Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0015149

Physical Location & Seq

Genomic Coordinates Reverse (-)

24988028 .. 24990186

Gene Structure 2159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G257500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 900 bp

ATGGAGGACGCAATGGGTGCCACGTGGTCCGACGGGTCGGAGGAGGAGCTCGTGAGAGAGCTTCTGGACAATGAGACACCATTCTTTGTGCTACCAGAGGCGGCTCTACAATCCCAGATGAGTGTTTCCAATGAAGATAGTGTTGTTAATCGGTTCATCCCGACCGTCTATTCTGGTCCAACAATCAAAGATATCGAGACTGCTTTGTCTGTCACCACTGGAACAATTCAACCCCAAGAACTTTCACCGGCTAGGCTCTCAACACTGGAAAGGGGTTTGAGCAAGGTTGAGCATAAGTACACTCTGAAGATTAAAAGCTGTGACAATGGAGCAATGGCTGATGATGGCTATAAATGGAGGAAGTACGGGCAGAAATCCATTAAGAATAGCCCAAATCCTAGGAGCTATTACAGGTGCACAAACCCAAGGTGCAGTGCTAAGAAGCAAGTTGAGAGGTCGAGTGAGGACCCAGACACACTCATCATCACCTATGAAGGGCTCCACTTACACTTTGCCTACCCATTTTTCCCACTCAACAACCAGGCCCAGAACACCAGCCCACCTATGAAGAAGCCCAGGAACAAAACCTCAAAGCCACGCGCAGAAGACCGTGAACATGAAGCCCAAGAGAGCCCGCGAAGCATTACCCCTGACCCTGACCCGGACCCGGATCTGCAGCCCGGCCCATTCCCCGACCAACATCAAGAATTTGTTGAAAAAGAGCCAAACGCACAAGGGTTGCTTCAAGATGTGGTGCCATTTATGATTAGGAACCCTAATCCATCAAGTGCTTCTTCAAATTCTTCTTGTTCCTCCTACCGGTCGTCTCCAACATCTCCTTCTTCTCTATCATGGGCTACTTCGTATTTCGATATTGATTTTAATCATAGCTTTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

300

Amino Acids

33.49

Weight (kDa)

5.18

Isoelectric Point (pI)

52.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015149)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43290
fragaria_vesca	FvH4_6g13470
malus_domestica	MD04G1131000.v1.1 MD12G1144100.v1.1
prunus_persica	Prupe.6G257500_v2.0.a1
pyrus_communis	pycom04g11930 pycom12g13870
rosa_chinensis	RchiOBHm_Chr3g0466341
rosa_laevigata	RLG00000024584
rosa_multiflora	Rmu_sc0003480.1_g000013
rosa_roxburghii	Rroxscaffold_6G00414560
rosa_rugosa	Rorug03G0081100
rosa_samantha	Rh3AG127400 Rh3BG148800 Rh3DG149500
rosa_wichuraiana	Rw3G012040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	205
AccB1I	GGYRCC	2 cut(s)	17, 754
AccII	CGCG	2 cut(s)	600, 637
AciI	CCGC	2 cut(s)	101, 635
AclWI	GGATC	1 cut(s)	678
AcsI	RAATTY	2 cut(s)	707, 799
AcuI	CTGAAG	1 cut(s)	326
AcvI	CACGTG	1 cut(s)	24
AfaI	GTAC	2 cut(s)	299, 365
AfiI	CCNNNNNNNGG	4 cut(s)	495, 661, 667, 819
AgeI	ACCGGT	1 cut(s)	819
AgsI	TTSAA	4 cut(s)	230, 716, 746, 798
AjnI	CCWGG	2 cut(s)	540, 575
AjuI	GAANNNNNNNTTGG	2 cut(s)	823, 855
AluBI	AGCT	5 cut(s)	49, 61, 318, 405, 891
AluI	AGCT	5 cut(s)	49, 61, 318, 405, 891
Alw21I	GWGCWC	2 cut(s)	51, 419
Alw26I	GTCTC	3 cut(s)	68, 191, 831
Alw44I	GTGCAC	1 cut(s)	415
AlwI	GGATC	1 cut(s)	678
AoxI	GGCC	2 cut(s)	543, 682
ApaLI	GTGCAC	1 cut(s)	415
ApeKI	GCWGC	1 cut(s)	676
ApoI	RAATTY	2 cut(s)	707, 799
AsiGI	ACCGGT	1 cut(s)	819
AspA2I	CCTAGG	1 cut(s)	398
AspLEI	GCGC	1 cut(s)	602
AspS9I	GGNCC	6 cut(s)	27, 176, 466, 544, 664, 683
AsuC2I	CCSGG	3 cut(s)	662, 668, 681
AsuHPI	GGTGA	3 cut(s)	205, 237, 478
AvaII	GGWCC	4 cut(s)	27, 176, 466, 664
AvrII	CCTAGG	1 cut(s)	398
BaeGI	GKGCMC	1 cut(s)	419
BanI	GGYRCC	2 cut(s)	17, 754
BanII	GRGCYC	3 cut(s)	51, 501, 635
BauI	CACGAG	1 cut(s)	50
BbrPI	CACGTG	1 cut(s)	24
BbsI	GAAGAC	1 cut(s)	612
Bbv12I	GWGCWC	2 cut(s)	51, 419
BbvI	GCAGC	1 cut(s)	688
BccI	CCATC	2 cut(s)	338, 790
BciT130I	CCWGG	2 cut(s)	542, 577
BcnI	CCSGG	3 cut(s)	662, 668, 681
BcoDI	GTCTC	3 cut(s)	68, 191, 831
BfaI	CTAG	2 cut(s)	252, 399
BfmI	CTRYAG	1 cut(s)	674
BisI	GCNGC	2 cut(s)	102, 677
BlnI	CCTAGG	1 cut(s)	398
BlsI	GCNGC	2 cut(s)	103, 678
Bme1390I	CCNGG	5 cut(s)	542, 577, 662, 668, 681
Bme18I	GGWCC	4 cut(s)	27, 176, 466, 664
BmgT120I	GGNCC	6 cut(s)	27, 176, 466, 544, 664, 683
BmiI	GGNNCC	6 cut(s)	19, 468, 500, 666, 756, 773
BmrFI	CCNGG	5 cut(s)	542, 577, 662, 668, 681
BpiI	GAAGAC	1 cut(s)	612
BpuMI	CCSGG	3 cut(s)	662, 668, 681
BsaAI	YACGTR	1 cut(s)	24
BsaBI	GATNNNNATC	1 cut(s)	882
BsaJI	CCNNGG	3 cut(s)	398, 425, 575
BsaWI	WCCGGW	1 cut(s)	819
Bsc4I	CCNNNNNNNGG	4 cut(s)	495, 661, 667, 819
Bse118I	RCCGGY	2 cut(s)	247, 819
Bse1I	ACTGG	2 cut(s)	223, 270
Bse3DI	GCAATG	2 cut(s)	18, 339
Bse8I	GATNNNNATC	1 cut(s)	882
BseBI	CCWGG	2 cut(s)	542, 577
BseDI	CCNNGG	3 cut(s)	398, 425, 575
BseGI	GGATG	1 cut(s)	156
BseJI	GATNNNNATC	1 cut(s)	882
BseLI	CCNNNNNNNGG	4 cut(s)	495, 661, 667, 819
BseMI	GCAATG	2 cut(s)	18, 339
BseNI	ACTGG	2 cut(s)	223, 270
BseRI	GAGGAG	2 cut(s)	56, 59
BseSI	GKGCMC	1 cut(s)	419
BseXI	GCAGC	1 cut(s)	688
BsgI	GTGCAG	1 cut(s)	451
Bsh1236I	CGCG	2 cut(s)	600, 637
Bsh1285I	CGRYCG	2 cut(s)	165, 824
BshFI	GGCC	2 cut(s)	545, 684
BshNI	GGYRCC	2 cut(s)	17, 754
BshTI	ACCGGT	1 cut(s)	819
BsiEI	CGRYCG	2 cut(s)	165, 824
BsiHKAI	GWGCWC	2 cut(s)	51, 419
BsiSI	CCGG	5 cut(s)	248, 662, 668, 681, 820
BslI	CCNNNNNNNGG	4 cut(s)	495, 661, 667, 819
BsmAI	GTCTC	3 cut(s)	68, 191, 831
BsmBI	CGTCTC	1 cut(s)	831
BsnI	GGCC	2 cut(s)	545, 684
Bsp1286I	GDGCHC	4 cut(s)	51, 419, 501, 635
Bsp143I	GATC	1 cut(s)	670
BspACI	CCGC	2 cut(s)	101, 635
BspANI	GGCC	2 cut(s)	545, 684
BspFNI	CGCG	2 cut(s)	600, 637
BspLI	GGNNCC	6 cut(s)	19, 468, 500, 666, 756, 773
BspMAI	CTGCAG	1 cut(s)	678
BspPI	GGATC	1 cut(s)	678
BspT107I	GGYRCC	2 cut(s)	17, 754
BsrDI	GCAATG	2 cut(s)	18, 339
BsrFI	RCCGGY	2 cut(s)	247, 819
BsrI	ACTGG	2 cut(s)	223, 270
BssAI	RCCGGY	2 cut(s)	247, 819
BssECI	CCNNGG	3 cut(s)	398, 425, 575
BssMI	GATC	1 cut(s)	670
BssSI	CACGAG	1 cut(s)	50
BssT1I	CCWWGG	2 cut(s)	398, 425
Bst2BI	CACGAG	1 cut(s)	50
Bst2UI	CCWGG	2 cut(s)	542, 577
Bst4CI	ACNGT	2 cut(s)	166, 611
BstAPI	GCANNNNNTGC	1 cut(s)	17
BstBAI	YACGTR	1 cut(s)	24
BstC8I	GCNNGC	1 cut(s)	635
BstDEI	CTNAG	1 cut(s)	438
BstF5I	GGATG	1 cut(s)	156
BstFNI	CGCG	2 cut(s)	600, 637
BstHHI	GCGC	1 cut(s)	602
BstKTI	GATC	1 cut(s)	673
BstMAI	GTCTC	3 cut(s)	68, 191, 831
BstMBI	GATC	1 cut(s)	670
BstMCI	CGRYCG	2 cut(s)	165, 824
BstMWI	GCNNNNNNNGC	2 cut(s)	17, 639
BstNI	CCWGG	2 cut(s)	542, 577
BstSCI	CCNGG	5 cut(s)	540, 575, 660, 666, 679
BstSFI	CTRYAG	1 cut(s)	674
BstSLI	GKGCMC	1 cut(s)	419
BstUI	CGCG	2 cut(s)	600, 637
BstV1I	GCAGC	1 cut(s)	688
BstV2I	GAAGAC	1 cut(s)	612
BstX2I	RGATCY	1 cut(s)	670
BstYI	RGATCY	1 cut(s)	670
BsuRI	GGCC	2 cut(s)	545, 684
BtsCI	GGATG	1 cut(s)	156
BtsI	GCAGTG	1 cut(s)	439
BtsIMutI	CAGTG	3 cut(s)	216, 263, 439
Cac8I	GCNNGC	1 cut(s)	635
CfoI	GCGC	1 cut(s)	602
Cfr10I	RCCGGY	2 cut(s)	247, 819
Cfr13I	GGNCC	6 cut(s)	27, 176, 466, 544, 664, 683
CseI	GACGC	1 cut(s)	17
Csp6I	GTAC	2 cut(s)	298, 364
CspAI	ACCGGT	1 cut(s)	819
CviAII	CATG	2 cut(s)	617, 852
CviQI	GTAC	2 cut(s)	298, 364
DdeI	CTNAG	1 cut(s)	438
DpnI	GATC	1 cut(s)	672
DpnII	GATC	1 cut(s)	670
DrdI	GACNNNNNNGTC	1 cut(s)	205
DseDI	GACNNNNNNGTC	1 cut(s)	205
Ecl136II	GAGCTC	1 cut(s)	49
Eco130I	CCWWGG	2 cut(s)	398, 425
Eco24I	GRGCYC	3 cut(s)	51, 501, 635
Eco32I	GATATC	1 cut(s)	193
Eco47I	GGWCC	4 cut(s)	27, 176, 466, 664
Eco53kI	GAGCTC	1 cut(s)	49
Eco57I	CTGAAG	1 cut(s)	326
Eco72I	CACGTG	1 cut(s)	24
EcoICRI	GAGCTC	1 cut(s)	49
EcoO109I	RGGNCCY	1 cut(s)	466
EcoRII	CCWGG	2 cut(s)	540, 575
EcoRV	GATATC	1 cut(s)	193
EcoT14I	CCWWGG	2 cut(s)	398, 425
EcoT38I	GRGCYC	3 cut(s)	51, 501, 635
ErhI	CCWWGG	2 cut(s)	398, 425
Esp3I	CGTCTC	1 cut(s)	831
FaeI	CATG	2 cut(s)	620, 855
FaiI	YATR	8 cut(s)	294, 351, 492, 566, 618, 764, 853, 888
FalI	AAGNNNNNCTT	4 cut(s)	726, 758, 778, 810
FatI	CATG	2 cut(s)	616, 851
FauI	CCCGC	1 cut(s)	642
Fnu4HI	GCNGC	2 cut(s)	102, 677
FokI	GGATG	1 cut(s)	143
FriOI	GRGCYC	3 cut(s)	51, 501, 635
Fsp4HI	GCNGC	2 cut(s)	102, 677
FspBI	CTAG	2 cut(s)	252, 399
GlaI	GCGC	1 cut(s)	601
GluI	GCNGC	2 cut(s)	102, 677
HaeIII	GGCC	2 cut(s)	545, 684
HapII	CCGG	5 cut(s)	248, 662, 668, 681, 820
HgaI	GACGC	1 cut(s)	17
HhaI	GCGC	1 cut(s)	602
Hin1II	CATG	2 cut(s)	620, 855
Hin6I	GCGC	1 cut(s)	600
HinP1I	GCGC	1 cut(s)	600
HpaII	CCGG	5 cut(s)	248, 662, 668, 681, 820
HphI	GGTGA	3 cut(s)	205, 237, 478
Hpy166II	GTNNAC	3 cut(s)	300, 417, 614
Hpy188I	TCNGA	3 cut(s)	31, 40, 306
Hpy188III	TCNNGA	6 cut(s)	52, 65, 160, 196, 704, 746
Hpy8I	GTNNAC	3 cut(s)	300, 417, 614
Hpy99I	CGWCG	1 cut(s)	35
HpyAV	CCTTC	2 cut(s)	488, 849
HpyCH4III	ACNGT	2 cut(s)	166, 611
HpyCH4IV	ACGT	1 cut(s)	23
HpyCH4V	TGCA	3 cut(s)	417, 432, 676
HpyF10VI	GCNNNNNNNGC	2 cut(s)	17, 639
HpyF3I	CTNAG	1 cut(s)	438
HpySE526I	ACGT	1 cut(s)	23
Hsp92II	CATG	2 cut(s)	620, 855
HspAI	GCGC	1 cut(s)	600
Kzo9I	GATC	1 cut(s)	670
LmnI	GCTCC	4 cut(s)	46, 329, 402, 504
Lsp1109I	GCAGC	1 cut(s)	688
MaeI	CTAG	2 cut(s)	252, 399
MaeII	ACGT	1 cut(s)	23
MaeIII	GTNAC	2 cut(s)	211, 320
MalI	GATC	1 cut(s)	672
MboI	GATC	1 cut(s)	670
MboII	GAAGA	7 cut(s)	146, 319, 580, 617, 786, 795, 834
MflI	RGATCY	1 cut(s)	670
MhlI	GDGCHC	4 cut(s)	51, 419, 501, 635
MluCI	AATT	3 cut(s)	225, 707, 799
MmeI	TCCRAC	4 cut(s)	18, 54, 203, 854
MnlI	CCTC	8 cut(s)	34, 37, 91, 351, 447, 457, 598, 823
MseI	TTAA	4 cut(s)	147, 312, 381, 882
MspI	CCGG	5 cut(s)	248, 662, 668, 681, 820
MspR9I	CCNGG	5 cut(s)	542, 577, 662, 668, 681
MvaI	CCWGG	2 cut(s)	542, 577
MvnI	CGCG	2 cut(s)	600, 637
MwoI	GCNNNNNNNGC	2 cut(s)	17, 639
NciI	CCSGG	3 cut(s)	662, 668, 681
NdeII	GATC	1 cut(s)	670
NlaIII	CATG	2 cut(s)	620, 855
NlaIV	GGNNCC	6 cut(s)	19, 468, 500, 666, 756, 773
NmuCI	GTSAC	2 cut(s)	211, 320
PinAI	ACCGGT	1 cut(s)	819
PkrI	GCNGC	2 cut(s)	103, 678
PmaCI	CACGTG	1 cut(s)	24
PmlI	CACGTG	1 cut(s)	24
Ppu21I	YACGTR	1 cut(s)	24
PpuMI	RGGWCCY	1 cut(s)	466
Psp124BI	GAGCTC	1 cut(s)	51
Psp5II	RGGWCCY	1 cut(s)	466
Psp6I	CCWGG	2 cut(s)	540, 575
PspCI	CACGTG	1 cut(s)	24
PspGI	CCWGG	2 cut(s)	540, 575
PspN4I	GGNNCC	6 cut(s)	19, 468, 500, 666, 756, 773
PspPI	GGNCC	6 cut(s)	27, 176, 466, 544, 664, 683
PspPPI	RGGWCCY	1 cut(s)	466
PstI	CTGCAG	1 cut(s)	678
PsuI	RGATCY	1 cut(s)	670
RsaI	GTAC	2 cut(s)	299, 365
RsaNI	GTAC	2 cut(s)	298, 364
SacI	GAGCTC	1 cut(s)	51
SaqAI	TTAA	4 cut(s)	147, 312, 381, 882
SatI	GCNGC	2 cut(s)	102, 677
Sau3AI	GATC	1 cut(s)	670
Sau96I	GGNCC	6 cut(s)	27, 176, 466, 544, 664, 683
ScrFI	CCNGG	5 cut(s)	542, 577, 662, 668, 681
SduI	GDGCHC	4 cut(s)	51, 419, 501, 635
SfcI	CTRYAG	1 cut(s)	674
SinI	GGWCC	4 cut(s)	27, 176, 466, 664
Sse9I	AATT	3 cut(s)	225, 707, 799
SsiI	CCGC	2 cut(s)	101, 635
SspMI	CTAG	2 cut(s)	252, 399
SstI	GAGCTC	1 cut(s)	51
StyD4I	CCNGG	5 cut(s)	540, 575, 660, 666, 679
StyI	CCWWGG	2 cut(s)	398, 425
TaaI	ACNGT	2 cut(s)	166, 611
TaiI	ACGT	1 cut(s)	26
TaqI	TCGA	3 cut(s)	195, 458, 870
TasI	AATT	3 cut(s)	225, 707, 799
TatI	WGTACW	1 cut(s)	297
TauI	GCSGC	1 cut(s)	104
Tru1I	TTAA	4 cut(s)	147, 312, 381, 882
Tru9I	TTAA	4 cut(s)	147, 312, 381, 882
TscAI	CASTG	3 cut(s)	223, 270, 439
TseFI	GTSAC	2 cut(s)	211, 320
TseI	GCWGC	1 cut(s)	676
Tsp45I	GTSAC	2 cut(s)	211, 320
TspDTI	ATGAA	5 cut(s)	145, 147, 507, 581, 633
TspRI	CASTG	3 cut(s)	223, 270, 439
VneI	GTGCAC	1 cut(s)	415
VpaK11BI	GGWCC	4 cut(s)	27, 176, 466, 664
XapI	RAATTY	2 cut(s)	707, 799
XmaJI	CCTAGG	1 cut(s)	398
XspI	CTAG	2 cut(s)	252, 399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.