Prupe.6G146700_v2.0.a1

iq-domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
12154481 .. 12163887
9407 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G146700.5

Sequence Viewer

Length: 1311 bp
ATGGGTGTCTCTGGAAAATGGATTAAGGCATTGGTTGGCTTAAAGAAATCAGAAAAGTCACAGTCTTCAGAAAGAGATGAAAATAGAACAGCTGGTAACAAGTTTCGGCACAGAAGAAAGAATTCCATTGAGATTGACTCTAGAATTCAATGTGAGTTTGATGCAGATGCTCCTCCACCAGTTGGAGTTTCCAGTACTCAATTAAACATAGATACTGTGGGTTCACCTTCTGGTTCACTTCAAGTACATGATGTACAAAGTGAGCGGAATGTGAGAGAACAATGGGCTGCCACACGCATCCAAACAGCCTTTCGTGGGTTTCTGGCTAGAAGAGCTCTTCGAGCTTTAAAAGGATTGGTAAGACTTCAAGCCCTAGTCAGAGGCCATGCTGTGAGAAAACAAGCTGCAATAACTCTTCGCTGTATGCAAGCTTTAGTTAGAGTTCAGGCTCGAGTGCGAGCAAGGCGCGTTCGCATTGCATTGGAAAGTCAAACGGTTCAACAAAGACTTCAGCAACAACTTGCAAATGAGGCTCATGTTCGAGAAATAGAAGAAGGATGGTGTGACAGTGTAGGATCTGTTCAAGAAATTCAAGCCAAGCTCTTGAAGAGGCAGGAGGCTGCAGCTAAGCGTGAGAGAGCCATGGCATATGCTCTTGCTCATCAGTGGCAAGCTGGATCAAGACAGCAGCCAGTTCCCTCTGGGTTCGAACCAGATAAAAGCAGCTGGGGTTGGAACTGGTTGGAAAGATGGATGGCTGTCCGTCCCTGGGAGAACCGCTTTCTAGATATTAATCTTAGGGATGGAGTAATGGTGCATGAGAATGAATCCATTGAGGGTAAGAATGGCGGTATATCCCAGTTAAAGTCTGCTGGCAAGAGGCCCCTTTCTTCAAATATTCAATCAAATCTTTCAAGTCAACAGGTTGGTCCCTTTAATTCCGATGGCTGTGATTCTTCACCTAGTAAGTCAGCGGGCATGTTGGAAGCATCCACTACCCAAATGGGCAAGCCAAAGTCCAAACCATATTTGGAAGATCCAGTTGAAGAAGGAAATTCAAAACCTGGTATTAGTTCAAGATCCCATAGTAATCCAAAAGAGAGATCCACAGAATCAGATAAACAAGCAAAGAAGCGGCTGTCTCTGCCTAACAGCAGGGGAGGTCTTGGTTACCAAACTTCCAGACATCCTATTAGATCTAATGTCAAAGGTACGCCTGGTTCTCAGAAGCCCATCAAGACTAGATCAAAACCCAGTGGAAGAGGGGACTCAAATCCCACAAAATCAGTCTCACAAGCTGTTGATGCTTAA

Protein Analysis

437

Amino Acids

48.27

Weight (kDa)

10.37

Isoelectric Point (pI)

61.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 182
AccBSI CCGCTC 1 cut(s) 265
AccII CGCG 1 cut(s) 468
AciI CCGC 5 cut(s) 265, 778, 849, 974, 1135
AclWI GGATC 5 cut(s) 583, 685, 1031, 1074, 1098
AcsI RAATTY 4 cut(s) 121, 144, 588, 1054
AcuI CTGAAG 2 cut(s) 51, 494
AfaI GTAC 4 cut(s) 196, 246, 255, 1213
AfiI CCNNNNNNNGG 3 cut(s) 182, 315, 769
AjnI CCWGG 3 cut(s) 767, 1063, 1216
AjuI GAANNNNNNNTTGG 2 cut(s) 294, 326
Alw21I GWGCWC 1 cut(s) 337
Alw26I GTCTC 3 cut(s) 13, 1146, 1294
AlwI GGATC 5 cut(s) 583, 685, 1031, 1074, 1098
Ama87I CYCGRG 1 cut(s) 450
AoxI GGCC 2 cut(s) 382, 881
ApeKI GCWGC 6 cut(s) 287, 404, 620, 623, 688, 723
ApoI RAATTY 4 cut(s) 121, 144, 588, 1054
AseI ATTAAT 1 cut(s) 792
Asp700I GAANNNNTTC 1 cut(s) 121
AspLEI GCGC 1 cut(s) 468
AspS9I GGNCC 2 cut(s) 882, 929
AsuHPI GGTGA 2 cut(s) 216, 951
AsuII TTCGAA 1 cut(s) 708
AvaI CYCGRG 1 cut(s) 450
AvaII GGWCC 1 cut(s) 929
BanII GRGCYC 1 cut(s) 337
BbsI GAAGAC 1 cut(s) 57
Bbv12I GWGCWC 1 cut(s) 337
BbvI GCAGC 6 cut(s) 274, 391, 607, 635, 700, 735
BccI CCATC 6 cut(s) 552, 744, 748, 797, 938, 1241
BciT130I CCWGG 3 cut(s) 769, 1065, 1218
BcoDI GTCTC 3 cut(s) 13, 1146, 1294
BfaI CTAG 6 cut(s) 141, 327, 374, 785, 963, 1242
BfmI CTRYAG 1 cut(s) 621
BglII AGATCT 1 cut(s) 1196
BisI GCNGC 7 cut(s) 288, 405, 621, 624, 689, 724, 1136
BlpI GCTNAGC 1 cut(s) 627
BlsI GCNGC 7 cut(s) 289, 406, 622, 625, 690, 725, 1137
BmcAI AGTACT 1 cut(s) 196
Bme1390I CCNGG 3 cut(s) 769, 1065, 1218
Bme18I GGWCC 1 cut(s) 929
BmeT110I CYCGRG 1 cut(s) 450
BmgT120I GGNCC 2 cut(s) 882, 929
BmiI GGNNCC 2 cut(s) 884, 931
BmrFI CCNGG 3 cut(s) 769, 1065, 1218
BmrI ACTGGG 2 cut(s) 853, 1248
BmsI GCATC 5 cut(s) 151, 157, 306, 998, 1294
BmuI ACTGGG 2 cut(s) 853, 1248
BpiI GAAGAC 1 cut(s) 57
BplI GAGNNNNNCTC 2 cut(s) 122, 154
Bpu1102I GCTNAGC 1 cut(s) 627
Bpu14I TTCGAA 1 cut(s) 708
BsaBI GATNNNNATC 1 cut(s) 792
BsaJI CCNNGG 3 cut(s) 642, 767, 768
BsaXI ACNNNNNCTCC 2 cut(s) 798, 828
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 315, 769
Bse1I ACTGG 7 cut(s) 179, 192, 692, 743, 859, 1040, 1254
Bse3DI GCAATG 1 cut(s) 474
Bse8I GATNNNNATC 1 cut(s) 792
BseBI CCWGG 3 cut(s) 769, 1065, 1218
BseDI CCNNGG 3 cut(s) 642, 767, 768
BseGI GGATG 6 cut(s) 297, 563, 759, 808, 989, 1186
BseJI GATNNNNATC 1 cut(s) 792
BseLI CCNNNNNNNGG 3 cut(s) 182, 315, 769
BseMI GCAATG 1 cut(s) 474
BseMII CTCAG 1 cut(s) 1238
BseNI ACTGG 7 cut(s) 179, 192, 692, 743, 859, 1040, 1254
BseRI GAGGAG 1 cut(s) 162
BseXI GCAGC 6 cut(s) 274, 391, 607, 635, 700, 735
BseYI CCCAGC 1 cut(s) 726
Bsh1236I CGCG 1 cut(s) 468
BshFI GGCC 2 cut(s) 384, 883
BsiHKAI GWGCWC 1 cut(s) 337
BsiHKCI CYCGRG 1 cut(s) 450
BslFI GGGAC 3 cut(s) 750, 915, 1280
BslI CCNNNNNNNGG 3 cut(s) 182, 315, 769
BsmAI GTCTC 3 cut(s) 13, 1146, 1294
BsmFI GGGAC 3 cut(s) 750, 915, 1280
BsnI GGCC 2 cut(s) 384, 883
BsoBI CYCGRG 1 cut(s) 450
Bsp119I TTCGAA 1 cut(s) 708
Bsp1286I GDGCHC 1 cut(s) 337
Bsp1407I TGTACA 1 cut(s) 253
Bsp143I GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
Bsp1720I GCTNAGC 1 cut(s) 627
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 5 cut(s) 265, 778, 849, 974, 1135
BspANI GGCC 2 cut(s) 384, 883
BspCNI CTCAG 1 cut(s) 1237
BspFNI CGCG 1 cut(s) 468
BspLI GGNNCC 2 cut(s) 884, 931
BspMAI CTGCAG 1 cut(s) 625
BspPI GGATC 5 cut(s) 583, 685, 1031, 1074, 1098
BspQI GCTCTTC 2 cut(s) 325, 342
BspT104I TTCGAA 1 cut(s) 708
BsrBI CCGCTC 1 cut(s) 265
BsrDI GCAATG 1 cut(s) 474
BsrGI TGTACA 1 cut(s) 253
BsrI ACTGG 7 cut(s) 179, 192, 692, 743, 859, 1040, 1254
BssECI CCNNGG 3 cut(s) 642, 767, 768
BssMI GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
BssT1I CCWWGG 1 cut(s) 642
Bst2UI CCWGG 3 cut(s) 769, 1065, 1218
Bst4CI ACNGT 4 cut(s) 63, 217, 496, 569
Bst6I CTCTTC 5 cut(s) 325, 342, 420, 602, 1255
BstAUI TGTACA 1 cut(s) 253
BstBI TTCGAA 1 cut(s) 708
BstC8I GCNNGC 6 cut(s) 429, 459, 672, 874, 976, 1010
BstDEI CTNAG 3 cut(s) 627, 797, 1224
BstDSI CCRYGG 1 cut(s) 642
BstEII GGTNACC 1 cut(s) 1169
BstF5I GGATG 6 cut(s) 297, 563, 759, 808, 989, 1186
BstFNI CGCG 1 cut(s) 468
BstHHI GCGC 1 cut(s) 468
BstKTI GATC 7 cut(s) 578, 680, 1039, 1082, 1106, 1199, 1247
BstMAI GTCTC 3 cut(s) 13, 1146, 1294
BstMBI GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
BstMWI GCNNNNNNNGC 6 cut(s) 332, 341, 463, 530, 1144, 1304
BstNI CCWGG 3 cut(s) 769, 1065, 1218
BstNSI RCATGY 1 cut(s) 982
BstPI GGTNACC 1 cut(s) 1169
BstSCI CCNGG 3 cut(s) 767, 1063, 1216
BstSFI CTRYAG 1 cut(s) 621
BstUI CGCG 1 cut(s) 468
BstV1I GCAGC 6 cut(s) 274, 391, 607, 635, 700, 735
BstV2I GAAGAC 1 cut(s) 57
BstX2I RGATCY 5 cut(s) 575, 1036, 1079, 1103, 1196
BstYI RGATCY 5 cut(s) 575, 1036, 1079, 1103, 1196
BsuRI GGCC 2 cut(s) 384, 883
BtgI CCRYGG 1 cut(s) 642
BtsCI GGATG 6 cut(s) 297, 563, 759, 808, 989, 1186
BtsIMutI CAGTG 3 cut(s) 574, 671, 1261
Cac8I GCNNGC 6 cut(s) 429, 459, 672, 874, 976, 1010
CfoI GCGC 1 cut(s) 468
Cfr13I GGNCC 2 cut(s) 882, 929
CsiI ACCWGGT 1 cut(s) 1063
Csp6I GTAC 4 cut(s) 195, 245, 254, 1212
CviAII CATG 6 cut(s) 248, 386, 536, 643, 818, 979
CviQI GTAC 4 cut(s) 195, 245, 254, 1212
DdeI CTNAG 3 cut(s) 627, 797, 1224
DpnI GATC 7 cut(s) 577, 679, 1038, 1081, 1105, 1198, 1246
DpnII GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
DraI TTTAAA 1 cut(s) 348
Eam1104I CTCTTC 5 cut(s) 325, 342, 420, 602, 1255
EarI CTCTTC 5 cut(s) 325, 342, 420, 602, 1255
Ecl136II GAGCTC 1 cut(s) 335
Eco130I CCWWGG 1 cut(s) 642
Eco24I GRGCYC 1 cut(s) 337
Eco47I GGWCC 1 cut(s) 929
Eco53kI GAGCTC 1 cut(s) 335
Eco57I CTGAAG 2 cut(s) 51, 494
Eco88I CYCGRG 1 cut(s) 450
Eco91I GGTNACC 1 cut(s) 1169
EcoICRI GAGCTC 1 cut(s) 335
EcoO109I RGGNCCY 1 cut(s) 882
EcoO65I GGTNACC 1 cut(s) 1169
EcoRI GAATTC 2 cut(s) 121, 144
EcoRII CCWGG 3 cut(s) 767, 1063, 1216
EcoT14I CCWWGG 1 cut(s) 642
EcoT38I GRGCYC 1 cut(s) 337
ErhI CCWWGG 1 cut(s) 642
FaeI CATG 6 cut(s) 251, 389, 539, 646, 821, 982
FaqI GGGAC 3 cut(s) 750, 915, 1280
FatI CATG 6 cut(s) 247, 385, 535, 642, 817, 978
FauI CCCGC 1 cut(s) 967
FauNDI CATATG 1 cut(s) 649
Fnu4HI GCNGC 7 cut(s) 288, 405, 621, 624, 689, 724, 1136
FokI GGATG 6 cut(s) 284, 570, 766, 815, 976, 1173
FriOI GRGCYC 1 cut(s) 337
Fsp4HI GCNGC 7 cut(s) 288, 405, 621, 624, 689, 724, 1136
FspBI CTAG 6 cut(s) 141, 327, 374, 785, 963, 1242
GlaI GCGC 1 cut(s) 467
GluI GCNGC 7 cut(s) 288, 405, 621, 624, 689, 724, 1136
GsaI CCCAGC 1 cut(s) 730
HaeIII GGCC 2 cut(s) 384, 883
HhaI GCGC 1 cut(s) 468
Hin1II CATG 6 cut(s) 251, 389, 539, 646, 821, 982
Hin6I GCGC 1 cut(s) 466
HinP1I GCGC 1 cut(s) 466
HincII GTYRAC 1 cut(s) 920
HindII GTYRAC 1 cut(s) 920
HindIII AAGCTT 1 cut(s) 429
HinfI GANTC 5 cut(s) 137, 827, 953, 1112, 1268
HphI GGTGA 2 cut(s) 216, 951
Hpy166II GTNNAC 3 cut(s) 224, 236, 920
Hpy188I TCNGA 6 cut(s) 52, 70, 380, 943, 1117, 1227
Hpy8I GTNNAC 3 cut(s) 224, 236, 920
HpyAV CCTTC 3 cut(s) 237, 548, 1043
HpyCH4III ACNGT 4 cut(s) 63, 217, 496, 569
HpyCH4V TGCA 7 cut(s) 164, 407, 427, 479, 524, 623, 817
HpyF10VI GCNNNNNNNGC 6 cut(s) 332, 341, 463, 530, 1144, 1304
HpyF3I CTNAG 3 cut(s) 627, 797, 1224
Hsp92II CATG 6 cut(s) 251, 389, 539, 646, 821, 982
HspAI GCGC 1 cut(s) 466
Kzo9I GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
LguI GCTCTTC 2 cut(s) 325, 342
LmnI GCTCC 1 cut(s) 175
Lsp1109I GCAGC 6 cut(s) 274, 391, 607, 635, 700, 735
LweI GCATC 5 cut(s) 151, 157, 306, 998, 1294
MabI ACCWGGT 1 cut(s) 1063
MaeI CTAG 6 cut(s) 141, 327, 374, 785, 963, 1242
MaeIII GTNAC 4 cut(s) 57, 95, 563, 1169
MalI GATC 7 cut(s) 577, 679, 1038, 1081, 1105, 1198, 1246
MbiI CCGCTC 1 cut(s) 265
MboI GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
MflI RGATCY 5 cut(s) 575, 1036, 1079, 1103, 1196
MhlI GDGCHC 1 cut(s) 337
MluCI AATT 6 cut(s) 121, 144, 200, 588, 937, 1054
MlyI GAGTC 2 cut(s) 131, 1262
MmeI TCCRAC 4 cut(s) 163, 713, 723, 963
MroXI GAANNNNTTC 1 cut(s) 121
MseI TTAA 8 cut(s) 24, 41, 203, 347, 792, 863, 936, 1309
MslI CAYNNNNRTG 1 cut(s) 822
MspA1I CMGCKG 3 cut(s) 92, 726, 974
MspR9I CCNGG 3 cut(s) 769, 1065, 1218
MvaI CCWGG 3 cut(s) 769, 1065, 1218
MvnI CGCG 1 cut(s) 468
MwoI GCNNNNNNNGC 6 cut(s) 332, 341, 463, 530, 1144, 1304
NcoI CCATGG 1 cut(s) 642
NdeI CATATG 1 cut(s) 649
NdeII GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
NlaIII CATG 6 cut(s) 251, 389, 539, 646, 821, 982
NlaIV GGNNCC 2 cut(s) 884, 931
NmuCI GTSAC 2 cut(s) 57, 563
NspI RCATGY 1 cut(s) 982
NspV TTCGAA 1 cut(s) 708
PaeR7I CTCGAG 1 cut(s) 450
PasI CCCWGGG 1 cut(s) 768
PciSI GCTCTTC 2 cut(s) 325, 342
PdmI GAANNNNTTC 1 cut(s) 121
PfeI GAWTC 3 cut(s) 827, 953, 1112
PflMI CCANNNNNTGG 1 cut(s) 182
PkrI GCNGC 7 cut(s) 289, 406, 622, 625, 690, 725, 1137
PleI GAGTC 2 cut(s) 131, 1262
PpsI GAGTC 2 cut(s) 131, 1262
PshBI ATTAAT 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 337
Psp6I CCWGG 3 cut(s) 767, 1063, 1216
PspEI GGTNACC 1 cut(s) 1169
PspFI CCCAGC 1 cut(s) 726
PspGI CCWGG 3 cut(s) 767, 1063, 1216
PspN4I GGNNCC 2 cut(s) 884, 931
PspPI GGNCC 2 cut(s) 882, 929
PspXI VCTCGAGB 1 cut(s) 450
PsrI GAACNNNNNNTAC 4 cut(s) 564, 596, 1204, 1236
PstI CTGCAG 1 cut(s) 625
PsuI RGATCY 5 cut(s) 575, 1036, 1079, 1103, 1196
PvuII CAGCTG 2 cut(s) 92, 726
RsaI GTAC 4 cut(s) 196, 246, 255, 1213
RsaNI GTAC 4 cut(s) 195, 245, 254, 1212
RseI CAYNNNNRTG 1 cut(s) 822
SacI GAGCTC 1 cut(s) 337
SapI GCTCTTC 2 cut(s) 325, 342
SaqAI TTAA 8 cut(s) 24, 41, 203, 347, 792, 863, 936, 1309
SatI GCNGC 7 cut(s) 288, 405, 621, 624, 689, 724, 1136
Sau3AI GATC 7 cut(s) 575, 677, 1036, 1079, 1103, 1196, 1244
Sau96I GGNCC 2 cut(s) 882, 929
ScaI AGTACT 1 cut(s) 196
SchI GAGTC 2 cut(s) 131, 1262
ScrFI CCNGG 3 cut(s) 769, 1065, 1218
SduI GDGCHC 1 cut(s) 337
SexAI ACCWGGT 1 cut(s) 1063
SfaNI GCATC 5 cut(s) 151, 157, 306, 998, 1294
SfcI CTRYAG 1 cut(s) 621
Sfr274I CTCGAG 1 cut(s) 450
SfuI TTCGAA 1 cut(s) 708
SinI GGWCC 1 cut(s) 929
SlaI CTCGAG 1 cut(s) 450
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 1 cut(s) 450
SmoI CTYRAG 1 cut(s) 450
Sse9I AATT 6 cut(s) 121, 144, 200, 588, 937, 1054
SsiI CCGC 5 cut(s) 265, 778, 849, 974, 1135
SspI AATATT 1 cut(s) 898
SspMI CTAG 6 cut(s) 141, 327, 374, 785, 963, 1242
SstI GAGCTC 1 cut(s) 337
StyD4I CCNGG 3 cut(s) 767, 1063, 1216
StyI CCWWGG 1 cut(s) 642
TaaI ACNGT 4 cut(s) 63, 217, 496, 569
TaqI TCGA 4 cut(s) 340, 451, 541, 708
TasI AATT 6 cut(s) 121, 144, 200, 588, 937, 1054
TatI WGTACW 3 cut(s) 194, 244, 253
TauI GCSGC 1 cut(s) 1138
TfiI GAWTC 3 cut(s) 827, 953, 1112
Tru1I TTAA 8 cut(s) 24, 41, 203, 347, 792, 863, 936, 1309
Tru9I TTAA 8 cut(s) 24, 41, 203, 347, 792, 863, 936, 1309
TscAI CASTG 3 cut(s) 574, 671, 1261
TseFI GTSAC 2 cut(s) 57, 563
TseI GCWGC 6 cut(s) 287, 404, 620, 623, 688, 723
Tsp45I GTSAC 2 cut(s) 57, 563
TspDTI ATGAA 2 cut(s) 93, 840
TspGWI ACGGA 1 cut(s) 752
TspRI CASTG 3 cut(s) 574, 671, 1261
Van91I CCANNNNNTGG 1 cut(s) 182
VpaK11BI GGWCC 1 cut(s) 929
VspI ATTAAT 1 cut(s) 792
XapI RAATTY 4 cut(s) 121, 144, 588, 1054
XbaI TCTAGA 2 cut(s) 140, 784
XceI RCATGY 1 cut(s) 982
XcmI CCANNNNNNNNNTGG 2 cut(s) 1000, 1027
XhoI CTCGAG 1 cut(s) 450
XmnI GAANNNNTTC 1 cut(s) 121
XspI CTAG 6 cut(s) 141, 327, 374, 785, 963, 1242
ZrmI AGTACT 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.