Prupe.6G297900_v2.0.a1

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0014156
Physical Location & Seq
Reverse (-)
27193316 .. 27196199
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G297900.1

Sequence Viewer

Length: 936 bp
ATGGGGCTTCTATTTCGAAGTCTCGCGATGCTTTTCGTTGTGATATGGTTCTCACGGCTGCCTGATCTTTCTGCACAATCTTCAAGAGGCCAACCGCGTGCTCTTGATGCTCTTCTTCAAGATTATGCTTACAGGGCTTTTGTTCATCCAAAGACAGGTGTTACCTTTAAGGGTATGGTTCCCTTGAATTTGACTGGAATTCAGATTGCAGCTATGAGGCTCAGGAGTGGTAGCTTGTACAGGAGAGGTGTTGCGATGTACAAAGAGTTTGAGATCCCCCAGTATGTCAGTGAGAAACCATATGTGGAGAGGCTTGTTTTGGTGTACCAAAACTTAGGCAATTGGTCGATGGTGTATTACCCATTACCTGGTTACTCTTACTTAGCTCCAGTGCTCGGTCTTCTTGCTTATAATGCTAGCAACTTATCAGCCACAAATTTGCCAGAATTGGATATCAGGGCATCTGGTGATCCCATAAAAATCAAATTTCAGGATGTGAAACCGACCCCTGCAGGGACCGTGGCAAAGTGCGTTTCGTTTGATTTGGATGGTTCAGTCAATTTCAGCAATGTGGCATCAGGCAATATATGCTCAACAATCCAACAGGGGCACTTCTCTATAGCAGTCGAGTCCATTGCTCCTTCTCCAGCACCAGTTTCTCCTAGTCCTACCCCTGCTGGTGCCGGAAAGAAGAATAATAATTCTAAAGTGTGGATAATTGTTGGGTCTGTGCTGGGTGGATTAGCATTGCTGGCATTGTTGTTCTTCCTAGTACTTTGGGCGTATAAGTACAGGGAAAAGAAGAGTTTGCAACAGATGGAGAAGGCTGCAGATGTAGGAGAAGCCTTGCATATGACCTCAGTTGGAGATACAAAAGCACCTGCAGCAACATTTACTCGAACACAACCGACCATCGAGAGTGAATATGTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

312

Amino Acids

33.92

Weight (kDa)

9.34

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G08600
fragaria_vesca FvH4_3g04260 FvH4_6g09410
malus_domestica MD04G1178000.v1.1 MD12G1193600.v1.1
prunus_persica Prupe.6G297900_v2.0.a1
pyrus_communis pycom04g15700 pycom12g17980
rosa_chinensis RchiOBHm_Chr3g0459851
rosa_laevigata RLG00000025056
rosa_multiflora Rmu_sc0000240.1_g000040
rosa_roxburghii Rroxscaffold_6G00419960
rosa_rugosa Rorug03G0038100
rosa_samantha Rh3AG097000 Rh3BG099800 Rh3CG101600 Rh3DG101200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 411
AarI CACCTGC 1 cut(s) 889
Acc36I ACCTGC 1 cut(s) 889
AccB1I GGYRCC 1 cut(s) 680
AccB7I CCANNNNNTGG 1 cut(s) 368
AccII CGCG 2 cut(s) 26, 97
AciI CCGC 1 cut(s) 95
AclWI GGATC 2 cut(s) 268, 464
AcsI RAATTY 4 cut(s) 187, 198, 436, 485
AfaI GTAC 5 cut(s) 239, 260, 326, 774, 791
AfiI CCNNNNNNNGG 4 cut(s) 155, 368, 395, 513
AgsI TTSAA 3 cut(s) 84, 119, 187
AjnI CCWGG 1 cut(s) 367
AluBI AGCT 3 cut(s) 212, 234, 386
AluI AGCT 3 cut(s) 212, 234, 386
Alw21I GWGCWC 2 cut(s) 103, 396
Alw26I GTCTC 1 cut(s) 26
AlwI GGATC 2 cut(s) 268, 464
AoxI GGCC 1 cut(s) 88
ApeKI GCWGC 4 cut(s) 58, 209, 827, 884
ApoI RAATTY 4 cut(s) 187, 198, 436, 485
Asp700I GAANNNNTTC 1 cut(s) 927
AspS9I GGNCC 1 cut(s) 516
AsuHPI GGTGA 1 cut(s) 479
AsuII TTCGAA 1 cut(s) 16
AsuNHI GCTAGC 1 cut(s) 416
AvaII GGWCC 1 cut(s) 516
BaeGI GKGCMC 1 cut(s) 612
BanI GGYRCC 1 cut(s) 680
BbsI GAAGAC 1 cut(s) 392
Bbv12I GWGCWC 2 cut(s) 103, 396
BbvI GCAGC 4 cut(s) 45, 221, 814, 896
BccI CCATC 4 cut(s) 343, 542, 811, 920
BceAI ACGGC 1 cut(s) 71
BcgI CGANNNNNNTGC 2 cut(s) 617, 651
BciT130I CCWGG 1 cut(s) 369
BcoDI GTCTC 1 cut(s) 26
BfaI CTAG 3 cut(s) 417, 663, 770
BfmI CTRYAG 4 cut(s) 510, 618, 828, 882
BfuAI ACCTGC 1 cut(s) 889
BisI GCNGC 4 cut(s) 59, 210, 828, 885
BlsI GCNGC 4 cut(s) 60, 211, 829, 886
BmcAI AGTACT 1 cut(s) 774
Bme1390I CCNGG 1 cut(s) 369
Bme18I GGWCC 1 cut(s) 516
BmgT120I GGNCC 1 cut(s) 516
BmiI GGNNCC 3 cut(s) 180, 517, 682
BmrFI CCNGG 1 cut(s) 369
BmrI ACTGGG 1 cut(s) 274
BmsI GCATC 4 cut(s) 18, 97, 470, 584
BmtI GCTAGC 1 cut(s) 420
BmuI ACTGGG 1 cut(s) 274
BpiI GAAGAC 1 cut(s) 392
BpmI CTGGAG 2 cut(s) 372, 630
Bpu10I CCTNAGC 1 cut(s) 221
Bpu14I TTCGAA 1 cut(s) 16
BsaJI CCNNGG 1 cut(s) 519
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 368, 395, 513
Bse1I ACTGG 4 cut(s) 199, 280, 389, 653
Bse3DI GCAATG 3 cut(s) 574, 633, 746
BseBI CCWGG 1 cut(s) 369
BseDI CCNNGG 1 cut(s) 519
BseGI GGATG 3 cut(s) 145, 499, 553
BseLI CCNNNNNNNGG 4 cut(s) 155, 368, 395, 513
BseMI GCAATG 3 cut(s) 574, 633, 746
BseMII CTCAG 2 cut(s) 235, 873
BseNI ACTGG 4 cut(s) 199, 280, 389, 653
BseSI GKGCMC 1 cut(s) 612
BseXI GCAGC 4 cut(s) 45, 221, 814, 896
BseYI CCCAGC 1 cut(s) 733
BsgI GTGCAG 1 cut(s) 57
Bsh1236I CGCG 2 cut(s) 26, 97
BshFI GGCC 1 cut(s) 90
BshNI GGYRCC 1 cut(s) 680
BsiHKAI GWGCWC 2 cut(s) 103, 396
BsiSI CCGG 1 cut(s) 684
BslFI GGGAC 1 cut(s) 529
BslI CCNNNNNNNGG 4 cut(s) 155, 368, 395, 513
BsmAI GTCTC 1 cut(s) 26
BsmFI GGGAC 1 cut(s) 529
BsnI GGCC 1 cut(s) 90
Bsp119I TTCGAA 1 cut(s) 16
Bsp1286I GDGCHC 3 cut(s) 103, 396, 612
Bsp1407I TGTACA 2 cut(s) 237, 258
Bsp143I GATC 3 cut(s) 64, 273, 469
Bsp68I TCGCGA 1 cut(s) 26
BspACI CCGC 1 cut(s) 95
BspANI GGCC 1 cut(s) 90
BspCNI CTCAG 2 cut(s) 234, 872
BspFNI CGCG 2 cut(s) 26, 97
BspLI GGNNCC 3 cut(s) 180, 517, 682
BspMAI CTGCAG 3 cut(s) 514, 832, 886
BspMI ACCTGC 1 cut(s) 889
BspOI GCTAGC 1 cut(s) 420
BspPI GGATC 2 cut(s) 268, 464
BspQI GCTCTTC 1 cut(s) 117
BspT104I TTCGAA 1 cut(s) 16
BspT107I GGYRCC 1 cut(s) 680
BsrDI GCAATG 3 cut(s) 574, 633, 746
BsrGI TGTACA 2 cut(s) 237, 258
BsrI ACTGG 4 cut(s) 199, 280, 389, 653
BssECI CCNNGG 1 cut(s) 519
BssMI GATC 3 cut(s) 64, 273, 469
Bst2UI CCWGG 1 cut(s) 369
Bst4CI ACNGT 1 cut(s) 520
Bst6I CTCTTC 2 cut(s) 117, 797
BstAPI GCANNNNNTGC 1 cut(s) 588
BstAUI TGTACA 2 cut(s) 237, 258
BstBI TTCGAA 1 cut(s) 16
BstC8I GCNNGC 3 cut(s) 99, 418, 753
BstDEI CTNAG 4 cut(s) 221, 334, 382, 859
BstDSI CCRYGG 1 cut(s) 519
BstF5I GGATG 3 cut(s) 145, 499, 553
BstFNI CGCG 2 cut(s) 26, 97
BstKTI GATC 3 cut(s) 67, 276, 472
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 3 cut(s) 64, 273, 469
BstMWI GCNNNNNNNGC 6 cut(s) 107, 134, 413, 588, 752, 884
BstNI CCWGG 1 cut(s) 369
BstSCI CCNGG 1 cut(s) 367
BstSFI CTRYAG 4 cut(s) 510, 618, 828, 882
BstSLI GKGCMC 1 cut(s) 612
BstUI CGCG 2 cut(s) 26, 97
BstV1I GCAGC 4 cut(s) 45, 221, 814, 896
BstV2I GAAGAC 1 cut(s) 392
BstX2I RGATCY 1 cut(s) 273
BstYI RGATCY 1 cut(s) 273
BsuRI GGCC 1 cut(s) 90
BtgI CCRYGG 1 cut(s) 519
BtgZI GCGATG 2 cut(s) 41, 269
BtsCI GGATG 3 cut(s) 145, 499, 553
BtsIMutI CAGTG 2 cut(s) 295, 396
BtuMI TCGCGA 1 cut(s) 26
BveI ACCTGC 1 cut(s) 889
Cac8I GCNNGC 3 cut(s) 99, 418, 753
Cfr13I GGNCC 1 cut(s) 516
CsiI ACCWGGT 1 cut(s) 367
Csp6I GTAC 5 cut(s) 238, 259, 325, 773, 790
CviQI GTAC 5 cut(s) 238, 259, 325, 773, 790
DdeI CTNAG 4 cut(s) 221, 334, 382, 859
DpnI GATC 3 cut(s) 66, 275, 471
DpnII GATC 3 cut(s) 64, 273, 469
Eam1104I CTCTTC 2 cut(s) 117, 797
EarI CTCTTC 2 cut(s) 117, 797
Eco32I GATATC 1 cut(s) 454
Eco47I GGWCC 1 cut(s) 516
EcoRI GAATTC 1 cut(s) 198
EcoRII CCWGG 1 cut(s) 367
EcoRV GATATC 1 cut(s) 454
FaqI GGGAC 1 cut(s) 529
FauNDI CATATG 2 cut(s) 301, 852
Fnu4HI GCNGC 4 cut(s) 59, 210, 828, 885
FokI GGATG 3 cut(s) 132, 506, 560
Fsp4HI GCNGC 4 cut(s) 59, 210, 828, 885
FspBI CTAG 3 cut(s) 417, 663, 770
GluI GCNGC 4 cut(s) 59, 210, 828, 885
GsaI CCCAGC 1 cut(s) 737
GsuI CTGGAG 2 cut(s) 372, 630
HaeIII GGCC 1 cut(s) 90
HapII CCGG 1 cut(s) 684
HinfI GANTC 1 cut(s) 629
HpaII CCGG 1 cut(s) 684
HphI GGTGA 1 cut(s) 479
Hpy166II GTNNAC 1 cut(s) 325
Hpy188I TCNGA 1 cut(s) 204
Hpy188III TCNNGA 7 cut(s) 25, 84, 104, 119, 223, 491, 916
Hpy8I GTNNAC 1 cut(s) 325
HpyAV CCTTC 2 cut(s) 651, 817
HpyCH4III ACNGT 1 cut(s) 520
HpyCH4V TGCA 7 cut(s) 74, 209, 512, 811, 830, 850, 884
HpyF10VI GCNNNNNNNGC 6 cut(s) 107, 134, 413, 588, 752, 884
HpyF3I CTNAG 4 cut(s) 221, 334, 382, 859
Kzo9I GATC 3 cut(s) 64, 273, 469
LguI GCTCTTC 1 cut(s) 117
LmnI GCTCC 2 cut(s) 391, 643
Lsp1109I GCAGC 4 cut(s) 45, 221, 814, 896
LweI GCATC 4 cut(s) 18, 97, 470, 584
MabI ACCWGGT 1 cut(s) 367
MaeI CTAG 3 cut(s) 417, 663, 770
MaeIII GTNAC 2 cut(s) 160, 371
MalI GATC 3 cut(s) 66, 275, 471
MboI GATC 3 cut(s) 64, 273, 469
MboII GAAGA 7 cut(s) 72, 104, 107, 392, 703, 757, 814
MfeI CAATTG 1 cut(s) 340
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 3 cut(s) 103, 396, 612
MluCI AATT 9 cut(s) 187, 198, 340, 436, 446, 485, 559, 700, 717
MlyI GAGTC 1 cut(s) 638
MmeI TCCRAC 2 cut(s) 625, 844
MnlI CCTC 5 cut(s) 80, 210, 239, 303, 868
MroXI GAANNNNTTC 1 cut(s) 927
MseI TTAA 1 cut(s) 168
MspI CCGG 1 cut(s) 684
MspR9I CCNGG 1 cut(s) 369
MunI CAATTG 1 cut(s) 340
MvaI CCWGG 1 cut(s) 369
MvnI CGCG 2 cut(s) 26, 97
MwoI GCNNNNNNNGC 6 cut(s) 107, 134, 413, 588, 752, 884
NdeI CATATG 2 cut(s) 301, 852
NdeII GATC 3 cut(s) 64, 273, 469
NheI GCTAGC 1 cut(s) 416
NlaIV GGNNCC 3 cut(s) 180, 517, 682
NruI TCGCGA 1 cut(s) 26
NspV TTCGAA 1 cut(s) 16
PaqCI CACCTGC 1 cut(s) 889
PciSI GCTCTTC 1 cut(s) 117
PdmI GAANNNNTTC 1 cut(s) 927
PflMI CCANNNNNTGG 1 cut(s) 368
PkrI GCNGC 4 cut(s) 60, 211, 829, 886
PleI GAGTC 1 cut(s) 637
PpsI GAGTC 1 cut(s) 637
PsiI TTATAA 1 cut(s) 411
Psp6I CCWGG 1 cut(s) 367
PspFI CCCAGC 1 cut(s) 733
PspGI CCWGG 1 cut(s) 367
PspN4I GGNNCC 3 cut(s) 180, 517, 682
PspPI GGNCC 1 cut(s) 516
PstI CTGCAG 3 cut(s) 514, 832, 886
PsuI RGATCY 1 cut(s) 273
RruI TCGCGA 1 cut(s) 26
RsaI GTAC 5 cut(s) 239, 260, 326, 774, 791
RsaNI GTAC 5 cut(s) 238, 259, 325, 773, 790
SapI GCTCTTC 1 cut(s) 117
SaqAI TTAA 1 cut(s) 168
SatI GCNGC 4 cut(s) 59, 210, 828, 885
Sau3AI GATC 3 cut(s) 64, 273, 469
Sau96I GGNCC 1 cut(s) 516
SbfI CCTGCAGG 1 cut(s) 514
ScaI AGTACT 1 cut(s) 774
SchI GAGTC 1 cut(s) 638
ScrFI CCNGG 1 cut(s) 369
SdaI CCTGCAGG 1 cut(s) 514
SduI GDGCHC 3 cut(s) 103, 396, 612
SetI ASST 9 cut(s) 160, 167, 214, 236, 250, 370, 388, 860, 883
SexAI ACCWGGT 1 cut(s) 367
SfaNI GCATC 4 cut(s) 18, 97, 470, 584
SfcI CTRYAG 4 cut(s) 510, 618, 828, 882
SfuI TTCGAA 1 cut(s) 16
SinI GGWCC 1 cut(s) 516
Sse8387I CCTGCAGG 1 cut(s) 514
Sse9I AATT 9 cut(s) 187, 198, 340, 436, 446, 485, 559, 700, 717
SsiI CCGC 1 cut(s) 95
SspMI CTAG 3 cut(s) 417, 663, 770
StyD4I CCNGG 1 cut(s) 367
TaaI ACNGT 1 cut(s) 520
TaqI TCGA 5 cut(s) 16, 347, 627, 898, 915
TaqII GACCGA 1 cut(s) 386
TasI AATT 9 cut(s) 187, 198, 340, 436, 446, 485, 559, 700, 717
TatI WGTACW 4 cut(s) 237, 258, 772, 789
Tru1I TTAA 1 cut(s) 168
Tru9I TTAA 1 cut(s) 168
TscAI CASTG 2 cut(s) 295, 396
TseI GCWGC 4 cut(s) 58, 209, 827, 884
TspDTI ATGAA 1 cut(s) 134
TspRI CASTG 2 cut(s) 295, 396
Van91I CCANNNNNTGG 1 cut(s) 368
VpaK11BI GGWCC 1 cut(s) 516
XapI RAATTY 4 cut(s) 187, 198, 436, 485
XmnI GAANNNNTTC 1 cut(s) 927
XspI CTAG 3 cut(s) 417, 663, 770
ZrmI AGTACT 1 cut(s) 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.