Rorug03G0079500
ERF Family

Tetratricopeptide repeat (TPR)-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0012189
Physical Location & Seq
Reverse (-)
6212758 .. 6216545
3788 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0079500.1

Sequence Viewer

Length: 2022 bp
ATGATTTCCCTTAGTTTTCTTTGTCATTCTACAATGATGAAACCCACTTGTAGAATCCTGAGTAGTATTCGAAACTCTGCGTTTTTCGGGTTCACGCCTGCTAAAATCCACAATGGGTCAGCAAAGAATGGAAATTTATCAAAGTTGTGCATCAATTTTGAGCAGAAAAGCCAATATCACACATACCCTTGTCGTTTATTAGGATTTGGGAATGTTTTGAGTGATACCCAGAAAGCCTTTTCGGTACCCAATTGGAGTTTTGGCCAATCTGGGGTTATTTCTAGGTCATTTAGAAGTAGGGGTGTTTCTGTTATTGATAGTATTGGACCCAAGGGTCGTGATTTTTCGACATCGGTGGAGACCCGGGTGAATGAGAACAACTTTGAGAGGGTTTATGTTCAGGGTGGTATTAATGTGAAGCCTTTGGTGGTGGAAAGGATTGATAAGGATGAGAATGTTGTGGGGGAGGAACAGTCTAGGATAGAGGTTGCTGATGAAAATGTGAAGAATGCGGAGGGTTTGGATGAAGCTAAGGTTCTGAGTTCTGAGAGGGAGCTTTCGGATATTGAGAAGGAAGCTTGGAAGCTGTTGAGGGATTCGCTTGTGATGTATTGTGGGAGTCCTATTGGGACTATGGCTGCAAATGATCCGAATGATAAGCAGCCATTGAATTATGATCAAGTGTTTATACGTGATTTTGTTCCATCAGCACTTGCTTTCTTGCTCAAGGGAGAAGGAGAGATTGTGAGGAACTTCCTGCTTCATACATTGCAATTGCAGAGTTGGGAAAAAACTGTTGATTGCTATAGCCCAGGGCAGGGATTGATGCCTGCAAGTTTTAAAGTTAGAACTGTGCCTCTTGATGAGAACAAGTTTGAAGAAGTTTTGGATCCAGATTTTGGTGAATCAGCTATTGGCCGTGTCGCACCTGTGGATTCTGGTTTGTGGTGGATTATTCTATTGAGGGCTTATGGAAAGATAACTGGTGACTATGGATTACAGGAAAGGGTGGATGTTCAGACAGGCTTGAAAATGATCCTGCACTTGTGTTTAACTGATGGGTTTGATATGTTTCCTTCTCTTTTAGTCACAGATGGCTCCTGTATGATAGACCGTCGGATGGGTATTCACGGTCATCCCCTCGAGATCCAAGCCTTATTTTACTCGGCTCTAAGGTGCTCCCGTGAGATGCTTGCCGTAAATGATGGATCCAAGAATTTGGTAAGGGCTATCAACAACAGACTCAGTGCTTTGTCATTCCACATCAGAGAATATTACTGGGTGGATATGAAAAAGATTAATGAGATATATCGATATAAGACAGAGGAGTACTCTACAGAAGCCACCAACAAGTTTAATATATATCCTGAACAAATTCCTATATGGTTAATGGACTGGATTCCAGAGGAAGGTGGATTCTTTATTGGCAATCTACAACCAGCTCACATGGACTTCAGGTTTTTCACTCTTGGAAATCTTTGGTCCATTGTTTCATCTTTGGGTACTCCAAAGCAAAATCAAGCTATATTGAATTTGGTTGAAGCCAAGTGGGATGATCTTGTCGGGCATATGCCACTTAAGATATGCTATCCTGCCTTGGAATATGAAGAGTGGCGTATAATCACTGGCAGTGACCCAAAGAATACCCCTTGGTCGTATCATAATGGTGGATCTTGGCCCACACTTCTGTGGCAGTTCACATTGGCATGCATCAAGATGGGCAGAACAGAACTAGCTGAAAAGGCGGTTGCTTTAGCTGAGAAGAGCCTGCGAGCTGACCGCTGGCCTGAATATTACGATACCAAAACTGGGAAATTTATTGGAAAGCAATCTCGACTTTACCAAACGTGGACCATTGCCGGGTACCTTACAACTAAGATGCTGGTGGAGAATCCAGAGAAGGCGGCCTTATTATTCTGGGAGGAAGATTACGAGCTTCTTGAGATATGTGTTTGCGCACTTAGCAAGAGTGGCCGGAAAAAGTGCTCCAGAGGTGCAGCTAGGTCTCAGATTCTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10

Protein Analysis

673

Amino Acids

76.41

Weight (kDa)

6.1

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_100 PF12899 193 - 632 1.9e-223 Alkaline and neutral invertase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012189)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G02130
fragaria_vesca FvH4_6g13250
malus_domestica MD04G1132700.v1.1 MD12G1145400.v1.1
prunus_persica Prupe.6G259100_v2.0.a1 Prupe.6G259100_v2.0.a1
pyrus_communis pycom04g12060 pycom12g13980
rosa_chinensis RchiOBHm_Chr3g0466081
rosa_laevigata RLG00000024604
rosa_multiflora Rmu_sc0005135.1_g000005 Rmu_sc0007597.1_g000006
rosa_roxburghii Rroxscaffold_6G00414810
rosa_rugosa Rorug03G0079400 Rorug03G0079500
rosa_samantha Rh3BG146600 Rh3CG147500 Rh3DG147600
rosa_wichuraiana Rw3G011850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 333
Acc16I TGCGCA 1 cut(s) 1957
Acc65I GGTACC 2 cut(s) 244, 1863
AccB1I GGYRCC 2 cut(s) 244, 1863
AccB7I CCANNNNNTGG 1 cut(s) 899
AciI CCGC 4 cut(s) 512, 1745, 1780, 1904
AclWI GGATC 8 cut(s) 641, 884, 897, 1030, 1141, 1203, 1216, 1678
AcoI YGGCCR 3 cut(s) 262, 916, 1972
AcsI RAATTY 5 cut(s) 133, 1216, 1374, 1531, 1814
AcuI CTGAAG 1 cut(s) 1438
AfaI GTAC 4 cut(s) 246, 1331, 1504, 1865
AfiI CCNNNNNNNGG 8 cut(s) 271, 817, 818, 899, 1120, 1409, 1809, 1860
AflII CTTAAG 1 cut(s) 1577
AgsI TTSAA 5 cut(s) 670, 878, 1030, 1531, 1541
AjnI CCWGG 1 cut(s) 811
AjuI GAANNNNNNNTTGG 2 cut(s) 897, 929
AleI CACNNNNGTG 1 cut(s) 1687
Alw21I GWGCWC 2 cut(s) 1181, 1988
Alw26I GTCTC 2 cut(s) 353, 2010
AlwI GGATC 8 cut(s) 641, 884, 897, 1030, 1141, 1203, 1216, 1678
Ama87I CYCGRG 2 cut(s) 363, 1142
AoxI GGCC 6 cut(s) 262, 916, 1676, 1784, 1905, 1972
ApeKI GCWGC 3 cut(s) 638, 661, 1997
ApoI RAATTY 5 cut(s) 133, 1216, 1374, 1531, 1814
AseI ATTAAT 2 cut(s) 411, 1299
Asp700I GAANNNNTTC 1 cut(s) 1374
Asp718I GGTACC 2 cut(s) 244, 1863
AspLEI GCGC 1 cut(s) 1958
AspS9I GGNCC 4 cut(s) 326, 1482, 1677, 1851
AsuC2I CCSGG 3 cut(s) 364, 365, 1861
AsuHPI GGTGA 3 cut(s) 379, 914, 998
AsuII TTCGAA 1 cut(s) 70
AvaI CYCGRG 2 cut(s) 363, 1142
AvaII GGWCC 3 cut(s) 326, 1482, 1851
BalI TGGCCA 1 cut(s) 264
BamHI GGATCC 2 cut(s) 889, 1208
BanI GGYRCC 2 cut(s) 244, 1863
Bbv12I GWGCWC 2 cut(s) 1181, 1988
BbvI GCAGC 3 cut(s) 625, 673, 2009
BccI CCATC 6 cut(s) 712, 1052, 1088, 1114, 1199, 1711
BceAI ACGGC 2 cut(s) 903, 1181
BciT130I CCWGG 1 cut(s) 813
BclI TGATCA 1 cut(s) 676
BcnI CCSGG 3 cut(s) 364, 365, 1861
BcoDI GTCTC 2 cut(s) 353, 2010
BfaI CTAG 4 cut(s) 282, 477, 1733, 2001
BfmI CTRYAG 2 cut(s) 805, 1335
BfrI CTTAAG 1 cut(s) 1577
BisI GCNGC 4 cut(s) 639, 662, 1905, 1998
BlsI GCNGC 4 cut(s) 640, 663, 1906, 1999
BmcAI AGTACT 1 cut(s) 1331
Bme1390I CCNGG 4 cut(s) 364, 365, 813, 1861
Bme18I GGWCC 3 cut(s) 326, 1482, 1851
BmeT110I CYCGRG 2 cut(s) 363, 1142
BmgT120I GGNCC 4 cut(s) 326, 1482, 1677, 1851
BmiI GGNNCC 6 cut(s) 246, 328, 891, 1099, 1210, 1865
BmrFI CCNGG 4 cut(s) 364, 365, 813, 1861
BmrI ACTGGG 2 cut(s) 1288, 1818
BmsI GCATC 5 cut(s) 159, 816, 1179, 1719, 1869
BmuI ACTGGG 2 cut(s) 1288, 1818
BplI GAGNNNNNCTC 2 cut(s) 1316, 1348
BpmI CTGGAG 1 cut(s) 1972
Bpu10I CCTNAGC 1 cut(s) 531
Bpu14I TTCGAA 1 cut(s) 70
BpuEI CTTGAG 2 cut(s) 710, 1961
BpuMI CCSGG 3 cut(s) 364, 365, 1861
Bsa29I ATCGAT 1 cut(s) 1312
BsaAI YACGTR 1 cut(s) 692
BsaI GGTCTC 2 cut(s) 353, 2010
BsaJI CCNNGG 6 cut(s) 330, 363, 811, 812, 1596, 1649
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 729, 759
Bsc4I CCNNNNNNNGG 8 cut(s) 271, 817, 818, 899, 1120, 1409, 1809, 1860
Bse1I ACTGG 5 cut(s) 988, 1283, 1400, 1630, 1813
Bse3DI GCAATG 2 cut(s) 767, 1854
BseBI CCWGG 1 cut(s) 813
BseCI ATCGAT 1 cut(s) 1312
BseDI CCNNGG 6 cut(s) 330, 363, 811, 812, 1596, 1649
BseGI GGATG 6 cut(s) 454, 529, 1018, 1125, 1135, 1558
BseLI CCNNNNNNNGG 8 cut(s) 271, 817, 818, 899, 1120, 1409, 1809, 1860
BseMI GCAATG 2 cut(s) 767, 1854
BseMII CTCAG 6 cut(s) 50, 530, 537, 1258, 1749, 2021
BseNI ACTGG 5 cut(s) 988, 1283, 1400, 1630, 1813
BseRI GAGGAG 1 cut(s) 1340
BseXI GCAGC 3 cut(s) 625, 673, 2009
BsgI GTGCAG 2 cut(s) 1025, 2016
BshFI GGCC 6 cut(s) 264, 918, 1678, 1786, 1907, 1974
BshNI GGYRCC 2 cut(s) 244, 1863
BshVI ATCGAT 1 cut(s) 1312
BsiHKAI GWGCWC 2 cut(s) 1181, 1988
BsiHKCI CYCGRG 2 cut(s) 363, 1142
BsiSI CCGG 3 cut(s) 364, 1860, 1975
BslFI GGGAC 1 cut(s) 643
BslI CCNNNNNNNGG 8 cut(s) 271, 817, 818, 899, 1120, 1409, 1809, 1860
BsmAI GTCTC 2 cut(s) 353, 2010
BsmFI GGGAC 1 cut(s) 643
BsmI GAATGC 1 cut(s) 514
BsnI GGCC 6 cut(s) 264, 918, 1678, 1786, 1907, 1974
Bso31I GGTCTC 2 cut(s) 353, 2010
BsoBI CYCGRG 2 cut(s) 363, 1142
Bsp119I TTCGAA 1 cut(s) 70
Bsp1286I GDGCHC 2 cut(s) 1181, 1988
Bsp143I GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
BspACI CCGC 4 cut(s) 512, 1745, 1780, 1904
BspANI GGCC 6 cut(s) 264, 918, 1678, 1786, 1907, 1974
BspCNI CTCAG 6 cut(s) 51, 531, 538, 1257, 1750, 2020
BspDI ATCGAT 1 cut(s) 1312
BspLI GGNNCC 6 cut(s) 246, 328, 891, 1099, 1210, 1865
BspPI GGATC 8 cut(s) 641, 884, 897, 1030, 1141, 1203, 1216, 1678
BspQI GCTCTTC 1 cut(s) 1757
BspT104I TTCGAA 1 cut(s) 70
BspT107I GGYRCC 2 cut(s) 244, 1863
BspTI CTTAAG 1 cut(s) 1577
BspTNI GGTCTC 2 cut(s) 353, 2010
BsrDI GCAATG 2 cut(s) 767, 1854
BsrI ACTGG 5 cut(s) 988, 1283, 1400, 1630, 1813
BssECI CCNNGG 6 cut(s) 330, 363, 811, 812, 1596, 1649
BssMI GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
BssT1I CCWWGG 3 cut(s) 330, 1596, 1649
Bst2UI CCWGG 1 cut(s) 813
Bst4CI ACNGT 5 cut(s) 474, 796, 853, 1115, 1133
Bst6I CTCTTC 2 cut(s) 1602, 1757
BstAFI CTTAAG 1 cut(s) 1577
BstBAI YACGTR 1 cut(s) 692
BstBI TTCGAA 1 cut(s) 70
BstC8I GCNNGC 7 cut(s) 99, 831, 1194, 1708, 1769, 1773, 1784
BstF5I GGATG 6 cut(s) 454, 529, 1018, 1125, 1135, 1558
BstHHI GCGC 1 cut(s) 1958
BstKTI GATC 8 cut(s) 649, 679, 892, 1038, 1149, 1211, 1558, 1673
BstMAI GTCTC 2 cut(s) 353, 2010
BstMBI GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
BstMWI GCNNNNNNNGC 3 cut(s) 1742, 1962, 1971
BstNI CCWGG 1 cut(s) 813
BstNSI RCATGY 1 cut(s) 1710
BstSCI CCNGG 4 cut(s) 362, 363, 811, 1859
BstSFI CTRYAG 2 cut(s) 805, 1335
BstV1I GCAGC 3 cut(s) 625, 673, 2009
BstX2I RGATCY 4 cut(s) 889, 1146, 1208, 1670
BstXI CCANNNNNNTGG 1 cut(s) 1219
BstYI RGATCY 4 cut(s) 889, 1146, 1208, 1670
Bsu15I ATCGAT 1 cut(s) 1312
BsuRI GGCC 6 cut(s) 264, 918, 1678, 1786, 1907, 1974
BsuTUI ATCGAT 1 cut(s) 1312
BtsCI GGATG 6 cut(s) 454, 529, 1018, 1125, 1135, 1558
BtsI GCAGTG 1 cut(s) 1636
BtsIMutI CAGTG 3 cut(s) 1252, 1623, 1636
Cac8I GCNNGC 7 cut(s) 99, 831, 1194, 1708, 1769, 1773, 1784
CfoI GCGC 1 cut(s) 1958
Cfr13I GGNCC 4 cut(s) 326, 1482, 1677, 1851
Cfr9I CCCGGG 1 cut(s) 363
ClaI ATCGAT 1 cut(s) 1312
Csp6I GTAC 4 cut(s) 245, 1330, 1503, 1864
CviAII CATG 2 cut(s) 1447, 1707
CviQI GTAC 4 cut(s) 245, 1330, 1503, 1864
DpnI GATC 8 cut(s) 648, 678, 891, 1037, 1148, 1210, 1557, 1672
DpnII GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
DraI TTTAAA 1 cut(s) 841
DrdI GACNNNNNNGTC 1 cut(s) 333
DseDI GACNNNNNNGTC 1 cut(s) 333
EaeI YGGCCR 3 cut(s) 262, 916, 1972
Eam1104I CTCTTC 2 cut(s) 1602, 1757
EarI CTCTTC 2 cut(s) 1602, 1757
Eco130I CCWWGG 3 cut(s) 330, 1596, 1649
Eco31I GGTCTC 2 cut(s) 353, 2010
Eco47I GGWCC 3 cut(s) 326, 1482, 1851
Eco57I CTGAAG 1 cut(s) 1438
Eco88I CYCGRG 2 cut(s) 363, 1142
EcoRII CCWGG 1 cut(s) 811
EcoT14I CCWWGG 3 cut(s) 330, 1596, 1649
EcoT22I ATGCAT 1 cut(s) 1712
ErhI CCWWGG 3 cut(s) 330, 1596, 1649
FaeI CATG 2 cut(s) 1450, 1710
FalI AAGNNNNNCTT 2 cut(s) 1892, 1924
FaqI GGGAC 1 cut(s) 643
FatI CATG 2 cut(s) 1446, 1706
FauNDI CATATG 1 cut(s) 1569
FbaI TGATCA 1 cut(s) 676
Fnu4HI GCNGC 4 cut(s) 639, 662, 1905, 1998
FokI GGATG 6 cut(s) 461, 536, 1025, 1122, 1132, 1565
Fsp4HI GCNGC 4 cut(s) 639, 662, 1905, 1998
FspBI CTAG 4 cut(s) 282, 477, 1733, 2001
FspI TGCGCA 1 cut(s) 1957
GlaI GCGC 1 cut(s) 1957
GluI GCNGC 4 cut(s) 639, 662, 1905, 1998
GsuI CTGGAG 1 cut(s) 1972
HaeIII GGCC 6 cut(s) 264, 918, 1678, 1786, 1907, 1974
HapII CCGG 3 cut(s) 364, 1860, 1975
HhaI GCGC 1 cut(s) 1958
Hin1II CATG 2 cut(s) 1450, 1710
Hin6I GCGC 1 cut(s) 1956
HinP1I GCGC 1 cut(s) 1956
HindIII AAGCTT 1 cut(s) 576
HpaII CCGG 3 cut(s) 364, 1860, 1975
HphI GGTGA 3 cut(s) 379, 914, 998
Hpy166II GTNNAC 3 cut(s) 93, 1698, 1851
Hpy188I TCNGA 8 cut(s) 540, 547, 562, 651, 1020, 1119, 1268, 2010
Hpy8I GTNNAC 3 cut(s) 93, 1698, 1851
Hpy99I CGWCG 1 cut(s) 1119
HpyAV CCTTC 5 cut(s) 565, 728, 1086, 1403, 1894
HpyCH4III ACNGT 5 cut(s) 474, 796, 853, 1115, 1133
HpyCH4IV ACGT 2 cut(s) 691, 1847
HpyCH4V TGCA 8 cut(s) 150, 641, 772, 778, 833, 1042, 1710, 1997
HpyF10VI GCNNNNNNNGC 3 cut(s) 1742, 1962, 1971
HpySE526I ACGT 2 cut(s) 691, 1847
Hsp92II CATG 2 cut(s) 1450, 1710
HspAI GCGC 1 cut(s) 1956
KpnI GGTACC 2 cut(s) 248, 1867
Ksp22I TGATCA 1 cut(s) 676
Kzo9I GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
LguI GCTCTTC 1 cut(s) 1757
LmnI GCTCC 4 cut(s) 553, 1103, 1184, 1991
Lsp1109I GCAGC 3 cut(s) 625, 673, 2009
LweI GCATC 5 cut(s) 159, 816, 1179, 1719, 1869
MaeI CTAG 4 cut(s) 282, 477, 1733, 2001
MaeII ACGT 2 cut(s) 691, 1847
MaeIII GTNAC 3 cut(s) 986, 1087, 1631
MalI GATC 8 cut(s) 648, 678, 891, 1037, 1148, 1210, 1557, 1672
MboI GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
MboII GAAGA 5 cut(s) 517, 890, 1619, 1774, 1937
MfeI CAATTG 2 cut(s) 250, 773
MflI RGATCY 4 cut(s) 889, 1146, 1208, 1670
MhlI GDGCHC 2 cut(s) 1181, 1988
MlsI TGGCCA 1 cut(s) 264
MluCI AATT 9 cut(s) 133, 154, 250, 670, 773, 1216, 1374, 1531, 1814
MluNI TGGCCA 1 cut(s) 264
MlyI GAGTC 2 cut(s) 628, 1236
MmeI TCCRAC 1 cut(s) 1097
Mox20I TGGCCA 1 cut(s) 264
Mph1103I ATGCAT 1 cut(s) 1712
MroXI GAANNNNTTC 1 cut(s) 1374
MscI TGGCCA 1 cut(s) 264
MseI TTAA 7 cut(s) 411, 840, 1052, 1299, 1356, 1388, 1578
MslI CAYNNNNRTG 4 cut(s) 1665, 1687, 1705, 1715
Msp20I TGGCCA 1 cut(s) 264
MspA1I CMGCKG 1 cut(s) 1782
MspCI CTTAAG 1 cut(s) 1577
MspI CCGG 3 cut(s) 364, 1860, 1975
MspR9I CCNGG 4 cut(s) 364, 365, 813, 1861
MunI CAATTG 2 cut(s) 250, 773
Mva1269I GAATGC 1 cut(s) 514
MvaI CCWGG 1 cut(s) 813
MwoI GCNNNNNNNGC 3 cut(s) 1742, 1962, 1971
NciI CCSGG 3 cut(s) 364, 365, 1861
NdeI CATATG 1 cut(s) 1569
NdeII GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
NlaIII CATG 2 cut(s) 1450, 1710
NlaIV GGNNCC 6 cut(s) 246, 328, 891, 1099, 1210, 1865
NmeAIII GCCGAG 1 cut(s) 1145
NmuCI GTSAC 3 cut(s) 986, 1087, 1631
NsbI TGCGCA 1 cut(s) 1957
NsiI ATGCAT 1 cut(s) 1712
NspI RCATGY 1 cut(s) 1710
NspV TTCGAA 1 cut(s) 70
OliI CACNNNNGTG 1 cut(s) 1687
PaeI GCATGC 1 cut(s) 1710
PaeR7I CTCGAG 1 cut(s) 1142
PasI CCCWGGG 1 cut(s) 812
PciSI GCTCTTC 1 cut(s) 1757
PctI GAATGC 1 cut(s) 514
PdmI GAANNNNTTC 1 cut(s) 1374
PfeI GAWTC 8 cut(s) 54, 596, 905, 935, 1399, 1416, 1891, 2011
PflMI CCANNNNNTGG 1 cut(s) 899
PkrI GCNGC 4 cut(s) 640, 663, 1906, 1999
PleI GAGTC 2 cut(s) 627, 1236
PpsI GAGTC 2 cut(s) 627, 1236
Ppu21I YACGTR 1 cut(s) 692
PshBI ATTAAT 2 cut(s) 411, 1299
Psp6I CCWGG 1 cut(s) 811
PspGI CCWGG 1 cut(s) 811
PspN4I GGNNCC 6 cut(s) 246, 328, 891, 1099, 1210, 1865
PspPI GGNCC 4 cut(s) 326, 1482, 1677, 1851
PsuI RGATCY 4 cut(s) 889, 1146, 1208, 1670
RsaI GTAC 4 cut(s) 246, 1331, 1504, 1865
RsaNI GTAC 4 cut(s) 245, 1330, 1503, 1864
RseI CAYNNNNRTG 4 cut(s) 1665, 1687, 1705, 1715
SapI GCTCTTC 1 cut(s) 1757
SaqAI TTAA 7 cut(s) 411, 840, 1052, 1299, 1356, 1388, 1578
SatI GCNGC 4 cut(s) 639, 662, 1905, 1998
Sau3AI GATC 8 cut(s) 646, 676, 889, 1035, 1146, 1208, 1555, 1670
Sau96I GGNCC 4 cut(s) 326, 1482, 1677, 1851
ScaI AGTACT 1 cut(s) 1331
SchI GAGTC 2 cut(s) 628, 1236
ScrFI CCNGG 4 cut(s) 364, 365, 813, 1861
SduI GDGCHC 2 cut(s) 1181, 1988
SfaNI GCATC 5 cut(s) 159, 816, 1179, 1719, 1869
SfcI CTRYAG 2 cut(s) 805, 1335
Sfr274I CTCGAG 1 cut(s) 1142
SfuI TTCGAA 1 cut(s) 70
SinI GGWCC 3 cut(s) 326, 1482, 1851
SlaI CTCGAG 1 cut(s) 1142
SmaI CCCGGG 1 cut(s) 365
SmiMI CAYNNNNRTG 4 cut(s) 1665, 1687, 1705, 1715
SmlI CTYRAG 4 cut(s) 725, 1142, 1577, 1940
SmoI CTYRAG 4 cut(s) 725, 1142, 1577, 1940
SphI GCATGC 1 cut(s) 1710
Sse9I AATT 9 cut(s) 133, 154, 250, 670, 773, 1216, 1374, 1531, 1814
SsiI CCGC 4 cut(s) 512, 1745, 1780, 1904
SspI AATATT 2 cut(s) 1274, 1793
SspMI CTAG 4 cut(s) 282, 477, 1733, 2001
StyD4I CCNGG 4 cut(s) 362, 363, 811, 1859
StyI CCWWGG 3 cut(s) 330, 1596, 1649
TaaI ACNGT 5 cut(s) 474, 796, 853, 1115, 1133
TaiI ACGT 2 cut(s) 694, 1850
TaqI TCGA 5 cut(s) 70, 347, 1143, 1312, 1834
TasI AATT 9 cut(s) 133, 154, 250, 670, 773, 1216, 1374, 1531, 1814
TatI WGTACW 1 cut(s) 1329
TauI GCSGC 1 cut(s) 1907
TfiI GAWTC 8 cut(s) 54, 596, 905, 935, 1399, 1416, 1891, 2011
Tru1I TTAA 7 cut(s) 411, 840, 1052, 1299, 1356, 1388, 1578
Tru9I TTAA 7 cut(s) 411, 840, 1052, 1299, 1356, 1388, 1578
TscAI CASTG 3 cut(s) 1252, 1630, 1636
TseFI GTSAC 3 cut(s) 986, 1087, 1631
TseI GCWGC 3 cut(s) 638, 661, 1997
Tsp45I GTSAC 3 cut(s) 986, 1087, 1631
TspDTI ATGAA 7 cut(s) 53, 510, 540, 752, 1304, 1482, 1620
TspMI CCCGGG 1 cut(s) 363
TspRI CASTG 3 cut(s) 1252, 1630, 1636
Van91I CCANNNNNTGG 1 cut(s) 899
Vha464I CTTAAG 1 cut(s) 1577
VpaK11BI GGWCC 3 cut(s) 326, 1482, 1851
VspI ATTAAT 2 cut(s) 411, 1299
XapI RAATTY 5 cut(s) 133, 1216, 1374, 1531, 1814
XceI RCATGY 1 cut(s) 1710
XhoI CTCGAG 1 cut(s) 1142
XmaI CCCGGG 1 cut(s) 363
XmnI GAANNNNTTC 1 cut(s) 1374
XspI CTAG 4 cut(s) 282, 477, 1733, 2001
ZrmI AGTACT 1 cut(s) 1331
Zsp2I ATGCAT 1 cut(s) 1712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.