Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0010407

Physical Location & Seq

Genomic Coordinates Forward (+)

38638392 .. 38643305

Gene Structure 4914 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024737

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2661 bp

ATGAAATCCGACGGGATTCGGGTGCTTTTCCTGATCTGTCTAATTCTTTGCGACGGCTCGAAATTCGTGCGCGGCGGCGATGAGCCGGCCAAGAATAAATTCCGGGAACGCGAGGCCAGCGACGACTCCCTTGGCTATCCAAACATAGATGAGGATGCGTTGTTGAATACACAGTGCCCCGCGAAATTAGAGCTCAGATGGCAAACGGAAGTTAGTTCTAGTATTTATGCTACGCCATTGATCTCCGATATTAATAGTGATGGAAAGCTTGAGATTGTGGTGCCATCTTTTGTTCACTATCTTGAAGTTTTGGAAGGTTCCGACGGAGACAAACTCCCCGGTTGGCCTGCCTTTCATCAGTCAACTGTACATGCAAGTCCTCTCCTGTATGATATCGATAAGGATGGTGTGAGAGAGATAGCTTTAGCAACCTACAATGGTGAAGTTCTCTTTTTCAGGGCCTCAGGCTACATGATGGTAGATAAACTAGTAGTACCTCGTAGAAAAGTTAAAAAGAATTGGTTTGGGGGTTTGCATCCAGATCCTGTTGATCGTACCCATCCAGATGTTCATGATGACCTTCTTGTCATGCAGGCCACTAATATGAATTCAAATCCTCAAACAGATGAAAATACAACTAAAATAAACAATTCTGCTACTGTTGCAACAGAAAGCCATCCTGGTGTTAATACTTCAACTTCTGTTTCCAATGATGGCCATCCTGAGTTGGATACTAATCCTACTGTTTCAAAAGAAAGTGATCCCGGCTTAAGTACTTCAGCTACAAACGAAAGCCACCTTAGCATGGTCAATGCATCGAATCCAGCGGTTGAGAAGAAAGCAAATTTAAGTCTGTTAGAAACAGACATCAAGCAATCTACAAGCACAGAGAAGTCTTCTGTCAACAATGTACCAGTGGAAACTCTGAATGCCGAGAAGGGGACTAGTTCAGTTAGACGGCTTTTGGAAGACAACAATTCAAGCAAATCACAGGATGGTGGTTCTGAATCCAAAGATAATAATAAGGAGGACATTCGTGTTGCAACTGTAGAAAATGATGGTGTTCTCGAAGAGGATGCTGATTCATCTTTTGAGTTACTCCGTGACAATGATGAACTGGCCGACGAGTATAACTATGACTATGATGACTATGTTGATGAAGAAATGTGGGGAGATGAGGAGTGGACTGAAGTGCAACACGAGAAAATAGAAGATTATGTCAATGTTGACGCACACATCTTGTGCACTCCTGTCATAGCGGACATTGATAATGATGGAGTATCAGAAATGGTTGTTGCCGTTTCTTACTTTTTTGATCATGAGTACTATGACAACCCAGAGCATATGAAGGAATTGGGTGGCATTGATATAGGAAAATATGTAGCTGGTTCCATTGTTGTGTTCAACCTTGACACTAAGCAAGTAAAGTGGACTGCTGATCTAGATTTGAGTACAGATACGGGAACATTCCGTGCTTACATATATTCCTCTCCGACTATTGTTGATTTGGATGGTGATGGGAACCTGGACATTCTTGTCGGAACTTCATTTGGCTTGTTCTATGTGTTGGATCATCATGGCAAGGTGAGGGAAAAGTTCCCTCTTGAAATGGCTGAAATTCAAGGAGCTGTTGTTGCAGCTGATATTAATGATGATGGAAAAATTGAACTAGTGACTACTGATGGTCATGGAAATGTTGCTGCATGGACTGCTCAAGGAGCAGAAATTTGGGAAACGCATCTTAAGAGTCTAGTTCCCCAGGGTCCCACTATTGGTGATGTTGATGGGGATGGCCGTACTGATGTTGTGGTTCCAACACTATCAGGGAACATATACGTTCTTAGTGGCAAAGATGGGTCGATTGTTCGTCCTTATCCATATAGAACTCATGGGAGGGTTATGAGTCAAGTTCTTCTAGTGGATTTAAGTAAAAAAGGAGAGAAAAAGAAAGGACTCACTCTTGCTACAACATCATTTGATGGATATTTGTACCTTATTGATGGACCAACAGCATGTGCAGATGTTGTTGATATTGGTGAAACTTCATATAGCATGGTCTTAGCAGATAATGTTGACGGTGGAGACGATCTTGATCTTATTGTTACAACCATGAATGGCAATGTCTATTGCTTCTCGACTCCAGCTTCACATCATCCCCTTAAGGCATGGAGAGTACCTAATCAGGGGAGAAATCATCTTGCAAATAGGTACAACCGTCAAGGTATCTTTGTTAAACATTCATCAAGAGCTTTTCGTGACGAAGAGGGCAAGAACTTCTTTGTGGAGATTGAGATCATAGATGACTATAGATACCCATCTGGGTTGCAAGCCCCATACAATGTCACAACAACCTTGTTGGTGCCTGGTAATTACCAAGGAGAGAGAAGGATAAAGATAAACCAGACCTTCAATCGTCCTGGAAAGTATCGTATAAAGCTTCCAACAGTTGGTGTAAGGACTACTGGGACTGTTGTGGTCGAGATGGTTGACAAGAATGGACTCTATTTTTCAGATGATTTCTCCCTCACATTCCATATGTATTACTACAGACTGTTAAAGTGGCTGCTTGTCCTGCCAATGTTGGGGATGTTTGGCGTGCTTGTAATCCTTCGTCCTCAGGAAGCTGTCCCTTTGCCATCATTTTCACGAAACACTGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0012505 GO:0016020 GO:0016043 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046872 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0071840 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FG-GAP VCBS

Protein Analysis

887

Amino Acids

98.24

Weight (kDa)

4.68

Isoelectric Point (pI)

30.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FG-GAP_3	PF13517	548 - 604	9.3e-07	FG-GAP-like repeat
Beta-sand_DEX1	PF23722	741 - 845	1.4e-34	DEX1 beta-sandwich

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010407)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09090 AT3G09090 AT3G09090
fragaria_vesca	FvH4_6g12060
malus_domestica	MD04G1146700.v1.1 MD12G1159900.v1.1
prunus_persica	Prupe.6G270500_v2.0.a1
pyrus_communis	pycom04g13250 pycom12g15180
rosa_chinensis	RchiOBHm_Chr3g0463901 RchiOBHm_Chr3g0463911
rosa_laevigata	RLG00000024737 RLG00000024746
rosa_multiflora	Rmu_sc0000517.1_g000002
rosa_roxburghii	Rroxscaffold_6G00416150
rosa_rugosa	Rorug03G0069100
rosa_samantha	Rh3AG126100 Rh3BG130100 Rh3CG132600 Rh3DG131300
rosa_wichuraiana	Rw3G010640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	584, 1535
AccB1I	GGYRCC	2 cut(s)	280, 2359
AccB7I	CCANNNNNTGG	1 cut(s)	2447
AccII	CGCG	3 cut(s)	72, 111, 182
AciI	CCGC	5 cut(s)	72, 75, 180, 827, 1259
AclWI	GGATC	3 cut(s)	536, 755, 1578
AcoI	YGGCCR	4 cut(s)	87, 715, 1119, 1792
AcsI	RAATTY	6 cut(s)	62, 98, 607, 844, 1617, 1725
AcuI	CTGAAG	2 cut(s)	762, 1209
AfiI	CCNNNNNNNGG	6 cut(s)	805, 939, 1772, 2183, 2447, 2582
AflII	CTTAAG	3 cut(s)	769, 1742, 2159
AhlI	ACTAGT	3 cut(s)	487, 944, 1669
AjnI	CCWGG	5 cut(s)	679, 1524, 1758, 2362, 2416
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
Alw21I	GWGCWC	2 cut(s)	195, 1247
Alw26I	GTCTC	2 cut(s)	321, 2076
Alw44I	GTGCAC	1 cut(s)	1243
AlwI	GGATC	3 cut(s)	536, 755, 1578
AlwNI	CAGNNNCTG	1 cut(s)	545
AoxI	GGCC	8 cut(s)	87, 114, 344, 459, 594, 715, 1119, 1792
ApaLI	GTGCAC	1 cut(s)	1243
ApeKI	GCWGC	3 cut(s)	1637, 1700, 2563
ApoI	RAATTY	6 cut(s)	62, 98, 607, 844, 1617, 1725
AseI	ATTAAT	2 cut(s)	252, 1647
Asp700I	GAANNNNTTC	1 cut(s)	98
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	3 cut(s)	459, 1763, 2003
AsuC2I	CCSGG	3 cut(s)	104, 339, 765
AsuHPI	GGTGA	5 cut(s)	452, 1526, 1597, 1787, 2048
AvaII	GGWCC	2 cut(s)	1763, 2003
AxyI	CCTNAGG	2 cut(s)	463, 2616
BaeGI	GKGCMC	2 cut(s)	179, 1247
BaeI	ACNNNNGTAYC	2 cut(s)	2200, 2233
BalI	TGGCCA	1 cut(s)	717
BanI	GGYRCC	2 cut(s)	280, 2359
BanII	GRGCYC	1 cut(s)	195
BauI	CACGAG	1 cut(s)	1199
BbsI	GAAGAC	2 cut(s)	888, 975
Bbv12I	GWGCWC	2 cut(s)	195, 1247
BbvI	GCAGC	3 cut(s)	1649, 1687, 2550
BceAI	ACGGC	4 cut(s)	70, 974, 1283, 1779
BcgI	CGANNNNNNTGC	4 cut(s)	49, 83, 1058, 1092
BciT130I	CCWGG	5 cut(s)	681, 1526, 1760, 2364, 2418
BciVI	GTATCC	1 cut(s)	724
BclI	TGATCA	1 cut(s)	1315
BcnI	CCSGG	3 cut(s)	104, 339, 765
BcoDI	GTCTC	2 cut(s)	321, 2076
BcuI	ACTAGT	3 cut(s)	487, 944, 1669
BfaI	CTAG	7 cut(s)	219, 488, 945, 1442, 1670, 1751, 1916
BfmI	CTRYAG	3 cut(s)	1047, 2305, 2545
BfrI	CTTAAG	3 cut(s)	769, 1742, 2159
BfuI	GTATCC	1 cut(s)	724
BisI	GCNGC	5 cut(s)	73, 76, 1638, 1701, 2564
BlsI	GCNGC	5 cut(s)	74, 77, 1639, 1702, 2565
BmcAI	AGTACT	2 cut(s)	775, 1325
Bme1390I	CCNGG	8 cut(s)	104, 339, 681, 765, 1526, 1760, 2364, 2418
Bme18I	GGWCC	2 cut(s)	1763, 2003
BmgT120I	GGNCC	3 cut(s)	459, 1763, 2003
BmiI	GGNNCC	8 cut(s)	282, 319, 1390, 1523, 1764, 1765, 1812, 2361
BmrFI	CCNGG	8 cut(s)	104, 339, 681, 765, 1526, 1760, 2364, 2418
BmrI	ACTGGG	1 cut(s)	2472
BmsI	GCATC	5 cut(s)	145, 544, 824, 1066, 1747
BmuI	ACTGGG	1 cut(s)	2472
BpiI	GAAGAC	2 cut(s)	888, 975
BplI	GAGNNNNNCTC	2 cut(s)	318, 350
BpmI	CTGGAG	1 cut(s)	2124
Bpu10I	CCTNAGC	1 cut(s)	800
BpuEI	CTTGAG	2 cut(s)	290, 1698
BpuMI	CCSGG	3 cut(s)	104, 339, 765
Bsa29I	ATCGAT	1 cut(s)	396
BsaBI	GATNNNNATC	5 cut(s)	717, 735, 2091, 2291, 2314
BsaJI	CCNNGG	5 cut(s)	130, 337, 1758, 1759, 2374
BsaXI	ACNNNNNCTCC	2 cut(s)	1617, 1647
Bsc4I	CCNNNNNNNGG	6 cut(s)	805, 939, 1772, 2183, 2447, 2582
Bse118I	RCCGGY	1 cut(s)	85
Bse1I	ACTGG	3 cut(s)	914, 1122, 2467
Bse21I	CCTNAGG	2 cut(s)	463, 2616
Bse3DI	GCAATG	1 cut(s)	2125
Bse8I	GATNNNNATC	5 cut(s)	717, 735, 2091, 2291, 2314
BseBI	CCWGG	5 cut(s)	681, 1526, 1760, 2364, 2418
BseCI	ATCGAT	1 cut(s)	396
BseDI	CCNNGG	5 cut(s)	130, 337, 1758, 1759, 2374
BseJI	GATNNNNATC	5 cut(s)	717, 735, 2091, 2291, 2314
BseLI	CCNNNNNNNGG	6 cut(s)	805, 939, 1772, 2183, 2447, 2582
BseMI	GCAATG	1 cut(s)	2125
BseMII	CTCAG	4 cut(s)	208, 477, 714, 2630
BseNI	ACTGG	3 cut(s)	914, 1122, 2467
BseRI	GAGGAG	1 cut(s)	1193
BseSI	GKGCMC	2 cut(s)	179, 1247
BseXI	GCAGC	3 cut(s)	1649, 1687, 2550
BsgI	GTGCAG	1 cut(s)	2037
Bsh1236I	CGCG	3 cut(s)	72, 111, 182
BshFI	GGCC	8 cut(s)	89, 116, 346, 461, 596, 717, 1121, 1794
BshNI	GGYRCC	2 cut(s)	280, 2359
BshVI	ATCGAT	1 cut(s)	396
BsiHKAI	GWGCWC	2 cut(s)	195, 1247
BsiSI	CCGG	4 cut(s)	86, 103, 339, 765
BslFI	GGGAC	4 cut(s)	955, 1749, 2479, 2612
BslI	CCNNNNNNNGG	6 cut(s)	805, 939, 1772, 2183, 2447, 2582
BsmAI	GTCTC	2 cut(s)	321, 2076
BsmBI	CGTCTC	1 cut(s)	2076
BsmFI	GGGAC	4 cut(s)	955, 1749, 2479, 2612
BsmI	GAATGC	1 cut(s)	934
BsnI	GGCC	8 cut(s)	89, 116, 346, 461, 596, 717, 1121, 1794
Bsp1286I	GDGCHC	3 cut(s)	179, 195, 1247
Bsp1407I	TGTACA	1 cut(s)	367
BspACI	CCGC	5 cut(s)	72, 75, 180, 827, 1259
BspANI	GGCC	8 cut(s)	89, 116, 346, 461, 596, 717, 1121, 1794
BspCNI	CTCAG	4 cut(s)	207, 476, 715, 2629
BspDI	ATCGAT	1 cut(s)	396
BspFNI	CGCG	3 cut(s)	72, 111, 182
BspHI	TCATGA	2 cut(s)	571, 1318
BspLI	GGNNCC	8 cut(s)	282, 319, 1390, 1523, 1764, 1765, 1812, 2361
BspPI	GGATC	3 cut(s)	536, 755, 1578
BspT107I	GGYRCC	2 cut(s)	280, 2359
BspTI	CTTAAG	3 cut(s)	769, 1742, 2159
BsrDI	GCAATG	1 cut(s)	2125
BsrFI	RCCGGY	1 cut(s)	85
BsrGI	TGTACA	1 cut(s)	367
BsrI	ACTGG	3 cut(s)	914, 1122, 2467
BssAI	RCCGGY	1 cut(s)	85
BssECI	CCNNGG	5 cut(s)	130, 337, 1758, 1759, 2374
BssSI	CACGAG	1 cut(s)	1199
BssT1I	CCWWGG	2 cut(s)	130, 2374
Bst2BI	CACGAG	1 cut(s)	1199
Bst2UI	CCWGG	5 cut(s)	681, 1526, 1760, 2364, 2418
Bst6I	CTCTTC	2 cut(s)	1065, 2256
BstAFI	CTTAAG	3 cut(s)	769, 1742, 2159
BstAPI	GCANNNNNTGC	1 cut(s)	1709
BstAUI	TGTACA	1 cut(s)	367
BstC8I	GCNNGC	6 cut(s)	87, 118, 348, 594, 2328, 2597
BstDEI	CTNAG	8 cut(s)	194, 463, 723, 800, 1416, 1841, 2059, 2616
BstFNI	CGCG	3 cut(s)	72, 111, 182
BstHHI	GCGC	1 cut(s)	72
BstMAI	GTCTC	2 cut(s)	321, 2076
BstMWI	GCNNNNNNNGC	8 cut(s)	117, 199, 662, 801, 1634, 1709, 1718, 2572
BstNI	CCWGG	5 cut(s)	681, 1526, 1760, 2364, 2418
BstNSI	RCATGY	2 cut(s)	374, 2016
BstSCI	CCNGG	8 cut(s)	102, 337, 679, 763, 1524, 1758, 2362, 2416
BstSFI	CTRYAG	3 cut(s)	1047, 2305, 2545
BstSLI	GKGCMC	2 cut(s)	179, 1247
BstUI	CGCG	3 cut(s)	72, 111, 182
BstV1I	GCAGC	3 cut(s)	1649, 1687, 2550
BstV2I	GAAGAC	2 cut(s)	888, 975
BstX2I	RGATCY	1 cut(s)	541
BstYI	RGATCY	1 cut(s)	541
Bsu15I	ATCGAT	1 cut(s)	396
Bsu36I	CCTNAGG	2 cut(s)	463, 2616
BsuI	GTATCC	1 cut(s)	724
BsuRI	GGCC	8 cut(s)	89, 116, 346, 461, 596, 717, 1121, 1794
BsuTUI	ATCGAT	1 cut(s)	396
BtgZI	GCGATG	1 cut(s)	93
BtsIMutI	CAGTG	3 cut(s)	179, 921, 2652
Cac8I	GCNNGC	6 cut(s)	87, 118, 348, 594, 2328, 2597
CaiI	CAGNNNCTG	1 cut(s)	545
CciI	TCATGA	2 cut(s)	571, 1318
CfoI	GCGC	1 cut(s)	72
Cfr10I	RCCGGY	1 cut(s)	85
Cfr13I	GGNCC	3 cut(s)	459, 1763, 2003
ClaI	ATCGAT	1 cut(s)	396
CseI	GACGC	1 cut(s)	1238
CspCI	CAANNNNNGTGG	2 cut(s)	1409, 1444
DdeI	CTNAG	8 cut(s)	194, 463, 723, 800, 1416, 1841, 2059, 2616
DrdI	GACNNNNNNGTC	2 cut(s)	584, 1535
DseDI	GACNNNNNNGTC	2 cut(s)	584, 1535
EaeI	YGGCCR	4 cut(s)	87, 715, 1119, 1792
Eam1104I	CTCTTC	2 cut(s)	1065, 2256
EarI	CTCTTC	2 cut(s)	1065, 2256
Ecl136II	GAGCTC	1 cut(s)	193
Eco130I	CCWWGG	2 cut(s)	130, 2374
Eco24I	GRGCYC	1 cut(s)	195
Eco32I	GATATC	1 cut(s)	394
Eco47I	GGWCC	2 cut(s)	1763, 2003
Eco53kI	GAGCTC	1 cut(s)	193
Eco57I	CTGAAG	2 cut(s)	762, 1209
Eco81I	CCTNAGG	2 cut(s)	463, 2616
EcoICRI	GAGCTC	1 cut(s)	193
EcoO109I	RGGNCCY	2 cut(s)	459, 1763
EcoRI	GAATTC	1 cut(s)	607
EcoRII	CCWGG	5 cut(s)	679, 1524, 1758, 2362, 2416
EcoRV	GATATC	1 cut(s)	394
EcoT14I	CCWWGG	2 cut(s)	130, 2374
EcoT22I	ATGCAT	1 cut(s)	817
EcoT38I	GRGCYC	1 cut(s)	195
ErhI	CCWWGG	2 cut(s)	130, 2374
Esp3I	CGTCTC	1 cut(s)	2076
FalI	AAGNNNNNCTT	2 cut(s)	2261, 2293
FaqI	GGGAC	4 cut(s)	955, 1749, 2479, 2612
FauI	CCCGC	1 cut(s)	187
FauNDI	CATATG	2 cut(s)	1344, 2535
FbaI	TGATCA	1 cut(s)	1315
Fnu4HI	GCNGC	5 cut(s)	73, 76, 1638, 1701, 2564
FriOI	GRGCYC	1 cut(s)	195
Fsp4HI	GCNGC	5 cut(s)	73, 76, 1638, 1701, 2564
FspBI	CTAG	7 cut(s)	219, 488, 945, 1442, 1670, 1751, 1916
GlaI	GCGC	1 cut(s)	71
GluI	GCNGC	5 cut(s)	73, 76, 1638, 1701, 2564
GsuI	CTGGAG	1 cut(s)	2124
HaeIII	GGCC	8 cut(s)	89, 116, 346, 461, 596, 717, 1121, 1794
HapII	CCGG	4 cut(s)	86, 103, 339, 765
HgaI	GACGC	1 cut(s)	1238
HhaI	GCGC	1 cut(s)	72
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HincII	GTYRAC	5 cut(s)	363, 904, 1228, 2074, 2488
HindII	GTYRAC	5 cut(s)	363, 904, 1228, 2074, 2488
HindIII	AAGCTT	2 cut(s)	266, 2435
HpaII	CCGG	4 cut(s)	86, 103, 339, 765
HphI	GGTGA	5 cut(s)	452, 1526, 1597, 1787, 2048
Hpy166II	GTNNAC	9 cut(s)	295, 363, 904, 1185, 1228, 1245, 1431, 2074, 2488
Hpy8I	GTNNAC	9 cut(s)	295, 363, 904, 1185, 1228, 1245, 1431, 2074, 2488
Hpy99I	CGWCG	5 cut(s)	14, 56, 125, 326, 1127
HpyAV	CCTTC	7 cut(s)	308, 590, 931, 1342, 2379, 2416, 2618
HpyCH4IV	ACGT	1 cut(s)	1836
HpyF10VI	GCNNNNNNNGC	8 cut(s)	117, 199, 662, 801, 1634, 1709, 1718, 2572
HpyF3I	CTNAG	8 cut(s)	194, 463, 723, 800, 1416, 1841, 2059, 2616
HpySE526I	ACGT	1 cut(s)	1836
HspAI	GCGC	1 cut(s)	70
KflI	GGGWCCC	1 cut(s)	1763
KroI	GCCGGC	1 cut(s)	85
KroNI	GCCGGC	1 cut(s)	87
Ksp22I	TGATCA	1 cut(s)	1315
LmnI	GCTCC	2 cut(s)	1625, 1718
Lsp1109I	GCAGC	3 cut(s)	1649, 1687, 2550
LweI	GCATC	5 cut(s)	145, 544, 824, 1066, 1747
MaeI	CTAG	7 cut(s)	219, 488, 945, 1442, 1670, 1751, 1916
MaeII	ACGT	1 cut(s)	1836
MaeIII	GTNAC	6 cut(s)	1095, 1103, 1672, 2101, 2255, 2341
MboII	GAAGA	8 cut(s)	847, 888, 980, 1082, 1172, 1223, 1904, 2273
MflI	RGATCY	1 cut(s)	541
MhlI	GDGCHC	3 cut(s)	179, 195, 1247
MlsI	TGGCCA	1 cut(s)	717
MluNI	TGGCCA	1 cut(s)	717
MlyI	GAGTC	6 cut(s)	119, 1756, 1912, 1947, 2131, 2493
MmeI	TCCRAC	8 cut(s)	33, 345, 708, 1517, 1519, 1548, 1838, 2465
Mox20I	TGGCCA	1 cut(s)	717
Mph1103I	ATGCAT	1 cut(s)	817
MroNI	GCCGGC	1 cut(s)	85
MroXI	GAANNNNTTC	1 cut(s)	98
MscI	TGGCCA	1 cut(s)	717
MslI	CAYNNNNRTG	5 cut(s)	564, 602, 681, 1397, 1692
Msp20I	TGGCCA	1 cut(s)	717
MspA1I	CMGCKG	2 cut(s)	827, 1640
MspCI	CTTAAG	3 cut(s)	769, 1742, 2159
MspI	CCGG	4 cut(s)	86, 103, 339, 765
MspR9I	CCNGG	8 cut(s)	104, 339, 681, 765, 1526, 1760, 2364, 2418
Mva1269I	GAATGC	1 cut(s)	934
MvaI	CCWGG	5 cut(s)	681, 1526, 1760, 2364, 2418
MvnI	CGCG	3 cut(s)	72, 111, 182
MwoI	GCNNNNNNNGC	8 cut(s)	117, 199, 662, 801, 1634, 1709, 1718, 2572
NaeI	GCCGGC	1 cut(s)	87
NciI	CCSGG	3 cut(s)	104, 339, 765
NdeI	CATATG	2 cut(s)	1344, 2535
NgoMIV	GCCGGC	1 cut(s)	85
NlaIV	GGNNCC	8 cut(s)	282, 319, 1390, 1523, 1764, 1765, 1812, 2361
NmeAIII	GCCGAG	1 cut(s)	958
NmuCI	GTSAC	4 cut(s)	1103, 1672, 2255, 2341
NsiI	ATGCAT	1 cut(s)	817
NspI	RCATGY	2 cut(s)	374, 2016
PagI	TCATGA	2 cut(s)	571, 1318
PasI	CCCWGGG	1 cut(s)	1759
PcsI	WCGNNNNNNNCGW	1 cut(s)	2082
PctI	GAATGC	1 cut(s)	934
PdiI	GCCGGC	1 cut(s)	87
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	4 cut(s)	16, 820, 1007, 1082
PflMI	CCANNNNNTGG	1 cut(s)	2447
PfoI	TCCNGGA	2 cut(s)	102, 2416
PkrI	GCNGC	5 cut(s)	74, 77, 1639, 1702, 2565
PleI	GAGTC	6 cut(s)	119, 1755, 1911, 1947, 2131, 2493
PpsI	GAGTC	6 cut(s)	119, 1755, 1911, 1947, 2131, 2493
PpuMI	RGGWCCY	1 cut(s)	1763
PshBI	ATTAAT	2 cut(s)	252, 1647
Psp124BI	GAGCTC	1 cut(s)	195
Psp5II	RGGWCCY	1 cut(s)	1763
Psp6I	CCWGG	5 cut(s)	679, 1524, 1758, 2362, 2416
PspGI	CCWGG	5 cut(s)	679, 1524, 1758, 2362, 2416
PspN4I	GGNNCC	8 cut(s)	282, 319, 1390, 1523, 1764, 1765, 1812, 2361
PspPI	GGNCC	3 cut(s)	459, 1763, 2003
PspPPI	RGGWCCY	1 cut(s)	1763
PstNI	CAGNNNCTG	1 cut(s)	545
PsuI	RGATCY	1 cut(s)	541
PvuII	CAGCTG	1 cut(s)	1640
RseI	CAYNNNNRTG	5 cut(s)	564, 602, 681, 1397, 1692
SacI	GAGCTC	1 cut(s)	195
SatI	GCNGC	5 cut(s)	73, 76, 1638, 1701, 2564
Sau96I	GGNCC	3 cut(s)	459, 1763, 2003
ScaI	AGTACT	2 cut(s)	775, 1325
SchI	GAGTC	6 cut(s)	119, 1756, 1912, 1947, 2131, 2493
ScrFI	CCNGG	8 cut(s)	104, 339, 681, 765, 1526, 1760, 2364, 2418
SduI	GDGCHC	3 cut(s)	179, 195, 1247
SfaNI	GCATC	5 cut(s)	145, 544, 824, 1066, 1747
SfcI	CTRYAG	3 cut(s)	1047, 2305, 2545
SinI	GGWCC	2 cut(s)	1763, 2003
SmiMI	CAYNNNNRTG	5 cut(s)	564, 602, 681, 1397, 1692
SmlI	CTYRAG	5 cut(s)	269, 769, 1713, 1742, 2159
SmoI	CTYRAG	5 cut(s)	269, 769, 1713, 1742, 2159
SpeI	ACTAGT	3 cut(s)	487, 944, 1669
SsiI	CCGC	5 cut(s)	72, 75, 180, 827, 1259
SspMI	CTAG	7 cut(s)	219, 488, 945, 1442, 1670, 1751, 1916
SstI	GAGCTC	1 cut(s)	195
StyD4I	CCNGG	8 cut(s)	102, 337, 679, 763, 1524, 1758, 2362, 2416
StyI	CCWWGG	2 cut(s)	130, 2374
TaiI	ACGT	1 cut(s)	1839
TaqI	TCGA	7 cut(s)	59, 396, 818, 1068, 1859, 2135, 2478
TatI	WGTACW	4 cut(s)	367, 773, 1323, 1451
TauI	GCSGC	2 cut(s)	75, 78
TfiI	GAWTC	4 cut(s)	16, 820, 1007, 1082
TscAI	CASTG	3 cut(s)	179, 921, 2659
TseFI	GTSAC	4 cut(s)	1103, 1672, 2255, 2341
TseI	GCWGC	3 cut(s)	1637, 1700, 2563
Tsp45I	GTSAC	4 cut(s)	1103, 1672, 2255, 2341
TspGWI	ACGGA	4 cut(s)	221, 339, 1091, 1460
TspRI	CASTG	3 cut(s)	179, 921, 2659
Van91I	CCANNNNNTGG	1 cut(s)	2447
Vha464I	CTTAAG	3 cut(s)	769, 1742, 2159
VneI	GTGCAC	1 cut(s)	1243
VpaK11BI	GGWCC	2 cut(s)	1763, 2003
VspI	ATTAAT	2 cut(s)	252, 1647
XapI	RAATTY	6 cut(s)	62, 98, 607, 844, 1617, 1725
XbaI	TCTAGA	1 cut(s)	1441
XceI	RCATGY	2 cut(s)	374, 2016
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	7 cut(s)	219, 488, 945, 1442, 1670, 1751, 1916
ZrmI	AGTACT	2 cut(s)	775, 1325
Zsp2I	ATGCAT	1 cut(s)	817

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.