SspMI | CTAG | 6 cut(s) | 141, 327, 374, 785, 963, 1242 |
| SstI | GAGCTC | 1 cut(s) | 337 |
| StyD4I | CCNGG | 3 cut(s) | 767, 1063, 1216 |
| StyI | CCWWGG | 1 cut(s) | 642 |
| TaaI | ACNGT | 4 cut(s) | 63, 217, 496, 569 |
| TaqI | TCGA | 4 cut(s) | 340, 451, 541, 708 |
| TasI | AATT | 6 cut(s) | 121, 144, 200, 588, 937, 1054 |
| TatI | WGTACW | 3 cut(s) | 194, 244, 253 |
| TauI | GCSGC | 1 cut(s) | 1138 |
| TfiI | GAWTC | 3 cut(s) | 827, 953, 1112 |
| Tru1I | TTAA | 8 cut(s) | 24, 41, 203, 347, 792, 863, 936, 1309 |
| Tru9I | TTAA | 8 cut(s) | 24, 41, 203, 347, 792, 863, 936, 1309 |
| TscAI | CASTG | 3 cut(s) | 574, 671, 1261 |
| TseFI | GTSAC | 2 cut(s) | 57, 563 |
| TseI | GCWGC | 6 cut(s) | 287, 404, 620, 623, 688, 723 |
| Tsp45I | GTSAC | 2 cut(s) | 57, 563 |
| TspDTI | ATGAA | 2 cut(s) | 93, 840 |
| TspGWI | ACGGA | 1 cut(s) | 752 |
| TspRI | CASTG | 3 cut(s) | 574, 671, 1261 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 182 |
| VpaK11BI | GGWCC | 1 cut(s) | 929 |
| VspI | ATTAAT | 1 cut(s) | 792 |
| XapI | RAATTY | 4 cut(s) | 121, 144, 588, 1054 |
| XbaI | TCTAGA | 2 cut(s) | 140, 784 |
| XceI | RCATGY | 1 cut(s) | 982 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1000, 1027 |
| XhoI | CTCGAG | 1 cut(s) | 450 |
| XmnI | GAANNNNTTC | 1 cut(s) | 121 |
| XspI | CTAG | 6 cut(s) | 141, 327, 374, 785, 963, 1242 |
| ZrmI | AGTACT | 1 cut(s) | 196 |