pycom04g15700

Protein of unknown function (DUF1191)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0014156
Physical Location & Seq
Reverse (-)
18503447 .. 18504391
945 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g15700.1

Sequence Viewer

Length: 945 bp
ATGGGGCTTCTTTTCCGAAGTCTCGCGATGCTGTATTTTGTGATATGTTTCTCCCGGCTGCCTGATGTGTCTGCACAATCCTCAAGAGGCTCAGCACGCGGTCTTGATGTGCTTCTGCAAGATTATGCCTACAGGGCTTTTGTTCATCCCAAGACTGGTGTTATATTTGATGGTAGTGTTCCCTCGAATTTGACTGGAATTCAGATTGCAGCAATAAGGCTCAGGAGTGGTAGCTTGTACAGAAAAGGTTTTGACATGTACAAAGAGTTTGAGATCCCCGAGGGTGTCACTGAGAGTCCGTATGTGGAGAGGCTTGTTTTGGTGTACCAAAACTTGGGCAATTGGTCAATGGTGTATTACCCGTTACCTGGTTACTCTTACTTAGCTCCAGTACTCGGTCTTCTTGCTTATGATGCTGGCAACCTATCAGCGAAAAATCTGCCCGAATTGGATATCAGGGCATCTGGTGATCCCATAACGATCGAATTCCAGGATGTGAAACCGGCCCCTGCAGGGACAATGGCAAAGTGTGTTTCGTTTGATTCGGACGGTTCAGTCAATTTCAGCAATGTGGAATCAGGCAATATATGCTCAACAGTCCAACAGGGGCACTTCTCTATAGCGGTCGAGTCCACTGCTCCTTCTCCAGCACCAGTCTCTCCAAGTCCTACCCCTTCAATCCCTAGTGGTAAACAAAAGAAGAAGAGTAATACAAAAGTGTGGATAATTGTTGGGTCTGTGGTGGGTGGATTAGCATTGTTGGCATTGTTGTCGTTCTTAGTACTATGGGCGAAAAAGTACAGGGAAAGGAAGAATTTACAACGGATGGAGAAGGCAGCAGATGTAGGAGAAGCCTTGCAAATGACCTCAGTCGGAGATGCAAAGGCACCTGCGGCAACATTTACACGAACGCAACCGACCATCGAGACTGAATACGTTCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1191

Protein Analysis

315

Amino Acids

34.05

Weight (kDa)

8.61

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1191 PF06697 31 - 210 1.2e-74 Protein of unknown function (DUF1191)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G08600
fragaria_vesca FvH4_3g04260 FvH4_6g09410
malus_domestica MD04G1178000.v1.1 MD12G1193600.v1.1
prunus_persica Prupe.6G297900_v2.0.a1
pyrus_communis pycom04g15700 pycom12g17980
rosa_chinensis RchiOBHm_Chr3g0459851
rosa_laevigata RLG00000025056
rosa_multiflora Rmu_sc0000240.1_g000040
rosa_roxburghii Rroxscaffold_6G00419960
rosa_rugosa Rorug03G0038100
rosa_samantha Rh3AG097000 Rh3BG099800 Rh3CG101600 Rh3DG101200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 898
AasI GACNNNNNNGTC 1 cut(s) 554
Acc36I ACCTGC 1 cut(s) 898
AccB1I GGYRCC 1 cut(s) 886
AccB7I CCANNNNNTGG 1 cut(s) 334
AccII CGCG 2 cut(s) 26, 99
AciI CCGC 3 cut(s) 99, 623, 893
AclWI GGATC 2 cut(s) 268, 464
AcsI RAATTY 4 cut(s) 187, 198, 485, 814
AfaI GTAC 6 cut(s) 239, 260, 326, 393, 783, 800
AfiI CCNNNNNNNGG 5 cut(s) 155, 334, 368, 395, 513
AflIII ACRYGT 1 cut(s) 255
AgsI TTSAA 1 cut(s) 678
AjnI CCWGG 2 cut(s) 367, 489
AluBI AGCT 2 cut(s) 234, 386
AluI AGCT 2 cut(s) 234, 386
Alw26I GTCTC 3 cut(s) 26, 661, 920
AlwI GGATC 2 cut(s) 268, 464
Ama87I CYCGRG 1 cut(s) 278
AoxI GGCC 1 cut(s) 504
ApeKI GCWGC 3 cut(s) 58, 209, 836
ApoI RAATTY 4 cut(s) 187, 198, 485, 814
Asp700I GAANNNNTTC 1 cut(s) 936
AspS9I GGNCC 1 cut(s) 505
AsuC2I CCSGG 1 cut(s) 55
AsuHPI GGTGA 1 cut(s) 479
AvaI CYCGRG 1 cut(s) 278
BaeGI GKGCMC 1 cut(s) 612
BanI GGYRCC 1 cut(s) 886
BarI GAAGNNNNNNTAC 2 cut(s) 384, 416
BbsI GAAGAC 1 cut(s) 392
BbvI GCAGC 3 cut(s) 45, 221, 848
BccI CCATC 3 cut(s) 164, 820, 929
BcgI CGANNNNNNTGC 6 cut(s) 421, 455, 617, 651, 753, 787
BciT130I CCWGG 2 cut(s) 369, 491
BcnI CCSGG 1 cut(s) 55
BcoDI GTCTC 3 cut(s) 26, 661, 920
BfaI CTAG 1 cut(s) 684
BfmI CTRYAG 3 cut(s) 130, 510, 618
BfuAI ACCTGC 1 cut(s) 898
BglI GCCNNNNNGGC 1 cut(s) 134
BisI GCNGC 4 cut(s) 59, 210, 837, 894
BlpI GCTNAGC 1 cut(s) 91
BlsI GCNGC 4 cut(s) 60, 211, 838, 895
BmcAI AGTACT 2 cut(s) 393, 783
Bme1390I CCNGG 3 cut(s) 55, 369, 491
BmeT110I CYCGRG 1 cut(s) 278
BmgT120I GGNCC 1 cut(s) 505
BmiI GGNNCC 2 cut(s) 507, 888
BmrFI CCNGG 3 cut(s) 55, 369, 491
BmsI GCATC 4 cut(s) 18, 403, 470, 868
BoxI GACNNNNGTC 1 cut(s) 869
BpiI GAAGAC 1 cut(s) 392
BpmI CTGGAG 2 cut(s) 372, 630
Bpu10I CCTNAGC 1 cut(s) 221
Bpu1102I GCTNAGC 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 67
BpuMI CCSGG 1 cut(s) 55
BsaJI CCNNGG 1 cut(s) 279
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 334, 368, 395, 513
Bse118I RCCGGY 1 cut(s) 502
Bse1I ACTGG 4 cut(s) 160, 199, 389, 653
Bse3DI GCAATG 1 cut(s) 574
BseBI CCWGG 2 cut(s) 369, 491
BseDI CCNNGG 1 cut(s) 279
BseGI GGATG 3 cut(s) 145, 499, 831
BseLI CCNNNNNNNGG 5 cut(s) 155, 334, 368, 395, 513
BseMI GCAATG 1 cut(s) 574
BseMII CTCAG 4 cut(s) 105, 235, 282, 882
BseNI ACTGG 4 cut(s) 160, 199, 389, 653
BseSI GKGCMC 1 cut(s) 612
BseXI GCAGC 3 cut(s) 45, 221, 848
BsgI GTGCAG 1 cut(s) 57
Bsh1236I CGCG 2 cut(s) 26, 99
Bsh1285I CGRYCG 2 cut(s) 483, 627
BshFI GGCC 1 cut(s) 506
BshNI GGYRCC 1 cut(s) 886
BsiEI CGRYCG 2 cut(s) 483, 627
BsiHKCI CYCGRG 1 cut(s) 278
BsiSI CCGG 2 cut(s) 55, 503
BslFI GGGAC 1 cut(s) 529
BslI CCNNNNNNNGG 5 cut(s) 155, 334, 368, 395, 513
BsmAI GTCTC 3 cut(s) 26, 661, 920
BsmFI GGGAC 1 cut(s) 529
BsnI GGCC 1 cut(s) 506
BsoBI CYCGRG 1 cut(s) 278
Bsp1286I GDGCHC 1 cut(s) 612
Bsp1407I TGTACA 2 cut(s) 237, 258
Bsp143I GATC 3 cut(s) 273, 469, 480
Bsp1720I GCTNAGC 1 cut(s) 91
Bsp68I TCGCGA 1 cut(s) 26
BspACI CCGC 3 cut(s) 99, 623, 893
BspANI GGCC 1 cut(s) 506
BspCNI CTCAG 4 cut(s) 104, 234, 283, 881
BspFNI CGCG 2 cut(s) 26, 99
BspLI GGNNCC 2 cut(s) 507, 888
BspMAI CTGCAG 1 cut(s) 514
BspMI ACCTGC 1 cut(s) 898
BspPI GGATC 2 cut(s) 268, 464
BspT107I GGYRCC 1 cut(s) 886
BsrDI GCAATG 1 cut(s) 574
BsrFI RCCGGY 1 cut(s) 502
BsrGI TGTACA 2 cut(s) 237, 258
BsrI ACTGG 4 cut(s) 160, 199, 389, 653
BssAI RCCGGY 1 cut(s) 502
BssECI CCNNGG 1 cut(s) 279
BssMI GATC 3 cut(s) 273, 469, 480
Bst2UI CCWGG 2 cut(s) 369, 491
Bst4CI ACNGT 2 cut(s) 551, 598
Bst6I CTCTTC 1 cut(s) 698
BstAPI GCANNNNNTGC 1 cut(s) 588
BstAUI TGTACA 2 cut(s) 237, 258
BstC8I GCNNGC 2 cut(s) 97, 418
BstDEI CTNAG 6 cut(s) 91, 221, 291, 382, 778, 868
BstF5I GGATG 3 cut(s) 145, 499, 831
BstFNI CGCG 2 cut(s) 26, 99
BstKTI GATC 3 cut(s) 276, 472, 483
BstMAI GTCTC 3 cut(s) 26, 661, 920
BstMBI GATC 3 cut(s) 273, 469, 480
BstMCI CGRYCG 2 cut(s) 483, 627
BstMWI GCNNNNNNNGC 6 cut(s) 96, 134, 413, 588, 761, 893
BstNI CCWGG 2 cut(s) 369, 491
BstNSI RCATGY 1 cut(s) 259
BstPAI GACNNNNGTC 1 cut(s) 869
BstSCI CCNGG 3 cut(s) 53, 367, 489
BstSFI CTRYAG 3 cut(s) 130, 510, 618
BstSLI GKGCMC 1 cut(s) 612
BstUI CGCG 2 cut(s) 26, 99
BstV1I GCAGC 3 cut(s) 45, 221, 848
BstV2I GAAGAC 1 cut(s) 392
BstX2I RGATCY 1 cut(s) 273
BstYI RGATCY 1 cut(s) 273
BsuRI GGCC 1 cut(s) 506
BtgZI GCGATG 1 cut(s) 41
BtsCI GGATG 3 cut(s) 145, 499, 831
BtsI GCAGTG 1 cut(s) 633
BtsIMutI CAGTG 2 cut(s) 288, 633
BtuMI TCGCGA 1 cut(s) 26
BveI ACCTGC 1 cut(s) 898
Cac8I GCNNGC 2 cut(s) 97, 418
Cfr10I RCCGGY 1 cut(s) 502
Cfr13I GGNCC 1 cut(s) 505
CsiI ACCWGGT 1 cut(s) 367
Csp6I GTAC 6 cut(s) 238, 259, 325, 392, 782, 799
CviAII CATG 1 cut(s) 256
CviQI GTAC 6 cut(s) 238, 259, 325, 392, 782, 799
DdeI CTNAG 6 cut(s) 91, 221, 291, 382, 778, 868
DpnI GATC 3 cut(s) 275, 471, 482
DpnII GATC 3 cut(s) 273, 469, 480
DrdI GACNNNNNNGTC 1 cut(s) 554
DseDI GACNNNNNNGTC 1 cut(s) 554
Eam1104I CTCTTC 1 cut(s) 698
EarI CTCTTC 1 cut(s) 698
Eco32I GATATC 1 cut(s) 454
Eco88I CYCGRG 1 cut(s) 278
EcoRI GAATTC 2 cut(s) 198, 485
EcoRII CCWGG 2 cut(s) 367, 489
EcoRV GATATC 1 cut(s) 454
FaeI CATG 1 cut(s) 259
FaqI GGGAC 1 cut(s) 529
FatI CATG 1 cut(s) 255
Fnu4HI GCNGC 4 cut(s) 59, 210, 837, 894
FokI GGATG 3 cut(s) 132, 506, 838
Fsp4HI GCNGC 4 cut(s) 59, 210, 837, 894
FspBI CTAG 1 cut(s) 684
GluI GCNGC 4 cut(s) 59, 210, 837, 894
GsuI CTGGAG 2 cut(s) 372, 630
HaeIII GGCC 1 cut(s) 506
HapII CCGG 2 cut(s) 55, 503
Hin1II CATG 1 cut(s) 259
HinfI GANTC 4 cut(s) 295, 542, 575, 629
HpaII CCGG 2 cut(s) 55, 503
HphI GGTGA 1 cut(s) 479
Hpy166II GTNNAC 3 cut(s) 325, 633, 692
Hpy188I TCNGA 4 cut(s) 17, 204, 547, 875
Hpy188III TCNNGA 5 cut(s) 25, 84, 104, 223, 925
Hpy8I GTNNAC 3 cut(s) 325, 633, 692
HpyAV CCTTC 3 cut(s) 651, 684, 826
HpyCH4III ACNGT 2 cut(s) 551, 598
HpyCH4IV ACGT 1 cut(s) 936
HpyCH4V TGCA 6 cut(s) 74, 118, 209, 512, 859, 881
HpyF10VI GCNNNNNNNGC 6 cut(s) 96, 134, 413, 588, 761, 893
HpyF3I CTNAG 6 cut(s) 91, 221, 291, 382, 778, 868
HpySE526I ACGT 1 cut(s) 936
Hsp92II CATG 1 cut(s) 259
Kzo9I GATC 3 cut(s) 273, 469, 480
LmnI GCTCC 2 cut(s) 391, 643
Lsp1109I GCAGC 3 cut(s) 45, 221, 848
LweI GCATC 4 cut(s) 18, 403, 470, 868
MabI ACCWGGT 1 cut(s) 367
MaeI CTAG 1 cut(s) 684
MaeII ACGT 1 cut(s) 936
MaeIII GTNAC 3 cut(s) 286, 363, 371
MalI GATC 3 cut(s) 275, 471, 482
MboI GATC 3 cut(s) 273, 469, 480
MboII GAAGA 4 cut(s) 392, 712, 715, 823
MfeI CAATTG 1 cut(s) 340
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 1 cut(s) 612
MluCI AATT 8 cut(s) 187, 198, 340, 446, 485, 559, 726, 814
MlyI GAGTC 2 cut(s) 304, 638
MmeI TCCRAC 2 cut(s) 625, 853
MnlI CCTC 6 cut(s) 80, 91, 193, 274, 303, 877
MroXI GAANNNNTTC 1 cut(s) 936
MspI CCGG 2 cut(s) 55, 503
MspR9I CCNGG 3 cut(s) 55, 369, 491
MunI CAATTG 1 cut(s) 340
MvaI CCWGG 2 cut(s) 369, 491
MvnI CGCG 2 cut(s) 26, 99
MwoI GCNNNNNNNGC 6 cut(s) 96, 134, 413, 588, 761, 893
NciI CCSGG 1 cut(s) 55
NdeII GATC 3 cut(s) 273, 469, 480
NlaIII CATG 1 cut(s) 259
NlaIV GGNNCC 2 cut(s) 507, 888
NmuCI GTSAC 1 cut(s) 286
NruI TCGCGA 1 cut(s) 26
NspI RCATGY 1 cut(s) 259
PaqCI CACCTGC 1 cut(s) 898
PciI ACATGT 1 cut(s) 255
PdmI GAANNNNTTC 1 cut(s) 936
PfeI GAWTC 2 cut(s) 542, 575
PflMI CCANNNNNTGG 1 cut(s) 334
PfoI TCCNGGA 1 cut(s) 489
PkrI GCNGC 4 cut(s) 60, 211, 838, 895
Ple19I CGATCG 1 cut(s) 483
PleI GAGTC 2 cut(s) 303, 637
PpsI GAGTC 2 cut(s) 303, 637
PscI ACATGT 1 cut(s) 255
PshAI GACNNNNGTC 1 cut(s) 869
Psp6I CCWGG 2 cut(s) 367, 489
PspGI CCWGG 2 cut(s) 367, 489
PspN4I GGNNCC 2 cut(s) 507, 888
PspPI GGNCC 1 cut(s) 505
PstI CTGCAG 1 cut(s) 514
PsuI RGATCY 1 cut(s) 273
PvuI CGATCG 1 cut(s) 483
RruI TCGCGA 1 cut(s) 26
RsaI GTAC 6 cut(s) 239, 260, 326, 393, 783, 800
RsaNI GTAC 6 cut(s) 238, 259, 325, 392, 782, 799
SatI GCNGC 4 cut(s) 59, 210, 837, 894
Sau3AI GATC 3 cut(s) 273, 469, 480
Sau96I GGNCC 1 cut(s) 505
SbfI CCTGCAGG 1 cut(s) 514
ScaI AGTACT 2 cut(s) 393, 783
SchI GAGTC 2 cut(s) 304, 638
ScrFI CCNGG 3 cut(s) 55, 369, 491
SdaI CCTGCAGG 1 cut(s) 514
SduI GDGCHC 1 cut(s) 612
SetI ASST 8 cut(s) 236, 250, 370, 388, 426, 869, 892, 939
SexAI ACCWGGT 1 cut(s) 367
SfaNI GCATC 4 cut(s) 18, 403, 470, 868
SfcI CTRYAG 3 cut(s) 130, 510, 618
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
Sse8387I CCTGCAGG 1 cut(s) 514
Sse9I AATT 8 cut(s) 187, 198, 340, 446, 485, 559, 726, 814
SsiI CCGC 3 cut(s) 99, 623, 893
SspMI CTAG 1 cut(s) 684
StyD4I CCNGG 3 cut(s) 53, 367, 489
TaaI ACNGT 2 cut(s) 551, 598
TaiI ACGT 1 cut(s) 939
TaqI TCGA 4 cut(s) 185, 483, 627, 924
TaqII GACCGA 1 cut(s) 386
TasI AATT 8 cut(s) 187, 198, 340, 446, 485, 559, 726, 814
TatI WGTACW 5 cut(s) 237, 258, 391, 781, 798
TauI GCSGC 1 cut(s) 896
TfiI GAWTC 2 cut(s) 542, 575
TscAI CASTG 2 cut(s) 295, 640
TseFI GTSAC 1 cut(s) 286
TseI GCWGC 3 cut(s) 58, 209, 836
Tsp45I GTSAC 1 cut(s) 286
TspDTI ATGAA 1 cut(s) 134
TspGWI ACGGA 2 cut(s) 288, 838
TspRI CASTG 2 cut(s) 295, 640
Van91I CCANNNNNTGG 1 cut(s) 334
XapI RAATTY 4 cut(s) 187, 198, 485, 814
XceI RCATGY 1 cut(s) 259
XmnI GAANNNNTTC 1 cut(s) 936
XspI CTAG 1 cut(s) 684
ZrmI AGTACT 2 cut(s) 393, 783
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.