Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000517.1

Orthogroup ID

OG0010407

Physical Location & Seq

Genomic Coordinates Forward (+)

11288 .. 15995

Gene Structure 4708 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000517.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

atgaaatccgacgggattcgggtgatttttctgatctgtttaattctttgcgacggctcgaaattggttcgcggcgccgatgagccggccaagaataaattccgggaacgcgaggccagcgatgactcccttggctatccaaacatagatgaggatgcgttgttgaatacacagtgccctgcgaaattggagctcagatggcaaacggaagttagttctagtatctatgctacgccattgatctccgatattaatagtgatggaaagcttgagattgtggtgccatcttttgttcactatcttgaagttttggaaggttccgacggagacaaactccccggttggcctgcttttcatcagtcaactgtacatgcaagtcctctcctgtatgatatcgataaggatggtgtgagagagatagctctagcaacctacaatggtgaagttctctttttcagggtctcaggctacatgatggtagataaactagtagtacctcgtaggaaagttaaaaagaattggtttgggggtttgcatccagatcccgttgatcgtacccatccagatgttcatgatgaccttcttgtcatgcaggccactagtatgaattcaaatcctcaaacagaggaaaatacaactaaaataaacaattctgctactgttgcaacagaaagccatcctggtgttcatcctggtgttaatacttcaacttctgtttccaatgatggccatcctgagttagatactaatactactgtttcaaaagaaagtgatcccggcttaagtactccagctaaaaacgaaagccaccttagcatggtcaaggcatcaaatccagaggttgagaagaaagcaaatttaagtccgttagaaacagacatcaagcaatctacaagcacagagaagtcttctgtcaacaatgtgccagtggaaactctgaatgccgagaaggggactagttcggttagacggcttttggaggacaacaattcaagcaaatcacaggatggtggttctgaatccaaagataataataaggaggacattcctgttgcaactgtagaaaatgatggtgttcttgaagaggatgctgattcatcttttgagttactccgtgacaatgatgaactggccgacgagtataactatgactatgatgattatgttgatgaagaaatgtggggagatgaggagtggactgaagtgcaacacgagaaaatagaagattatgtcaatgttgacgcacacatcttgtgcactcctgtcatagcggacattgataatgatggaatatcagaaatggttgttgccgtttcttacttttttgatcatgagtactatgacaacccagagcatatgaaggaattgggtggcattgatataggaaaatatgtagctggttccattgttgtgttcaacctcgacactaaacaagtaaagtggactgctgatctagatttgagtacagagactggaacattccgtgcttacatatattcctctccgactgtcgttgatttggatggtgatgggaacctggacattcttgtcggaacttcatttggcttgttctatgtgttagatcatcatggcaaggtgagggaaaagttccctcttgaaatggctgaaattcaaggagctgttgttgcagctgatattaatgatgatggaaaaattgaactagtgactactgatgctcatggaaatgttgctgcatggactgctcaaggagtagaaatttgggaaacgcatcttaagagtctagttccccagggtcccaccattggtgatgttgatggggatggccgtactgatgttgtggttccaacactatcagggaacatatacgttcttagtggcaaagatgggttgattgttcgtccttatccatatagaactcatgggagggttatgagtcaagttcttctagtggatttaagtaaaaaaggagagaaaaagaaaggactcactcttgctacaacatcatttgatggatatttgtaccttattgatggaccaacagcatgtgcagatgttgttgatattggtgaaacttcatatagcatggtcttagcagataatgttgacggtggagacgatcttgatcttattgttacaaccatgaatggcaatgtttattgcttctcgactccagcttcacatcatccccttaaggcatggagagtacctaatcaggggagaaatcatcttgcaaataggtacaaccgtcaaggtatctttgttaaacattcatcaagagcttttcgtgacgaagagggcaagaacttctttgtggaggttgagatcatagatgactatagatacccatctgggttgcaagccccatacactgtcacaacaaccttgttggtgcctggtaattaccaaggagagagaaggataaagacaaaccagaccttcaatcgtcctggaaagtatcgtataaagcttccaacagttggtgtaaggactactgggactgttgtggtcgagatggttgacaagaatggactctatttttcagatgatttctccctcacattccatatgtattactacagactgttaaagtggctgcttgtcctgccaatgttggggatgtttggcgtgcttgtaatccttcgtccgcatgaagctgtgcctttgccatcattttcacgaaacactgactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0007275 GO:0008150 GO:0009555 GO:0009653 GO:0009987 GO:0010208 GO:0010584 GO:0010927 GO:0012505 GO:0016020 GO:0016043 GO:0022607 GO:0030198 GO:0032501 GO:0032502 GO:0032989 GO:0043062 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0046872 GO:0048229 GO:0048646 GO:0048856 GO:0048869 GO:0071840 GO:0085029

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FG-GAP VCBS

Protein Analysis

890

Amino Acids

98.71

Weight (kDa)

4.72

Isoelectric Point (pI)

31.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010407)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09090 AT3G09090 AT3G09090
fragaria_vesca	FvH4_6g12060
malus_domestica	MD04G1146700.v1.1 MD12G1159900.v1.1
prunus_persica	Prupe.6G270500_v2.0.a1
pyrus_communis	pycom04g13250 pycom12g15180
rosa_chinensis	RchiOBHm_Chr3g0463901 RchiOBHm_Chr3g0463911
rosa_laevigata	RLG00000024737 RLG00000024746
rosa_multiflora	Rmu_sc0000517.1_g000002
rosa_roxburghii	Rroxscaffold_6G00416150
rosa_rugosa	Rorug03G0069100
rosa_samantha	Rh3AG126100 Rh3BG130100 Rh3CG132600 Rh3DG131300
rosa_wichuraiana	Rw3G010640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	584, 1547
AccB1I	GGYRCC	3 cut(s)	74, 280, 2371
AccB7I	CCANNNNNTGG	1 cut(s)	2459
AccII	CGCG	2 cut(s)	72, 111
AciI	CCGC	3 cut(s)	72, 1271, 2627
AclWI	GGATC	2 cut(s)	536, 767
AcoI	YGGCCR	4 cut(s)	87, 727, 1131, 1804
AcsI	RAATTY	5 cut(s)	98, 607, 856, 1629, 1737
AcuI	CTGAAG	1 cut(s)	1221
AcyI	GRCGYC	1 cut(s)	75
AfiI	CCNNNNNNNGG	6 cut(s)	817, 951, 1784, 2195, 2459, 2594
AflII	CTTAAG	3 cut(s)	781, 1754, 2171
AhlI	ACTAGT	4 cut(s)	487, 599, 956, 1681
AjnI	CCWGG	6 cut(s)	679, 691, 1536, 1770, 2374, 2428
AjuI	GAANNNNNNNTTGG	2 cut(s)	83, 115
Alw21I	GWGCWC	2 cut(s)	195, 1259
Alw26I	GTCTC	4 cut(s)	321, 466, 1463, 2088
Alw44I	GTGCAC	1 cut(s)	1255
AlwI	GGATC	2 cut(s)	536, 767
AlwNI	CAGNNNCTG	1 cut(s)	1472
AoxI	GGCC	7 cut(s)	87, 114, 344, 594, 727, 1131, 1804
ApaLI	GTGCAC	1 cut(s)	1255
ApeKI	GCWGC	3 cut(s)	1649, 1712, 2575
ApoI	RAATTY	5 cut(s)	98, 607, 856, 1629, 1737
AseI	ATTAAT	2 cut(s)	252, 1659
Asp700I	GAANNNNTTC	1 cut(s)	98
AspLEI	GCGC	1 cut(s)	77
AspS9I	GGNCC	2 cut(s)	1775, 2015
AsuC2I	CCSGG	3 cut(s)	104, 339, 777
AsuHPI	GGTGA	6 cut(s)	34, 452, 1538, 1609, 1799, 2060
AvaII	GGWCC	2 cut(s)	1775, 2015
BaeGI	GKGCMC	2 cut(s)	179, 1259
BaeI	ACNNNNGTAYC	2 cut(s)	2212, 2245
BalI	TGGCCA	1 cut(s)	729
BanI	GGYRCC	3 cut(s)	74, 280, 2371
BanII	GRGCYC	1 cut(s)	195
BauI	CACGAG	1 cut(s)	1211
BbsI	GAAGAC	1 cut(s)	900
Bbv12I	GWGCWC	2 cut(s)	195, 1259
BbvI	GCAGC	3 cut(s)	1661, 1699, 2562
BceAI	ACGGC	4 cut(s)	70, 986, 1295, 1791
BciT130I	CCWGG	6 cut(s)	681, 693, 1538, 1772, 2376, 2430
BclI	TGATCA	1 cut(s)	1327
BcnI	CCSGG	3 cut(s)	104, 339, 777
BcoDI	GTCTC	4 cut(s)	321, 466, 1463, 2088
BcuI	ACTAGT	4 cut(s)	487, 599, 956, 1681
BfaI	CTAG	9 cut(s)	219, 425, 488, 600, 957, 1454, 1682, 1763, 1928
BfmI	CTRYAG	3 cut(s)	1059, 2317, 2557
BfoI	RGCGCY	1 cut(s)	78
BfrI	CTTAAG	3 cut(s)	781, 1754, 2171
BisI	GCNGC	4 cut(s)	73, 1650, 1713, 2576
BlsI	GCNGC	4 cut(s)	74, 1651, 1714, 2577
BmcAI	AGTACT	2 cut(s)	787, 1337
Bme1390I	CCNGG	9 cut(s)	104, 339, 681, 693, 777, 1538, 1772, 2376, 2430
Bme18I	GGWCC	2 cut(s)	1775, 2015
BmgT120I	GGNCC	2 cut(s)	1775, 2015
BmiI	GGNNCC	9 cut(s)	76, 282, 319, 1402, 1535, 1776, 1777, 1824, 2373
BmrFI	CCNGG	9 cut(s)	104, 339, 681, 693, 777, 1538, 1772, 2376, 2430
BmrI	ACTGGG	1 cut(s)	2484
BmsI	GCATC	6 cut(s)	145, 544, 836, 1078, 1684, 1759
BmuI	ACTGGG	1 cut(s)	2484
BpiI	GAAGAC	1 cut(s)	900
BplI	GAGNNNNNCTC	2 cut(s)	318, 350
BpmI	CTGGAG	2 cut(s)	774, 2136
Bpu10I	CCTNAGC	1 cut(s)	812
BpuEI	CTTGAG	2 cut(s)	290, 1710
BpuMI	CCSGG	3 cut(s)	104, 339, 777
Bsa29I	ATCGAT	1 cut(s)	396
BsaBI	GATNNNNATC	3 cut(s)	729, 2103, 2326
BsaHI	GRCGYC	1 cut(s)	75
BsaI	GGTCTC	1 cut(s)	466
BsaJI	CCNNGG	5 cut(s)	130, 337, 1770, 1771, 2386
BsaXI	ACNNNNNCTCC	2 cut(s)	1629, 1659
Bsc4I	CCNNNNNNNGG	6 cut(s)	817, 951, 1784, 2195, 2459, 2594
Bse118I	RCCGGY	1 cut(s)	85
Bse1I	ACTGG	4 cut(s)	926, 1134, 1477, 2479
Bse3DI	GCAATG	1 cut(s)	2137
Bse8I	GATNNNNATC	3 cut(s)	729, 2103, 2326
BseBI	CCWGG	6 cut(s)	681, 693, 1538, 1772, 2376, 2430
BseCI	ATCGAT	1 cut(s)	396
BseDI	CCNNGG	5 cut(s)	130, 337, 1770, 1771, 2386
BseJI	GATNNNNATC	3 cut(s)	729, 2103, 2326
BseLI	CCNNNNNNNGG	6 cut(s)	817, 951, 1784, 2195, 2459, 2594
BseMI	GCAATG	1 cut(s)	2137
BseMII	CTCAG	3 cut(s)	208, 477, 726
BseNI	ACTGG	4 cut(s)	926, 1134, 1477, 2479
BseRI	GAGGAG	1 cut(s)	1205
BseSI	GKGCMC	2 cut(s)	179, 1259
BseXI	GCAGC	3 cut(s)	1661, 1699, 2562
BsgI	GTGCAG	1 cut(s)	2049
Bsh1236I	CGCG	2 cut(s)	72, 111
BshFI	GGCC	7 cut(s)	89, 116, 346, 596, 729, 1133, 1806
BshNI	GGYRCC	3 cut(s)	74, 280, 2371
BshVI	ATCGAT	1 cut(s)	396
BsiHKAI	GWGCWC	2 cut(s)	195, 1259
BsiSI	CCGG	4 cut(s)	86, 103, 339, 777
BslFI	GGGAC	3 cut(s)	967, 1761, 2491
BslI	CCNNNNNNNGG	6 cut(s)	817, 951, 1784, 2195, 2459, 2594
BsmAI	GTCTC	4 cut(s)	321, 466, 1463, 2088
BsmBI	CGTCTC	1 cut(s)	2088
BsmFI	GGGAC	3 cut(s)	967, 1761, 2491
BsmI	GAATGC	1 cut(s)	946
BsnI	GGCC	7 cut(s)	89, 116, 346, 596, 729, 1133, 1806
Bso31I	GGTCTC	1 cut(s)	466
Bsp1286I	GDGCHC	3 cut(s)	179, 195, 1259
Bsp1407I	TGTACA	1 cut(s)	367
BspACI	CCGC	3 cut(s)	72, 1271, 2627
BspANI	GGCC	7 cut(s)	89, 116, 346, 596, 729, 1133, 1806
BspCNI	CTCAG	3 cut(s)	207, 476, 727
BspDI	ATCGAT	1 cut(s)	396
BspFNI	CGCG	2 cut(s)	72, 111
BspHI	TCATGA	2 cut(s)	571, 1330
BspLI	GGNNCC	9 cut(s)	76, 282, 319, 1402, 1535, 1776, 1777, 1824, 2373
BspPI	GGATC	2 cut(s)	536, 767
BspT107I	GGYRCC	3 cut(s)	74, 280, 2371
BspTI	CTTAAG	3 cut(s)	781, 1754, 2171
BspTNI	GGTCTC	1 cut(s)	466
BsrDI	GCAATG	1 cut(s)	2137
BsrFI	RCCGGY	1 cut(s)	85
BsrGI	TGTACA	1 cut(s)	367
BsrI	ACTGG	4 cut(s)	926, 1134, 1477, 2479
BssAI	RCCGGY	1 cut(s)	85
BssECI	CCNNGG	5 cut(s)	130, 337, 1770, 1771, 2386
BssNI	GRCGYC	1 cut(s)	75
BssSI	CACGAG	1 cut(s)	1211
BssT1I	CCWWGG	2 cut(s)	130, 2386
Bst2BI	CACGAG	1 cut(s)	1211
Bst2UI	CCWGG	6 cut(s)	681, 693, 1538, 1772, 2376, 2430
Bst6I	CTCTTC	2 cut(s)	1077, 2268
BstACI	GRCGYC	1 cut(s)	75
BstAFI	CTTAAG	3 cut(s)	781, 1754, 2171
BstAPI	GCANNNNNTGC	1 cut(s)	1721
BstAUI	TGTACA	1 cut(s)	367
BstC8I	GCNNGC	6 cut(s)	87, 118, 348, 594, 2340, 2609
BstDEI	CTNAG	6 cut(s)	194, 463, 735, 812, 1853, 2071
BstFNI	CGCG	2 cut(s)	72, 111
BstH2I	RGCGCY	1 cut(s)	78
BstHHI	GCGC	1 cut(s)	77
BstMAI	GTCTC	4 cut(s)	321, 466, 1463, 2088
BstMWI	GCNNNNNNNGC	7 cut(s)	117, 199, 662, 813, 1646, 1721, 2584
BstNI	CCWGG	6 cut(s)	681, 693, 1538, 1772, 2376, 2430
BstNSI	RCATGY	2 cut(s)	374, 2028
BstSCI	CCNGG	9 cut(s)	102, 337, 679, 691, 775, 1536, 1770, 2374, 2428
BstSFI	CTRYAG	3 cut(s)	1059, 2317, 2557
BstSLI	GKGCMC	2 cut(s)	179, 1259
BstUI	CGCG	2 cut(s)	72, 111
BstV1I	GCAGC	3 cut(s)	1661, 1699, 2562
BstV2I	GAAGAC	1 cut(s)	900
BstX2I	RGATCY	1 cut(s)	541
BstYI	RGATCY	1 cut(s)	541
Bsu15I	ATCGAT	1 cut(s)	396
BsuRI	GGCC	7 cut(s)	89, 116, 346, 596, 729, 1133, 1806
BsuTUI	ATCGAT	1 cut(s)	396
BtgZI	GCGATG	1 cut(s)	135
BtsIMutI	CAGTG	4 cut(s)	179, 933, 2349, 2664
Cac8I	GCNNGC	6 cut(s)	87, 118, 348, 594, 2340, 2609
CaiI	CAGNNNCTG	1 cut(s)	1472
CciI	TCATGA	2 cut(s)	571, 1330
CfoI	GCGC	1 cut(s)	77
Cfr10I	RCCGGY	1 cut(s)	85
Cfr13I	GGNCC	2 cut(s)	1775, 2015
ClaI	ATCGAT	1 cut(s)	396
CseI	GACGC	1 cut(s)	1250
CspCI	CAANNNNNGTGG	2 cut(s)	1421, 1456
DdeI	CTNAG	6 cut(s)	194, 463, 735, 812, 1853, 2071
DinI	GGCGCC	1 cut(s)	76
DrdI	GACNNNNNNGTC	2 cut(s)	584, 1547
DseDI	GACNNNNNNGTC	2 cut(s)	584, 1547
EaeI	YGGCCR	4 cut(s)	87, 727, 1131, 1804
Eam1104I	CTCTTC	2 cut(s)	1077, 2268
EarI	CTCTTC	2 cut(s)	1077, 2268
Ecl136II	GAGCTC	1 cut(s)	193
Eco130I	CCWWGG	2 cut(s)	130, 2386
Eco24I	GRGCYC	1 cut(s)	195
Eco31I	GGTCTC	1 cut(s)	466
Eco32I	GATATC	1 cut(s)	394
Eco47I	GGWCC	2 cut(s)	1775, 2015
Eco53kI	GAGCTC	1 cut(s)	193
Eco57I	CTGAAG	1 cut(s)	1221
EcoICRI	GAGCTC	1 cut(s)	193
EcoO109I	RGGNCCY	1 cut(s)	1775
EcoRI	GAATTC	1 cut(s)	607
EcoRII	CCWGG	6 cut(s)	679, 691, 1536, 1770, 2374, 2428
EcoRV	GATATC	1 cut(s)	394
EcoT14I	CCWWGG	2 cut(s)	130, 2386
EcoT38I	GRGCYC	1 cut(s)	195
EgeI	GGCGCC	1 cut(s)	76
EheI	GGCGCC	1 cut(s)	76
ErhI	CCWWGG	2 cut(s)	130, 2386
Esp3I	CGTCTC	1 cut(s)	2088
FalI	AAGNNNNNCTT	2 cut(s)	2273, 2305
FaqI	GGGAC	3 cut(s)	967, 1761, 2491
FauNDI	CATATG	2 cut(s)	1356, 2547
FbaI	TGATCA	1 cut(s)	1327
Fnu4HI	GCNGC	4 cut(s)	73, 1650, 1713, 2576
FriOI	GRGCYC	1 cut(s)	195
Fsp4HI	GCNGC	4 cut(s)	73, 1650, 1713, 2576
FspBI	CTAG	9 cut(s)	219, 425, 488, 600, 957, 1454, 1682, 1763, 1928
GlaI	GCGC	1 cut(s)	76
GluI	GCNGC	4 cut(s)	73, 1650, 1713, 2576
GsuI	CTGGAG	2 cut(s)	774, 2136
HaeII	RGCGCY	1 cut(s)	78
HaeIII	GGCC	7 cut(s)	89, 116, 346, 596, 729, 1133, 1806
HapII	CCGG	4 cut(s)	86, 103, 339, 777
HgaI	GACGC	1 cut(s)	1250
HhaI	GCGC	1 cut(s)	77
Hin1I	GRCGYC	1 cut(s)	75
Hin6I	GCGC	1 cut(s)	75
HinP1I	GCGC	1 cut(s)	75
HincII	GTYRAC	5 cut(s)	363, 916, 1240, 2086, 2500
HindII	GTYRAC	5 cut(s)	363, 916, 1240, 2086, 2500
HindIII	AAGCTT	2 cut(s)	266, 2447
HinfI	GANTC	9 cut(s)	16, 125, 1019, 1094, 1759, 1915, 1965, 2149, 2511
HpaII	CCGG	4 cut(s)	86, 103, 339, 777
HphI	GGTGA	6 cut(s)	34, 452, 1538, 1609, 1799, 2060
Hpy166II	GTNNAC	9 cut(s)	295, 363, 916, 1197, 1240, 1257, 1443, 2086, 2500
Hpy8I	GTNNAC	9 cut(s)	295, 363, 916, 1197, 1240, 1257, 1443, 2086, 2500
Hpy99I	CGWCG	4 cut(s)	14, 56, 326, 1139
HpyAV	CCTTC	7 cut(s)	308, 590, 943, 1354, 2391, 2428, 2630
HpyCH4IV	ACGT	1 cut(s)	1848
HpyF10VI	GCNNNNNNNGC	7 cut(s)	117, 199, 662, 813, 1646, 1721, 2584
HpyF3I	CTNAG	6 cut(s)	194, 463, 735, 812, 1853, 2071
HpySE526I	ACGT	1 cut(s)	1848
Hsp92I	GRCGYC	1 cut(s)	75
HspAI	GCGC	1 cut(s)	75
KasI	GGCGCC	1 cut(s)	74
KflI	GGGWCCC	1 cut(s)	1775
KroI	GCCGGC	1 cut(s)	85
KroNI	GCCGGC	1 cut(s)	87
Ksp22I	TGATCA	1 cut(s)	1327
LmnI	GCTCC	2 cut(s)	190, 1637
Lsp1109I	GCAGC	3 cut(s)	1661, 1699, 2562
LweI	GCATC	6 cut(s)	145, 544, 836, 1078, 1684, 1759
MaeI	CTAG	9 cut(s)	219, 425, 488, 600, 957, 1454, 1682, 1763, 1928
MaeII	ACGT	1 cut(s)	1848
MaeIII	GTNAC	6 cut(s)	1107, 1115, 1684, 2113, 2267, 2353
MboII	GAAGA	7 cut(s)	859, 900, 1094, 1184, 1235, 1916, 2285
MflI	RGATCY	1 cut(s)	541
MhlI	GDGCHC	3 cut(s)	179, 195, 1259
MlsI	TGGCCA	1 cut(s)	729
MluNI	TGGCCA	1 cut(s)	729
Mly113I	GGCGCC	1 cut(s)	75
MlyI	GAGTC	6 cut(s)	119, 1768, 1924, 1959, 2143, 2505
MmeI	TCCRAC	6 cut(s)	33, 345, 1529, 1531, 1850, 2477
Mox20I	TGGCCA	1 cut(s)	729
MroNI	GCCGGC	1 cut(s)	85
MroXI	GAANNNNTTC	1 cut(s)	98
MscI	TGGCCA	1 cut(s)	729
MslI	CAYNNNNRTG	6 cut(s)	564, 602, 681, 693, 1409, 1704
Msp20I	TGGCCA	1 cut(s)	729
MspA1I	CMGCKG	1 cut(s)	1652
MspCI	CTTAAG	3 cut(s)	781, 1754, 2171
MspI	CCGG	4 cut(s)	86, 103, 339, 777
MspR9I	CCNGG	9 cut(s)	104, 339, 681, 693, 777, 1538, 1772, 2376, 2430
Mva1269I	GAATGC	1 cut(s)	946
MvaI	CCWGG	6 cut(s)	681, 693, 1538, 1772, 2376, 2430
MvnI	CGCG	2 cut(s)	72, 111
MwoI	GCNNNNNNNGC	7 cut(s)	117, 199, 662, 813, 1646, 1721, 2584
NaeI	GCCGGC	1 cut(s)	87
NarI	GGCGCC	1 cut(s)	75
NciI	CCSGG	3 cut(s)	104, 339, 777
NdeI	CATATG	2 cut(s)	1356, 2547
NgoMIV	GCCGGC	1 cut(s)	85
NlaIV	GGNNCC	9 cut(s)	76, 282, 319, 1402, 1535, 1776, 1777, 1824, 2373
NmeAIII	GCCGAG	1 cut(s)	970
NmuCI	GTSAC	4 cut(s)	1115, 1684, 2267, 2353
NspI	RCATGY	2 cut(s)	374, 2028
PagI	TCATGA	2 cut(s)	571, 1330
PasI	CCCWGGG	1 cut(s)	1771
PcsI	WCGNNNNNNNCGW	1 cut(s)	2094
PctI	GAATGC	1 cut(s)	946
PdiI	GCCGGC	1 cut(s)	87
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	3 cut(s)	16, 1019, 1094
PflMI	CCANNNNNTGG	1 cut(s)	2459
PfoI	TCCNGGA	2 cut(s)	102, 2428
PkrI	GCNGC	4 cut(s)	74, 1651, 1714, 2577
PleI	GAGTC	6 cut(s)	119, 1767, 1923, 1959, 2143, 2505
PluTI	GGCGCC	1 cut(s)	78
PpsI	GAGTC	6 cut(s)	119, 1767, 1923, 1959, 2143, 2505
PpuMI	RGGWCCY	1 cut(s)	1775
PshBI	ATTAAT	2 cut(s)	252, 1659
Psp124BI	GAGCTC	1 cut(s)	195
Psp5II	RGGWCCY	1 cut(s)	1775
Psp6I	CCWGG	6 cut(s)	679, 691, 1536, 1770, 2374, 2428
PspGI	CCWGG	6 cut(s)	679, 691, 1536, 1770, 2374, 2428
PspN4I	GGNNCC	9 cut(s)	76, 282, 319, 1402, 1535, 1776, 1777, 1824, 2373
PspPI	GGNCC	2 cut(s)	1775, 2015
PspPPI	RGGWCCY	1 cut(s)	1775
PstNI	CAGNNNCTG	1 cut(s)	1472
PsuI	RGATCY	1 cut(s)	541
PvuII	CAGCTG	1 cut(s)	1652
RseI	CAYNNNNRTG	6 cut(s)	564, 602, 681, 693, 1409, 1704
SacI	GAGCTC	1 cut(s)	195
SatI	GCNGC	4 cut(s)	73, 1650, 1713, 2576
Sau96I	GGNCC	2 cut(s)	1775, 2015
ScaI	AGTACT	2 cut(s)	787, 1337
SchI	GAGTC	6 cut(s)	119, 1768, 1924, 1959, 2143, 2505
ScrFI	CCNGG	9 cut(s)	104, 339, 681, 693, 777, 1538, 1772, 2376, 2430
SduI	GDGCHC	3 cut(s)	179, 195, 1259
SfaNI	GCATC	6 cut(s)	145, 544, 836, 1078, 1684, 1759
SfcI	CTRYAG	3 cut(s)	1059, 2317, 2557
SfoI	GGCGCC	1 cut(s)	76
SinI	GGWCC	2 cut(s)	1775, 2015
SmiMI	CAYNNNNRTG	6 cut(s)	564, 602, 681, 693, 1409, 1704
SmlI	CTYRAG	5 cut(s)	269, 781, 1725, 1754, 2171
SmoI	CTYRAG	5 cut(s)	269, 781, 1725, 1754, 2171
SpeI	ACTAGT	4 cut(s)	487, 599, 956, 1681
SsiI	CCGC	3 cut(s)	72, 1271, 2627
SspDI	GGCGCC	1 cut(s)	74
SspMI	CTAG	9 cut(s)	219, 425, 488, 600, 957, 1454, 1682, 1763, 1928
SstI	GAGCTC	1 cut(s)	195
StyD4I	CCNGG	9 cut(s)	102, 337, 679, 691, 775, 1536, 1770, 2374, 2428
StyI	CCWWGG	2 cut(s)	130, 2386
TaiI	ACGT	1 cut(s)	1851
TaqI	TCGA	5 cut(s)	59, 396, 1422, 2147, 2490
TatI	WGTACW	4 cut(s)	367, 785, 1335, 1463
TauI	GCSGC	1 cut(s)	75
TfiI	GAWTC	3 cut(s)	16, 1019, 1094
TscAI	CASTG	4 cut(s)	179, 933, 2356, 2671
TseFI	GTSAC	4 cut(s)	1115, 1684, 2267, 2353
TseI	GCWGC	3 cut(s)	1649, 1712, 2575
Tsp45I	GTSAC	4 cut(s)	1115, 1684, 2267, 2353
TspGWI	ACGGA	5 cut(s)	221, 339, 855, 1103, 1472
TspRI	CASTG	4 cut(s)	179, 933, 2356, 2671
Van91I	CCANNNNNTGG	1 cut(s)	2459
Vha464I	CTTAAG	3 cut(s)	781, 1754, 2171
VneI	GTGCAC	1 cut(s)	1255
VpaK11BI	GGWCC	2 cut(s)	1775, 2015
VspI	ATTAAT	2 cut(s)	252, 1659
XapI	RAATTY	5 cut(s)	98, 607, 856, 1629, 1737
XbaI	TCTAGA	1 cut(s)	1453
XceI	RCATGY	2 cut(s)	374, 2028
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	9 cut(s)	219, 425, 488, 600, 957, 1454, 1682, 1763, 1928
ZrmI	AGTACT	2 cut(s)	787, 1337

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.