Prupe.6G310100_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0018505
Physical Location & Seq
Reverse (-)
27826927 .. 27829804
2878 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G310100.1

Sequence Viewer

Length: 2391 bp
ATGAGTTTGGCTAAATTAAAGCCTCTGACTTTAGCTGCAAAATCCACTTTGAATCACAAACCCATGTCCAAAACAACCATAAATTTGTCAATTTTAGAGACCCATTTGCCCAAATGCCAAAATCTCAAGCAATTCAATCCCATACTCTCTCAGATGATCCTCACTGGCTTCATCAGGGACACATATGCTGCAAGTAGAATTCTCAAGTTCTCCACCGACTCTTCCTTCATTCACATTGATTTGTCCCTGAGAATTTTCAATCTGATTGAGGACGCAAATGGGTTCATTTGGAACACTATGATGAGAGCTTATATACAAAGAAACTGCCCTCAAAAGGCTTTAAATTTATACAAACTGATGGTGGATAAGAATGCGGAGCCTGATAATTACACTTACCCACTTTTGGTTCAAGCGTGCGCTATCCGGGTATCAGAGTTTGAAGGAAGACAGATACATAATCACATTTTGAAGACCGGTTTTGATTCAGATGTTTATGTTCAGAACACATTGATCAATATCTATGCTGTTTGTGAGAATATGAGTGATGCCCGGAACTTGTTTGATGAAATTCCTGTTTTAAATCCAGTGTCTTGGAATTCGATTTTGGCAGGGTATGTTAGGGCTGGGGATGCGGAGAAGGCAAAGCTTATATATGATCGGATGCCTGAGAGGAACACAATTGCTTCGAATTCTATGATTGTGTTGTTTGGTAGGACAGGTTGTGTAACTGAGGCTTGTCGATTGTTTAATGAACTGCCCGAGAAAGATATGGTTTCCTGGAGCGCATTGATTTCTTGTTATGAGCAAAATGAGATGTATGAGGAGGCTTTAGCTCTGTTTCTGAGAATGGTTGCTAATGGAGTTATGGTGGATGAGGTTGTGGTGGTCACTGTTCTTTCTGCATGTGCACGCTTATCAATTGTCCATACAGGGAAATTGATCCATGGGCTAGTTGTGAAAATTGGAATTGAAGCTTATGTTAATCTTCAAAATGCCTTTATTCACATGTATTCAAGTTGTGGGGAAATTATGGCTGCCCAAAAACTGTTCAATGCAGCCTACCACTTGGATCAGATATCCTGGAACTCGATGATATCAGGGTACTTGAAATGTGGTTTAGTTGAAAAGGCTAGGACATTATTTGATTCCATGCCCAAGAAGGATATCGTGTCGTGGAGTGCAATGATATCAGGTTATGCTCAACATGACCGCTTCTCAGAAACTTTGGCATTGTTTCAGGAGATGCAGCTTCGTGGAATCAGGCCTGATGAGACCACTTTGGTGAGTGTTGTCTCGGCTTGCACTCATTTGGCTGCCCTTGATCTCGGCCAATGGATTCATGCTTATATAAGGAAAAATGGCCTTAAGATTAATGTATTTTTGGGAACAACCCTTATAAACATGTACATGAAATGTGGGTGTGTGGAAAACGCATTGGAGGTTTTCCAGGGGACTGCAGAAAAGGGAGTTTCTACTTGGAATGCTCTTATTCTTGGGTTGGCAATGAACGGGTTGGTGGAGAAGTCACTTGAAATGTTTTCAGAGATGAAAAAATGTGGCGTGGCACCTAATGAGATAACCTTTATTGGAGTTCTCGGGGCTTGTCGACACATGGGCTTAGTCGATGAGGGGCGCCGCCATTTTGATTCCATTGTCCAGGAACACAAGATAGAACCCAACGTTAAGCATTACGGTTGCATGGTTGATCTTCTGGGGCGTGCTGGTATGCTCAAGGAGGCAGAAGAACTCATTGAGAGTATGCCAATGACACCAGATGTTGCTACTTGGGGTGCCTTACTAGGGGCCTGTAAGAAACACGGGGACCACGATATGGGAGAGAGGATAGGAAGAAAGCTCATTGAGCTTGATCCTGACCATGATGGGTTCCATGTATTGTTGTCGAATATATACGCTTCAAAAGGTAACTGGGATGATGTTCATGAGATTAGGGAAATAATGGTGCAACATGGGGTGGTAAAGATGCCAGGTTGTAGCATGATTGAAGCAAATGGAATAGTTCATGAGTTTTTAGCAGGAGATAACAAACACCCTCAAATAGAGGAGATTGAGAAGAAGCTAGATGAAATGGCTAAGAAACTGAAGATGGAAGGTTATGCACCAGATACGAATGAGGTTTCATTTGACATTGATGAAGAAGAGAAGGAAACTGCTCTTTTCAGACATAGTGAGAAACTCGCTATTGCCTTTGGGCTTATCTGTACAAGTCCGCCAACACCAATAAGAATAATAAAGAATTTGCGAATATGCAATGATTGTCACATGGCAGCAAAGTTCATCTCGAAAGCTTTCAATCGAGACATTGTGCTGAGGGATCGGCACCGGTTTCACCACTTTAAGCAAGGATCTTGTTCTTGCAAGGATTATTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

797

Amino Acids

89.67

Weight (kDa)

6.31

Isoelectric Point (pI)

41.67

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0018505)

Species Orthologous Gene IDs
malus_domestica MD04G1191500.v1.1
prunus_persica Prupe.6G310100_v2.0.a1
pyrus_communis pycom04g16910
rosa_chinensis RchiOBHm_Chr3g0457551
rosa_laevigata RLG00000025211
rosa_multiflora Rmu_sc0007404.1_g000005
rosa_roxburghii Rroxscaffold_6G00421740
rosa_rugosa Rorug03G0021300
rosa_samantha Rh3DG085600
rosa_wichuraiana Rw3G007030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1397
AccB1I GGYRCC 4 cut(s) 1564, 1632, 1790, 2337
AccB7I CCANNNNNTGG 1 cut(s) 1831
AccI GTMKAC 1 cut(s) 1606
AciI CCGC 5 cut(s) 374, 632, 1210, 1636, 2228
AclI AACGTT 1 cut(s) 1680
AclWI GGATC 6 cut(s) 151, 934, 1077, 1862, 2340, 2371
AcoI YGGCCR 1 cut(s) 1327
AcsI RAATTY 8 cut(s) 82, 198, 252, 343, 567, 595, 688, 2254
AcuI CTGAAG 1 cut(s) 2120
AcyI GRCGYC 1 cut(s) 1633
AfaI GTAC 3 cut(s) 1103, 1406, 2221
AfiI CCNNNNNNNGG 4 cut(s) 334, 403, 1800, 1831
AflII CTTAAG 1 cut(s) 1364
AflIII ACRYGT 2 cut(s) 1005, 1401
AgeI ACCGGT 2 cut(s) 473, 2340
AjnI CCWGG 5 cut(s) 776, 1079, 1446, 1656, 1984
AjuI GAANNNNNNNTTGG 2 cut(s) 587, 619
AleI CACNNNNGTG 1 cut(s) 1280
Alw21I GWGCWC 1 cut(s) 910
Alw26I GTCTC 4 cut(s) 92, 1265, 1297, 2310
Alw44I GTGCAC 1 cut(s) 906
AlwI GGATC 6 cut(s) 151, 934, 1077, 1862, 2340, 2371
Ama87I CYCGRG 2 cut(s) 758, 1595
AoxI GGCC 4 cut(s) 1262, 1327, 1360, 1803
ApaLI GTGCAC 1 cut(s) 906
ApeKI GCWGC 7 cut(s) 35, 188, 1034, 1055, 1246, 1313, 2285
ApoI RAATTY 8 cut(s) 82, 198, 252, 343, 567, 595, 688, 2254
AseI ATTAAT 1 cut(s) 1371
AsiGI ACCGGT 2 cut(s) 473, 2340
Asp700I GAANNNNTTC 1 cut(s) 2306
AspLEI GCGC 3 cut(s) 419, 785, 1635
AspS9I GGNCC 2 cut(s) 1803, 1822
AsuC2I CCSGG 2 cut(s) 425, 550
AsuHPI GGTGA 2 cut(s) 1294, 2339
AsuII TTCGAA 1 cut(s) 686
AvaI CYCGRG 2 cut(s) 758, 1595
AvaII GGWCC 1 cut(s) 1822
BaeGI GKGCMC 1 cut(s) 910
BanI GGYRCC 4 cut(s) 1564, 1632, 1790, 2337
BbsI GAAGAC 2 cut(s) 451, 476
Bbv12I GWGCWC 1 cut(s) 910
BbvCI CCTCAGC 1 cut(s) 2327
BbvI GCAGC 7 cut(s) 22, 175, 1021, 1067, 1258, 1300, 2297
BccI CCATC 3 cut(s) 352, 1874, 2098
BciT130I CCWGG 5 cut(s) 778, 1081, 1448, 1658, 1986
BclI TGATCA 1 cut(s) 510
BcnI CCSGG 2 cut(s) 425, 550
BcoDI GTCTC 4 cut(s) 92, 1265, 1297, 2310
BfaI CTAG 4 cut(s) 950, 1131, 1799, 2078
BfmI CTRYAG 1 cut(s) 1455
BfoI RGCGCY 1 cut(s) 1636
BfrI CTTAAG 1 cut(s) 1364
BisI GCNGC 8 cut(s) 36, 189, 1035, 1056, 1247, 1314, 1636, 2286
BlsI GCNGC 8 cut(s) 37, 190, 1036, 1057, 1248, 1315, 1637, 2287
Bme1390I CCNGG 7 cut(s) 425, 550, 778, 1081, 1448, 1658, 1986
Bme18I GGWCC 1 cut(s) 1822
BmeT110I CYCGRG 2 cut(s) 758, 1595
BmgT120I GGNCC 2 cut(s) 1803, 1822
BmiI GGNNCC 8 cut(s) 378, 1566, 1634, 1792, 1804, 1823, 1886, 2339
BmrFI CCNGG 7 cut(s) 425, 550, 778, 1081, 1448, 1658, 1986
BmrI ACTGGG 1 cut(s) 1936
BmsI GCATC 5 cut(s) 535, 619, 651, 1233, 1971
BmuI ACTGGG 1 cut(s) 1936
BpiI GAAGAC 2 cut(s) 451, 476
BpmI CTGGAG 1 cut(s) 799
Bpu10I CCTNAGC 1 cut(s) 2327
Bpu14I TTCGAA 1 cut(s) 686
BpuEI CTTGAG 3 cut(s) 110, 188, 1715
BpuMI CCSGG 2 cut(s) 425, 550
BsaBI GATNNNNATC 1 cut(s) 515
BsaHI GRCGYC 1 cut(s) 1633
BsaI GGTCTC 2 cut(s) 92, 1265
BsaJI CCNNGG 2 cut(s) 943, 1447
BsaWI WCCGGW 2 cut(s) 473, 2340
BsaXI ACNNNNNCTCC 2 cut(s) 852, 882
Bsc4I CCNNNNNNNGG 4 cut(s) 334, 403, 1800, 1831
Bse118I RCCGGY 2 cut(s) 473, 2340
Bse1I ACTGG 3 cut(s) 169, 584, 1931
Bse3DI GCAATG 3 cut(s) 1188, 1509, 2275
Bse8I GATNNNNATC 1 cut(s) 515
BseBI CCWGG 5 cut(s) 778, 1081, 1448, 1658, 1986
BseDI CCNNGG 2 cut(s) 943, 1447
BseGI GGATG 4 cut(s) 634, 666, 877, 1936
BseJI GATNNNNATC 1 cut(s) 515
BseLI CCNNNNNNNGG 4 cut(s) 334, 403, 1800, 1831
BseMI GCAATG 3 cut(s) 1188, 1509, 2275
BseMII CTCAG 7 cut(s) 164, 239, 657, 720, 833, 1230, 2318
BseNI ACTGG 3 cut(s) 169, 584, 1931
BseRI GAGGAG 2 cut(s) 836, 2075
BseSI GKGCMC 1 cut(s) 910
BseXI GCAGC 7 cut(s) 22, 175, 1021, 1067, 1258, 1300, 2297
BseYI CCCAGC 1 cut(s) 623
BshFI GGCC 4 cut(s) 1264, 1329, 1362, 1805
BshNI GGYRCC 4 cut(s) 1564, 1632, 1790, 2337
BshTI ACCGGT 2 cut(s) 473, 2340
BsiHKAI GWGCWC 1 cut(s) 910
BsiHKCI CYCGRG 2 cut(s) 758, 1595
BsiSI CCGG 4 cut(s) 424, 474, 550, 2341
BslFI GGGAC 4 cut(s) 191, 229, 1465, 1835
BslI CCNNNNNNNGG 4 cut(s) 334, 403, 1800, 1831
BsmAI GTCTC 4 cut(s) 92, 1265, 1297, 2310
BsmFI GGGAC 4 cut(s) 191, 229, 1465, 1835
BsmI GAATGC 2 cut(s) 376, 1486
BsnI GGCC 4 cut(s) 1264, 1329, 1362, 1805
Bso31I GGTCTC 2 cut(s) 92, 1265
BsoBI CYCGRG 2 cut(s) 758, 1595
Bsp119I TTCGAA 1 cut(s) 686
Bsp1286I GDGCHC 1 cut(s) 910
Bsp1407I TGTACA 2 cut(s) 1404, 2219
Bsp19I CCATGG 1 cut(s) 943
BspACI CCGC 5 cut(s) 374, 632, 1210, 1636, 2228
BspANI GGCC 4 cut(s) 1264, 1329, 1362, 1805
BspCNI CTCAG 7 cut(s) 163, 240, 658, 721, 834, 1229, 2319
BspHI TCATGA 2 cut(s) 1939, 2020
BspLI GGNNCC 8 cut(s) 378, 1566, 1634, 1792, 1804, 1823, 1886, 2339
BspMAI CTGCAG 1 cut(s) 1459
BspPI GGATC 6 cut(s) 151, 934, 1077, 1862, 2340, 2371
BspT104I TTCGAA 1 cut(s) 686
BspT107I GGYRCC 4 cut(s) 1564, 1632, 1790, 2337
BspTI CTTAAG 1 cut(s) 1364
BspTNI GGTCTC 2 cut(s) 92, 1265
BsrDI GCAATG 3 cut(s) 1188, 1509, 2275
BsrFI RCCGGY 2 cut(s) 473, 2340
BsrGI TGTACA 2 cut(s) 1404, 2219
BsrI ACTGG 3 cut(s) 169, 584, 1931
BssAI RCCGGY 2 cut(s) 473, 2340
BssECI CCNNGG 2 cut(s) 943, 1447
BssNI GRCGYC 1 cut(s) 1633
BssT1I CCWWGG 1 cut(s) 943
Bst2UI CCWGG 5 cut(s) 778, 1081, 1448, 1658, 1986
Bst4CI ACNGT 3 cut(s) 892, 1047, 1694
Bst6I CTCTTC 2 cut(s) 226, 2151
BstACI GRCGYC 1 cut(s) 1633
BstAFI CTTAAG 1 cut(s) 1364
BstAUI TGTACA 2 cut(s) 1404, 2219
BstBI TTCGAA 1 cut(s) 686
BstC8I GCNNGC 4 cut(s) 415, 910, 1300, 1719
BstDEI CTNAG 9 cut(s) 150, 248, 666, 729, 842, 1216, 1618, 2091, 2327
BstDSI CCRYGG 1 cut(s) 943
BstF5I GGATG 4 cut(s) 634, 666, 877, 1936
BstH2I RGCGCY 1 cut(s) 1636
BstHHI GCGC 3 cut(s) 419, 785, 1635
BstMAI GTCTC 4 cut(s) 92, 1265, 1297, 2310
BstMWI GCNNNNNNNGC 3 cut(s) 629, 638, 1861
BstNI CCWGG 5 cut(s) 778, 1081, 1448, 1658, 1986
BstNSI RCATGY 3 cut(s) 906, 1009, 1405
BstSCI CCNGG 7 cut(s) 423, 548, 776, 1079, 1446, 1656, 1984
BstSFI CTRYAG 1 cut(s) 1455
BstSLI GKGCMC 1 cut(s) 910
BstV1I GCAGC 7 cut(s) 22, 175, 1021, 1067, 1258, 1300, 2297
BstV2I GAAGAC 2 cut(s) 451, 476
BstX2I RGATCY 1 cut(s) 2363
BstXI CCANNNNNNTGG 1 cut(s) 591
BstYI RGATCY 1 cut(s) 2363
BsuRI GGCC 4 cut(s) 1264, 1329, 1362, 1805
BtgI CCRYGG 1 cut(s) 943
BtsCI GGATG 4 cut(s) 634, 666, 877, 1936
BtsIMutI CAGTG 3 cut(s) 162, 591, 888
Cac8I GCNNGC 4 cut(s) 415, 910, 1300, 1719
CciI TCATGA 2 cut(s) 1939, 2020
CfoI GCGC 3 cut(s) 419, 785, 1635
Cfr10I RCCGGY 2 cut(s) 473, 2340
Cfr13I GGNCC 2 cut(s) 1803, 1822
CseI GACGC 1 cut(s) 281
Csp6I GTAC 3 cut(s) 1102, 1405, 2220
CspAI ACCGGT 2 cut(s) 473, 2340
CviQI GTAC 3 cut(s) 1102, 1405, 2220
DdeI CTNAG 9 cut(s) 150, 248, 666, 729, 842, 1216, 1618, 2091, 2327
DinI GGCGCC 1 cut(s) 1634
DraI TTTAAA 2 cut(s) 342, 579
EaeI YGGCCR 1 cut(s) 1327
Eam1104I CTCTTC 2 cut(s) 226, 2151
EarI CTCTTC 2 cut(s) 226, 2151
EciI GGCGGA 1 cut(s) 2217
Eco130I CCWWGG 1 cut(s) 943
Eco147I AGGCCT 1 cut(s) 1264
Eco31I GGTCTC 2 cut(s) 92, 1265
Eco32I GATATC 4 cut(s) 1077, 1095, 1165, 1188
Eco47I GGWCC 1 cut(s) 1822
Eco57I CTGAAG 1 cut(s) 2120
Eco88I CYCGRG 2 cut(s) 758, 1595
EcoO109I RGGNCCY 1 cut(s) 1803
EcoRI GAATTC 3 cut(s) 198, 595, 688
EcoRII CCWGG 5 cut(s) 776, 1079, 1446, 1656, 1984
EcoRV GATATC 4 cut(s) 1077, 1095, 1165, 1188
EcoT14I CCWWGG 1 cut(s) 943
EgeI GGCGCC 1 cut(s) 1634
EheI GGCGCC 1 cut(s) 1634
ErhI CCWWGG 1 cut(s) 943
FaqI GGGAC 4 cut(s) 191, 229, 1465, 1835
FauNDI CATATG 1 cut(s) 184
FbaI TGATCA 1 cut(s) 510
FblI GTMKAC 1 cut(s) 1606
Fnu4HI GCNGC 8 cut(s) 36, 189, 1035, 1056, 1247, 1314, 1636, 2286
FokI GGATG 4 cut(s) 641, 673, 884, 1943
Fsp4HI GCNGC 8 cut(s) 36, 189, 1035, 1056, 1247, 1314, 1636, 2286
FspBI CTAG 4 cut(s) 950, 1131, 1799, 2078
GlaI GCGC 3 cut(s) 418, 784, 1634
GluI GCNGC 8 cut(s) 36, 189, 1035, 1056, 1247, 1314, 1636, 2286
GsaI CCCAGC 1 cut(s) 627
GsuI CTGGAG 1 cut(s) 799
HaeII RGCGCY 1 cut(s) 1636
HaeIII GGCC 4 cut(s) 1264, 1329, 1362, 1805
HapII CCGG 4 cut(s) 424, 474, 550, 2341
HgaI GACGC 1 cut(s) 281
HhaI GCGC 3 cut(s) 419, 785, 1635
Hin1I GRCGYC 1 cut(s) 1633
Hin6I GCGC 3 cut(s) 417, 783, 1633
HinP1I GCGC 3 cut(s) 417, 783, 1633
HincII GTYRAC 1 cut(s) 1607
HindII GTYRAC 1 cut(s) 1607
HindIII AAGCTT 3 cut(s) 644, 972, 2304
HinfI GANTC 7 cut(s) 52, 218, 482, 1145, 1257, 1336, 1646
HpaII CCGG 4 cut(s) 424, 474, 550, 2341
HphI GGTGA 2 cut(s) 1294, 2339
Hpy166II GTNNAC 2 cut(s) 908, 1607
Hpy188III TCNNGA 6 cut(s) 1238, 1871, 1940, 2021, 2299, 2315
Hpy8I GTNNAC 2 cut(s) 908, 1607
HpyAV CCTTC 6 cut(s) 235, 434, 631, 1153, 2102, 2155
HpyCH4III ACNGT 3 cut(s) 892, 1047, 1694
HpyCH4IV ACGT 1 cut(s) 1680
HpyF10VI GCNNNNNNNGC 3 cut(s) 629, 638, 1861
HpyF3I CTNAG 9 cut(s) 150, 248, 666, 729, 842, 1216, 1618, 2091, 2327
HpySE526I ACGT 1 cut(s) 1680
Hsp92I GRCGYC 1 cut(s) 1633
HspAI GCGC 3 cut(s) 417, 783, 1633
KasI GGCGCC 1 cut(s) 1632
Ksp22I TGATCA 1 cut(s) 510
LmnI GCTCC 2 cut(s) 376, 780
Lsp1109I GCAGC 7 cut(s) 22, 175, 1021, 1067, 1258, 1300, 2297
LweI GCATC 5 cut(s) 535, 619, 651, 1233, 1971
MaeI CTAG 4 cut(s) 950, 1131, 1799, 2078
MaeII ACGT 1 cut(s) 1680
MaeIII GTNAC 5 cut(s) 724, 886, 1524, 1922, 2276
MfeI CAATTG 2 cut(s) 678, 918
MflI RGATCY 1 cut(s) 2363
MhlI GDGCHC 1 cut(s) 910
Mly113I GGCGCC 1 cut(s) 1633
MlyI GAGTC 1 cut(s) 212
MroXI GAANNNNTTC 1 cut(s) 2306
MseI TTAA 9 cut(s) 17, 341, 578, 747, 981, 1365, 1371, 1683, 2355
MslI CAYNNNNRTG 3 cut(s) 299, 1280, 1406
MspCI CTTAAG 1 cut(s) 1364
MspI CCGG 4 cut(s) 424, 474, 550, 2341
MspR9I CCNGG 7 cut(s) 425, 550, 778, 1081, 1448, 1658, 1986
MunI CAATTG 2 cut(s) 678, 918
Mva1269I GAATGC 2 cut(s) 376, 1486
MvaI CCWGG 5 cut(s) 778, 1081, 1448, 1658, 1986
MwoI GCNNNNNNNGC 3 cut(s) 629, 638, 1861
NarI GGCGCC 1 cut(s) 1633
NciI CCSGG 2 cut(s) 425, 550
NcoI CCATGG 1 cut(s) 943
NdeI CATATG 1 cut(s) 184
NlaIV GGNNCC 8 cut(s) 378, 1566, 1634, 1792, 1804, 1823, 1886, 2339
NmeAIII GCCGAG 2 cut(s) 1274, 1305
NmuCI GTSAC 3 cut(s) 886, 1524, 2276
NspI RCATGY 3 cut(s) 906, 1009, 1405
NspV TTCGAA 1 cut(s) 686
OliI CACNNNNGTG 1 cut(s) 1280
PagI TCATGA 2 cut(s) 1939, 2020
PceI AGGCCT 1 cut(s) 1264
PciI ACATGT 2 cut(s) 1005, 1401
PcsI WCGNNNNNNNCGW 1 cut(s) 1824
PctI GAATGC 2 cut(s) 376, 1486
PdmI GAANNNNTTC 1 cut(s) 2306
PfeI GAWTC 6 cut(s) 52, 482, 1145, 1257, 1336, 1646
PflMI CCANNNNNTGG 1 cut(s) 1831
PfoI TCCNGGA 3 cut(s) 776, 1079, 1656
PinAI ACCGGT 2 cut(s) 473, 2340
PkrI GCNGC 8 cut(s) 37, 190, 1036, 1057, 1248, 1315, 1637, 2287
PleI GAGTC 1 cut(s) 212
PluTI GGCGCC 1 cut(s) 1636
PpsI GAGTC 1 cut(s) 212
PscI ACATGT 2 cut(s) 1005, 1401
PshBI ATTAAT 1 cut(s) 1371
PsiI TTATAA 1 cut(s) 1397
Psp1406I AACGTT 1 cut(s) 1680
Psp6I CCWGG 5 cut(s) 776, 1079, 1446, 1656, 1984
PspFI CCCAGC 1 cut(s) 623
PspGI CCWGG 5 cut(s) 776, 1079, 1446, 1656, 1984
PspN4I GGNNCC 8 cut(s) 378, 1566, 1634, 1792, 1804, 1823, 1886, 2339
PspPI GGNCC 2 cut(s) 1803, 1822
PstI CTGCAG 1 cut(s) 1459
PsuI RGATCY 1 cut(s) 2363
RsaI GTAC 3 cut(s) 1103, 1406, 2221
RsaNI GTAC 3 cut(s) 1102, 1405, 2220
RseI CAYNNNNRTG 3 cut(s) 299, 1280, 1406
SalI GTCGAC 1 cut(s) 1605
SaqAI TTAA 9 cut(s) 17, 341, 578, 747, 981, 1365, 1371, 1683, 2355
SatI GCNGC 8 cut(s) 36, 189, 1035, 1056, 1247, 1314, 1636, 2286
Sau96I GGNCC 2 cut(s) 1803, 1822
SchI GAGTC 1 cut(s) 212
ScrFI CCNGG 7 cut(s) 425, 550, 778, 1081, 1448, 1658, 1986
SduI GDGCHC 1 cut(s) 910
SfaNI GCATC 5 cut(s) 535, 619, 651, 1233, 1971
SfcI CTRYAG 1 cut(s) 1455
SfoI GGCGCC 1 cut(s) 1634
SfuI TTCGAA 1 cut(s) 686
SinI GGWCC 1 cut(s) 1822
SmiMI CAYNNNNRTG 3 cut(s) 299, 1280, 1406
SmlI CTYRAG 4 cut(s) 125, 203, 1364, 1730
SmoI CTYRAG 4 cut(s) 125, 203, 1364, 1730
SseBI AGGCCT 1 cut(s) 1264
SsiI CCGC 5 cut(s) 374, 632, 1210, 1636, 2228
SspDI GGCGCC 1 cut(s) 1632
SspMI CTAG 4 cut(s) 950, 1131, 1799, 2078
StuI AGGCCT 1 cut(s) 1264
StyD4I CCNGG 7 cut(s) 423, 548, 776, 1079, 1446, 1656, 1984
StyI CCWWGG 1 cut(s) 943
TaaI ACNGT 3 cut(s) 892, 1047, 1694
TaiI ACGT 1 cut(s) 1683
TaqI TCGA 9 cut(s) 599, 686, 739, 1088, 1606, 1623, 1901, 2300, 2314
TatI WGTACW 2 cut(s) 1404, 2219
TauI GCSGC 1 cut(s) 1638
TfiI GAWTC 6 cut(s) 52, 482, 1145, 1257, 1336, 1646
Tru1I TTAA 9 cut(s) 17, 341, 578, 747, 981, 1365, 1371, 1683, 2355
Tru9I TTAA 9 cut(s) 17, 341, 578, 747, 981, 1365, 1371, 1683, 2355
TscAI CASTG 3 cut(s) 169, 591, 895
TseFI GTSAC 3 cut(s) 886, 1524, 2276
TseI GCWGC 7 cut(s) 35, 188, 1034, 1055, 1246, 1313, 2285
Tsp45I GTSAC 3 cut(s) 886, 1524, 2276
TspRI CASTG 3 cut(s) 169, 591, 895
Van91I CCANNNNNTGG 1 cut(s) 1831
Vha464I CTTAAG 1 cut(s) 1364
VneI GTGCAC 1 cut(s) 906
VpaK11BI GGWCC 1 cut(s) 1822
VspI ATTAAT 1 cut(s) 1371
XapI RAATTY 8 cut(s) 82, 198, 252, 343, 567, 595, 688, 2254
XceI RCATGY 3 cut(s) 906, 1009, 1405
XmiI GTMKAC 1 cut(s) 1606
XmnI GAANNNNTTC 1 cut(s) 2306
XspI CTAG 4 cut(s) 950, 1131, 1799, 2078
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.