Rw3G007030

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0018505
Physical Location & Seq
Forward (+)
6552335 .. 6554698
2364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G007030.1

Sequence Viewer

Length: 2364 bp
ATGTCCTCTTCAAAGTTCAAACCTTTAGCTATGAACTTGGCTAGATTGACCATAAACTTGTCAATTTTAGAAACCCATTTGCCCAAATGCAAGAATCTCAAGCAGTTCAATCAAATACTATCTCAGATGATCCTCACTGGTTTCATTAGGGACACATATGCTGCAAGTAGAGTCCTCAAGTTCTCCACTGACTCTTCTTTCAGTGACATTGATTTGTCGTTTAGAATTTTCAAACACATTGAGAACTCAAATGGGTTCATTTGGAACACTATGATGAAAGCTTACATACAAAGAAACTGTCCCCAAAAGACTTTGGGTCTTTACAAATTGATGTTGGGTAAGAATGGGGATAGAGATCATTATACTTACCCAATTCTAGTTCAAGCTTGTGCTATGAGAGCATCAGAGTTTGAAGGGAAACAGATGCATAGTCATATTTTGAAGTTTGGGTTTGGTTCAGATGTGTATGTGCAGAACACATTGATCAACATGTACTCAGTTTGTGACAATATGAGGGATGCACGCAATGTGTTTGATGAAATGCCTGTGTTGGATTCGGTGGCGTGGAATTCGATATTGGCTGGCTATGTTAGGGTGGGGGATGTAAAGCAGGCTAAGTGTATATATGATCAGATGCCAGTGAGGAACACGATTGCTTCGAATTCTATGATTGTGTTGTTTGGTAAAAGAGGTTGTGTGACTGAGGCTCGGCATTTGTTTGATGAACTGCCTGAGAAGGATATGGTTTCGTGGAGCGCGTTGATTTCTTGTTTCGAGCAAAATGAGATGTATGAGGAGGCTTTGGATATGTTTGTGAAAATGGTTGCTAATGGAGTTATGGTGGATGAGGTTGTGGTGGTTAGTGTGCTTTCAGCATGTGCACATTTGTCAGCTGTTCACACAGGGAAGTTGATCCATGGGTTAGTTGTGAAAATTGGAATTGAAAGTTATGTTAATCTTCAAAATGCTTTTATTCATATGTATTCCAGTTGTGGGGAGATAATGGTTGCCGAGAAACTGTTCAATGCAGCCTACAACCTGGATCAGATATCTTGGAACTCAATGATATCGGGTTACTTGAGATGTGGTTTAGTTGAAGCTGCTAAGACATTATTTGATTCCATGCCTGAGAAGGATGTAGTGTCTTGGAGTGCAATGATATCAGGCTATGCTCAGCATGACTGGTTTTCAGAAACTTTGGCATTGTTCCAGGAGATGCAGCTGTGTGGAATTAGGCCCGATGAGACCACTTTGGTGAGCGTCATCTCGGCTTGCACTCATTTGGCTGCCCTTGACCTGGGCCAATGGATTCATGCTTATATAAGGAAAAATAGCCTTAAAGTTAATGTCTTTCTTGGGACAACCCTTATTAACATGTACTTGAAATGTGGGTGTGTGGAAAATGCATTGGAGGTTTTCGAGGAGACAGCAGAAAAGGGTGTTTCTACTTGGAATGCTCTTATTCTTGGGTTGGCAATGAATGGGTTGGTGGAGAAGTCGCTTGAAATGTTTGCAAAGATGAAGACAAGGGGTGTGACACCTAATGAAATAACCTTTATGGGAGTTATTGGAGCTTGTCGTCACATGGGCTTGGTAGATGAGGGCCGTCGCCACTTCGATTCCATGATGCAGGAACACAAGATAGAACCCAATGTTAAGCATTACGGATGCATGGTTGATCTTCTTGGACGTGCTGGTATGCTCAAGGAGGCAGAGGACCTCATTGAAAGTATGCCTATGACACCAGATGTTGCTACTTGGGGTGCCTTACTGGGGGCTTGTAAGAAACATGGGGACCATGACAGGGGTGAGAGGATAGGAAGAAAGCTCATTGAGCTCGATCCTAACCATGATGGGTTCCATGTGTTGTTGTCCAATATATGTGCTTCAAAAGGTGATTGGGATGGTGTTCATGAGATTAGGGGAATAATGATGCAACATGGGGTGGTAAAGACCCCAGGTTGTAGCATGATCGAAGCAGATGGTGTAGTTCATGAATTTCTGGCAGGAGACAAGAAACACCCTCGAATGAAAGAGATTGAGGTTATGCTAGATGAAATGGCTCAGAAATTGAAGAGGGAAGGTTATGCACCAGATACAAATGAGGTATCCTTTGACATTGATGAAGAGGAAAAGGAAACTGTTCTTTTCAGACACAGTGAGAAACTGGCAATTGCCTTTGGGCTAATCGCTATCAGTCCACCATCACCAATACGAATAATAAAGAATTTGCGAATATGTAATGATTGTCACATGGCAGCAAAGTTCGTCTCGAAAGCTTTTGGTCGTGACATTGTGGTGAGGGATAAGCACCGCTTTCACCACTTTAAGCAGGGATCTTGTTCCTGCAATGACTATTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

787

Amino Acids

88.61

Weight (kDa)

6.27

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 86 - 131 9.8e-07 PPR repeat family
PPR_2 PF13041 247 - 295 5.8e-06 PPR repeat family
PPR PF01535 249 - 279 2.1e-06 PPR repeat
PPR PF01535 350 - 379 1.2e-07 PPR repeat
PPR_2 PF13041 378 - 426 1.8e-08 PPR repeat family
PPR PF01535 381 - 411 1.6e-06 PPR repeat
PPR_2 PF13041 480 - 526 3.3e-10 PPR repeat family
PPR PF01535 482 - 512 1.2e-06 PPR repeat
E_motif PF20431 597 - 659 2.2e-13 E motif
Eplus_motif PF20430 664 - 691 5.1e-06 E+ motif
DYW_deaminase PF14432 695 - 787 2.7e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018505)

Species Orthologous Gene IDs
malus_domestica MD04G1191500.v1.1
prunus_persica Prupe.6G310100_v2.0.a1
pyrus_communis pycom04g16910
rosa_chinensis RchiOBHm_Chr3g0457551
rosa_laevigata RLG00000025211
rosa_multiflora Rmu_sc0007404.1_g000005
rosa_roxburghii Rroxscaffold_6G00421740
rosa_rugosa Rorug03G0021300
rosa_samantha Rh3DG085600
rosa_wichuraiana Rw3G007030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1763
AccII CGCG 1 cut(s) 758
AciI CCGC 1 cut(s) 2314
AclWI GGATC 5 cut(s) 124, 907, 1050, 1835, 2344
AcsI RAATTY 5 cut(s) 225, 568, 661, 1997, 2227
AfaI GTAC 2 cut(s) 494, 1379
AfiI CCNNNNNNNGG 4 cut(s) 993, 1297, 1773, 1804
AflIII ACRYGT 2 cut(s) 489, 1374
AhdI GACNNNNNGTC 1 cut(s) 315
AjiI CACGTC 1 cut(s) 1691
AjnI CCWGG 4 cut(s) 1038, 1209, 1296, 1957
AjuI GAANNNNNNNTTGG 2 cut(s) 560, 592
AleI CACNNNNGTG 1 cut(s) 1253
Alw21I GWGCWC 2 cut(s) 883, 1839
Alw26I GTCTC 4 cut(s) 1238, 1418, 2004, 2275
Alw44I GTGCAC 1 cut(s) 879
AlwI GGATC 5 cut(s) 124, 907, 1050, 1835, 2344
AoxI GGCC 3 cut(s) 1235, 1300, 1603
ApaLI GTGCAC 1 cut(s) 879
ApeKI GCWGC 6 cut(s) 161, 1028, 1100, 1219, 1286, 2258
ApoI RAATTY 5 cut(s) 225, 568, 661, 1997, 2227
ArsI GACNNNNNNTTYG 2 cut(s) 283, 315
Asp700I GAANNNNTTC 2 cut(s) 1019, 2142
AspLEI GCGC 1 cut(s) 758
AspS9I GGNCC 5 cut(s) 1236, 1300, 1603, 1717, 1795
AsuHPI GGTGA 6 cut(s) 1267, 1820, 1907, 2199, 2311, 2312
AsuII TTCGAA 1 cut(s) 659
AvaII GGWCC 2 cut(s) 1717, 1795
BaeGI GKGCMC 1 cut(s) 883
BanI GGYRCC 1 cut(s) 1763
BanII GRGCYC 1 cut(s) 1839
BbsI GAAGAC 1 cut(s) 1529
Bbv12I GWGCWC 2 cut(s) 883, 1839
BbvI GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
BccI CCATC 4 cut(s) 1847, 1898, 1976, 2212
BceAI ACGGC 1 cut(s) 1590
BciT130I CCWGG 4 cut(s) 1040, 1211, 1298, 1959
BciVI GTATCC 1 cut(s) 2119
BclI TGATCA 2 cut(s) 483, 628
BcoDI GTCTC 4 cut(s) 1238, 1418, 2004, 2275
BfaI CTAG 3 cut(s) 42, 377, 2051
BfuI GTATCC 1 cut(s) 2119
BisI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
BlpI GCTNAGC 1 cut(s) 1173
BlsI GCNGC 6 cut(s) 163, 1030, 1102, 1221, 1288, 2260
Bme1390I CCNGG 4 cut(s) 1040, 1211, 1298, 1959
Bme18I GGWCC 2 cut(s) 1717, 1795
BmeRI GACNNNNNGTC 1 cut(s) 315
BmgBI CACGTC 1 cut(s) 1691
BmgT120I GGNCC 5 cut(s) 1236, 1300, 1603, 1717, 1795
BmiI GGNNCC 3 cut(s) 1765, 1796, 1859
BmrFI CCNGG 4 cut(s) 1040, 1211, 1298, 1959
BmrI ACTGGG 1 cut(s) 1781
BmsI GCATC 8 cut(s) 410, 414, 508, 624, 1206, 1617, 1658, 1923
BmuI ACTGGG 1 cut(s) 1781
BpiI GAAGAC 1 cut(s) 1529
Bpu1102I GCTNAGC 1 cut(s) 1173
Bpu14I TTCGAA 1 cut(s) 659
BpuEI CTTGAG 4 cut(s) 83, 161, 1099, 1688
BsaBI GATNNNNATC 1 cut(s) 354
BsaI GGTCTC 1 cut(s) 1238
BsaJI CCNNGG 3 cut(s) 916, 1297, 1957
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 4 cut(s) 993, 1297, 1773, 1804
Bse1I ACTGG 6 cut(s) 142, 638, 987, 1187, 1776, 2172
Bse3DI GCAATG 4 cut(s) 532, 1161, 1482, 2356
Bse8I GATNNNNATC 1 cut(s) 354
BseBI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
BseDI CCNNGG 3 cut(s) 916, 1297, 1957
BseGI GGATG 6 cut(s) 523, 607, 850, 1141, 1673, 1909
BseJI GATNNNNATC 1 cut(s) 354
BseLI CCNNNNNNNGG 4 cut(s) 993, 1297, 1773, 1804
BseMI GCAATG 4 cut(s) 532, 1161, 1482, 2356
BseMII CTCAG 7 cut(s) 137, 510, 693, 723, 1119, 1187, 2078
BseNI ACTGG 6 cut(s) 142, 638, 987, 1187, 1776, 2172
BseRI GAGGAG 2 cut(s) 809, 1436
BseSI GKGCMC 1 cut(s) 883
BseXI GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
BsgI GTGCAG 1 cut(s) 491
Bsh1236I CGCG 1 cut(s) 758
BshFI GGCC 3 cut(s) 1237, 1302, 1605
BshNI GGYRCC 1 cut(s) 1763
BsiHKAI GWGCWC 2 cut(s) 883, 1839
BslFI GGGAC 4 cut(s) 164, 285, 1372, 1808
BslI CCNNNNNNNGG 4 cut(s) 993, 1297, 1773, 1804
BsmAI GTCTC 4 cut(s) 1238, 1418, 2004, 2275
BsmBI CGTCTC 1 cut(s) 2275
BsmFI GGGAC 4 cut(s) 164, 285, 1372, 1808
BsmI GAATGC 1 cut(s) 1459
BsnI GGCC 3 cut(s) 1237, 1302, 1605
Bso31I GGTCTC 1 cut(s) 1238
Bsp119I TTCGAA 1 cut(s) 659
Bsp1286I GDGCHC 2 cut(s) 883, 1839
Bsp1720I GCTNAGC 1 cut(s) 1173
Bsp19I CCATGG 1 cut(s) 916
BspACI CCGC 1 cut(s) 2314
BspANI GGCC 3 cut(s) 1237, 1302, 1605
BspCNI CTCAG 7 cut(s) 136, 509, 694, 724, 1120, 1186, 2077
BspFNI CGCG 1 cut(s) 758
BspHI TCATGA 2 cut(s) 1912, 1993
BspLI GGNNCC 3 cut(s) 1765, 1796, 1859
BspPI GGATC 5 cut(s) 124, 907, 1050, 1835, 2344
BspT104I TTCGAA 1 cut(s) 659
BspT107I GGYRCC 1 cut(s) 1763
BspTNI GGTCTC 1 cut(s) 1238
BsrDI GCAATG 4 cut(s) 532, 1161, 1482, 2356
BsrI ACTGG 6 cut(s) 142, 638, 987, 1187, 1776, 2172
BssECI CCNNGG 3 cut(s) 916, 1297, 1957
BssT1I CCWWGG 1 cut(s) 916
Bst2UI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
Bst4CI ACNGT 4 cut(s) 299, 1020, 2143, 2159
Bst6I CTCTTC 4 cut(s) 13, 199, 2069, 2121
BstBI TTCGAA 1 cut(s) 659
BstC8I GCNNGC 4 cut(s) 523, 583, 612, 1273
BstDEI CTNAG 9 cut(s) 123, 496, 615, 702, 732, 1104, 1128, 1173, 2064
BstDSI CCRYGG 1 cut(s) 916
BstF5I GGATG 6 cut(s) 523, 607, 850, 1141, 1673, 1909
BstFNI CGCG 1 cut(s) 758
BstHHI GCGC 1 cut(s) 758
BstMAI GTCTC 4 cut(s) 1238, 1418, 2004, 2275
BstMWI GCNNNNNNNGC 2 cut(s) 398, 1834
BstNI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
BstNSI RCATGY 3 cut(s) 493, 879, 1378
BstSCI CCNGG 4 cut(s) 1038, 1209, 1296, 1957
BstSLI GKGCMC 1 cut(s) 883
BstUI CGCG 1 cut(s) 758
BstV1I GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
BstV2I GAAGAC 1 cut(s) 1529
BstX2I RGATCY 1 cut(s) 2336
BstYI RGATCY 1 cut(s) 2336
BsuI GTATCC 1 cut(s) 2119
BsuRI GGCC 3 cut(s) 1237, 1302, 1605
BtgI CCRYGG 1 cut(s) 916
BtrI CACGTC 1 cut(s) 1691
BtsCI GGATG 6 cut(s) 523, 607, 850, 1141, 1673, 1909
BtsIMutI CAGTG 5 cut(s) 135, 186, 208, 645, 2164
Cac8I GCNNGC 4 cut(s) 523, 583, 612, 1273
CciI TCATGA 2 cut(s) 1912, 1993
CfoI GCGC 1 cut(s) 758
Cfr13I GGNCC 5 cut(s) 1236, 1300, 1603, 1717, 1795
CseI GACGC 1 cut(s) 1249
Csp6I GTAC 2 cut(s) 493, 1378
CviQI GTAC 2 cut(s) 493, 1378
DdeI CTNAG 9 cut(s) 123, 496, 615, 702, 732, 1104, 1128, 1173, 2064
DriI GACNNNNNGTC 1 cut(s) 315
Eam1104I CTCTTC 4 cut(s) 13, 199, 2069, 2121
Eam1105I GACNNNNNGTC 1 cut(s) 315
EarI CTCTTC 4 cut(s) 13, 199, 2069, 2121
Ecl136II GAGCTC 1 cut(s) 1837
Eco130I CCWWGG 1 cut(s) 916
Eco24I GRGCYC 1 cut(s) 1839
Eco31I GGTCTC 1 cut(s) 1238
Eco32I GATATC 3 cut(s) 1050, 1068, 1161
Eco47I GGWCC 2 cut(s) 1717, 1795
Eco53kI GAGCTC 1 cut(s) 1837
EcoICRI GAGCTC 1 cut(s) 1837
EcoO109I RGGNCCY 1 cut(s) 1717
EcoRI GAATTC 2 cut(s) 568, 661
EcoRII CCWGG 4 cut(s) 1038, 1209, 1296, 1957
EcoRV GATATC 3 cut(s) 1050, 1068, 1161
EcoT14I CCWWGG 1 cut(s) 916
EcoT22I ATGCAT 3 cut(s) 429, 1408, 1673
EcoT38I GRGCYC 1 cut(s) 1839
ErhI CCWWGG 1 cut(s) 916
Esp3I CGTCTC 1 cut(s) 2275
FalI AAGNNNNNCTT 2 cut(s) 2300, 2332
FaqI GGGAC 4 cut(s) 164, 285, 1372, 1808
FauNDI CATATG 2 cut(s) 157, 978
FbaI TGATCA 2 cut(s) 483, 628
Fnu4HI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
FokI GGATG 6 cut(s) 530, 614, 857, 1148, 1680, 1916
FriOI GRGCYC 1 cut(s) 1839
Fsp4HI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
FspBI CTAG 3 cut(s) 42, 377, 2051
GlaI GCGC 1 cut(s) 757
GluI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
HaeIII GGCC 3 cut(s) 1237, 1302, 1605
HgaI GACGC 1 cut(s) 1249
HhaI GCGC 1 cut(s) 758
Hin6I GCGC 1 cut(s) 756
HinP1I GCGC 1 cut(s) 756
HindIII AAGCTT 3 cut(s) 279, 384, 2277
HinfI GANTC 7 cut(s) 94, 171, 191, 554, 1118, 1309, 1619
HphI GGTGA 6 cut(s) 1267, 1820, 1907, 2199, 2311, 2312
Hpy166II GTNNAC 3 cut(s) 881, 898, 2201
Hpy188I TCNGA 8 cut(s) 126, 406, 460, 633, 1047, 1192, 2067, 2153
Hpy188III TCNNGA 4 cut(s) 1913, 1994, 2272, 2288
Hpy8I GTNNAC 3 cut(s) 881, 898, 2201
Hpy99I CGWCG 1 cut(s) 1611
HpyAV CCTTC 4 cut(s) 407, 730, 1126, 2075
HpyCH4III ACNGT 4 cut(s) 299, 1020, 2143, 2159
HpyCH4IV ACGT 1 cut(s) 1690
HpyF10VI GCNNNNNNNGC 2 cut(s) 398, 1834
HpyF3I CTNAG 9 cut(s) 123, 496, 615, 702, 732, 1104, 1128, 1173, 2064
HpySE526I ACGT 1 cut(s) 1690
HspAI GCGC 1 cut(s) 756
Ksp22I TGATCA 2 cut(s) 483, 628
LmnI GCTCC 2 cut(s) 753, 1571
Lsp1109I GCAGC 6 cut(s) 148, 1040, 1087, 1231, 1273, 2270
LweI GCATC 8 cut(s) 410, 414, 508, 624, 1206, 1617, 1658, 1923
MaeI CTAG 3 cut(s) 42, 377, 2051
MaeII ACGT 1 cut(s) 1690
MaeIII GTNAC 8 cut(s) 203, 503, 697, 1073, 1534, 1580, 2249, 2288
MboII GAAGA 7 cut(s) 186, 950, 1534, 1673, 1833, 2086, 2138
MfeI CAATTG 1 cut(s) 2172
MflI RGATCY 1 cut(s) 2336
MhlI GDGCHC 2 cut(s) 883, 1839
MlyI GAGTC 2 cut(s) 180, 185
MmeI TCCRAC 1 cut(s) 531
Mph1103I ATGCAT 3 cut(s) 429, 1408, 1673
MroXI GAANNNNTTC 2 cut(s) 1019, 2142
MseI TTAA 6 cut(s) 954, 1338, 1344, 1371, 1656, 2328
MslI CAYNNNNRTG 3 cut(s) 272, 1253, 2297
MspA1I CMGCKG 2 cut(s) 893, 1222
MspR9I CCNGG 4 cut(s) 1040, 1211, 1298, 1959
MunI CAATTG 1 cut(s) 2172
Mva1269I GAATGC 1 cut(s) 1459
MvaI CCWGG 4 cut(s) 1040, 1211, 1298, 1959
MvnI CGCG 1 cut(s) 758
MwoI GCNNNNNNNGC 2 cut(s) 398, 1834
NcoI CCATGG 1 cut(s) 916
NdeI CATATG 2 cut(s) 157, 978
NlaIV GGNNCC 3 cut(s) 1765, 1796, 1859
NmeAIII GCCGAG 3 cut(s) 688, 1036, 1247
NmuCI GTSAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
NsiI ATGCAT 3 cut(s) 429, 1408, 1673
NspI RCATGY 3 cut(s) 493, 879, 1378
NspV TTCGAA 1 cut(s) 659
OliI CACNNNNGTG 1 cut(s) 1253
PagI TCATGA 2 cut(s) 1912, 1993
PciI ACATGT 2 cut(s) 489, 1374
PcsI WCGNNNNNNNCGW 2 cut(s) 656, 755
PctI GAATGC 1 cut(s) 1459
PdmI GAANNNNTTC 2 cut(s) 1019, 2142
PfeI GAWTC 5 cut(s) 94, 554, 1118, 1309, 1619
PfoI TCCNGGA 1 cut(s) 1209
PkrI GCNGC 6 cut(s) 163, 1030, 1102, 1221, 1288, 2260
PleI GAGTC 2 cut(s) 179, 185
PpsI GAGTC 2 cut(s) 179, 185
PpuMI RGGWCCY 1 cut(s) 1717
PscI ACATGT 2 cut(s) 489, 1374
Psp124BI GAGCTC 1 cut(s) 1839
Psp5II RGGWCCY 1 cut(s) 1717
Psp6I CCWGG 4 cut(s) 1038, 1209, 1296, 1957
PspGI CCWGG 4 cut(s) 1038, 1209, 1296, 1957
PspN4I GGNNCC 3 cut(s) 1765, 1796, 1859
PspPI GGNCC 5 cut(s) 1236, 1300, 1603, 1717, 1795
PspPPI RGGWCCY 1 cut(s) 1717
PsuI RGATCY 1 cut(s) 2336
PvuII CAGCTG 2 cut(s) 893, 1222
RsaI GTAC 2 cut(s) 494, 1379
RsaNI GTAC 2 cut(s) 493, 1378
RseI CAYNNNNRTG 3 cut(s) 272, 1253, 2297
SacI GAGCTC 1 cut(s) 1839
SaqAI TTAA 6 cut(s) 954, 1338, 1344, 1371, 1656, 2328
SatI GCNGC 6 cut(s) 162, 1029, 1101, 1220, 1287, 2259
Sau96I GGNCC 5 cut(s) 1236, 1300, 1603, 1717, 1795
SchI GAGTC 2 cut(s) 180, 185
ScrFI CCNGG 4 cut(s) 1040, 1211, 1298, 1959
SduI GDGCHC 2 cut(s) 883, 1839
SfaNI GCATC 8 cut(s) 410, 414, 508, 624, 1206, 1617, 1658, 1923
SfuI TTCGAA 1 cut(s) 659
SinI GGWCC 2 cut(s) 1717, 1795
SmiMI CAYNNNNRTG 3 cut(s) 272, 1253, 2297
SmlI CTYRAG 4 cut(s) 98, 176, 1078, 1703
SmoI CTYRAG 4 cut(s) 98, 176, 1078, 1703
SsiI CCGC 1 cut(s) 2314
SspMI CTAG 3 cut(s) 42, 377, 2051
SstI GAGCTC 1 cut(s) 1839
StyD4I CCNGG 4 cut(s) 1038, 1209, 1296, 1957
StyI CCWWGG 1 cut(s) 916
TaaI ACNGT 4 cut(s) 299, 1020, 2143, 2159
TaiI ACGT 1 cut(s) 1693
TaqI TCGA 9 cut(s) 572, 659, 774, 1419, 1617, 1839, 1974, 2026, 2273
TatI WGTACW 2 cut(s) 492, 1377
TfiI GAWTC 5 cut(s) 94, 554, 1118, 1309, 1619
Tru1I TTAA 6 cut(s) 954, 1338, 1344, 1371, 1656, 2328
Tru9I TTAA 6 cut(s) 954, 1338, 1344, 1371, 1656, 2328
TscAI CASTG 5 cut(s) 142, 193, 208, 645, 2164
TseFI GTSAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
TseI GCWGC 6 cut(s) 161, 1028, 1100, 1219, 1286, 2258
Tsp45I GTSAC 7 cut(s) 203, 503, 697, 1534, 1580, 2249, 2288
TspGWI ACGGA 1 cut(s) 1680
TspRI CASTG 5 cut(s) 142, 193, 208, 645, 2164
VneI GTGCAC 1 cut(s) 879
VpaK11BI GGWCC 2 cut(s) 1717, 1795
XapI RAATTY 5 cut(s) 225, 568, 661, 1997, 2227
XceI RCATGY 3 cut(s) 493, 879, 1378
XmnI GAANNNNTTC 2 cut(s) 1019, 2142
XspI CTAG 3 cut(s) 42, 377, 2051
Zsp2I ATGCAT 3 cut(s) 429, 1408, 1673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.