Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0010407

Physical Location & Seq

Genomic Coordinates Forward (+)

25672798 .. 25678211

Gene Structure 5414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G270500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2613 bp

ATGAAATCCACCGCGGTTAGGGCTTTCCTGATCTGTCTAATTCTCTGCGCCGGCTCGGGCTTCGTTCATGGCGAGGAGCCGGCAGAAAATAAGTTCAGGGAACGTGAGGCCAGCGACGATTCCCTTGGCTATCCAAACATAGATGAGGATGCATTGTTGAATACGCAGTGCCCTGCGAAATTGGAGCTAAGATGGCAAACTGAAGTTAGTTCTAGCATATATGCCACGCCCTTGATCGCCGATATTAATAGTGATGGAAAGCTTGAGATTGTGGTTCCTTCTTTTGTTCACTATCTTGAAGTTCTAGAAGGTTCTGACGGAGACAAACATCCTGGTTGGCCTGCTTTTCATCAGTCAACCGTACACGCCAGTCCTCTCCTTTATGATATTGACAAGGATGGTGTGAGAGAAATAACTTTGGCAACCTACAATGGTGAAGTTCTATTTTTCAGGGTCTCAGGCTACATGATGGTAGATAAACTTGTAGTACCTCGTAGGAAAGTTAAAAAGAACTGGTATGGGGGTTTGCATCCAGATCCCGTGGATCGTACTCATCCAGATGTTCAGGATGATTCTCTTGTCATGGAGGCTATGAAATCAACTCTTCAAACAGATGGAGGTACACCCAAATCAAACAACTCTGCTACTCTTTCAACAGAAAGCCATCCTGATTTAAACAGTTCAAGTACTGTTTCAAAAGAAAGCCATCCTGATTTAAACACTTCAAGTACTATTTCAAAAGAAAGCAACCTTAGCATGGTGAATGCATCAAATCCAGAGAATAAAACGGAAACAAATTCAAGTCATGTAGAAACAGTTATCAAGTTGCCTACAAGCACAGACAATTATTCTGTGAAAAATGTGTCAGAGGAGACTGTTAATGCAGTGAATGCAACTAGTTCTGGGAGACGACTTTTGGAAGACAAAAACTTGAGCGAATCACTGGAGGTTGGTTCTGAATCCAAAAATAATAGTAAGGAGGATGTTCCTATTGCAACTGTAGAAAATGATGGACGTCTGGAAGGAGATGCCGATTCATCTTTTGATTTATTCCGTAACAGTGATGAACTGGCCGATGAGTATAGTTATGACTATGATGATTATGTTGATGAATCAATGTGGGGAGATGAAGAGTGGACTGAAGAGCAACATGAGAAGCTGGAGGATTATGTCAATGTTGATGCCCACATTCTCTGCACTCCTGTCATAGCGGACATTGATAATGATGGAGTATCAGAAATGGTTGTTGCTGTATCTTACTTCTTTGATCATGAGTATTATGACAACCCAGAGCGTATGAAGGAATTAGGTGACATTGATATTGGAAAGTATGTAGCTGGTTCCATTGTTGTATTCAATCTTGACACAAAGCAAGTAAAGTGGACTGCTGAACTAGATCTGAGTACAGAGACTGGGCAGTTCCGTGCTCATATATATTCTTCTCCAACTGTTGTGGATTTGGATGGTGATGGGAATCTGGACATTCTAGTCGGGACTTCCTTTGGCTTGTTTTATGCCTTGGATCATCATGGCAAGGTAAGGGAAAAATTTCCTCTTGAAATGGCTGAAATTCAAGGAGCTGTTGTTGCTGCTGATATCAATGATGATGGAAAAATTGAACTAGTGACTACTGATACTCATGGAAATGTTGCTGCATGGACTCCACAAGGAGTAGAGATTTGGGAAACGCATCTTAAGAGTCTAGTTCCCCAGGGTCCCACTATTGGTGATGTTGATGGGGATGGCCATACTGATGTTGTGGTTCCAACCCTGTCAGGGAACATATATGTTCTCAGTGGCAAAGATGGGTCAATTGTTCGTCCATATCCATATAGAACTCATGGGAGAGTTATGAATCAAGTTCTTCTAGTTGATTTAAGTAAAAAAGGAGAGAAGAAGAAGGGACTCACCCTTGTTACAACTTCATTTGATGGATACTTATACATAATTGATGGACCAACATCATGCACAGATGTTGTCGATATTGGTGAAACTTCATATAGCATGGTCTTGGCAGACAATGTTGATGGTGGAGACGATCTCGATCTTATTGTTTCAACCATGAATGGCAATGTCTTTTGCTTCTCGACTCCCGCTTCACATCATCCCCTCAAGGCATGGAGATTACCTAATCAAGGACGAAATCATGTTGCAAATAGGTACAACCGTGAAGGTGTCTTTGTTTCACATTCATCAAGAGCCTTCCGTGATGAAGAGGGCAAGAACTTCTGGGTGGAGATTGAGATTATAGATGGCTATAGATACCCATCTGGGTCGCAAGTACCATATAATGTCACGACAACCTTGTTAGTGCCCGGTAACTACCAAGGAGAGAGACGGATAGTGGTAAACCAGATCTTCAGTCGTCCTGGAAAATACCGTATAAAGCTTCCAACAGTTGGTGTAAGGACAACAGGGACTGTTATGGTGGAGATGGTTGACAAGAACGGACTCTACTTTTCTGATGATTTCTCCCTCACATTCCATATGTATTACTACAGACTGTTGAAGTGGCTGCTCGTCCTACCGATGATTGGAATGTTCGGCGTGCTTGTAATCCTTCGTCCTCAGGAAGCTGTGCCTTTGCCATCATTTTCGCGGAACACTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0012505 GO:0016020 GO:0016043 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046872 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0071840 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FG-GAP VCBS

Protein Analysis

871

Amino Acids

96.61

Weight (kDa)

4.69

Isoelectric Point (pI)

31.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010407)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09090 AT3G09090 AT3G09090
fragaria_vesca	FvH4_6g12060
malus_domestica	MD04G1146700.v1.1 MD12G1159900.v1.1
prunus_persica	Prupe.6G270500_v2.0.a1
pyrus_communis	pycom04g13250 pycom12g15180
rosa_chinensis	RchiOBHm_Chr3g0463901 RchiOBHm_Chr3g0463911
rosa_laevigata	RLG00000024737 RLG00000024746
rosa_multiflora	Rmu_sc0000517.1_g000002
rosa_roxburghii	Rroxscaffold_6G00416150
rosa_rugosa	Rorug03G0069100
rosa_samantha	Rh3AG126100 Rh3BG130100 Rh3CG132600 Rh3DG131300
rosa_wichuraiana	Rw3G010640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1487
AatII	GACGTC	1 cut(s)	1018
AccB7I	CCANNNNNTGG	1 cut(s)	2399
AccII	CGCG	2 cut(s)	14, 2599
AciI	CCGC	5 cut(s)	12, 14, 1211, 2094, 2599
AclWI	GGATC	3 cut(s)	530, 552, 1530
AcoI	YGGCCR	2 cut(s)	1071, 1744
AcsI	RAATTY	3 cut(s)	796, 1547, 1569
AcuI	CTGAAG	3 cut(s)	222, 1161, 2344
AcyI	GRCGYC	1 cut(s)	1015
AfaI	GTAC	9 cut(s)	363, 489, 550, 622, 688, 730, 1405, 2162, 2283
AfiI	CCNNNNNNNGG	7 cut(s)	18, 757, 1724, 1776, 2135, 2399, 2534
AflII	CTTAAG	1 cut(s)	1694
AhlI	ACTAGT	2 cut(s)	896, 1621
AjnI	CCWGG	3 cut(s)	331, 1710, 2368
AluBI	AGCT	7 cut(s)	187, 262, 1159, 1337, 1580, 2389, 2576
AluI	AGCT	7 cut(s)	187, 262, 1159, 1337, 1580, 2389, 2576
Alw21I	GWGCWC	1 cut(s)	1429
Alw26I	GTCTC	7 cut(s)	315, 460, 866, 901, 1403, 2028, 2329
AlwI	GGATC	3 cut(s)	530, 552, 1530
AlwNI	CAGNNNCTG	2 cut(s)	1412, 2420
Ama87I	CYCGRG	1 cut(s)	55
AoxI	GGCC	4 cut(s)	108, 338, 1071, 1744
ApeKI	GCWGC	3 cut(s)	1589, 1652, 2515
ApoI	RAATTY	3 cut(s)	796, 1547, 1569
AseI	ATTAAT	1 cut(s)	246
Asp700I	GAANNNNTTC	1 cut(s)	1548
AspLEI	GCGC	1 cut(s)	50
AspS9I	GGNCC	2 cut(s)	1715, 1955
AsuC2I	CCSGG	1 cut(s)	2316
AsuHPI	GGTGA	7 cut(s)	446, 772, 1322, 1478, 1739, 1900, 2000
AvaI	CYCGRG	1 cut(s)	55
AvaII	GGWCC	2 cut(s)	1715, 1955
AxyI	CCTNAGG	1 cut(s)	2568
BaeGI	GKGCMC	2 cut(s)	173, 2316
BaeI	ACNNNNGTAYC	2 cut(s)	2152, 2185
BalI	TGGCCA	1 cut(s)	1746
BbsI	GAAGAC	1 cut(s)	927
Bbv12I	GWGCWC	1 cut(s)	1429
BbvI	GCAGC	3 cut(s)	1576, 1639, 2502
BciT130I	CCWGG	3 cut(s)	333, 1712, 2370
BciVI	GTATCC	1 cut(s)	1928
BclI	TGATCA	1 cut(s)	1267
BcnI	CCSGG	1 cut(s)	2316
BcoDI	GTCTC	7 cut(s)	315, 460, 866, 901, 1403, 2028, 2329
BcuI	ACTAGT	2 cut(s)	896, 1621
BfaI	CTAG	8 cut(s)	213, 305, 897, 1394, 1487, 1622, 1703, 1868
BfmI	CTRYAG	3 cut(s)	999, 2257, 2497
BfrI	CTTAAG	1 cut(s)	1694
BfuI	GTATCC	1 cut(s)	1928
BglII	AGATCT	2 cut(s)	1396, 2355
BisI	GCNGC	3 cut(s)	1590, 1653, 2516
BlsI	GCNGC	3 cut(s)	1591, 1654, 2517
BmcAI	AGTACT	2 cut(s)	688, 730
Bme1390I	CCNGG	4 cut(s)	333, 1712, 2316, 2370
Bme18I	GGWCC	2 cut(s)	1715, 1955
BmeT110I	CYCGRG	1 cut(s)	55
BmgT120I	GGNCC	2 cut(s)	1715, 1955
BmiI	GGNNCC	6 cut(s)	78, 276, 1342, 1716, 1717, 1764
BmrFI	CCNGG	4 cut(s)	333, 1712, 2316, 2370
BmrI	ACTGGG	1 cut(s)	1422
BmsI	GCATC	6 cut(s)	139, 538, 776, 1018, 1171, 1699
BmuI	ACTGGG	1 cut(s)	1422
BpiI	GAAGAC	1 cut(s)	927
BplI	GAGNNNNNCTC	2 cut(s)	2025, 2057
BpmI	CTGGAG	2 cut(s)	965, 1181
Bpu10I	CCTNAGC	1 cut(s)	752
BpuEI	CTTGAG	3 cut(s)	284, 952, 2096
BpuMI	CCSGG	1 cut(s)	2316
BsaBI	GATNNNNATC	3 cut(s)	1473, 2043, 2266
BsaHI	GRCGYC	1 cut(s)	1015
BsaI	GGTCTC	1 cut(s)	460
BsaJI	CCNNGG	7 cut(s)	12, 124, 540, 1518, 1710, 1711, 2326
BsaXI	ACNNNNNCTCC	2 cut(s)	1569, 1599
Bsc4I	CCNNNNNNNGG	7 cut(s)	18, 757, 1724, 1776, 2135, 2399, 2534
Bse118I	RCCGGY	2 cut(s)	50, 79
Bse1I	ACTGG	5 cut(s)	369, 518, 948, 1074, 1417
Bse21I	CCTNAGG	1 cut(s)	2568
Bse3DI	GCAATG	1 cut(s)	2077
Bse8I	GATNNNNATC	3 cut(s)	1473, 2043, 2266
BseBI	CCWGG	3 cut(s)	333, 1712, 2370
BseDI	CCNNGG	7 cut(s)	12, 124, 540, 1518, 1710, 1711, 2326
BseJI	GATNNNNATC	3 cut(s)	1473, 2043, 2266
BseLI	CCNNNNNNNGG	7 cut(s)	18, 757, 1724, 1776, 2135, 2399, 2534
BseMI	GCAATG	1 cut(s)	2077
BseMII	CTCAG	4 cut(s)	471, 1391, 1807, 2582
BseNI	ACTGG	5 cut(s)	369, 518, 948, 1074, 1417
BseRI	GAGGAG	2 cut(s)	89, 884
BseSI	GKGCMC	2 cut(s)	173, 2316
BseXI	GCAGC	3 cut(s)	1576, 1639, 2502
BsgI	GTGCAG	1 cut(s)	1180
Bsh1236I	CGCG	2 cut(s)	14, 2599
BshFI	GGCC	4 cut(s)	110, 340, 1073, 1746
BsiHKAI	GWGCWC	1 cut(s)	1429
BsiHKCI	CYCGRG	1 cut(s)	55
BsiSI	CCGG	3 cut(s)	51, 80, 2316
BslFI	GGGAC	4 cut(s)	1507, 1701, 1917, 2431
BslI	CCNNNNNNNGG	7 cut(s)	18, 757, 1724, 1776, 2135, 2399, 2534
BsmAI	GTCTC	7 cut(s)	315, 460, 866, 901, 1403, 2028, 2329
BsmBI	CGTCTC	3 cut(s)	901, 2028, 2329
BsmFI	GGGAC	4 cut(s)	1507, 1701, 1917, 2431
BsmI	GAATGC	2 cut(s)	769, 895
BsnI	GGCC	4 cut(s)	110, 340, 1073, 1746
Bso31I	GGTCTC	1 cut(s)	460
BsoBI	CYCGRG	1 cut(s)	55
Bsp1286I	GDGCHC	3 cut(s)	173, 1429, 2316
BspACI	CCGC	5 cut(s)	12, 14, 1211, 2094, 2599
BspANI	GGCC	4 cut(s)	110, 340, 1073, 1746
BspCNI	CTCAG	4 cut(s)	470, 1392, 1806, 2581
BspFNI	CGCG	2 cut(s)	14, 2599
BspHI	TCATGA	1 cut(s)	1270
BspLI	GGNNCC	6 cut(s)	78, 276, 1342, 1716, 1717, 1764
BspPI	GGATC	3 cut(s)	530, 552, 1530
BspQI	GCTCTTC	1 cut(s)	1137
BspTI	CTTAAG	1 cut(s)	1694
BspTNI	GGTCTC	1 cut(s)	460
BsrDI	GCAATG	1 cut(s)	2077
BsrFI	RCCGGY	2 cut(s)	50, 79
BsrI	ACTGG	5 cut(s)	369, 518, 948, 1074, 1417
BssAI	RCCGGY	2 cut(s)	50, 79
BssECI	CCNNGG	7 cut(s)	12, 124, 540, 1518, 1710, 1711, 2326
BssNI	GRCGYC	1 cut(s)	1015
BssT1I	CCWWGG	3 cut(s)	124, 1518, 2326
Bst2UI	CCWGG	3 cut(s)	333, 1712, 2370
Bst6I	CTCTTC	4 cut(s)	609, 1125, 1137, 2208
BstACI	GRCGYC	1 cut(s)	1015
BstAFI	CTTAAG	1 cut(s)	1694
BstAPI	GCANNNNNTGC	1 cut(s)	890
BstC8I	GCNNGC	5 cut(s)	52, 81, 112, 342, 2549
BstDEI	CTNAG	6 cut(s)	188, 457, 752, 1400, 1793, 2568
BstDSI	CCRYGG	2 cut(s)	12, 540
BstENI	CCTNNNNNAGG	1 cut(s)	2133
BstFNI	CGCG	2 cut(s)	14, 2599
BstHHI	GCGC	1 cut(s)	50
BstMAI	GTCTC	7 cut(s)	315, 460, 866, 901, 1403, 2028, 2329
BstMWI	GCNNNNNNNGC	5 cut(s)	20, 193, 753, 890, 1586
BstNI	CCWGG	3 cut(s)	333, 1712, 2370
BstSCI	CCNGG	4 cut(s)	331, 1710, 2314, 2368
BstSFI	CTRYAG	3 cut(s)	999, 2257, 2497
BstSLI	GKGCMC	2 cut(s)	173, 2316
BstUI	CGCG	2 cut(s)	14, 2599
BstV1I	GCAGC	3 cut(s)	1576, 1639, 2502
BstV2I	GAAGAC	1 cut(s)	927
BstX2I	RGATCY	3 cut(s)	535, 1396, 2355
BstYI	RGATCY	3 cut(s)	535, 1396, 2355
Bsu36I	CCTNAGG	1 cut(s)	2568
BsuI	GTATCC	1 cut(s)	1928
BsuRI	GGCC	4 cut(s)	110, 340, 1073, 1746
BtgI	CCRYGG	2 cut(s)	12, 540
BtsI	GCAGTG	2 cut(s)	173, 891
BtsIMutI	CAGTG	6 cut(s)	173, 891, 941, 1066, 1801, 2604
Cac8I	GCNNGC	5 cut(s)	52, 81, 112, 342, 2549
CaiI	CAGNNNCTG	2 cut(s)	1412, 2420
CciI	TCATGA	1 cut(s)	1270
CfoI	GCGC	1 cut(s)	50
Cfr10I	RCCGGY	2 cut(s)	50, 79
Cfr13I	GGNCC	2 cut(s)	1715, 1955
Cfr42I	CCGCGG	1 cut(s)	15
Csp6I	GTAC	9 cut(s)	362, 488, 549, 621, 687, 729, 1404, 2161, 2282
CspCI	CAANNNNNGTGG	4 cut(s)	1361, 1396, 1434, 1469
CviQI	GTAC	9 cut(s)	362, 488, 549, 621, 687, 729, 1404, 2161, 2282
DdeI	CTNAG	6 cut(s)	188, 457, 752, 1400, 1793, 2568
DraI	TTTAAA	2 cut(s)	675, 717
DrdI	GACNNNNNNGTC	1 cut(s)	1487
DseDI	GACNNNNNNGTC	1 cut(s)	1487
EaeI	YGGCCR	2 cut(s)	1071, 1744
Eam1104I	CTCTTC	4 cut(s)	609, 1125, 1137, 2208
EarI	CTCTTC	4 cut(s)	609, 1125, 1137, 2208
Eco130I	CCWWGG	3 cut(s)	124, 1518, 2326
Eco31I	GGTCTC	1 cut(s)	460
Eco32I	GATATC	1 cut(s)	1597
Eco47I	GGWCC	2 cut(s)	1715, 1955
Eco57I	CTGAAG	3 cut(s)	222, 1161, 2344
Eco81I	CCTNAGG	1 cut(s)	2568
Eco88I	CYCGRG	1 cut(s)	55
EcoNI	CCTNNNNNAGG	1 cut(s)	2133
EcoO109I	RGGNCCY	1 cut(s)	1715
EcoRII	CCWGG	3 cut(s)	331, 1710, 2368
EcoRV	GATATC	1 cut(s)	1597
EcoT14I	CCWWGG	3 cut(s)	124, 1518, 2326
EcoT22I	ATGCAT	2 cut(s)	154, 769
ErhI	CCWWGG	3 cut(s)	124, 1518, 2326
Esp3I	CGTCTC	3 cut(s)	901, 2028, 2329
FaqI	GGGAC	4 cut(s)	1507, 1701, 1917, 2431
FauI	CCCGC	1 cut(s)	2101
FauNDI	CATATG	1 cut(s)	2487
FbaI	TGATCA	1 cut(s)	1267
Fnu4HI	GCNGC	3 cut(s)	1590, 1653, 2516
Fsp4HI	GCNGC	3 cut(s)	1590, 1653, 2516
FspBI	CTAG	8 cut(s)	213, 305, 897, 1394, 1487, 1622, 1703, 1868
GlaI	GCGC	1 cut(s)	49
GluI	GCNGC	3 cut(s)	1590, 1653, 2516
GsuI	CTGGAG	2 cut(s)	965, 1181
HaeIII	GGCC	4 cut(s)	110, 340, 1073, 1746
HapII	CCGG	3 cut(s)	51, 80, 2316
HhaI	GCGC	1 cut(s)	50
Hin1I	GRCGYC	1 cut(s)	1015
Hin6I	GCGC	1 cut(s)	48
HinP1I	GCGC	1 cut(s)	48
HincII	GTYRAC	2 cut(s)	357, 2440
HindII	GTYRAC	2 cut(s)	357, 2440
HindIII	AAGCTT	2 cut(s)	260, 2387
HpaII	CCGG	3 cut(s)	51, 80, 2316
HphI	GGTGA	7 cut(s)	446, 772, 1322, 1478, 1739, 1900, 2000
Hpy166II	GTNNAC	8 cut(s)	289, 357, 364, 623, 1137, 1383, 2350, 2440
Hpy188I	TCNGA	6 cut(s)	316, 868, 958, 1237, 1401, 2464
Hpy8I	GTNNAC	8 cut(s)	289, 357, 364, 623, 1137, 1383, 2350, 2440
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	8 cut(s)	288, 302, 1016, 1294, 1894, 2165, 2212, 2570
HpyCH4IV	ACGT	2 cut(s)	103, 1015
HpyF10VI	GCNNNNNNNGC	5 cut(s)	20, 193, 753, 890, 1586
HpyF3I	CTNAG	6 cut(s)	188, 457, 752, 1400, 1793, 2568
HpySE526I	ACGT	2 cut(s)	103, 1015
Hsp92I	GRCGYC	1 cut(s)	1015
HspAI	GCGC	1 cut(s)	48
KflI	GGGWCCC	1 cut(s)	1715
KroI	GCCGGC	2 cut(s)	50, 79
KroNI	GCCGGC	2 cut(s)	52, 81
Ksp22I	TGATCA	1 cut(s)	1267
KspI	CCGCGG	1 cut(s)	15
LguI	GCTCTTC	1 cut(s)	1137
LmnI	GCTCC	3 cut(s)	76, 184, 1577
Lsp1109I	GCAGC	3 cut(s)	1576, 1639, 2502
LweI	GCATC	6 cut(s)	139, 538, 776, 1018, 1171, 1699
MaeI	CTAG	8 cut(s)	213, 305, 897, 1394, 1487, 1622, 1703, 1868
MaeII	ACGT	2 cut(s)	103, 1015
MaeIII	GTNAC	6 cut(s)	1055, 1310, 1624, 1915, 2293, 2318
MfeI	CAATTG	1 cut(s)	1812
MflI	RGATCY	3 cut(s)	535, 1396, 2355
MhlI	GDGCHC	3 cut(s)	173, 1429, 2316
MlsI	TGGCCA	1 cut(s)	1746
MluNI	TGGCCA	1 cut(s)	1746
MlyI	GAGTC	5 cut(s)	1654, 1708, 1899, 2083, 2445
MmeI	TCCRAC	3 cut(s)	1469, 1790, 2417
Mox20I	TGGCCA	1 cut(s)	1746
Mph1103I	ATGCAT	2 cut(s)	154, 769
MroNI	GCCGGC	2 cut(s)	50, 79
MroXI	GAANNNNTTC	1 cut(s)	1548
MscI	TGGCCA	1 cut(s)	1746
MseI	TTAA	7 cut(s)	246, 504, 674, 716, 879, 1695, 1877
MslI	CAYNNNNRTG	3 cut(s)	558, 1644, 1752
Msp20I	TGGCCA	1 cut(s)	1746
MspA1I	CMGCKG	1 cut(s)	14
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	3 cut(s)	51, 80, 2316
MspR9I	CCNGG	4 cut(s)	333, 1712, 2316, 2370
MunI	CAATTG	1 cut(s)	1812
Mva1269I	GAATGC	2 cut(s)	769, 895
MvaI	CCWGG	3 cut(s)	333, 1712, 2370
MvnI	CGCG	2 cut(s)	14, 2599
MwoI	GCNNNNNNNGC	5 cut(s)	20, 193, 753, 890, 1586
NaeI	GCCGGC	2 cut(s)	52, 81
NciI	CCSGG	1 cut(s)	2316
NdeI	CATATG	1 cut(s)	2487
NgoMIV	GCCGGC	2 cut(s)	50, 79
NlaIV	GGNNCC	6 cut(s)	78, 276, 1342, 1716, 1717, 1764
NmuCI	GTSAC	3 cut(s)	1310, 1624, 2293
NsiI	ATGCAT	2 cut(s)	154, 769
PagI	TCATGA	1 cut(s)	1270
PasI	CCCWGGG	1 cut(s)	1711
PciSI	GCTCTTC	1 cut(s)	1137
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PctI	GAATGC	2 cut(s)	769, 895
PdiI	GCCGGC	2 cut(s)	52, 81
PdmI	GAANNNNTTC	1 cut(s)	1548
PfeI	GAWTC	8 cut(s)	119, 572, 938, 959, 1034, 1112, 1474, 1855
PflMI	CCANNNNNTGG	1 cut(s)	2399
PfoI	TCCNGGA	1 cut(s)	2368
PkrI	GCNGC	3 cut(s)	1591, 1654, 2517
PleI	GAGTC	5 cut(s)	1654, 1707, 1899, 2083, 2445
PpsI	GAGTC	5 cut(s)	1654, 1707, 1899, 2083, 2445
PpuMI	RGGWCCY	1 cut(s)	1715
PshBI	ATTAAT	1 cut(s)	246
Psp5II	RGGWCCY	1 cut(s)	1715
Psp6I	CCWGG	3 cut(s)	331, 1710, 2368
PspGI	CCWGG	3 cut(s)	331, 1710, 2368
PspN4I	GGNNCC	6 cut(s)	78, 276, 1342, 1716, 1717, 1764
PspPI	GGNCC	2 cut(s)	1715, 1955
PspPPI	RGGWCCY	1 cut(s)	1715
PsrI	GAACNNNNNNTAC	2 cut(s)	2438, 2470
PstNI	CAGNNNCTG	2 cut(s)	1412, 2420
PsuI	RGATCY	3 cut(s)	535, 1396, 2355
RsaI	GTAC	9 cut(s)	363, 489, 550, 622, 688, 730, 1405, 2162, 2283
RsaNI	GTAC	9 cut(s)	362, 488, 549, 621, 687, 729, 1404, 2161, 2282
RseI	CAYNNNNRTG	3 cut(s)	558, 1644, 1752
SacII	CCGCGG	1 cut(s)	15
SapI	GCTCTTC	1 cut(s)	1137
SaqAI	TTAA	7 cut(s)	246, 504, 674, 716, 879, 1695, 1877
SatI	GCNGC	3 cut(s)	1590, 1653, 2516
Sau96I	GGNCC	2 cut(s)	1715, 1955
ScaI	AGTACT	2 cut(s)	688, 730
SchI	GAGTC	5 cut(s)	1654, 1708, 1899, 2083, 2445
ScrFI	CCNGG	4 cut(s)	333, 1712, 2316, 2370
SduI	GDGCHC	3 cut(s)	173, 1429, 2316
SfaNI	GCATC	6 cut(s)	139, 538, 776, 1018, 1171, 1699
SfcI	CTRYAG	3 cut(s)	999, 2257, 2497
Sfr303I	CCGCGG	1 cut(s)	15
SgrBI	CCGCGG	1 cut(s)	15
SinI	GGWCC	2 cut(s)	1715, 1955
SmiMI	CAYNNNNRTG	3 cut(s)	558, 1644, 1752
SmlI	CTYRAG	4 cut(s)	263, 931, 1694, 2111
SmoI	CTYRAG	4 cut(s)	263, 931, 1694, 2111
SpeI	ACTAGT	2 cut(s)	896, 1621
SsiI	CCGC	5 cut(s)	12, 14, 1211, 2094, 2599
SspMI	CTAG	8 cut(s)	213, 305, 897, 1394, 1487, 1622, 1703, 1868
StyD4I	CCNGG	4 cut(s)	331, 1710, 2314, 2368
StyI	CCWWGG	3 cut(s)	124, 1518, 2326
TaiI	ACGT	2 cut(s)	106, 1018
TaqI	TCGA	3 cut(s)	1980, 2043, 2087
TatI	WGTACW	3 cut(s)	686, 728, 1403
TfiI	GAWTC	8 cut(s)	119, 572, 938, 959, 1034, 1112, 1474, 1855
Tru1I	TTAA	7 cut(s)	246, 504, 674, 716, 879, 1695, 1877
Tru9I	TTAA	7 cut(s)	246, 504, 674, 716, 879, 1695, 1877
TscAI	CASTG	6 cut(s)	173, 891, 948, 1066, 1801, 2611
TseFI	GTSAC	3 cut(s)	1310, 1624, 2293
TseI	GCWGC	3 cut(s)	1589, 1652, 2515
Tsp45I	GTSAC	3 cut(s)	1310, 1624, 2293
TspGWI	ACGGA	7 cut(s)	333, 803, 1043, 1412, 2195, 2353, 2463
TspRI	CASTG	6 cut(s)	173, 891, 948, 1066, 1801, 2611
Van91I	CCANNNNNTGG	1 cut(s)	2399
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	2 cut(s)	1715, 1955
VspI	ATTAAT	1 cut(s)	246
XagI	CCTNNNNNAGG	1 cut(s)	2133
XapI	RAATTY	3 cut(s)	796, 1547, 1569
XbaI	TCTAGA	1 cut(s)	304
XmnI	GAANNNNTTC	1 cut(s)	1548
XspI	CTAG	8 cut(s)	213, 305, 897, 1394, 1487, 1622, 1703, 1868
ZraI	GACGTC	1 cut(s)	1016
ZrmI	AGTACT	2 cut(s)	688, 730
Zsp2I	ATGCAT	2 cut(s)	154, 769

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.