Rorug03G0079400
ERF Family

Tetratricopeptide repeat (TPR)-like superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0012189
Physical Location & Seq
Forward (+)
6208552 .. 6212270
3719 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0079400.1

Sequence Viewer

Length: 1950 bp
ATGGCAGACTTGGAAAATTTGCTCCTTGAGGCAGCAGGACGAACCAGTGCAGCTGTGAAAAACCGGCACCAACTTCCACATTCTAGAAAGCGACATGGAGGTTCCTTCTCTGATGATGAAAGTGACTCTGGGGATGAAGACTCAGATGGTGGTCGTAGTTATGCAAGCAAGAAGCCCTCTCAAGTACCTCTGAAGAAGAGGTTTGACCCTGCTGAAAGAGGCAGTGACGAAGAGCACGTTGATGATTCTGATCATGAGAGCGAAAACAGTGATGAATCTGATATTGGCCCTGATCTCTACAAGGATGATGCTGATCGGAGACGGCTTTCAGAGTTGACTGAACTTGAAAGAGAGATGATCTTGACAAATAGAGCAGAAAAGAAAGATGGTAAGAAGTTTATGGAAAATTTAAGATCAAAGAGAGACAAAGAAAGATCTATCCAATCAAAGAAAGAAACTTCTTCTGTCCCATTGTCCCGTGGTGTACGCTCATCAGCTAGGACTGCTGAGAAATCAGCTGCTTTGGATGATGCATTGAGTCAGTTACGAGAAAAGCGTCTGAAGCAACAAGACTTGAAGGCTCGCTATAATCTGAGGGACTCATCAAAAGGAAGTGTAGGTAGCCAGGATATTTCACCAATCAAGCGTAAATCCCTTGTTGCACCAAGTCTGATTGACTCTGATCAAAATGAGAATGCTGAGGGGTTACAAACTGAAGAAGTAGCATCAGCTTGGGATGATGACTCGTTGGATAGCGATGAGGAAAGGTTAGAACCGCCAACATATCAGGACATAAAGGACATTACCATTCCAAGGTCGAAACTTGCAAAATGGTGTATGGAACCATTTTTTGAGGAGTTAATTGTGGGTTGCTTTGTTAGGGTTGGATTTGGGAAATCATCAAGTGGTCCAGTCTACAGGCTTTGCATGGTTCAGAACGTGGATGCCACTGATTTTAACCGGCGGTACCAGCTAGAGGGAAAAATGACACATAAATATTTGAACTGTGTTTGGGGCAGTGAAAATTCTGCTTCCAAGTGGCAGATGGCTATGGTCTCAAATTCTGCTCCGGAGGAGGAGGAATTTAACGATTGGATTAGGGAAGTGAAGTGTAGTGCTGGCTACATGCCAAGCAAACAGGATGTATTAGAAAAGAGGGAGACCCTACAGAAATCCAACACATTTGTTTACTCAGCAACAACTGTGAAGCAAATGTTGCAGGAGAAAAAAGCCTCAGCAAGACCGGTGAACATTGCAGTTGAGAAGGATAGGTTGAGGAGGCAGTTGGAAGTTGCAGAAAGCAAGTGTGATGAGGAGGAAGTTGGGAGGATTAAGACAAGGCTCCTGGAATTGGAAGCATCCAGGCAATTCCAGGAGAAAGATTCCAAGGCTATTAGGTTAGCTGAGATGAACAGGAAGAACAGGTTTGAGAACTTTAAGAATGCATCTGGATTGAAACCAACAAATACGAATCTTAAAGCTGGGGAGGCCGGTTATGATCCTTTCTCAAGAAGATGGACTAGATCGAGGAATTACTATGTTAGAAAGACTGGAGGAGGAGATGAAGCCGCTGAAGATGAAACTGCTGAGGCAGCAAATGGAACTCTAGGTACAACCGATAACAAGGCAGAAGCAAAAGTAATGGGAAAGTTTGGCATGACAGCAACAACGGTAGCGTTGGAAGCTGCAGCAGGTGCAGGGAAGTTGGTTGATACAAGTGCTCCTGTGGACAGAGCGACAGAGTCATATACACTGCACAATTTCGAGCTGCCAATCTCGTTGGCTGCACTTCAGAAGTTTGGTGGATATCATGGTGCTCCGGCTGCATACTTGGCGAGGAAACAAAAGATAGAAGCAACTGTAGGGTACCAAGTCCCGGAGGATGATGGCAGGAGACATGCTTTGACATTGACAGTTAGTGACTATAAGAGAAGAAGAGGGCTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10

Protein Analysis

649

Amino Acids

72.81

Weight (kDa)

6.16

Isoelectric Point (pI)

54.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Plus-3 PF03126 264 - 369 6e-31 Plus-3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012189)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G02130
fragaria_vesca FvH4_6g13250
malus_domestica MD04G1132700.v1.1 MD12G1145400.v1.1
prunus_persica Prupe.6G259100_v2.0.a1 Prupe.6G259100_v2.0.a1
pyrus_communis pycom04g12060 pycom12g13980
rosa_chinensis RchiOBHm_Chr3g0466081
rosa_laevigata RLG00000024604
rosa_multiflora Rmu_sc0005135.1_g000005 Rmu_sc0007597.1_g000006
rosa_roxburghii Rroxscaffold_6G00414810
rosa_rugosa Rorug03G0079400 Rorug03G0079500
rosa_samantha Rh3BG146600 Rh3CG147500 Rh3DG147600
rosa_wichuraiana Rw3G011850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1682
Acc36I ACCTGC 1 cut(s) 1682
Acc65I GGTACC 2 cut(s) 966, 1866
AccB1I GGYRCC 3 cut(s) 66, 966, 1866
AccI GTMKAC 1 cut(s) 915
AccIII TCCGGA 1 cut(s) 1069
AciI CCGC 3 cut(s) 776, 964, 1569
AclWI GGATC 1 cut(s) 1493
AcsI RAATTY 5 cut(s) 16, 406, 1024, 1060, 1082
AcuI CTGAAG 5 cut(s) 212, 581, 735, 1593, 1775
AfaI GTAC 5 cut(s) 186, 486, 968, 1612, 1868
AfiI CCNNNNNNNGG 4 cut(s) 813, 976, 1351, 1876
AgeI ACCGGT 1 cut(s) 1243
AgsI TTSAA 4 cut(s) 347, 577, 1003, 1456
AjnI CCWGG 4 cut(s) 624, 1344, 1361, 1371
AjuI GAANNNNNNNTTGG 2 cut(s) 267, 299
AluBI AGCT 9 cut(s) 53, 497, 518, 731, 973, 1403, 1481, 1685, 1768
AluI AGCT 9 cut(s) 53, 497, 518, 731, 973, 1403, 1481, 1685, 1768
Alw21I GWGCWC 3 cut(s) 237, 1723, 1819
Alw26I GTCTC 5 cut(s) 313, 417, 1060, 1154, 1888
AlwI GGATC 1 cut(s) 1493
Aor13HI TCCGGA 1 cut(s) 1069
AoxI GGCC 2 cut(s) 286, 1488
ApeKI GCWGC 9 cut(s) 32, 50, 518, 1592, 1685, 1688, 1768, 1784, 1823
ApoI RAATTY 5 cut(s) 16, 406, 1024, 1060, 1082
AsiGI ACCGGT 1 cut(s) 1243
Asp718I GGTACC 2 cut(s) 966, 1866
AspS9I GGNCC 2 cut(s) 287, 908
AsuC2I CCSGG 1 cut(s) 1877
AsuHPI GGTGA 2 cut(s) 627, 1258
AvaII GGWCC 1 cut(s) 908
BanI GGYRCC 3 cut(s) 66, 966, 1866
BbsI GAAGAC 1 cut(s) 144
Bbv12I GWGCWC 3 cut(s) 237, 1723, 1819
BbvCI CCTCAGC 3 cut(s) 699, 1234, 1587
BbvI GCAGC 9 cut(s) 44, 62, 505, 1604, 1672, 1700, 1755, 1771, 1810
BccI CCATC 5 cut(s) 140, 380, 1039, 1509, 1880
BceAI ACGGC 1 cut(s) 338
BciT130I CCWGG 4 cut(s) 626, 1346, 1363, 1373
BclI TGATCA 2 cut(s) 250, 682
BcnI CCSGG 1 cut(s) 1877
BcoDI GTCTC 5 cut(s) 313, 417, 1060, 1154, 1888
BfaI CTAG 5 cut(s) 84, 498, 974, 1521, 1607
BfmI CTRYAG 4 cut(s) 916, 1166, 1686, 1860
BfuAI ACCTGC 1 cut(s) 1682
BglII AGATCT 1 cut(s) 434
Bme1390I CCNGG 5 cut(s) 626, 1346, 1363, 1373, 1877
Bme18I GGWCC 1 cut(s) 908
BmgT120I GGNCC 2 cut(s) 287, 908
BmiI GGNNCC 6 cut(s) 68, 103, 843, 968, 1343, 1868
BmrFI CCNGG 5 cut(s) 626, 1346, 1363, 1373, 1877
BmsI GCATC 6 cut(s) 298, 520, 734, 934, 1367, 1454
BpiI GAAGAC 1 cut(s) 144
BplI GAGNNNNNCTC 1 cut(s) 1929
BpmI CTGGAG 1 cut(s) 1572
Bpu10I CCTNAGC 3 cut(s) 699, 1234, 1587
BpuEI CTTGAG 3 cut(s) 47, 165, 1492
BpuMI CCSGG 1 cut(s) 1877
BsaBI GATNNNNATC 2 cut(s) 249, 312
BsaI GGTCTC 2 cut(s) 1060, 1154
BsaJI CCNNGG 3 cut(s) 478, 812, 1386
BsaWI WCCGGW 2 cut(s) 1069, 1243
BsaXI ACNNNNNCTCC 2 cut(s) 1705, 1735
Bsc4I CCNNNNNNNGG 4 cut(s) 813, 976, 1351, 1876
Bse118I RCCGGY 4 cut(s) 63, 960, 1243, 1490
Bse1I ACTGG 3 cut(s) 45, 911, 1555
Bse3DI GCAATG 1 cut(s) 1251
Bse8I GATNNNNATC 2 cut(s) 249, 312
BseAI TCCGGA 1 cut(s) 1069
BseBI CCWGG 4 cut(s) 626, 1346, 1363, 1373
BseDI CCNNGG 3 cut(s) 478, 812, 1386
BseGI GGATG 8 cut(s) 139, 310, 532, 742, 949, 1147, 1358, 1888
BseJI GATNNNNATC 2 cut(s) 249, 312
BseLI CCNNNNNNNGG 4 cut(s) 813, 976, 1351, 1876
BseMI GCAATG 1 cut(s) 1251
BseMII CTCAG 8 cut(s) 156, 498, 584, 690, 1206, 1248, 1395, 1578
BseNI ACTGG 3 cut(s) 45, 911, 1555
BseRI GAGGAG 7 cut(s) 869, 1088, 1091, 1291, 1328, 1569, 1572
BseXI GCAGC 9 cut(s) 44, 62, 505, 1604, 1672, 1700, 1755, 1771, 1810
BseYI CCCAGC 1 cut(s) 1481
BsgI GTGCAG 4 cut(s) 69, 1716, 1739, 1770
BshFI GGCC 2 cut(s) 288, 1490
BshNI GGYRCC 3 cut(s) 66, 966, 1866
BshTI ACCGGT 1 cut(s) 1243
BsiHKAI GWGCWC 3 cut(s) 237, 1723, 1819
BsiSI CCGG 7 cut(s) 64, 961, 1070, 1244, 1491, 1820, 1877
BslFI GGGAC 4 cut(s) 452, 460, 611, 1859
BslI CCNNNNNNNGG 4 cut(s) 813, 976, 1351, 1876
BsmAI GTCTC 5 cut(s) 313, 417, 1060, 1154, 1888
BsmBI CGTCTC 1 cut(s) 313
BsmFI GGGAC 4 cut(s) 452, 460, 611, 1859
BsmI GAATGC 2 cut(s) 700, 1447
BsnI GGCC 2 cut(s) 288, 1490
Bso31I GGTCTC 2 cut(s) 1060, 1154
Bsp1286I GDGCHC 3 cut(s) 237, 1723, 1819
Bsp13I TCCGGA 1 cut(s) 1069
Bsp143I GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
BspACI CCGC 3 cut(s) 776, 964, 1569
BspANI GGCC 2 cut(s) 288, 1490
BspCNI CTCAG 8 cut(s) 155, 499, 585, 691, 1205, 1247, 1396, 1579
BspEI TCCGGA 1 cut(s) 1069
BspHI TCATGA 1 cut(s) 253
BspLI GGNNCC 6 cut(s) 68, 103, 843, 968, 1343, 1868
BspMAI CTGCAG 1 cut(s) 1690
BspMI ACCTGC 1 cut(s) 1682
BspPI GGATC 1 cut(s) 1493
BspQI GCTCTTC 1 cut(s) 225
BspT107I GGYRCC 3 cut(s) 66, 966, 1866
BspTNI GGTCTC 2 cut(s) 1060, 1154
BsrDI GCAATG 1 cut(s) 1251
BsrFI RCCGGY 4 cut(s) 63, 960, 1243, 1490
BsrI ACTGG 3 cut(s) 45, 911, 1555
BssAI RCCGGY 4 cut(s) 63, 960, 1243, 1490
BssECI CCNNGG 3 cut(s) 478, 812, 1386
BssMI GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
BssT1I CCWWGG 2 cut(s) 812, 1386
Bst2UI CCWGG 4 cut(s) 626, 1346, 1363, 1373
Bst4CI ACNGT 6 cut(s) 269, 1007, 1204, 1672, 1861, 1915
Bst6I CTCTTC 3 cut(s) 191, 225, 1930
BstAPI GCANNNNNTGC 2 cut(s) 1216, 1694
BstC8I GCNNGC 3 cut(s) 166, 583, 1120
BstDEI CTNAG 8 cut(s) 142, 507, 593, 699, 1192, 1234, 1404, 1587
BstDSI CCRYGG 1 cut(s) 478
BstF5I GGATG 8 cut(s) 139, 310, 532, 742, 949, 1147, 1358, 1888
BstKTI GATC 9 cut(s) 253, 295, 316, 360, 416, 437, 685, 1501, 1526
BstMAI GTCTC 5 cut(s) 313, 417, 1060, 1154, 1888
BstMBI GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
BstNI CCWGG 4 cut(s) 626, 1346, 1363, 1373
BstNSI RCATGY 2 cut(s) 1129, 1901
BstSCI CCNGG 5 cut(s) 624, 1344, 1361, 1371, 1875
BstSFI CTRYAG 4 cut(s) 916, 1166, 1686, 1860
BstV1I GCAGC 9 cut(s) 44, 62, 505, 1604, 1672, 1700, 1755, 1771, 1810
BstV2I GAAGAC 1 cut(s) 144
BstX2I RGATCY 1 cut(s) 434
BstYI RGATCY 1 cut(s) 434
BsuRI GGCC 2 cut(s) 288, 1490
BtgI CCRYGG 1 cut(s) 478
BtgZI GCGATG 1 cut(s) 771
BtsCI GGATG 8 cut(s) 139, 310, 532, 742, 949, 1147, 1358, 1888
BtsI GCAGTG 3 cut(s) 229, 1024, 1751
BtsIMutI CAGTG 6 cut(s) 52, 229, 274, 948, 1024, 1751
BveI ACCTGC 1 cut(s) 1682
Cac8I GCNNGC 3 cut(s) 166, 583, 1120
CciI TCATGA 1 cut(s) 253
Cfr10I RCCGGY 4 cut(s) 63, 960, 1243, 1490
Cfr13I GGNCC 2 cut(s) 287, 908
CseI GACGC 1 cut(s) 545
Csp6I GTAC 5 cut(s) 185, 485, 967, 1611, 1867
CspAI ACCGGT 1 cut(s) 1243
CviAII CATG 7 cut(s) 95, 254, 928, 1126, 1657, 1811, 1898
CviQI GTAC 5 cut(s) 185, 485, 967, 1611, 1867
DdeI CTNAG 8 cut(s) 142, 507, 593, 699, 1192, 1234, 1404, 1587
DpnI GATC 9 cut(s) 252, 294, 315, 359, 415, 436, 684, 1500, 1525
DpnII GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
Eam1104I CTCTTC 3 cut(s) 191, 225, 1930
EarI CTCTTC 3 cut(s) 191, 225, 1930
Eco130I CCWWGG 2 cut(s) 812, 1386
Eco31I GGTCTC 2 cut(s) 1060, 1154
Eco32I GATATC 1 cut(s) 1808
Eco47I GGWCC 1 cut(s) 908
Eco57I CTGAAG 5 cut(s) 212, 581, 735, 1593, 1775
EcoRII CCWGG 4 cut(s) 624, 1344, 1361, 1371
EcoRV GATATC 1 cut(s) 1808
EcoT14I CCWWGG 2 cut(s) 812, 1386
EcoT22I ATGCAT 2 cut(s) 535, 1447
ErhI CCWWGG 2 cut(s) 812, 1386
Esp3I CGTCTC 1 cut(s) 313
FaeI CATG 7 cut(s) 98, 257, 931, 1129, 1660, 1814, 1901
FaqI GGGAC 4 cut(s) 452, 460, 611, 1859
FatI CATG 7 cut(s) 94, 253, 927, 1125, 1656, 1810, 1897
FbaI TGATCA 2 cut(s) 250, 682
FblI GTMKAC 1 cut(s) 915
FokI GGATG 8 cut(s) 146, 317, 539, 749, 956, 1154, 1345, 1895
FspBI CTAG 5 cut(s) 84, 498, 974, 1521, 1607
GsaI CCCAGC 1 cut(s) 1485
GsuI CTGGAG 1 cut(s) 1572
HaeIII GGCC 2 cut(s) 288, 1490
HapII CCGG 7 cut(s) 64, 961, 1070, 1244, 1491, 1820, 1877
HgaI GACGC 1 cut(s) 545
Hin1II CATG 7 cut(s) 98, 257, 931, 1129, 1660, 1814, 1901
HincII GTYRAC 1 cut(s) 336
HindII GTYRAC 1 cut(s) 336
HpaII CCGG 7 cut(s) 64, 961, 1070, 1244, 1491, 1820, 1877
HphI GGTGA 2 cut(s) 627, 1258
Hpy166II GTNNAC 6 cut(s) 336, 485, 916, 1189, 1249, 1729
Hpy188III TCNNGA 7 cut(s) 84, 254, 361, 788, 1070, 1449, 1509
Hpy8I GTNNAC 6 cut(s) 336, 485, 916, 1189, 1249, 1729
HpyAV CCTTC 3 cut(s) 115, 571, 1258
HpyCH4III ACNGT 6 cut(s) 269, 1007, 1204, 1672, 1861, 1915
HpyCH4IV ACGT 2 cut(s) 237, 939
HpyF3I CTNAG 8 cut(s) 142, 507, 593, 699, 1192, 1234, 1404, 1587
HpySE526I ACGT 2 cut(s) 237, 939
Hsp92II CATG 7 cut(s) 98, 257, 931, 1129, 1660, 1814, 1901
Kpn2I TCCGGA 1 cut(s) 1069
KpnI GGTACC 2 cut(s) 970, 1870
Ksp22I TGATCA 2 cut(s) 250, 682
Kzo9I GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
LguI GCTCTTC 1 cut(s) 225
LmnI GCTCC 5 cut(s) 27, 1072, 1347, 1726, 1822
Lsp1109I GCAGC 9 cut(s) 44, 62, 505, 1604, 1672, 1700, 1755, 1771, 1810
LweI GCATC 6 cut(s) 298, 520, 734, 934, 1367, 1454
MaeI CTAG 5 cut(s) 84, 498, 974, 1521, 1607
MaeII ACGT 2 cut(s) 237, 939
MaeIII GTNAC 5 cut(s) 122, 224, 543, 705, 1919
MalI GATC 9 cut(s) 252, 294, 315, 359, 415, 436, 684, 1500, 1525
MboI GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 3 cut(s) 237, 1723, 1819
MlyI GAGTC 7 cut(s) 119, 134, 547, 593, 671, 737, 1751
MmeI TCCRAC 5 cut(s) 729, 865, 1200, 1266, 1659
Mph1103I ATGCAT 2 cut(s) 535, 1447
MroI TCCGGA 1 cut(s) 1069
MseI TTAA 7 cut(s) 410, 860, 957, 1086, 1332, 1437, 1476
MslI CAYNNNNRTG 1 cut(s) 240
MspA1I CMGCKG 3 cut(s) 53, 518, 1571
MspI CCGG 7 cut(s) 64, 961, 1070, 1244, 1491, 1820, 1877
MspR9I CCNGG 5 cut(s) 626, 1346, 1363, 1373, 1877
Mva1269I GAATGC 2 cut(s) 700, 1447
MvaI CCWGG 4 cut(s) 626, 1346, 1363, 1373
NciI CCSGG 1 cut(s) 1877
NdeII GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
NlaIII CATG 7 cut(s) 98, 257, 931, 1129, 1660, 1814, 1901
NlaIV GGNNCC 6 cut(s) 68, 103, 843, 968, 1343, 1868
NmuCI GTSAC 3 cut(s) 122, 224, 1919
NsiI ATGCAT 2 cut(s) 535, 1447
NspI RCATGY 2 cut(s) 1129, 1901
PagI TCATGA 1 cut(s) 253
PaqCI CACCTGC 1 cut(s) 1682
PciSI GCTCTTC 1 cut(s) 225
PcsI WCGNNNNNNNCGW 2 cut(s) 234, 553
PctI GAATGC 2 cut(s) 700, 1447
PfeI GAWTC 4 cut(s) 245, 275, 1382, 1471
PflFI GACNNNGTC 1 cut(s) 1741
PfoI TCCNGGA 3 cut(s) 1344, 1371, 1875
PinAI ACCGGT 1 cut(s) 1243
PleI GAGTC 7 cut(s) 119, 134, 546, 593, 671, 737, 1750
PpsI GAGTC 7 cut(s) 119, 134, 546, 593, 671, 737, 1750
Psp6I CCWGG 4 cut(s) 624, 1344, 1361, 1371
PspFI CCCAGC 1 cut(s) 1481
PspGI CCWGG 4 cut(s) 624, 1344, 1361, 1371
PspN4I GGNNCC 6 cut(s) 68, 103, 843, 968, 1343, 1868
PspPI GGNCC 2 cut(s) 287, 908
PsrI GAACNNNNNNTAC 2 cut(s) 1594, 1626
PstI CTGCAG 1 cut(s) 1690
PsuI RGATCY 1 cut(s) 434
PsyI GACNNNGTC 1 cut(s) 1741
PvuII CAGCTG 2 cut(s) 53, 518
RsaI GTAC 5 cut(s) 186, 486, 968, 1612, 1868
RsaNI GTAC 5 cut(s) 185, 485, 967, 1611, 1867
RseI CAYNNNNRTG 1 cut(s) 240
SapI GCTCTTC 1 cut(s) 225
SaqAI TTAA 7 cut(s) 410, 860, 957, 1086, 1332, 1437, 1476
Sau3AI GATC 9 cut(s) 250, 292, 313, 357, 413, 434, 682, 1498, 1523
Sau96I GGNCC 2 cut(s) 287, 908
SchI GAGTC 7 cut(s) 119, 134, 547, 593, 671, 737, 1751
ScrFI CCNGG 5 cut(s) 626, 1346, 1363, 1373, 1877
SduI GDGCHC 3 cut(s) 237, 1723, 1819
SfaNI GCATC 6 cut(s) 298, 520, 734, 934, 1367, 1454
SfcI CTRYAG 4 cut(s) 916, 1166, 1686, 1860
SinI GGWCC 1 cut(s) 908
SmiMI CAYNNNNRTG 1 cut(s) 240
SmlI CTYRAG 3 cut(s) 26, 180, 1507
SmoI CTYRAG 3 cut(s) 26, 180, 1507
SsiI CCGC 3 cut(s) 776, 964, 1569
SspI AATATT 1 cut(s) 998
SspMI CTAG 5 cut(s) 84, 498, 974, 1521, 1607
StyD4I CCNGG 5 cut(s) 624, 1344, 1361, 1371, 1875
StyI CCWWGG 2 cut(s) 812, 1386
TaaI ACNGT 6 cut(s) 269, 1007, 1204, 1672, 1861, 1915
TaiI ACGT 2 cut(s) 240, 942
TaqI TCGA 3 cut(s) 818, 1526, 1764
TauI GCSGC 1 cut(s) 1571
TfiI GAWTC 4 cut(s) 245, 275, 1382, 1471
Tru1I TTAA 7 cut(s) 410, 860, 957, 1086, 1332, 1437, 1476
Tru9I TTAA 7 cut(s) 410, 860, 957, 1086, 1332, 1437, 1476
TscAI CASTG 6 cut(s) 52, 229, 274, 955, 1024, 1758
TseFI GTSAC 3 cut(s) 122, 224, 1919
TseI GCWGC 9 cut(s) 32, 50, 518, 1592, 1685, 1688, 1768, 1784, 1823
Tsp45I GTSAC 3 cut(s) 122, 224, 1919
TspDTI ATGAA 6 cut(s) 132, 150, 288, 1424, 1578, 1593
TspRI CASTG 6 cut(s) 52, 229, 274, 955, 1024, 1758
Tth111I GACNNNGTC 1 cut(s) 1741
VpaK11BI GGWCC 1 cut(s) 908
XapI RAATTY 5 cut(s) 16, 406, 1024, 1060, 1082
XbaI TCTAGA 1 cut(s) 83
XceI RCATGY 2 cut(s) 1129, 1901
XcmI CCANNNNNNNNNTGG 1 cut(s) 1042
XmiI GTMKAC 1 cut(s) 915
XspI CTAG 5 cut(s) 84, 498, 974, 1521, 1607
Zsp2I ATGCAT 2 cut(s) 535, 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.