Prupe.6G302500_v2.0.a1

Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0007386
Physical Location & Seq
Forward (+)
27435067 .. 27440257
5191 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G302500.1

Sequence Viewer

Length: 3402 bp
ATGTCTTCTTCAAGACCCAGCGACTCATCCACCAATTCAGGGCGGTCTAGACACAGTGCTAGAATTATTGCTCAGACAACTGTTGATGCCAAGCTGCATGCAGATTTTGAGGAGTCAGGTAGTTCCTTTGACTACTCGAACTCGGTGCGCGTTAGTGGTTCAGTTGGAAGGGATCAACAACCTAGGTCAGATAAAGTGACCACTGCTTATCTCCATCACATACAGAAAGGCAAGCTGATCCAGCCATTCGGATGCTTGCTAGCCTTAGATGAGAAAACTTTCAAGGTCATTGCATACAGTGAGAATGCCCCTGAAATGCTGACCATGGTCAGTCATGCAGTCCCAAGCGTTGGGGACTACCCTGTTCTTGGCGTAGGAACAGATATAAGAACAATTTTCACTGCCCCTAGTGCCTCTGCATTGCATAAGGCCCTTGGATTCGGAGAGGTTTCTCTCTTGAATCCCATCTTAGTCCATTGCAAGACCTCTGGCAAGCCTTTTTATGCAATAACCCATCGAGTAACGGGCAGTTTGATCATTGACTTCGAGCCAGTGAAGCCTTATGAAGTCCCTATGACTGCTGCTGGGGCCCTGCAGTCATACAAGCTGGCAGCTAAAGCAATTGCCCGATTGCAGTCTTTGCCTAGTGGGAGCATGGAGAGGCTTTGTGATACAATGGTCCAAGAGGTTTTTGAACTCACCGGTTATGACAGGGTGATGGCCTATAAATTTCATGATGATGATCATGGGGAAGTGGTCTCTGAGATTACGAAGCCTGGCCTGGAGCCATATCTAGGTTTGCATTATCCATCCACTGACATACCTCAGGCTTCGCGGTTCCTATTTATGAAGAATAAGGTCCGAATGATTGTTGACTGTTGTGCAAAACAGGTGAAGGTGCTTCAAGATGAGAAGCTTCCATTTGATCTCACATTGTGCGGTTCAACCCTAAGATCCCCACATAGTTGCCATTTACAATATATGAAGAATATGGAATCTATTGCATCTCTTGTTATGGCAGTAGTGGTTAACGAGGGGGATGATGAGGTAGCCAGTCCTGATTCTGTTCAGCCTCAAAAAAGAAAGAGACTTTGGGGTTTGGTAGTATGTCATAATACAAGTCCAAGATTTGTTCCTTTCCCTCTCAGGTATGCCTGTGAGTTTCTAGCTCAAGTATTTGCCATCCATGTCAATAAGGAAATAGAGTTGGAAGATCAGATGGTTGAGAAGAACATCCTGCGCACCCAAACGCTGTTGTGTGATATGTTGTTACGAGATGCACCCTTGGGTATTGTGTCACAGAGCCCTAATATTATGGATCTAGTGAAATGTGATGGAGCTGCCCTATTATACAAGAGCAAGATATGGAGACTTGGCATAACTCCAAGTGACTTCCAGCTTCATGACATAGCCTCGTGGCTCGCTGAGTACCATATGGATTCCACAGGTTTGAGTACGGATAGTTTGTATGACGCAGGGTTCCCAGGGGCTCTTGCTCTTGGTGATGTAGTATGTGGAATGGCAGCTGTGAGGATAACTTCCAAGGACATGCTATTCTGGTTTCGATCCCACACTGCGGCAGAAATTCGATGGGGTGGTGCAAAACATGAATCTGGTGAGAAGGATGATGGTTGGAGAATGCACCCTAGATCATCATTCAAGGCTTTCCTTGAAGTTGTCAAGTCAAGGAGCTTACCTTGGAAGGACTTTGAAATGGATGCAATTCATTCTTTGCAGCTTATTCTGAGGAATGCATTCAAAGATGTTGAAACTGTGGATGTAAACCCCAACGCAATCCATGTAAAGCTTAGTGACCTAAAAATTGAAGGCATGCAAGAACTGGAAGCAGTGACAAGCGAGATGGTCCGTTTGATTGAAACAGCCACAGTTCCAATTTTGGCGGTTGATGTTGATGGGCTGGTTAATGGTTGGAATACAAAAATTTCTGAGTTAACTGGTCTCTCTGTTGATAAAGCAATTGGAAACCATTTGCTCTCGCTCGTGGAAGATTCTTCAACTAAAATGGTGAAAAGGATGTTGGACTTGGCGTTGCATGGCAAAGAGGAACAAAACATCCAATTTGAGATAAAAACACATGGTTCTAGGAGTGACCTTGGTCCCATCAGCTTAGTTGTGAATGCTTGTGCCAGCAGAGACATTCGTGAAAATGTTGTGGGGGTTTGTTTTGTGGCCCAGGATATCACTGGTCAGAAGACTGTGATGGACAAGTTCACCCGGATTGAAGGTGATTACAAGGCAATTGTACAGAACCCAAACCCGTTGATCCCCCCAATATTTGGTACTGATGAATTTGGCTGGTGTTCTGAGTGGAATCCAGCGATGACGAAGTTAACTGGGTGGAAACGAGAGGAGGTAATAGATAAAATGCTGTTGGGGGAGGTTTTTGGGATCAACATGGCCTGTTGTCCTCTGAAGAGTCAAGAAGCTTTCGTAAATCTTGGTATTGTACTTAACCATGCCATGACAGGTCAGGTATCCGAAAAGGTTCCTTTTGGTTTCAGTGCTCGCAGTGGAAAGCACATAGAATGCCTGTTGTGTGTGAGCAAGAAATTGGACAGTGAGGGCTCAGTCACTGGGGTGTTTTGCTTCTTGCAGCTGGCTAGCCCAGAGCTGCAACAAGCACTCCATGTCCAGCGCTTGTCAGAACAAACTGCTGTGAAGAGATCGAAAGAATTGTCTTATATTAAAAGGCAGATCAGGAATCCTTTAGCTGGTATAATGTTTTCTCGGAAAATGATGGAGGGTACTGAGTTGGGAACAGAGCAAAAACAGCTTCTGCATACTAGTGCCCAGTGCCAGCACCAGCTCAACAAAATACTAGATGACTCGGATCTTGACACCATCATTGACGGCTACTTGGACCTGGAAATGGTGGAGTTCACTTTGCATGAAGTACTGCTTGCCTCAGTCAGTCAAGTAATGATTAAGAGCAATGCCAAGAGTATCCAGATTGTCCATGATGCAGCAGAAGAGATCATGAATGAGACCTTGTATGGGGATAGTCTTAGGCTTCAACAAGTCTTGGCTGATTTCTTAGCCGTTTCAATTAATTTTATGCCAACCGGAGGCCAGCTTACTATTGCAGCCAATTTGACCAAAGATCAGTTAGGACAATCCGTTCATCTTGTGCATTTGGAGCTCAGGATAACACATGCGGGTGGTGGGATTCCGGAAGGATTGCTGAACCAGATGTTTGGAAACGACATAGCCATATCTGAGGAGGGAATTGGCCTGCTCGTGAGCAGTAGACTGGTGAAGCTCATGAACGGAGACATAAGGTATCTCAGGGAAGCGGGCAAGGCAACCTTCATCATATCCGTGGAACTTGCTGCTGCACACAAGTTGAGGTCCTCTATAACCCGGTCTGACAGTAGACATGAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009791 GO:0009881 GO:0009883 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010018 GO:0010114 GO:0010161 GO:0010201 GO:0010203 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017148 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031516 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0034248 GO:0034249 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046685 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051606 GO:0051716 GO:0055122 GO:0060089 GO:0060255 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0071491 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140096 GO:1901363 GO:1901564 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

1134

Amino Acids

125.43

Weight (kDa)

5.95

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1241
AccB7I CCANNNNNTGG 2 cut(s) 350, 2297
AccI GTMKAC 2 cut(s) 3268, 3394
AccII CGCG 2 cut(s) 150, 835
AccIII TCCGGA 1 cut(s) 3190
AciI CCGC 7 cut(s) 43, 835, 939, 1577, 1901, 3176, 3314
AclWI GGATC 8 cut(s) 180, 232, 948, 1326, 1560, 2278, 2417, 2859
AcsI RAATTY 4 cut(s) 728, 1584, 1941, 2309
AcuI CTGAAG 1 cut(s) 2453
AdeI CACNNNGTG 1 cut(s) 936
AfaI GTAC 7 cut(s) 1430, 1456, 2265, 2302, 2469, 2767, 2916
AfeI AGCGCT 1 cut(s) 2657
AgeI ACCGGT 1 cut(s) 701
AhlI ACTAGT 1 cut(s) 2804
AjnI CCWGG 5 cut(s) 775, 780, 1483, 2193, 2883
AjuI GAANNNNNNNTTGG 4 cut(s) 1075, 1107, 2021, 2053
AleI CACNNNNGTG 1 cut(s) 2597
AloI GAACNNNNNNTCC 4 cut(s) 2058, 2090, 3123, 3155
Alw21I GWGCWC 2 cut(s) 2527, 3162
Alw26I GTCTC 7 cut(s) 763, 1081, 1363, 1964, 2148, 2999, 3285
AlwI GGATC 8 cut(s) 180, 232, 948, 1326, 1560, 2278, 2417, 2859
AlwNI CAGNNNCTG 2 cut(s) 2594, 2797
Aor13HI TCCGGA 1 cut(s) 3190
Aor51HI AGCGCT 1 cut(s) 2657
AoxI GGCC 8 cut(s) 429, 588, 720, 778, 2190, 2418, 3088, 3250
ApaI GGGCCC 1 cut(s) 592
ApoI RAATTY 4 cut(s) 728, 1584, 1941, 2309
ArsI GACNNNNNNTTYG 2 cut(s) 2681, 2713
AseI ATTAAT 1 cut(s) 3069
AsiGI ACCGGT 1 cut(s) 701
Asp700I GAANNNNTTC 3 cut(s) 278, 1754, 2505
AspA2I CCTAGG 1 cut(s) 182
AspLEI GCGC 3 cut(s) 150, 1242, 2658
AsuC2I CCSGG 2 cut(s) 2236, 3382
AsuHPI GGTGA 9 cut(s) 691, 727, 904, 1514, 1628, 2038, 2224, 2258, 3286
AsuNHI GCTAGC 2 cut(s) 259, 2621
AvaII GGWCC 6 cut(s) 679, 859, 1864, 2117, 2881, 3369
AvrII CCTAGG 1 cut(s) 182
AxyI CCTNAGG 1 cut(s) 825
BaeGI GKGCMC 2 cut(s) 592, 2812
BaeI ACNNNNGTAYC 2 cut(s) 663, 696
BanII GRGCYC 5 cut(s) 592, 1307, 1492, 2588, 3162
BauI CACGAG 3 cut(s) 1414, 2000, 3257
BbsI GAAGAC 1 cut(s) 2219
Bbv12I GWGCWC 2 cut(s) 2527, 3162
BceAI ACGGC 2 cut(s) 2887, 3044
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciT130I CCWGG 5 cut(s) 777, 782, 1485, 2195, 2885
BciVI GTATCC 2 cut(s) 2506, 2975
BclI TGATCA 2 cut(s) 534, 742
BcnI CCSGG 2 cut(s) 2236, 3382
BcoDI GTCTC 7 cut(s) 763, 1081, 1363, 1964, 2148, 2999, 3285
BcuI ACTAGT 1 cut(s) 2804
BfmI CTRYAG 1 cut(s) 593
BfoI RGCGCY 1 cut(s) 2659
BfuI GTATCC 2 cut(s) 2506, 2975
BlnI CCTAGG 1 cut(s) 182
BmcAI AGTACT 1 cut(s) 2916
Bme1390I CCNGG 7 cut(s) 777, 782, 1485, 2195, 2236, 2885, 3382
Bme18I GGWCC 6 cut(s) 679, 859, 1864, 2117, 2881, 3369
BmiI GGNNCC 7 cut(s) 589, 590, 786, 839, 1481, 2119, 2508
BmrFI CCNGG 7 cut(s) 777, 782, 1485, 2195, 2236, 2885, 3382
BmrI ACTGGG 3 cut(s) 2364, 2604, 2806
BmsI GCATC 6 cut(s) 76, 242, 1013, 1267, 1708, 2971
BmtI GCTAGC 2 cut(s) 263, 2625
BmuI ACTGGG 3 cut(s) 2364, 2604, 2806
BoxI GACNNNNGTC 2 cut(s) 326, 2115
BpiI GAAGAC 1 cut(s) 2219
BpmI CTGGAG 1 cut(s) 803
Bpu10I CCTNAGC 1 cut(s) 3161
BpuEI CTTGAG 1 cut(s) 1155
BpuMI CCSGG 2 cut(s) 2236, 3382
BsaBI GATNNNNATC 1 cut(s) 741
BsaI GGTCTC 3 cut(s) 763, 1964, 2999
BsaWI WCCGGW 3 cut(s) 701, 3083, 3190
BsaXI ACNNNNNCTCC 2 cut(s) 2628, 2658
Bse118I RCCGGY 1 cut(s) 701
Bse1I ACTGG 9 cut(s) 551, 1053, 1845, 1960, 2209, 2359, 2599, 2812, 3276
Bse21I CCTNAGG 1 cut(s) 825
Bse3DI GCAATG 4 cut(s) 288, 419, 475, 2959
Bse8I GATNNNNATC 1 cut(s) 741
BseAI TCCGGA 1 cut(s) 3190
BseBI CCWGG 5 cut(s) 777, 782, 1485, 2195, 2885
BseJI GATNNNNATC 1 cut(s) 741
BseMI GCAATG 4 cut(s) 288, 419, 475, 2959
BseNI ACTGG 9 cut(s) 551, 1053, 1845, 1960, 2209, 2359, 2599, 2812, 3276
BseRI GAGGAG 3 cut(s) 125, 2384, 3254
BseSI GKGCMC 2 cut(s) 592, 2812
BseYI CCCAGC 2 cut(s) 17, 584
BsgI GTGCAG 1 cut(s) 3339
Bsh1236I CGCG 2 cut(s) 150, 835
BshFI GGCC 8 cut(s) 431, 590, 722, 780, 2192, 2420, 3090, 3252
BshTI ACCGGT 1 cut(s) 701
BsiHKAI GWGCWC 2 cut(s) 2527, 3162
BsiSI CCGG 5 cut(s) 702, 2236, 3084, 3191, 3382
BslFI GGGAC 4 cut(s) 326, 368, 554, 2103
BsmAI GTCTC 7 cut(s) 763, 1081, 1363, 1964, 2148, 2999, 3285
BsmFI GGGAC 4 cut(s) 326, 368, 554, 2103
BsmI GAATGC 6 cut(s) 310, 1644, 1754, 1756, 2143, 2552
BsnI GGCC 8 cut(s) 431, 590, 722, 780, 2192, 2420, 3090, 3252
Bso31I GGTCTC 3 cut(s) 763, 1964, 2999
Bsp120I GGGCCC 1 cut(s) 588
Bsp1286I GDGCHC 7 cut(s) 592, 1307, 1492, 2527, 2588, 2812, 3162
Bsp13I TCCGGA 1 cut(s) 3190
Bsp1407I TGTACA 1 cut(s) 2263
Bsp19I CCATGG 1 cut(s) 324
BspACI CCGC 7 cut(s) 43, 835, 939, 1577, 1901, 3176, 3314
BspANI GGCC 8 cut(s) 431, 590, 722, 780, 2192, 2420, 3090, 3252
BspEI TCCGGA 1 cut(s) 3190
BspFNI CGCG 2 cut(s) 150, 835
BspHI TCATGA 4 cut(s) 733, 1402, 2997, 3282
BspLI GGNNCC 7 cut(s) 589, 590, 786, 839, 1481, 2119, 2508
BspMAI CTGCAG 1 cut(s) 597
BspOI GCTAGC 2 cut(s) 263, 2625
BspPI GGATC 8 cut(s) 180, 232, 948, 1326, 1560, 2278, 2417, 2859
BspTNI GGTCTC 3 cut(s) 763, 1964, 2999
BsrDI GCAATG 4 cut(s) 288, 419, 475, 2959
BsrFI RCCGGY 1 cut(s) 701
BsrGI TGTACA 1 cut(s) 2263
BsrI ACTGG 9 cut(s) 551, 1053, 1845, 1960, 2209, 2359, 2599, 2812, 3276
BssAI RCCGGY 1 cut(s) 701
BssSI CACGAG 3 cut(s) 1414, 2000, 3257
BssT1I CCWWGG 7 cut(s) 182, 324, 433, 1284, 1542, 1697, 2113
Bst2BI CACGAG 3 cut(s) 1414, 2000, 3257
Bst2UI CCWGG 5 cut(s) 777, 782, 1485, 2195, 2885
Bst4CI ACNGT 9 cut(s) 56, 82, 299, 878, 1774, 1888, 2218, 2579, 3392
Bst6I CTCTTC 3 cut(s) 2429, 2675, 2985
BstAPI GCANNNNNTGC 1 cut(s) 640
BstAUI TGTACA 1 cut(s) 2263
BstDSI CCRYGG 2 cut(s) 324, 3339
BstFNI CGCG 2 cut(s) 150, 835
BstH2I RGCGCY 1 cut(s) 2659
BstHHI GCGC 3 cut(s) 150, 1242, 2658
BstMAI GTCTC 7 cut(s) 763, 1081, 1363, 1964, 2148, 2999, 3285
BstMWI GCNNNNNNNGC 9 cut(s) 241, 410, 556, 587, 617, 640, 2791, 3157, 3320
BstNI CCWGG 5 cut(s) 777, 782, 1485, 2195, 2885
BstNSI RCATGY 4 cut(s) 101, 1552, 1834, 3176
BstPAI GACNNNNGTC 2 cut(s) 326, 2115
BstSCI CCNGG 7 cut(s) 775, 780, 1483, 2193, 2234, 2883, 3380
BstSFI CTRYAG 1 cut(s) 593
BstSLI GKGCMC 2 cut(s) 592, 2812
BstUI CGCG 2 cut(s) 150, 835
BstV2I GAAGAC 1 cut(s) 2219
BstX2I RGATCY 3 cut(s) 953, 1318, 2851
BstXI CCANNNNNNTGG 1 cut(s) 3215
BstYI RGATCY 3 cut(s) 953, 1318, 2851
Bsu36I CCTNAGG 1 cut(s) 825
BsuI GTATCC 2 cut(s) 2506, 2975
BsuRI GGCC 8 cut(s) 431, 590, 722, 780, 2192, 2420, 3090, 3252
BtgI CCRYGG 2 cut(s) 324, 3339
BtgZI GCGATG 1 cut(s) 2354
BtsI GCAGTG 5 cut(s) 201, 399, 1572, 1854, 2536
CaiI CAGNNNCTG 2 cut(s) 2594, 2797
CciI TCATGA 4 cut(s) 733, 1402, 2997, 3282
CfoI GCGC 3 cut(s) 150, 1242, 2658
Cfr10I RCCGGY 1 cut(s) 701
CseI GACGC 1 cut(s) 1481
Csp6I GTAC 7 cut(s) 1429, 1455, 2264, 2301, 2468, 2766, 2915
CspAI ACCGGT 1 cut(s) 701
CviQI GTAC 7 cut(s) 1429, 1455, 2264, 2301, 2468, 2766, 2915
DraIII CACNNNGTG 1 cut(s) 936
Eam1104I CTCTTC 3 cut(s) 2429, 2675, 2985
EarI CTCTTC 3 cut(s) 2429, 2675, 2985
Ecl136II GAGCTC 1 cut(s) 3160
Eco130I CCWWGG 7 cut(s) 182, 324, 433, 1284, 1542, 1697, 2113
Eco24I GRGCYC 5 cut(s) 592, 1307, 1492, 2588, 3162
Eco31I GGTCTC 3 cut(s) 763, 1964, 2999
Eco32I GATATC 1 cut(s) 2200
Eco47I GGWCC 6 cut(s) 679, 859, 1864, 2117, 2881, 3369
Eco47III AGCGCT 1 cut(s) 2657
Eco53kI GAGCTC 1 cut(s) 3160
Eco57I CTGAAG 1 cut(s) 2453
Eco81I CCTNAGG 1 cut(s) 825
EcoICRI GAGCTC 1 cut(s) 3160
EcoO109I RGGNCCY 4 cut(s) 430, 588, 589, 3369
EcoRII CCWGG 5 cut(s) 775, 780, 1483, 2193, 2883
EcoRV GATATC 1 cut(s) 2200
EcoT14I CCWWGG 7 cut(s) 182, 324, 433, 1284, 1542, 1697, 2113
EcoT22I ATGCAT 1 cut(s) 1756
EcoT38I GRGCYC 5 cut(s) 592, 1307, 1492, 2588, 3162
ErhI CCWWGG 7 cut(s) 182, 324, 433, 1284, 1542, 1697, 2113
FalI AAGNNNNNCTT 4 cut(s) 2904, 2936, 3311, 3343
FaqI GGGAC 4 cut(s) 326, 368, 554, 2103
FauI CCCGC 2 cut(s) 3169, 3307
FauNDI CATATG 1 cut(s) 1434
FbaI TGATCA 2 cut(s) 534, 742
FblI GTMKAC 2 cut(s) 3268, 3394
FriOI GRGCYC 5 cut(s) 592, 1307, 1492, 2588, 3162
FspI TGCGCA 1 cut(s) 1241
GlaI GCGC 3 cut(s) 149, 1241, 2657
GsaI CCCAGC 2 cut(s) 21, 588
GsuI CTGGAG 1 cut(s) 803
HaeII RGCGCY 1 cut(s) 2659
HaeIII GGCC 8 cut(s) 431, 590, 722, 780, 2192, 2420, 3090, 3252
HapII CCGG 5 cut(s) 702, 2236, 3084, 3191, 3382
HgaI GACGC 1 cut(s) 1481
HhaI GCGC 3 cut(s) 150, 1242, 2658
Hin6I GCGC 3 cut(s) 148, 1240, 2656
HinP1I GCGC 3 cut(s) 148, 1240, 2656
HincII GTYRAC 4 cut(s) 874, 1030, 1953, 2352
HindII GTYRAC 4 cut(s) 874, 1030, 1953, 2352
HindIII AAGCTT 3 cut(s) 914, 1805, 2445
HpaI GTTAAC 3 cut(s) 1030, 1953, 2352
HpaII CCGG 5 cut(s) 702, 2236, 3084, 3191, 3382
HphI GGTGA 9 cut(s) 691, 727, 904, 1514, 1628, 2038, 2224, 2258, 3286
Hpy166II GTNNAC 9 cut(s) 874, 1030, 1783, 1953, 2232, 2352, 2901, 3269, 3395
Hpy8I GTNNAC 9 cut(s) 874, 1030, 1783, 1953, 2232, 2352, 2901, 3269, 3395
HpyAV CCTTC 8 cut(s) 162, 889, 1615, 1696, 1820, 2237, 3188, 3337
HpyCH4III ACNGT 9 cut(s) 56, 82, 299, 878, 1774, 1888, 2218, 2579, 3392
HpyF10VI GCNNNNNNNGC 9 cut(s) 241, 410, 556, 587, 617, 640, 2791, 3157, 3320
HspAI GCGC 3 cut(s) 148, 1240, 2656
Kpn2I TCCGGA 1 cut(s) 3190
Ksp22I TGATCA 2 cut(s) 534, 742
KspAI GTTAAC 3 cut(s) 1030, 1953, 2352
LmnI GCTCC 5 cut(s) 651, 784, 1337, 1689, 3157
LweI GCATC 6 cut(s) 76, 242, 1013, 1267, 1708, 2971
MaeIII GTNAC 9 cut(s) 196, 520, 1269, 1296, 1388, 1811, 1849, 2108, 2590
MfeI CAATTG 3 cut(s) 621, 1977, 2259
MflI RGATCY 3 cut(s) 953, 1318, 2851
MhlI GDGCHC 7 cut(s) 592, 1307, 1492, 2527, 2588, 2812, 3162
MlyI GAGTC 4 cut(s) 17, 122, 2446, 2840
MmeI TCCRAC 5 cut(s) 145, 1188, 1613, 1910, 2019
Mph1103I ATGCAT 1 cut(s) 1756
MroI TCCGGA 1 cut(s) 3190
MroXI GAANNNNTTC 3 cut(s) 278, 1754, 2505
MseI TTAA 8 cut(s) 1029, 1923, 1952, 2351, 2472, 2706, 2946, 3069
MslI CAYNNNNRTG 6 cut(s) 250, 738, 2597, 2805, 3177, 3338
MspA1I CMGCKG 2 cut(s) 1526, 2617
MspI CCGG 5 cut(s) 702, 2236, 3084, 3191, 3382
MspR9I CCNGG 7 cut(s) 777, 782, 1485, 2195, 2236, 2885, 3382
MunI CAATTG 3 cut(s) 621, 1977, 2259
Mva1269I GAATGC 6 cut(s) 310, 1644, 1754, 1756, 2143, 2552
MvaI CCWGG 5 cut(s) 777, 782, 1485, 2195, 2885
MvnI CGCG 2 cut(s) 150, 835
MwoI GCNNNNNNNGC 9 cut(s) 241, 410, 556, 587, 617, 640, 2791, 3157, 3320
NciI CCSGG 2 cut(s) 2236, 3382
NcoI CCATGG 1 cut(s) 324
NdeI CATATG 1 cut(s) 1434
NheI GCTAGC 2 cut(s) 259, 2621
NlaIV GGNNCC 7 cut(s) 589, 590, 786, 839, 1481, 2119, 2508
NmuCI GTSAC 7 cut(s) 196, 1296, 1388, 1811, 1849, 2108, 2590
NsbI TGCGCA 1 cut(s) 1241
NsiI ATGCAT 1 cut(s) 1756
NspI RCATGY 4 cut(s) 101, 1552, 1834, 3176
OliI CACNNNNGTG 1 cut(s) 2597
PaeI GCATGC 2 cut(s) 101, 1834
PagI TCATGA 4 cut(s) 733, 1402, 2997, 3282
PasI CCCWGGG 1 cut(s) 1484
PctI GAATGC 6 cut(s) 310, 1644, 1754, 1756, 2143, 2552
PdmI GAANNNNTTC 3 cut(s) 278, 1754, 2505
PflMI CCANNNNNTGG 2 cut(s) 350, 2297
PinAI ACCGGT 1 cut(s) 701
PleI GAGTC 4 cut(s) 17, 121, 2445, 2840
PpsI GAGTC 4 cut(s) 17, 121, 2445, 2840
PpuMI RGGWCCY 1 cut(s) 3369
PshAI GACNNNNGTC 2 cut(s) 326, 2115
PshBI ATTAAT 1 cut(s) 3069
Psp124BI GAGCTC 1 cut(s) 3162
Psp5II RGGWCCY 1 cut(s) 3369
Psp6I CCWGG 5 cut(s) 775, 780, 1483, 2193, 2883
PspFI CCCAGC 2 cut(s) 17, 584
PspGI CCWGG 5 cut(s) 775, 780, 1483, 2193, 2883
PspN4I GGNNCC 7 cut(s) 589, 590, 786, 839, 1481, 2119, 2508
PspOMI GGGCCC 1 cut(s) 588
PspPPI RGGWCCY 1 cut(s) 3369
PstI CTGCAG 1 cut(s) 597
PstNI CAGNNNCTG 2 cut(s) 2594, 2797
PsuI RGATCY 3 cut(s) 953, 1318, 2851
PvuII CAGCTG 2 cut(s) 1526, 2617
RsaI GTAC 7 cut(s) 1430, 1456, 2265, 2302, 2469, 2767, 2916
RsaNI GTAC 7 cut(s) 1429, 1455, 2264, 2301, 2468, 2766, 2915
RseI CAYNNNNRTG 6 cut(s) 250, 738, 2597, 2805, 3177, 3338
SacI GAGCTC 1 cut(s) 3162
SaqAI TTAA 8 cut(s) 1029, 1923, 1952, 2351, 2472, 2706, 2946, 3069
ScaI AGTACT 1 cut(s) 2916
SchI GAGTC 4 cut(s) 17, 122, 2446, 2840
ScrFI CCNGG 7 cut(s) 777, 782, 1485, 2195, 2236, 2885, 3382
SduI GDGCHC 7 cut(s) 592, 1307, 1492, 2527, 2588, 2812, 3162
SfaNI GCATC 6 cut(s) 76, 242, 1013, 1267, 1708, 2971
SfcI CTRYAG 1 cut(s) 593
SinI GGWCC 6 cut(s) 679, 859, 1864, 2117, 2881, 3369
SmiMI CAYNNNNRTG 6 cut(s) 250, 738, 2597, 2805, 3177, 3338
SmlI CTYRAG 1 cut(s) 1170
SmoI CTYRAG 1 cut(s) 1170
SpeI ACTAGT 1 cut(s) 2804
SphI GCATGC 2 cut(s) 101, 1834
SsiI CCGC 7 cut(s) 43, 835, 939, 1577, 1901, 3176, 3314
SspI AATATT 2 cut(s) 1312, 2295
SstI GAGCTC 1 cut(s) 3162
StyD4I CCNGG 7 cut(s) 775, 780, 1483, 2193, 2234, 2883, 3380
StyI CCWWGG 7 cut(s) 182, 324, 433, 1284, 1542, 1697, 2113
TaaI ACNGT 9 cut(s) 56, 82, 299, 878, 1774, 1888, 2218, 2579, 3392
TaqI TCGA 6 cut(s) 137, 517, 546, 1564, 1588, 2687
TatI WGTACW 3 cut(s) 2263, 2467, 2914
TauI GCSGC 1 cut(s) 1580
Tru1I TTAA 8 cut(s) 1029, 1923, 1952, 2351, 2472, 2706, 2946, 3069
Tru9I TTAA 8 cut(s) 1029, 1923, 1952, 2351, 2472, 2706, 2946, 3069
TseFI GTSAC 7 cut(s) 196, 1296, 1388, 1811, 1849, 2108, 2590
Tsp45I GTSAC 7 cut(s) 196, 1296, 1388, 1811, 1849, 2108, 2590
TspGWI ACGGA 5 cut(s) 1472, 1856, 3127, 3303, 3328
Van91I CCANNNNNTGG 2 cut(s) 350, 2297
VpaK11BI GGWCC 6 cut(s) 679, 859, 1864, 2117, 2881, 3369
VspI ATTAAT 1 cut(s) 3069
XapI RAATTY 4 cut(s) 728, 1584, 1941, 2309
XbaI TCTAGA 1 cut(s) 47
XceI RCATGY 4 cut(s) 101, 1552, 1834, 3176
XcmI CCANNNNNNNNNTGG 1 cut(s) 2201
XmaJI CCTAGG 1 cut(s) 182
XmiI GTMKAC 2 cut(s) 3268, 3394
XmnI GAANNNNTTC 3 cut(s) 278, 1754, 2505
ZrmI AGTACT 1 cut(s) 2916
Zsp2I ATGCAT 1 cut(s) 1756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.