Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0015118

Physical Location & Seq

Genomic Coordinates Reverse (-)

26181128 .. 26183032

Gene Structure 1905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G279600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 888 bp

ATGGCCACAATCATCCAGCTCTCTCCAATTCACACGCCCTCTCTCCGCATATTCTCTTCTCATTCTTCCCAAAATACCCCTAGCCTCTCATTCTATTTACCAGCCAAAGCCCTCACCTTTCCCTCCATTTCTCTCAAACCCTACACCACAGCCAAGCCTCGCGCCTTGGTTGTCACTTCGGCTGTTAAGAGCCTCTCAGAGACCGAGCTGGTCCCCGTGCCCGCGGAGGCTGATGAAATCGCTGGAAAATTGCCGGCGGATACCGGAGTCTACGCCGTTTTCGACCAGAACGGTGAGCTTCAGTTCGTTGGCTTATCGAGGAACATAGCGGCAAGTGTTCTCACTCACCGGAAATCGTTGCCGGAGCTATGCTACTCCGTCAAGGTTGGGGTAGTAGATGAACCAGATAGGGCTGTCCTAACGCAATCTTGGAAATCATGGATGGAAGAACACATTAAAGCTACTGGGAAGGTCCCTCCAGGTAATGAATCAGGCAATGCCACCTGGGTCCGACAGCCACCGAGGAAGAAGCCTGATCTCCGGCTAACACCCGGTCGCCATGTGCAGCTGACAGTGCCATTGGAGGAACTCATTGACCGGTTGGTGAAGGAGAACAAGGTCGTGGCCTTTATCAAGGGTTCGAGAAGTGCCCCATTGTGTGGTTTCTCGCAGAGGGTTGTTGGCATTCTTGAAAACCAAGGGGTGGATTATGAGAGTGTAGATGTGCTTGATGAAGAGTATAATTCTGGATTGAGGGAGACTCTGAAGAAGTATAGCAACTGGCCTACATTTCCACAGATATTTGTGAATGGAGAACTGCTTGGGGGTTGTGATATTCTAACCTCCATGCAAGAGAAGGGTGAGCTTGCCGGTGTGTTTAAAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glutaredoxin

Protein Analysis

296

Amino Acids

32.38

Weight (kDa)

7.7

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015118)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38270
fragaria_vesca	FvH4_6g11240
malus_domestica	MD00G1172400.v1.1
prunus_persica	Prupe.6G279600_v2.0.a1
pyrus_communis	pycom12g16270
rosa_chinensis	RchiOBHm_Chr3g0462751
rosa_laevigata	RLG00000024835
rosa_multiflora	Rmu_co8134540.1_g000001 Rmu_sc0000766.1_g000004
rosa_roxburghii	Rroxscaffold_6G00417230
rosa_rugosa	Rorug03G0059000
rosa_samantha	Rh3AG117000 Rh3BG120700 Rh3CG123700 Rh3DG122400
rosa_wichuraiana	Rw3G009910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	659, 703
AccI	GTMKAC	1 cut(s)	270
AccII	CGCG	2 cut(s)	162, 224
AciI	CCGC	5 cut(s)	46, 222, 224, 257, 329
AcoI	YGGCCR	1 cut(s)	3
AcuI	CTGAAG	2 cut(s)	284, 785
AfiI	CCNNNNNNNGG	2 cut(s)	659, 703
AgeI	ACCGGT	1 cut(s)	597
AgsI	TTSAA	1 cut(s)	692
AjnI	CCWGG	2 cut(s)	478, 503
AluBI	AGCT	7 cut(s)	19, 208, 298, 367, 461, 568, 865
AluI	AGCT	7 cut(s)	19, 208, 298, 367, 461, 568, 865
Alw26I	GTCTC	2 cut(s)	194, 752
AoxI	GGCC	3 cut(s)	3, 624, 782
ApeKI	GCWGC	1 cut(s)	565
AsiGI	ACCGGT	1 cut(s)	597
AspLEI	GCGC	1 cut(s)	164
AspS9I	GGNCC	3 cut(s)	211, 472, 508
AsuC2I	CCSGG	1 cut(s)	552
AsuHPI	GGTGA	5 cut(s)	106, 305, 338, 616, 872
AvaII	GGWCC	3 cut(s)	211, 472, 508
BaeGI	GKGCMC	2 cut(s)	222, 652
BaeI	ACNNNNGTAYC	2 cut(s)	252, 285
BalI	TGGCCA	1 cut(s)	5
BbvI	GCAGC	1 cut(s)	577
BccI	CCATC	1 cut(s)	436
BceAI	ACGGC	1 cut(s)	260
BciT130I	CCWGG	2 cut(s)	480, 505
BciVI	GTATCC	1 cut(s)	253
BcnI	CCSGG	1 cut(s)	552
BcoDI	GTCTC	2 cut(s)	194, 752
BfaI	CTAG	1 cut(s)	81
BfuI	GTATCC	1 cut(s)	253
BisI	GCNGC	2 cut(s)	330, 566
BlsI	GCNGC	2 cut(s)	331, 567
Bme1390I	CCNGG	3 cut(s)	480, 505, 552
Bme18I	GGWCC	3 cut(s)	211, 472, 508
BmgT120I	GGNCC	3 cut(s)	211, 472, 508
BmiI	GGNNCC	3 cut(s)	213, 474, 509
BmrFI	CCNGG	3 cut(s)	480, 505, 552
BmrI	ACTGGG	1 cut(s)	474
BmuI	ACTGGG	1 cut(s)	474
BplI	GAGNNNNNCTC	2 cut(s)	745, 777
BpmI	CTGGAG	1 cut(s)	462
BpuMI	CCSGG	1 cut(s)	552
BsaI	GGTCTC	1 cut(s)	194
BsaJI	CCNNGG	5 cut(s)	165, 222, 504, 521, 697
BsaWI	WCCGGW	3 cut(s)	263, 348, 597
Bsc4I	CCNNNNNNNGG	2 cut(s)	659, 703
Bse118I	RCCGGY	3 cut(s)	253, 597, 869
Bse1I	ACTGG	2 cut(s)	469, 785
Bse3DI	GCAATG	1 cut(s)	502
BseBI	CCWGG	2 cut(s)	480, 505
BseDI	CCNNGG	5 cut(s)	165, 222, 504, 521, 697
BseGI	GGATG	2 cut(s)	12, 447
BseLI	CCNNNNNNNGG	2 cut(s)	659, 703
BseMI	GCAATG	1 cut(s)	502
BseMII	CTCAG	1 cut(s)	210
BseNI	ACTGG	2 cut(s)	469, 785
BseSI	GKGCMC	2 cut(s)	222, 652
BseXI	GCAGC	1 cut(s)	577
BsgI	GTGCAG	1 cut(s)	584
Bsh1236I	CGCG	2 cut(s)	162, 224
Bsh1285I	CGRYCG	1 cut(s)	556
BshFI	GGCC	3 cut(s)	5, 626, 784
BshTI	ACCGGT	1 cut(s)	597
BsiEI	CGRYCG	1 cut(s)	556
BsiSI	CCGG	8 cut(s)	254, 264, 349, 362, 541, 552, 598, 870
BslFI	GGGAC	2 cut(s)	197, 458
BslI	CCNNNNNNNGG	2 cut(s)	659, 703
BsmAI	GTCTC	2 cut(s)	194, 752
BsmFI	GGGAC	2 cut(s)	197, 458
BsmI	GAATGC	1 cut(s)	684
BsnI	GGCC	3 cut(s)	5, 626, 784
Bso31I	GGTCTC	1 cut(s)	194
Bsp1286I	GDGCHC	2 cut(s)	222, 652
Bsp143I	GATC	1 cut(s)	535
BspACI	CCGC	5 cut(s)	46, 222, 224, 257, 329
BspANI	GGCC	3 cut(s)	5, 626, 784
BspCNI	CTCAG	1 cut(s)	209
BspFNI	CGCG	2 cut(s)	162, 224
BspLI	GGNNCC	3 cut(s)	213, 474, 509
BspTNI	GGTCTC	1 cut(s)	194
BsrDI	GCAATG	1 cut(s)	502
BsrFI	RCCGGY	3 cut(s)	253, 597, 869
BsrI	ACTGG	2 cut(s)	469, 785
BssAI	RCCGGY	3 cut(s)	253, 597, 869
BssECI	CCNNGG	5 cut(s)	165, 222, 504, 521, 697
BssMI	GATC	1 cut(s)	535
BssT1I	CCWWGG	2 cut(s)	165, 697
Bst2UI	CCWGG	2 cut(s)	480, 505
Bst4CI	ACNGT	2 cut(s)	293, 574
Bst6I	CTCTTC	2 cut(s)	61, 729
BstC8I	GCNNGC	3 cut(s)	222, 255, 867
BstDEI	CTNAG	1 cut(s)	196
BstDSI	CCRYGG	1 cut(s)	222
BstF5I	GGATG	2 cut(s)	12, 447
BstFNI	CGCG	2 cut(s)	162, 224
BstHHI	GCGC	1 cut(s)	164
BstKTI	GATC	1 cut(s)	538
BstMAI	GTCTC	2 cut(s)	194, 752
BstMBI	GATC	1 cut(s)	535
BstMCI	CGRYCG	1 cut(s)	556
BstMWI	GCNNNNNNNGC	1 cut(s)	574
BstNI	CCWGG	2 cut(s)	480, 505
BstSCI	CCNGG	3 cut(s)	478, 503, 550
BstSLI	GKGCMC	2 cut(s)	222, 652
BstUI	CGCG	2 cut(s)	162, 224
BstV1I	GCAGC	1 cut(s)	577
BsuI	GTATCC	1 cut(s)	253
BsuRI	GGCC	3 cut(s)	5, 626, 784
BtgI	CCRYGG	1 cut(s)	222
BtsCI	GGATG	2 cut(s)	12, 447
BtsIMutI	CAGTG	1 cut(s)	579
Cac8I	GCNNGC	3 cut(s)	222, 255, 867
CfoI	GCGC	1 cut(s)	164
Cfr10I	RCCGGY	3 cut(s)	253, 597, 869
Cfr13I	GGNCC	3 cut(s)	211, 472, 508
Cfr42I	CCGCGG	1 cut(s)	225
CspAI	ACCGGT	1 cut(s)	597
CviAII	CATG	3 cut(s)	438, 560, 847
DdeI	CTNAG	1 cut(s)	196
DpnI	GATC	1 cut(s)	537
DpnII	GATC	1 cut(s)	535
DraI	TTTAAA	1 cut(s)	880
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	61, 729
EarI	CTCTTC	2 cut(s)	61, 729
EciI	GGCGGA	1 cut(s)	272
Eco130I	CCWWGG	2 cut(s)	165, 697
Eco31I	GGTCTC	1 cut(s)	194
Eco47I	GGWCC	3 cut(s)	211, 472, 508
Eco57I	CTGAAG	2 cut(s)	284, 785
EcoO109I	RGGNCCY	1 cut(s)	472
EcoRII	CCWGG	2 cut(s)	478, 503
EcoT14I	CCWWGG	2 cut(s)	165, 697
ErhI	CCWWGG	2 cut(s)	165, 697
FaeI	CATG	3 cut(s)	441, 563, 850
FaiI	YATR	9 cut(s)	50, 326, 370, 439, 561, 711, 741, 774, 848
FaqI	GGGAC	2 cut(s)	197, 458
FatI	CATG	3 cut(s)	437, 559, 846
FauI	CCCGC	1 cut(s)	229
FblI	GTMKAC	1 cut(s)	270
Fnu4HI	GCNGC	2 cut(s)	330, 566
FokI	GGATG	1 cut(s)	454
Fsp4HI	GCNGC	2 cut(s)	330, 566
FspBI	CTAG	1 cut(s)	81
GlaI	GCGC	1 cut(s)	163
GluI	GCNGC	2 cut(s)	330, 566
GsuI	CTGGAG	1 cut(s)	462
HaeIII	GGCC	3 cut(s)	5, 626, 784
HapII	CCGG	8 cut(s)	254, 264, 349, 362, 541, 552, 598, 870
HhaI	GCGC	1 cut(s)	164
Hin1II	CATG	3 cut(s)	441, 563, 850
Hin6I	GCGC	1 cut(s)	162
HinP1I	GCGC	1 cut(s)	162
HinfI	GANTC	3 cut(s)	267, 488, 760
HpaII	CCGG	8 cut(s)	254, 264, 349, 362, 541, 552, 598, 870
HphI	GGTGA	5 cut(s)	106, 305, 338, 616, 872
Hpy166II	GTNNAC	1 cut(s)	271
Hpy188I	TCNGA	3 cut(s)	199, 512, 765
Hpy188III	TCNNGA	3 cut(s)	642, 689, 747
Hpy8I	GTNNAC	1 cut(s)	271
HpyAV	CCTTC	3 cut(s)	463, 601, 850
HpyCH4III	ACNGT	2 cut(s)	293, 574
HpyCH4V	TGCA	2 cut(s)	565, 850
HpyF10VI	GCNNNNNNNGC	1 cut(s)	574
HpyF3I	CTNAG	1 cut(s)	196
Hsp92II	CATG	3 cut(s)	441, 563, 850
HspAI	GCGC	1 cut(s)	162
KroI	GCCGGC	1 cut(s)	253
KroNI	GCCGGC	1 cut(s)	255
KspI	CCGCGG	1 cut(s)	225
Kzo9I	GATC	1 cut(s)	535
LmnI	GCTCC	1 cut(s)	364
Lsp1109I	GCAGC	1 cut(s)	577
MaeI	CTAG	1 cut(s)	81
MaeIII	GTNAC	1 cut(s)	172
MalI	GATC	1 cut(s)	537
MboI	GATC	1 cut(s)	535
MboII	GAAGA	6 cut(s)	48, 57, 458, 538, 746, 778
MhlI	GDGCHC	2 cut(s)	222, 652
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	27, 248, 742
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	2 cut(s)	276, 754
MmeI	TCCRAC	1 cut(s)	535
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	253
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	186, 456, 879
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	224, 568
MspI	CCGG	8 cut(s)	254, 264, 349, 362, 541, 552, 598, 870
MspR9I	CCNGG	3 cut(s)	480, 505, 552
Mva1269I	GAATGC	1 cut(s)	684
MvaI	CCWGG	2 cut(s)	480, 505
MvnI	CGCG	2 cut(s)	162, 224
MwoI	GCNNNNNNNGC	1 cut(s)	574
NaeI	GCCGGC	1 cut(s)	255
NciI	CCSGG	1 cut(s)	552
NdeII	GATC	1 cut(s)	535
NgoMIV	GCCGGC	1 cut(s)	253
NlaIII	CATG	3 cut(s)	441, 563, 850
NlaIV	GGNNCC	3 cut(s)	213, 474, 509
NmuCI	GTSAC	1 cut(s)	172
PcsI	WCGNNNNNNNCGW	1 cut(s)	279
PctI	GAATGC	1 cut(s)	684
PdiI	GCCGGC	1 cut(s)	255
PfeI	GAWTC	1 cut(s)	488
PflMI	CCANNNNNTGG	2 cut(s)	659, 703
PinAI	ACCGGT	1 cut(s)	597
PkrI	GCNGC	2 cut(s)	331, 567
PleI	GAGTC	2 cut(s)	275, 754
PpsI	GAGTC	2 cut(s)	275, 754
PpuMI	RGGWCCY	1 cut(s)	472
Psp5II	RGGWCCY	1 cut(s)	472
Psp6I	CCWGG	2 cut(s)	478, 503
PspGI	CCWGG	2 cut(s)	478, 503
PspN4I	GGNNCC	3 cut(s)	213, 474, 509
PspPI	GGNCC	3 cut(s)	211, 472, 508
PspPPI	RGGWCCY	1 cut(s)	472
PvuII	CAGCTG	1 cut(s)	568
SacII	CCGCGG	1 cut(s)	225
SaqAI	TTAA	3 cut(s)	186, 456, 879
SatI	GCNGC	2 cut(s)	330, 566
Sau3AI	GATC	1 cut(s)	535
Sau96I	GGNCC	3 cut(s)	211, 472, 508
SchI	GAGTC	2 cut(s)	276, 754
ScrFI	CCNGG	3 cut(s)	480, 505, 552
SduI	GDGCHC	2 cut(s)	222, 652
Sfr303I	CCGCGG	1 cut(s)	225
SgrBI	CCGCGG	1 cut(s)	225
SinI	GGWCC	3 cut(s)	211, 472, 508
Sse9I	AATT	3 cut(s)	27, 248, 742
SsiI	CCGC	5 cut(s)	46, 222, 224, 257, 329
SspMI	CTAG	1 cut(s)	81
StyD4I	CCNGG	3 cut(s)	478, 503, 550
StyI	CCWWGG	2 cut(s)	165, 697
TaaI	ACNGT	2 cut(s)	293, 574
TaqI	TCGA	3 cut(s)	282, 317, 641
TaqII	GACCGA	1 cut(s)	218
TasI	AATT	3 cut(s)	27, 248, 742
TauI	GCSGC	1 cut(s)	332
TfiI	GAWTC	1 cut(s)	488
Tru1I	TTAA	3 cut(s)	186, 456, 879
Tru9I	TTAA	3 cut(s)	186, 456, 879
TscAI	CASTG	1 cut(s)	579
TseFI	GTSAC	1 cut(s)	172
TseI	GCWGC	1 cut(s)	565
Tsp45I	GTSAC	1 cut(s)	172
TspDTI	ATGAA	4 cut(s)	249, 414, 501, 747
TspGWI	ACGGA	1 cut(s)	367
TspRI	CASTG	1 cut(s)	579
Van91I	CCANNNNNTGG	2 cut(s)	659, 703
VpaK11BI	GGWCC	3 cut(s)	211, 472, 508
XmiI	GTMKAC	1 cut(s)	270
XspI	CTAG	1 cut(s)	81

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.