D-ala D-ala ligase N-terminus
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 AT3G08840 |
| fragaria_vesca | FvH4_6g10330 |
| malus_domestica | MD04G1168900.v1.1 MD12G1182400.v1.1 |
| prunus_persica | Prupe.6G287100_v2.0.a1 |
| pyrus_communis | pycom04g14970 pycom12g17150 |
| rosa_chinensis | RchiOBHm_Chr3g0461101 |
| rosa_laevigata | RLG00000024952 |
| rosa_multiflora | Rmu_sc0001521.1_g000056 |
| rosa_roxburghii | Rroxscaffold_6G00418850 |
| rosa_rugosa | Rorug03G0048200 Rorug03G0048300 |
| rosa_samantha | Rh3AG105700 Rh3BG109700 Rh3CG111400 Rh3DG111400 |
| rosa_wichuraiana | Rw3G009050 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 2231 |
| Acc36I | ACCTGC | 1 cut(s) | 1051 |
| AccB1I | GGYRCC | 1 cut(s) | 2719 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 581 |
| AccBSI | CCGCTC | 1 cut(s) | 65 |
| AccI | GTMKAC | 1 cut(s) | 396 |
| AccII | CGCG | 3 cut(s) | 86, 145, 171 |
| AccIII | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| AciI | CCGC | 7 cut(s) | 63, 74, 145, 269, 413, 1375, 1536 |
| AclWI | GGATC | 6 cut(s) | 598, 790, 940, 1874, 2103, 2470 |
| AcsI | RAATTY | 5 cut(s) | 279, 524, 570, 1223, 2531 |
| AcuI | CTGAAG | 4 cut(s) | 79, 1925, 1980, 2132 |
| AcyI | GRCGYC | 1 cut(s) | 2732 |
| AfaI | GTAC | 7 cut(s) | 623, 666, 1246, 1911, 2107, 2783, 2803 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 391, 581, 749, 832, 1610, 1976, 2326 |
| AflIII | ACRYGT | 1 cut(s) | 334 |
| AjnI | CCWGG | 5 cut(s) | 480, 813, 1805, 1981, 2722 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1531, 1563, 2424, 2456 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 972, 1004 |
| Alw21I | GWGCWC | 2 cut(s) | 642, 2334 |
| Alw26I | GTCTC | 1 cut(s) | 1510 |
| AlwI | GGATC | 6 cut(s) | 598, 790, 940, 1874, 2103, 2470 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1982, 2761 |
| Aor13HI | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| AoxI | GGCC | 3 cut(s) | 811, 1147, 2592 |
| ApeKI | GCWGC | 4 cut(s) | 5, 21, 485, 2214 |
| ApoI | RAATTY | 5 cut(s) | 279, 524, 570, 1223, 2531 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 1282, 1314, 2270, 2302 |
| AsiSI | GCGATCGC | 1 cut(s) | 12 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 75, 862, 885, 1110, 1455, 1584, 1965 |
| AspLEI | GCGC | 5 cut(s) | 86, 88, 145, 173, 2219 |
| AspS9I | GGNCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| AsuC2I | CCSGG | 2 cut(s) | 2327, 2498 |
| AsuHPI | GGTGA | 5 cut(s) | 338, 542, 1937, 2519, 2780 |
| AsuNHI | GCTAGC | 1 cut(s) | 1873 |
| AvaII | GGWCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2765, 2798 |
| BanI | GGYRCC | 1 cut(s) | 2719 |
| BanII | GRGCYC | 2 cut(s) | 642, 2334 |
| BauI | CACGAG | 1 cut(s) | 774 |
| BbsI | GAAGAC | 2 cut(s) | 2229, 2259 |
| Bbv12I | GWGCWC | 2 cut(s) | 642, 2334 |
| BbvI | GCAGC | 4 cut(s) | 8, 17, 472, 2201 |
| BciT130I | CCWGG | 5 cut(s) | 482, 815, 1807, 1983, 2724 |
| BciVI | GTATCC | 1 cut(s) | 1389 |
| BclI | TGATCA | 2 cut(s) | 310, 2700 |
| BcnI | CCSGG | 2 cut(s) | 2327, 2498 |
| BcoDI | GTCTC | 1 cut(s) | 1510 |
| BfaI | CTAG | 5 cut(s) | 875, 1422, 1874, 2379, 2484 |
| BfmI | CTRYAG | 1 cut(s) | 1893 |
| BfuAI | ACCTGC | 1 cut(s) | 1051 |
| BfuI | GTATCC | 1 cut(s) | 1389 |
| BglII | AGATCT | 1 cut(s) | 2400 |
| BisI | GCNGC | 5 cut(s) | 6, 22, 63, 486, 2215 |
| BlpI | GCTNAGC | 1 cut(s) | 641 |
| BlsI | GCNGC | 5 cut(s) | 7, 23, 64, 487, 2216 |
| Bme1390I | CCNGG | 7 cut(s) | 482, 815, 1807, 1983, 2327, 2498, 2724 |
| Bme18I | GGWCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| BmgT120I | GGNCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| BmiI | GGNNCC | 8 cut(s) | 72, 164, 165, 262, 741, 2302, 2721, 2772 |
| BmrFI | CCNGG | 7 cut(s) | 482, 815, 1807, 1983, 2327, 2498, 2724 |
| BmrI | ACTGGG | 1 cut(s) | 2205 |
| BmtI | GCTAGC | 1 cut(s) | 1877 |
| BmuI | ACTGGG | 1 cut(s) | 2205 |
| BpiI | GAAGAC | 2 cut(s) | 2229, 2259 |
| BpmI | CTGGAG | 3 cut(s) | 10, 1632, 2004 |
| Bpu10I | CCTNAGC | 3 cut(s) | 390, 827, 1887 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 641 |
| BpuEI | CTTGAG | 2 cut(s) | 142, 2543 |
| BpuMI | CCSGG | 2 cut(s) | 2327, 2498 |
| BsaBI | GATNNNNATC | 1 cut(s) | 948 |
| BsaHI | GRCGYC | 1 cut(s) | 2732 |
| BsaJI | CCNNGG | 6 cut(s) | 177, 264, 445, 991, 1878, 2325 |
| BsaWI | WCCGGW | 4 cut(s) | 67, 1035, 1347, 2265 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2551, 2581 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 391, 581, 749, 832, 1610, 1976, 2326 |
| Bse118I | RCCGGY | 1 cut(s) | 139 |
| Bse1I | ACTGG | 7 cut(s) | 509, 741, 1615, 2200, 2551, 2766, 2791 |
| Bse8I | GATNNNNATC | 1 cut(s) | 948 |
| BseAI | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| BseBI | CCWGG | 5 cut(s) | 482, 815, 1807, 1983, 2724 |
| BseDI | CCNNGG | 6 cut(s) | 177, 264, 445, 991, 1878, 2325 |
| BseGI | GGATG | 5 cut(s) | 949, 1024, 1181, 1287, 2192 |
| BseJI | GATNNNNATC | 1 cut(s) | 948 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 391, 581, 749, 832, 1610, 1976, 2326 |
| BseMII | CTCAG | 6 cut(s) | 227, 306, 404, 655, 1227, 1901 |
| BseNI | ACTGG | 7 cut(s) | 509, 741, 1615, 2200, 2551, 2766, 2791 |
| BsePI | GCGCGC | 1 cut(s) | 84 |
| BseRI | GAGGAG | 4 cut(s) | 166, 1515, 2098, 2540 |
| BseXI | GCAGC | 4 cut(s) | 8, 17, 472, 2201 |
| Bsh1236I | CGCG | 3 cut(s) | 86, 145, 171 |
| Bsh1285I | CGRYCG | 2 cut(s) | 12, 196 |
| BshFI | GGCC | 3 cut(s) | 813, 1149, 2594 |
| BshNI | GGYRCC | 1 cut(s) | 2719 |
| BsiEI | CGRYCG | 2 cut(s) | 12, 196 |
| BsiHKAI | GWGCWC | 2 cut(s) | 642, 2334 |
| BsiSI | CCGG | 7 cut(s) | 68, 140, 1036, 1348, 2266, 2327, 2497 |
| BslFI | GGGAC | 3 cut(s) | 149, 246, 2557 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 391, 581, 749, 832, 1610, 1976, 2326 |
| BsmAI | GTCTC | 1 cut(s) | 1510 |
| BsmFI | GGGAC | 3 cut(s) | 149, 246, 2557 |
| BsmI | GAATGC | 2 cut(s) | 543, 611 |
| BsnI | GGCC | 3 cut(s) | 813, 1149, 2594 |
| Bsp1286I | GDGCHC | 2 cut(s) | 642, 2334 |
| Bsp13I | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 641 |
| Bsp19I | CCATGG | 1 cut(s) | 991 |
| BspACI | CCGC | 7 cut(s) | 63, 74, 145, 269, 413, 1375, 1536 |
| BspANI | GGCC | 3 cut(s) | 813, 1149, 2594 |
| BspCNI | CTCAG | 6 cut(s) | 228, 305, 403, 654, 1228, 1900 |
| BspEI | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| BspFNI | CGCG | 3 cut(s) | 86, 145, 171 |
| BspLI | GGNNCC | 8 cut(s) | 72, 164, 165, 262, 741, 2302, 2721, 2772 |
| BspMI | ACCTGC | 1 cut(s) | 1051 |
| BspOI | GCTAGC | 1 cut(s) | 1877 |
| BspPI | GGATC | 6 cut(s) | 598, 790, 940, 1874, 2103, 2470 |
| BspT107I | GGYRCC | 1 cut(s) | 2719 |
| BsrBI | CCGCTC | 1 cut(s) | 65 |
| BsrFI | RCCGGY | 1 cut(s) | 139 |
| BsrI | ACTGG | 7 cut(s) | 509, 741, 1615, 2200, 2551, 2766, 2791 |
| BssAI | RCCGGY | 1 cut(s) | 139 |
| BssECI | CCNNGG | 6 cut(s) | 177, 264, 445, 991, 1878, 2325 |
| BssHII | GCGCGC | 1 cut(s) | 84 |
| BssNAI | GTATAC | 1 cut(s) | 397 |
| BssNI | GRCGYC | 1 cut(s) | 2732 |
| BssSI | CACGAG | 1 cut(s) | 774 |
| BssT1I | CCWWGG | 3 cut(s) | 445, 991, 1878 |
| Bst1107I | GTATAC | 1 cut(s) | 397 |
| Bst2BI | CACGAG | 1 cut(s) | 774 |
| Bst2UI | CCWGG | 5 cut(s) | 482, 815, 1807, 1983, 2724 |
| Bst6I | CTCTTC | 1 cut(s) | 207 |
| BstACI | GRCGYC | 1 cut(s) | 2732 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 440 |
| BstC8I | GCNNGC | 8 cut(s) | 86, 141, 436, 1311, 1563, 1599, 1711, 1875 |
| BstDEI | CTNAG | 9 cut(s) | 236, 292, 390, 641, 827, 1236, 1679, 1887, 2102 |
| BstDSI | CCRYGG | 2 cut(s) | 177, 991 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 747, 830 |
| BstF5I | GGATG | 5 cut(s) | 949, 1024, 1181, 1287, 2192 |
| BstFNI | CGCG | 3 cut(s) | 86, 145, 171 |
| BstHHI | GCGC | 5 cut(s) | 86, 88, 145, 173, 2219 |
| BstMAI | GTCTC | 1 cut(s) | 1510 |
| BstMCI | CGRYCG | 2 cut(s) | 12, 196 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 11, 27, 112, 140, 440, 1558, 1883 |
| BstNI | CCWGG | 5 cut(s) | 482, 815, 1807, 1983, 2724 |
| BstNSI | RCATGY | 2 cut(s) | 338, 1713 |
| BstSCI | CCNGG | 7 cut(s) | 480, 813, 1805, 1981, 2325, 2496, 2722 |
| BstSFI | CTRYAG | 1 cut(s) | 1893 |
| BstUI | CGCG | 3 cut(s) | 86, 145, 171 |
| BstV1I | GCAGC | 4 cut(s) | 8, 17, 472, 2201 |
| BstV2I | GAAGAC | 2 cut(s) | 2229, 2259 |
| BstX2I | RGATCY | 3 cut(s) | 932, 2095, 2400 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1145 |
| BstYI | RGATCY | 3 cut(s) | 932, 2095, 2400 |
| BstZ17I | GTATAC | 1 cut(s) | 397 |
| BsuI | GTATCC | 1 cut(s) | 1389 |
| BsuRI | GGCC | 3 cut(s) | 813, 1149, 2594 |
| BtgI | CCRYGG | 2 cut(s) | 177, 991 |
| BtsCI | GGATG | 5 cut(s) | 949, 1024, 1181, 1287, 2192 |
| BtsI | GCAGTG | 4 cut(s) | 1003, 1408, 1439, 2804 |
| BtsIMutI | CAGTG | 9 cut(s) | 1003, 1408, 1439, 1868, 2156, 2490, 2739, 2759, 2804 |
| BveI | ACCTGC | 1 cut(s) | 1051 |
| Cac8I | GCNNGC | 8 cut(s) | 86, 141, 436, 1311, 1563, 1599, 1711, 1875 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1982, 2761 |
| CfoI | GCGC | 5 cut(s) | 86, 88, 145, 173, 2219 |
| Cfr10I | RCCGGY | 1 cut(s) | 139 |
| Cfr13I | GGNCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| CseI | GACGC | 1 cut(s) | 2740 |
| Csp6I | GTAC | 7 cut(s) | 622, 665, 1245, 1910, 2106, 2782, 2802 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 957, 992 |
| CviQI | GTAC | 7 cut(s) | 622, 665, 1245, 1910, 2106, 2782, 2802 |
| DdeI | CTNAG | 9 cut(s) | 236, 292, 390, 641, 827, 1236, 1679, 1887, 2102 |
| DraI | TTTAAA | 2 cut(s) | 427, 1845 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2231 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2231 |
| Eam1104I | CTCTTC | 1 cut(s) | 207 |
| EarI | CTCTTC | 1 cut(s) | 207 |
| EciI | GGCGGA | 1 cut(s) | 284 |
| Ecl136II | GAGCTC | 2 cut(s) | 640, 2332 |
| Eco130I | CCWWGG | 3 cut(s) | 445, 991, 1878 |
| Eco147I | AGGCCT | 1 cut(s) | 2594 |
| Eco24I | GRGCYC | 2 cut(s) | 642, 2334 |
| Eco47I | GGWCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| Eco53kI | GAGCTC | 2 cut(s) | 640, 2332 |
| Eco57I | CTGAAG | 4 cut(s) | 79, 1925, 1980, 2132 |
| EcoICRI | GAGCTC | 2 cut(s) | 640, 2332 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 747, 830 |
| EcoO109I | RGGNCCY | 3 cut(s) | 163, 260, 1979 |
| EcoRII | CCWGG | 5 cut(s) | 480, 813, 1805, 1981, 2722 |
| EcoT14I | CCWWGG | 3 cut(s) | 445, 991, 1878 |
| EcoT22I | ATGCAT | 2 cut(s) | 1711, 2671 |
| EcoT38I | GRGCYC | 2 cut(s) | 642, 2334 |
| ErhI | CCWWGG | 3 cut(s) | 445, 991, 1878 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 104, 136, 118, 150, 1512, 1544 |
| FaqI | GGGAC | 3 cut(s) | 149, 246, 2557 |
| FauNDI | CATATG | 2 cut(s) | 808, 2834 |
| FbaI | TGATCA | 2 cut(s) | 310, 2700 |
| FblI | GTMKAC | 1 cut(s) | 396 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 22, 63, 486, 2215 |
| FokI | GGATG | 5 cut(s) | 936, 1031, 1188, 1294, 2199 |
| FriOI | GRGCYC | 2 cut(s) | 642, 2334 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 22, 63, 486, 2215 |
| FspBI | CTAG | 5 cut(s) | 875, 1422, 1874, 2379, 2484 |
| GlaI | GCGC | 5 cut(s) | 85, 87, 144, 172, 2218 |
| GluI | GCNGC | 5 cut(s) | 6, 22, 63, 486, 2215 |
| GsuI | CTGGAG | 3 cut(s) | 10, 1632, 2004 |
| HaeIII | GGCC | 3 cut(s) | 813, 1149, 2594 |
| HapII | CCGG | 7 cut(s) | 68, 140, 1036, 1348, 2266, 2327, 2497 |
| HgaI | GACGC | 1 cut(s) | 2740 |
| HhaI | GCGC | 5 cut(s) | 86, 88, 145, 173, 2219 |
| Hin1I | GRCGYC | 1 cut(s) | 2732 |
| Hin6I | GCGC | 5 cut(s) | 84, 86, 143, 171, 2217 |
| HinP1I | GCGC | 5 cut(s) | 84, 86, 143, 171, 2217 |
| HindIII | AAGCTT | 3 cut(s) | 1142, 1563, 2144 |
| HpaII | CCGG | 7 cut(s) | 68, 140, 1036, 1348, 2266, 2327, 2497 |
| HphI | GGTGA | 5 cut(s) | 338, 542, 1937, 2519, 2780 |
| Hpy166II | GTNNAC | 8 cut(s) | 190, 397, 496, 909, 1812, 2108, 2414, 2804 |
| Hpy8I | GTNNAC | 8 cut(s) | 190, 397, 496, 909, 1812, 2108, 2414, 2804 |
| Hpy99I | CGWCG | 1 cut(s) | 2616 |
| HpyAV | CCTTC | 9 cut(s) | 887, 1009, 1058, 1112, 1224, 1312, 1781, 1955, 2745 |
| HpyCH4IV | ACGT | 1 cut(s) | 2614 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 11, 27, 112, 140, 440, 1558, 1883 |
| HpyF3I | CTNAG | 9 cut(s) | 236, 292, 390, 641, 827, 1236, 1679, 1887, 2102 |
| HpySE526I | ACGT | 1 cut(s) | 2614 |
| Hsp92I | GRCGYC | 1 cut(s) | 2732 |
| HspAI | GCGC | 5 cut(s) | 84, 86, 143, 171, 2217 |
| KflI | GGGWCCC | 1 cut(s) | 163 |
| Kpn2I | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| KroI | GCCGGC | 1 cut(s) | 139 |
| KroNI | GCCGGC | 1 cut(s) | 141 |
| Ksp22I | TGATCA | 2 cut(s) | 310, 2700 |
| LmnI | GCTCC | 9 cut(s) | 29, 70, 153, 271, 637, 1121, 1285, 1350, 2329 |
| Lsp1109I | GCAGC | 4 cut(s) | 8, 17, 472, 2201 |
| MaeI | CTAG | 5 cut(s) | 875, 1422, 1874, 2379, 2484 |
| MaeII | ACGT | 1 cut(s) | 2614 |
| MaeIII | GTNAC | 5 cut(s) | 796, 1006, 1154, 1201, 2507 |
| MbiI | CCGCTC | 1 cut(s) | 65 |
| MboII | GAAGA | 7 cut(s) | 224, 545, 1437, 1807, 1940, 2234, 2264 |
| MflI | RGATCY | 3 cut(s) | 932, 2095, 2400 |
| MhlI | GDGCHC | 2 cut(s) | 642, 2334 |
| MlyI | GAGTC | 3 cut(s) | 464, 879, 2488 |
| MmeI | TCCRAC | 3 cut(s) | 1076, 1932, 2028 |
| Mph1103I | ATGCAT | 2 cut(s) | 1711, 2671 |
| MreI | CGCCGGCG | 1 cut(s) | 139 |
| MroI | TCCGGA | 3 cut(s) | 67, 1347, 2265 |
| MroNI | GCCGGC | 1 cut(s) | 139 |
| MroXI | GAANNNNTTC | 7 cut(s) | 75, 862, 885, 1110, 1455, 1584, 1965 |
| MslI | CAYNNNNRTG | 3 cut(s) | 996, 1368, 2309 |
| MspA1I | CMGCKG | 1 cut(s) | 1536 |
| MspI | CCGG | 7 cut(s) | 68, 140, 1036, 1348, 2266, 2327, 2497 |
| MspR9I | CCNGG | 7 cut(s) | 482, 815, 1807, 1983, 2327, 2498, 2724 |
| Mva1269I | GAATGC | 2 cut(s) | 543, 611 |
| MvaI | CCWGG | 5 cut(s) | 482, 815, 1807, 1983, 2724 |
| MvnI | CGCG | 3 cut(s) | 86, 145, 171 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 11, 27, 112, 140, 440, 1558, 1883 |
| NaeI | GCCGGC | 1 cut(s) | 141 |
| NciI | CCSGG | 2 cut(s) | 2327, 2498 |
| NcoI | CCATGG | 1 cut(s) | 991 |
| NdeI | CATATG | 2 cut(s) | 808, 2834 |
| NgoMIV | GCCGGC | 1 cut(s) | 139 |
| NheI | GCTAGC | 1 cut(s) | 1873 |
| NlaIV | GGNNCC | 8 cut(s) | 72, 164, 165, 262, 741, 2302, 2721, 2772 |
| NmeAIII | GCCGAG | 1 cut(s) | 245 |
| NmuCI | GTSAC | 2 cut(s) | 1154, 2507 |
| NsiI | ATGCAT | 2 cut(s) | 1711, 2671 |
| NspI | RCATGY | 2 cut(s) | 338, 1713 |
| PaeI | GCATGC | 1 cut(s) | 1713 |
| PauI | GCGCGC | 1 cut(s) | 84 |
| PceI | AGGCCT | 1 cut(s) | 2594 |
| PciI | ACATGT | 1 cut(s) | 334 |
| PctI | GAATGC | 2 cut(s) | 543, 611 |
| PdiI | GCCGGC | 1 cut(s) | 141 |
| PdmI | GAANNNNTTC | 7 cut(s) | 75, 862, 885, 1110, 1455, 1584, 1965 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 581 |
| PfoI | TCCNGGA | 2 cut(s) | 1981, 2496 |
| PkrI | GCNGC | 5 cut(s) | 7, 23, 64, 487, 2216 |
| Ple19I | CGATCG | 2 cut(s) | 12, 196 |
| PleI | GAGTC | 3 cut(s) | 463, 878, 2487 |
| PpsI | GAGTC | 3 cut(s) | 463, 878, 2487 |
| PpuMI | RGGWCCY | 3 cut(s) | 163, 260, 1979 |
| PscI | ACATGT | 1 cut(s) | 334 |
| Psp124BI | GAGCTC | 2 cut(s) | 642, 2334 |
| Psp5II | RGGWCCY | 3 cut(s) | 163, 260, 1979 |
| Psp6I | CCWGG | 5 cut(s) | 480, 813, 1805, 1981, 2722 |
| PspGI | CCWGG | 5 cut(s) | 480, 813, 1805, 1981, 2722 |
| PspN4I | GGNNCC | 8 cut(s) | 72, 164, 165, 262, 741, 2302, 2721, 2772 |
| PspPI | GGNCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| PspPPI | RGGWCCY | 3 cut(s) | 163, 260, 1979 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1982, 2761 |
| PsuI | RGATCY | 3 cut(s) | 932, 2095, 2400 |
| PteI | GCGCGC | 1 cut(s) | 84 |
| PvuI | CGATCG | 2 cut(s) | 12, 196 |
| RgaI | GCGATCGC | 1 cut(s) | 12 |
| RsaI | GTAC | 7 cut(s) | 623, 666, 1246, 1911, 2107, 2783, 2803 |
| RsaNI | GTAC | 7 cut(s) | 622, 665, 1245, 1910, 2106, 2782, 2802 |
| RseI | CAYNNNNRTG | 3 cut(s) | 996, 1368, 2309 |
| SacI | GAGCTC | 2 cut(s) | 642, 2334 |
| SatI | GCNGC | 5 cut(s) | 6, 22, 63, 486, 2215 |
| Sau96I | GGNCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| SchI | GAGTC | 3 cut(s) | 464, 879, 2488 |
| ScrFI | CCNGG | 7 cut(s) | 482, 815, 1807, 1983, 2327, 2498, 2724 |
| SduI | GDGCHC | 2 cut(s) | 642, 2334 |
| SfaAI | GCGATCGC | 1 cut(s) | 12 |
| SfcI | CTRYAG | 1 cut(s) | 1893 |
| SgfI | GCGATCGC | 1 cut(s) | 12 |
| SgrAI | CRCCGGYG | 1 cut(s) | 139 |
| SinI | GGWCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 996, 1368, 2309 |
| SmlI | CTYRAG | 2 cut(s) | 121, 2522 |
| SmoI | CTYRAG | 2 cut(s) | 121, 2522 |
| SphI | GCATGC | 1 cut(s) | 1713 |
| SseBI | AGGCCT | 1 cut(s) | 2594 |
| SsiI | CCGC | 7 cut(s) | 63, 74, 145, 269, 413, 1375, 1536 |
| SspI | AATATT | 2 cut(s) | 1251, 1342 |
| SspMI | CTAG | 5 cut(s) | 875, 1422, 1874, 2379, 2484 |
| SstI | GAGCTC | 2 cut(s) | 642, 2334 |
| StuI | AGGCCT | 1 cut(s) | 2594 |
| StyD4I | CCNGG | 7 cut(s) | 480, 813, 1805, 1981, 2325, 2496, 2722 |
| StyI | CCWWGG | 3 cut(s) | 445, 991, 1878 |
| TaiI | ACGT | 1 cut(s) | 2617 |
| TaqI | TCGA | 8 cut(s) | 196, 298, 453, 615, 1114, 1165, 1316, 1578 |
| TaqII | GACCGA | 1 cut(s) | 1749 |
| TatI | WGTACW | 3 cut(s) | 621, 1909, 2105 |
| TauI | GCSGC | 1 cut(s) | 65 |
| TscAI | CASTG | 9 cut(s) | 1003, 1408, 1446, 1868, 2156, 2497, 2746, 2766, 2811 |
| TseFI | GTSAC | 2 cut(s) | 1154, 2507 |
| TseI | GCWGC | 4 cut(s) | 5, 21, 485, 2214 |
| Tsp45I | GTSAC | 2 cut(s) | 1154, 2507 |
| TspGWI | ACGGA | 4 cut(s) | 166, 1025, 1142, 2789 |
| TspRI | CASTG | 9 cut(s) | 1003, 1408, 1446, 1868, 2156, 2497, 2746, 2766, 2811 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 581 |
| VpaK11BI | GGWCC | 5 cut(s) | 163, 260, 739, 1979, 2829 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 747, 830 |
| XapI | RAATTY | 5 cut(s) | 279, 524, 570, 1223, 2531 |
| XbaI | TCTAGA | 1 cut(s) | 2378 |
| XceI | RCATGY | 2 cut(s) | 338, 1713 |
| XmiI | GTMKAC | 1 cut(s) | 396 |
| XmnI | GAANNNNTTC | 7 cut(s) | 75, 862, 885, 1110, 1455, 1584, 1965 |
| XspI | CTAG | 5 cut(s) | 875, 1422, 1874, 2379, 2484 |
| Zsp2I | ATGCAT | 2 cut(s) | 1711, 2671 |