Prupe.6G259100_v2.0.a1
ERF Family

Tetratricopeptide repeat (TPR)-like superfamily protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
25045185 .. 25048869
3685 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G259100.2

Sequence Viewer

Length: 1293 bp
ATGATTCACACCGCAGTTAAGCTATCACGAGCTGGGGCTACCGTTGCTCGAACCGCCAAGCTCGGGCCCTCCCTCCTTCAACGATCACCACCGTCCAGACTAGTTCACGATGGGATCAACGGCTCAAACGCCAACCCTGTTGCTCTTCAGATGATCAACTACGCTCTCTCTCATGCCAGGTCCCAGAAATCAGATGAATCGTATGCACAAGGTCTGCTTGTATTGGAACAGTGCCTTTCGACTCAGCCAAGTGAAGGGCAGGACCCTGCTGGTGATAATTCAAGGGGAATGGTTTTATTGGCCATGTCCACTTTATCATCTGAAAGAGGAAATTTTGATGAAGCAATGGATAAACTGCAAAAAGTTCAAGACTTGACCAGCTGTTCAATTGGTGTCAGGGTTGCCGCCTTGGAGGCTCTTGTTGGACTTCACTTAGAGTTGGAGCAGGATGATACCTCATCAGTGCTCGCAGATAAATTCTTAGAACTGTTGGTGAAGAACGAGCCTGGATCTAATGGTGGAGATTCTGAGGTTATACATGCTCGTGCTAGAGCAGTAAAAGGGCTTGTTGAGCTTGTCCATGGTAATACTGTGTCAGCTGAGTCTTTCTTTCGAGGACTTAAGGACAACCTGGAAATCACCGGTAGTGCTGCTTTATCCTATGGAGAATTCTTACATGCGTCACAGAAATTTTCGTTGGCAAAGGATGTCTACCAGAATGTTATTCAAGGGGTTTCCAAGAATAAAGAGTTCAGTAACTCAAATGCATTGGCCGCCTGTAATATGTCACCAGAGGAAGTTTCCCTTGCTGCTACATGTGCTTTGGGACAGCTTGAGGCTCACTTGGGGAACTTTGCTGATGCCGAGGAGATATTGACTAGGGCTTTAACCATAACAGAGGAACATTTTGGCTCTCACCATCCCAAGGTTGGTGTTGTTTTAACCTGCATAGCTCTCATGTTTCGGCGTAAAGCAATGCTAGAGCATTCTAGTTCTCTTTTGATTCAAGAGGGCCTTTATAGAAGGGCGATAGAGTTGCTGAAAGCTCCACCATTTGAGACCAAAGGTACTGAAGCAAAGGTAGATAGAAGTGATATAGTGGCCCTTGCAAGAGGCGGGTATGCAGAAGTACTTTGTGTCCAACAGAACCGAAAGGATCAAGGAGAAAAAGCGAAGAGTTGGGCAGAGGCTATATGGAGAAATCGCCGGCTGTCATTGGCCCAAGCACTGGACATATCTAATACCAATTCAGAAGTTCCAATTATAGATGCTCGAATCAGCAGGGTCCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

431

Amino Acids

46.46

Weight (kDa)

6.09

Isoelectric Point (pI)

39.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012189)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 953
AccB7I CCANNNNNTGG 1 cut(s) 1228
AccI GTMKAC 1 cut(s) 711
AciI CCGC 5 cut(s) 12, 54, 405, 774, 1116
AclWI GGATC 3 cut(s) 122, 517, 1164
AcoI YGGCCR 2 cut(s) 300, 771
AcsI RAATTY 4 cut(s) 331, 476, 668, 689
AcuI CTGAAG 2 cut(s) 131, 1092
AfaI GTAC 2 cut(s) 1069, 1131
AfiI CCNNNNNNNGG 5 cut(s) 63, 254, 925, 929, 1228
AflII CTTAAG 1 cut(s) 620
AflIII ACRYGT 1 cut(s) 815
AgeI ACCGGT 1 cut(s) 641
AgsI TTSAA 6 cut(s) 80, 282, 368, 387, 728, 1007
AhlI ACTAGT 1 cut(s) 100
AjnI CCWGG 3 cut(s) 176, 505, 630
AjuI GAANNNNNNNTTGG 2 cut(s) 680, 712
AluBI AGCT 9 cut(s) 22, 32, 61, 381, 574, 599, 832, 953, 1046
AluI AGCT 9 cut(s) 22, 32, 61, 381, 574, 599, 832, 953, 1046
Alw21I GWGCWC 1 cut(s) 468
Alw26I GTCTC 1 cut(s) 1052
AlwI GGATC 3 cut(s) 122, 517, 1164
Ama87I CYCGRG 1 cut(s) 62
AoxI GGCC 6 cut(s) 65, 300, 771, 1012, 1101, 1218
ApaI GGGCCC 1 cut(s) 69
ApeKI GCWGC 2 cut(s) 650, 809
ApoI RAATTY 4 cut(s) 331, 476, 668, 689
AsiGI ACCGGT 1 cut(s) 641
AspS9I GGNCC 8 cut(s) 65, 66, 180, 262, 1012, 1102, 1219, 1285
AsuHPI GGTGA 6 cut(s) 78, 284, 505, 631, 780, 908
AvaI CYCGRG 1 cut(s) 62
AvaII GGWCC 3 cut(s) 180, 262, 1285
BaeGI GKGCMC 1 cut(s) 69
BalI TGGCCA 1 cut(s) 302
BanII GRGCYC 1 cut(s) 69
BauI CACGAG 2 cut(s) 27, 543
Bbv12I GWGCWC 1 cut(s) 468
BbvI GCAGC 2 cut(s) 637, 796
BccI CCATC 2 cut(s) 104, 927
BceAI ACGGC 1 cut(s) 136
BcgI CGANNNNNNTGC 2 cut(s) 1018, 1052
BciT130I CCWGG 3 cut(s) 178, 507, 632
BclI TGATCA 1 cut(s) 153
BcoDI GTCTC 1 cut(s) 1052
BcuI ACTAGT 1 cut(s) 100
BfaI CTAG 5 cut(s) 101, 549, 879, 980, 990
BfrI CTTAAG 1 cut(s) 620
BfuAI ACCTGC 1 cut(s) 953
BglI GCCNNNNNGGC 1 cut(s) 413
BisI GCNGC 4 cut(s) 405, 651, 774, 810
BlsI GCNGC 4 cut(s) 406, 652, 775, 811
BmcAI AGTACT 1 cut(s) 1131
Bme1390I CCNGG 3 cut(s) 178, 507, 632
Bme18I GGWCC 3 cut(s) 180, 262, 1285
BmeT110I CYCGRG 1 cut(s) 62
BmgT120I GGNCC 8 cut(s) 65, 66, 180, 262, 1012, 1102, 1219, 1285
BmiI GGNNCC 4 cut(s) 67, 182, 264, 1286
BmrFI CCNGG 3 cut(s) 178, 507, 632
BmsI GCATC 2 cut(s) 850, 1258
BpuEI CTTGAG 1 cut(s) 854
BsaI GGTCTC 1 cut(s) 1052
BsaJI CCNNGG 4 cut(s) 408, 580, 864, 924
BsaWI WCCGGW 1 cut(s) 641
Bsc4I CCNNNNNNNGG 5 cut(s) 63, 254, 925, 929, 1228
Bse118I RCCGGY 2 cut(s) 641, 1206
Bse1I ACTGG 1 cut(s) 1233
Bse3DI GCAATG 2 cut(s) 351, 981
BseBI CCWGG 3 cut(s) 178, 507, 632
BseDI CCNNGG 4 cut(s) 408, 580, 864, 924
BseGI GGATG 3 cut(s) 454, 712, 919
BseLI CCNNNNNNNGG 5 cut(s) 63, 254, 925, 929, 1228
BseMI GCAATG 2 cut(s) 351, 981
BseMII CTCAG 3 cut(s) 257, 519, 591
BseNI ACTGG 1 cut(s) 1233
BseRI GAGGAG 1 cut(s) 881
BseSI GKGCMC 1 cut(s) 69
BseXI GCAGC 2 cut(s) 637, 796
BseYI CCCAGC 1 cut(s) 32
BshFI GGCC 6 cut(s) 67, 302, 773, 1014, 1103, 1220
BshTI ACCGGT 1 cut(s) 641
BsiHKAI GWGCWC 1 cut(s) 468
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 2 cut(s) 642, 1207
BslFI GGGAC 2 cut(s) 166, 840
BslI CCNNNNNNNGG 5 cut(s) 63, 254, 925, 929, 1228
BsmAI GTCTC 1 cut(s) 1052
BsmFI GGGAC 2 cut(s) 166, 840
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 6 cut(s) 67, 302, 773, 1014, 1103, 1220
Bso31I GGTCTC 1 cut(s) 1052
BsoBI CYCGRG 1 cut(s) 62
Bsp120I GGGCCC 1 cut(s) 65
Bsp1286I GDGCHC 2 cut(s) 69, 468
Bsp143I GATC 5 cut(s) 83, 114, 153, 509, 1156
Bsp19I CCATGG 1 cut(s) 580
BspACI CCGC 5 cut(s) 12, 54, 405, 774, 1116
BspANI GGCC 6 cut(s) 67, 302, 773, 1014, 1103, 1220
BspCNI CTCAG 3 cut(s) 256, 520, 592
BspLI GGNNCC 4 cut(s) 67, 182, 264, 1286
BspMI ACCTGC 1 cut(s) 953
BspPI GGATC 3 cut(s) 122, 517, 1164
BspQI GCTCTTC 1 cut(s) 150
BspTI CTTAAG 1 cut(s) 620
BspTNI GGTCTC 1 cut(s) 1052
BsrDI GCAATG 2 cut(s) 351, 981
BsrFI RCCGGY 2 cut(s) 641, 1206
BsrI ACTGG 1 cut(s) 1233
BssAI RCCGGY 2 cut(s) 641, 1206
BssECI CCNNGG 4 cut(s) 408, 580, 864, 924
BssMI GATC 5 cut(s) 83, 114, 153, 509, 1156
BssSI CACGAG 2 cut(s) 27, 543
BssT1I CCWWGG 3 cut(s) 408, 580, 924
Bst2BI CACGAG 2 cut(s) 27, 543
Bst2UI CCWGG 3 cut(s) 178, 507, 632
Bst4CI ACNGT 5 cut(s) 43, 93, 231, 489, 592
Bst6I CTCTTC 2 cut(s) 150, 1169
BstAFI CTTAAG 1 cut(s) 620
BstC8I GCNNGC 2 cut(s) 468, 1208
BstDEI CTNAG 5 cut(s) 243, 433, 481, 528, 600
BstDSI CCRYGG 1 cut(s) 580
BstF5I GGATG 3 cut(s) 454, 712, 919
BstKTI GATC 5 cut(s) 86, 117, 156, 512, 1159
BstMAI GTCTC 1 cut(s) 1052
BstMBI GATC 5 cut(s) 83, 114, 153, 509, 1156
BstMWI GCNNNNNNNGC 6 cut(s) 44, 53, 413, 571, 773, 818
BstNI CCWGG 3 cut(s) 178, 507, 632
BstNSI RCATGY 3 cut(s) 542, 680, 819
BstSCI CCNGG 3 cut(s) 176, 505, 630
BstSLI GKGCMC 1 cut(s) 69
BstV1I GCAGC 2 cut(s) 637, 796
BstX2I RGATCY 1 cut(s) 509
BstYI RGATCY 1 cut(s) 509
BsuRI GGCC 6 cut(s) 67, 302, 773, 1014, 1103, 1220
BtgI CCRYGG 1 cut(s) 580
BtsCI GGATG 3 cut(s) 454, 712, 919
BtsIMutI CAGTG 3 cut(s) 236, 468, 1226
BveI ACCTGC 1 cut(s) 953
Cac8I GCNNGC 2 cut(s) 468, 1208
Cfr10I RCCGGY 2 cut(s) 641, 1206
Cfr13I GGNCC 8 cut(s) 65, 66, 180, 262, 1012, 1102, 1219, 1285
CseI GACGC 1 cut(s) 669
Csp6I GTAC 2 cut(s) 1068, 1130
CspAI ACCGGT 1 cut(s) 641
CviAII CATG 7 cut(s) 173, 304, 539, 581, 677, 816, 958
CviQI GTAC 2 cut(s) 1068, 1130
DdeI CTNAG 5 cut(s) 243, 433, 481, 528, 600
DpnI GATC 5 cut(s) 85, 116, 155, 511, 1158
DpnII GATC 5 cut(s) 83, 114, 153, 509, 1156
EaeI YGGCCR 2 cut(s) 300, 771
Eam1104I CTCTTC 2 cut(s) 150, 1169
EarI CTCTTC 2 cut(s) 150, 1169
Eco130I CCWWGG 3 cut(s) 408, 580, 924
Eco24I GRGCYC 1 cut(s) 69
Eco31I GGTCTC 1 cut(s) 1052
Eco47I GGWCC 3 cut(s) 180, 262, 1285
Eco57I CTGAAG 2 cut(s) 131, 1092
Eco88I CYCGRG 1 cut(s) 62
EcoO109I RGGNCCY 5 cut(s) 66, 180, 262, 1012, 1285
EcoRI GAATTC 1 cut(s) 668
EcoRII CCWGG 3 cut(s) 176, 505, 630
EcoT14I CCWWGG 3 cut(s) 408, 580, 924
EcoT22I ATGCAT 1 cut(s) 769
EcoT38I GRGCYC 1 cut(s) 69
ErhI CCWWGG 3 cut(s) 408, 580, 924
FaeI CATG 7 cut(s) 176, 307, 542, 584, 680, 819, 961
FalI AAGNNNNNCTT 6 cut(s) 201, 233, 789, 821, 999, 1031
FaqI GGGAC 2 cut(s) 166, 840
FatI CATG 7 cut(s) 172, 303, 538, 580, 676, 815, 957
FauI CCCGC 1 cut(s) 1109
FbaI TGATCA 1 cut(s) 153
FblI GTMKAC 1 cut(s) 711
Fnu4HI GCNGC 4 cut(s) 405, 651, 774, 810
FokI GGATG 3 cut(s) 461, 719, 906
FriOI GRGCYC 1 cut(s) 69
Fsp4HI GCNGC 4 cut(s) 405, 651, 774, 810
FspBI CTAG 5 cut(s) 101, 549, 879, 980, 990
GluI GCNGC 4 cut(s) 405, 651, 774, 810
GsaI CCCAGC 1 cut(s) 36
HaeIII GGCC 6 cut(s) 67, 302, 773, 1014, 1103, 1220
HapII CCGG 2 cut(s) 642, 1207
HgaI GACGC 1 cut(s) 669
Hin1II CATG 7 cut(s) 176, 307, 542, 584, 680, 819, 961
HinfI GANTC 7 cut(s) 4, 197, 241, 524, 602, 1003, 1275
HpaII CCGG 2 cut(s) 642, 1207
HphI GGTGA 6 cut(s) 78, 284, 505, 631, 780, 908
Hpy166II GTNNAC 3 cut(s) 106, 309, 712
Hpy188I TCNGA 5 cut(s) 150, 193, 322, 529, 1252
Hpy188III TCNNGA 5 cut(s) 27, 96, 107, 368, 1007
Hpy8I GTNNAC 3 cut(s) 106, 309, 712
HpyAV CCTTC 3 cut(s) 86, 248, 1017
HpyCH4III ACNGT 5 cut(s) 43, 93, 231, 489, 592
HpyCH4V TGCA 6 cut(s) 206, 358, 767, 948, 1109, 1124
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 53, 413, 571, 773, 818
HpyF3I CTNAG 5 cut(s) 243, 433, 481, 528, 600
Hsp92II CATG 7 cut(s) 176, 307, 542, 584, 680, 819, 961
KroI GCCGGC 1 cut(s) 1206
KroNI GCCGGC 1 cut(s) 1208
Ksp22I TGATCA 1 cut(s) 153
Kzo9I GATC 5 cut(s) 83, 114, 153, 509, 1156
LguI GCTCTTC 1 cut(s) 150
LmnI GCTCC 2 cut(s) 442, 1051
Lsp1109I GCAGC 2 cut(s) 637, 796
LweI GCATC 2 cut(s) 850, 1258
MaeI CTAG 5 cut(s) 101, 549, 879, 980, 990
MaeIII GTNAC 3 cut(s) 681, 755, 786
MalI GATC 5 cut(s) 85, 116, 155, 511, 1158
MboI GATC 5 cut(s) 83, 114, 153, 509, 1156
MboII GAAGA 3 cut(s) 137, 508, 1186
MfeI CAATTG 1 cut(s) 387
MflI RGATCY 1 cut(s) 509
MhlI GDGCHC 2 cut(s) 69, 468
MlsI TGGCCA 1 cut(s) 302
MluCI AATT 8 cut(s) 277, 331, 387, 476, 668, 689, 1246, 1260
MluNI TGGCCA 1 cut(s) 302
MlyI GAGTC 2 cut(s) 235, 611
MmeI TCCRAC 3 cut(s) 403, 420, 1165
Mox20I TGGCCA 1 cut(s) 302
Mph1103I ATGCAT 1 cut(s) 769
MroNI GCCGGC 1 cut(s) 1206
MscI TGGCCA 1 cut(s) 302
MseI TTAA 4 cut(s) 18, 621, 887, 941
MslI CAYNNNNRTG 1 cut(s) 543
Msp20I TGGCCA 1 cut(s) 302
MspA1I CMGCKG 2 cut(s) 381, 599
MspCI CTTAAG 1 cut(s) 620
MspI CCGG 2 cut(s) 642, 1207
MspR9I CCNGG 3 cut(s) 178, 507, 632
MunI CAATTG 1 cut(s) 387
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 3 cut(s) 178, 507, 632
MwoI GCNNNNNNNGC 6 cut(s) 44, 53, 413, 571, 773, 818
NaeI GCCGGC 1 cut(s) 1208
NcoI CCATGG 1 cut(s) 580
NdeII GATC 5 cut(s) 83, 114, 153, 509, 1156
NgoMIV GCCGGC 1 cut(s) 1206
NlaIII CATG 7 cut(s) 176, 307, 542, 584, 680, 819, 961
NlaIV GGNNCC 4 cut(s) 67, 182, 264, 1286
NmeAIII GCCGAG 1 cut(s) 889
NmuCI GTSAC 2 cut(s) 681, 786
NsiI ATGCAT 1 cut(s) 769
NspI RCATGY 3 cut(s) 542, 680, 819
PciI ACATGT 1 cut(s) 815
PciSI GCTCTTC 1 cut(s) 150
PctI GAATGC 1 cut(s) 985
PdiI GCCGGC 1 cut(s) 1208
PfeI GAWTC 5 cut(s) 4, 197, 524, 1003, 1275
PflMI CCANNNNNTGG 1 cut(s) 1228
PinAI ACCGGT 1 cut(s) 641
PkrI GCNGC 4 cut(s) 406, 652, 775, 811
PleI GAGTC 2 cut(s) 235, 610
PpsI GAGTC 2 cut(s) 235, 610
PpuMI RGGWCCY 3 cut(s) 180, 262, 1285
PscI ACATGT 1 cut(s) 815
Psp5II RGGWCCY 3 cut(s) 180, 262, 1285
Psp6I CCWGG 3 cut(s) 176, 505, 630
PspFI CCCAGC 1 cut(s) 32
PspGI CCWGG 3 cut(s) 176, 505, 630
PspN4I GGNNCC 4 cut(s) 67, 182, 264, 1286
PspOMI GGGCCC 1 cut(s) 65
PspPI GGNCC 8 cut(s) 65, 66, 180, 262, 1012, 1102, 1219, 1285
PspPPI RGGWCCY 3 cut(s) 180, 262, 1285
PsuI RGATCY 1 cut(s) 509
PvuII CAGCTG 2 cut(s) 381, 599
RsaI GTAC 2 cut(s) 1069, 1131
RsaNI GTAC 2 cut(s) 1068, 1130
RseI CAYNNNNRTG 1 cut(s) 543
SapI GCTCTTC 1 cut(s) 150
SaqAI TTAA 4 cut(s) 18, 621, 887, 941
SatI GCNGC 4 cut(s) 405, 651, 774, 810
Sau3AI GATC 5 cut(s) 83, 114, 153, 509, 1156
Sau96I GGNCC 8 cut(s) 65, 66, 180, 262, 1012, 1102, 1219, 1285
ScaI AGTACT 1 cut(s) 1131
SchI GAGTC 2 cut(s) 235, 611
ScrFI CCNGG 3 cut(s) 178, 507, 632
SduI GDGCHC 2 cut(s) 69, 468
SfaNI GCATC 2 cut(s) 850, 1258
SinI GGWCC 3 cut(s) 180, 262, 1285
SmiMI CAYNNNNRTG 1 cut(s) 543
SmlI CTYRAG 2 cut(s) 620, 833
SmoI CTYRAG 2 cut(s) 620, 833
SpeI ACTAGT 1 cut(s) 100
Sse9I AATT 8 cut(s) 277, 331, 387, 476, 668, 689, 1246, 1260
SsiI CCGC 5 cut(s) 12, 54, 405, 774, 1116
SspMI CTAG 5 cut(s) 101, 549, 879, 980, 990
StyD4I CCNGG 3 cut(s) 176, 505, 630
StyI CCWWGG 3 cut(s) 408, 580, 924
TaaI ACNGT 5 cut(s) 43, 93, 231, 489, 592
TaqI TCGA 4 cut(s) 49, 239, 613, 1273
TasI AATT 8 cut(s) 277, 331, 387, 476, 668, 689, 1246, 1260
TatI WGTACW 1 cut(s) 1129
TauI GCSGC 2 cut(s) 407, 776
TfiI GAWTC 5 cut(s) 4, 197, 524, 1003, 1275
Tru1I TTAA 4 cut(s) 18, 621, 887, 941
Tru9I TTAA 4 cut(s) 18, 621, 887, 941
TscAI CASTG 3 cut(s) 236, 468, 1233
TseFI GTSAC 2 cut(s) 681, 786
TseI GCWGC 2 cut(s) 650, 809
Tsp45I GTSAC 2 cut(s) 681, 786
TspDTI ATGAA 2 cut(s) 210, 354
TspRI CASTG 3 cut(s) 236, 468, 1233
Van91I CCANNNNNTGG 1 cut(s) 1228
Vha464I CTTAAG 1 cut(s) 620
VpaK11BI GGWCC 3 cut(s) 180, 262, 1285
XapI RAATTY 4 cut(s) 331, 476, 668, 689
XceI RCATGY 3 cut(s) 542, 680, 819
XcmI CCANNNNNNNNNTGG 1 cut(s) 926
XmiI GTMKAC 1 cut(s) 711
XspI CTAG 5 cut(s) 101, 549, 879, 980, 990
ZrmI AGTACT 1 cut(s) 1131
Zsp2I ATGCAT 1 cut(s) 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.