RLG00000025211

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0018505
Physical Location & Seq
Reverse (-)
43021650 .. 43023968
2319 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025211

Sequence Viewer

Length: 2319 bp
ATGACCATAAACTTGTCAATTTTAGAAACCCAGTTGCCAAAATGCAAGAATCTCAAGCAGTTCAACCAAATACTATCTCAGATGATCCTCACTGGTTTCATTAGGGACACATATGCTGCAAGTAGAGTCCTCAAGTTCTCCACCGACTCTTCTTTTAGTGACATTGATTTGTCATTAAGAATTTTCAACCACATTGAGAACTCAAATGGGTTCATTTGGAACACTATGATGAAAGCTTATGTACAAAGAAACTGTCCCCAAAAGACTTTGAGTCTTTACAAATTGATGTTGGGTAAGAATGGGGATAGAGATCATTATACATACCCAATCCTAGTTCAAGCTTGTGCTATGAGAGCATCAGAGTTTGAAGGGCAACAGATGCATAGTCATATTTTGAAGTTTGGGTTTGGTTCAGATGTGCATGTGCAGAACACATTGATCAATATGTACTCTGTTTGTGACAATATGAGGGATGCACGCAATGTGTTTGATGAAATGCCTGTGTTGGATTCAGTCGCGTGGAATTCGATGTTGGCAGGGTATGTTAGGGTGGGAGATGTGGAGCAGGCAAAGTGTATATACGAGCAGATGCCAGTGAGGAACACGATTGCTTCGAATTCTATGATTGTATTGTTTGGTAAAAGAGGTTGTGTGATTGAGGCTCGGCGGTTGTTTGATGAACTGCCTCAGAAGGATATGGTTTCTTGGAGCACGTTGGTTTCTTGTTTCGAGCAAAATGAGACGTATGAGGAAGCTTTGGATATGTTTGTGAAAATGGTTGCTAATGGAGTTATGGTGGATGAGGTTGTGGTGGTTAGTGTGCTTTCGGCATGTGCACATTTGTCAGCTGTCCACACAGGGAAGTTGATCCATGGCTTAGTTGTGAAGATTGGAATTGAAAGTTATGTTAATCTTCAAAATGCGTTTATTCACATGTATTCGAGTTGTGGGGAGATAATGGTTGCGGAGAAACTGTTCAATGCAGCCTATAACCTGGATCAGATATCTTGGAACTCAATGATATCGGGGTACTTGAGATGTGGTTTAGTTGAAGCTGCTAAGACATTATTTGATTCCATGCCTGAGAAGGATGTAGTGTCTTGGAGTGCAATGATATCAGGCTATGCTCAGCATGACCGGTTTTCAGAAACTTTGGCATTGTTCCAGGAGATGCAGCTGTGTGGAATTAGGCCTGATGAGACCACTTTGGTGAGCGTCATCTCGGCTTGCACTCATTTGGCTGCCCTTGACCTGGGCCAATGGATTCATGCTTATATAAGGAAAAATAGCCTTAAAGTTAATGTCTTTCTTGGGACAACCCTTATTAACATGTACTTGAAATGCGGGTGTGTGGAAAATGCATTGGAGGTTTTCCAAGAGACAGCAGAAAAGGGAGTTTCTACTTGGAATGCTCTTATTCTTGGGTTGGCAATGAATGGGTTGGTGGAGAAGTCACTTGAAATGTTTTCAGAGATGAAGAAATGTGGTGAGGCACCTAATGAGATAACCTTCATGGGAGTTATTGGAGCTTGTCGTCACATGGGCTTAGTAGATGATGGGCGTCGCCACTTTGATTCCATGATGCAGGAACACAAGATAGAAGCCAATGTTAAGCATTACGGATGCATGGTTGATCTTCTCGGACGTGCTGGTATGCTCAAGGAGGCAGAGGACCTCATTGAAAGTATGCCAATGACACCAGATGTTGCTACTTGGGGTGCCTTATTGGGGGCTTGTAAAAAACATGGGGACCATGACAGGGGTCAGAGGATAGGAAGAAAGCTCATTGAGTTCGATCCTAACCATGATGGTTTCCACGTGTTGTTGTCCAATATCTGTGCTTCAAAAGGTGATTGGCATGGTGTTTATGAGATTAGGGGAATAATGATGCAACACGGGGTGGTAAAGACCCCAGGTTGTAGCATGATCGAAGCAGATGGTGTAGTTCATGAATTTCTAGCAGGAGACAAGAAACACCCTCGAATGAAAGAGATTGAGGTTATGCTAGATGAAATGGCTCAGAAATTGAAGAGGGAAGGTTATGCACCAGATACAAATGAGGTATCCTTTGACATTGATGAAGAGGAGAAAGAAACTGCTCTTTTCAGACACAGTGAGAAACTGGCAATTGCCTTTGGGCTAATCGCTATCAGTCCACCATCACCAATACGAATAATAAAGAATTTGCGAATATGTAATGATTGTCACATGGCAGCAAAGTTCGTCTCGAAAGCTTTTGGTCGTGACATTGTGGTGAGGGATAAGCACCGTTTTCACCACTTTAAGCAGGGATCTTGTTCCTGCAATGACTATTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

773

Amino Acids

86.92

Weight (kDa)

6.04

Isoelectric Point (pI)

38.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 71 - 116 2.5e-07 PPR repeat family
PPR PF01535 335 - 364 1.2e-07 PPR repeat
PPR_2 PF13041 363 - 411 7.2e-10 PPR repeat family
PPR PF01535 366 - 396 8.6e-07 PPR repeat
PPR_2 PF13041 465 - 511 7.8e-10 PPR repeat family
PPR PF01535 467 - 496 2.7e-07 PPR repeat
E_motif PF20431 582 - 644 4.4e-12 E motif
Eplus_motif PF20430 649 - 676 5e-06 E+ motif
DYW_deaminase PF14432 680 - 772 8e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0018505)

Species Orthologous Gene IDs
malus_domestica MD04G1191500.v1.1
prunus_persica Prupe.6G310100_v2.0.a1
pyrus_communis pycom04g16910
rosa_chinensis RchiOBHm_Chr3g0457551
rosa_laevigata RLG00000025211
rosa_multiflora Rmu_sc0007404.1_g000005
rosa_roxburghii Rroxscaffold_6G00421740
rosa_rugosa Rorug03G0021300
rosa_samantha Rh3DG085600
rosa_wichuraiana Rw3G007030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1492, 1718
AccII CGCG 1 cut(s) 518
AciI CCGC 3 cut(s) 667, 965, 1344
AclWI GGATC 5 cut(s) 79, 862, 1005, 1790, 2299
AcsI RAATTY 5 cut(s) 180, 523, 616, 1952, 2182
AcvI CACGTG 1 cut(s) 1819
AcyI GRCGYC 1 cut(s) 1561
AdeI CACNNNGTG 1 cut(s) 1900
AfaI GTAC 4 cut(s) 243, 449, 1031, 1334
AfiI CCNNNNNNNGG 3 cut(s) 1252, 1728, 1759
AflIII ACRYGT 3 cut(s) 933, 1329, 1818
AgeI ACCGGT 1 cut(s) 1137
AhdI GACNNNNNGTC 1 cut(s) 270
AjiI CACGTC 1 cut(s) 1646
AjnI CCWGG 4 cut(s) 993, 1164, 1251, 1912
AjuI GAANNNNNNNTTGG 2 cut(s) 515, 547
AleI CACNNNNGTG 1 cut(s) 1208
AloI GAACNNNNNNTCC 2 cut(s) 959, 991
AluBI AGCT 9 cut(s) 236, 341, 755, 848, 1055, 1177, 1529, 1783, 2234
AluI AGCT 9 cut(s) 236, 341, 755, 848, 1055, 1177, 1529, 1783, 2234
Alw21I GWGCWC 2 cut(s) 713, 838
Alw26I GTCTC 5 cut(s) 734, 1193, 1373, 1959, 2230
Alw44I GTGCAC 1 cut(s) 834
AlwI GGATC 5 cut(s) 79, 862, 1005, 1790, 2299
AoxI GGCC 2 cut(s) 1190, 1255
ApaLI GTGCAC 1 cut(s) 834
ApeKI GCWGC 6 cut(s) 116, 983, 1055, 1174, 1241, 2213
ApoI RAATTY 5 cut(s) 180, 523, 616, 1952, 2182
ArsI GACNNNNNNTTYG 2 cut(s) 238, 270
AsiGI ACCGGT 1 cut(s) 1137
Asp700I GAANNNNTTC 1 cut(s) 974
AspS9I GGNCC 3 cut(s) 1255, 1672, 1750
AsuHPI GGTGA 6 cut(s) 1222, 1499, 1862, 2154, 2266, 2267
AsuII TTCGAA 1 cut(s) 614
AvaII GGWCC 2 cut(s) 1672, 1750
BaeGI GKGCMC 1 cut(s) 838
BanI GGYRCC 2 cut(s) 1492, 1718
BbrPI CACGTG 1 cut(s) 1819
Bbv12I GWGCWC 2 cut(s) 713, 838
BbvI GCAGC 6 cut(s) 103, 995, 1042, 1186, 1228, 2225
BccI CCATC 4 cut(s) 1550, 1802, 1931, 2167
BciT130I CCWGG 4 cut(s) 995, 1166, 1253, 1914
BciVI GTATCC 1 cut(s) 2074
BclI TGATCA 1 cut(s) 438
BcoDI GTCTC 5 cut(s) 734, 1193, 1373, 1959, 2230
BfaI CTAG 3 cut(s) 332, 1958, 2006
BfuI GTATCC 1 cut(s) 2074
BisI GCNGC 6 cut(s) 117, 984, 1056, 1175, 1242, 2214
BlpI GCTNAGC 1 cut(s) 1128
BlsI GCNGC 6 cut(s) 118, 985, 1057, 1176, 1243, 2215
Bme1390I CCNGG 4 cut(s) 995, 1166, 1253, 1914
Bme18I GGWCC 2 cut(s) 1672, 1750
BmeRI GACNNNNNGTC 1 cut(s) 270
BmgBI CACGTC 1 cut(s) 1646
BmgT120I GGNCC 3 cut(s) 1255, 1672, 1750
BmiI GGNNCC 3 cut(s) 1494, 1720, 1751
BmrFI CCNGG 4 cut(s) 995, 1166, 1253, 1914
BmrI ACTGGG 1 cut(s) 25
BmsI GCATC 8 cut(s) 365, 369, 463, 579, 1161, 1572, 1613, 1878
BmuI ACTGGG 1 cut(s) 25
BoxI GACNNNNGTC 1 cut(s) 1761
Bpu1102I GCTNAGC 1 cut(s) 1128
Bpu14I TTCGAA 1 cut(s) 614
BpuEI CTTGAG 4 cut(s) 38, 116, 1054, 1643
BsaAI YACGTR 1 cut(s) 1819
BsaBI GATNNNNATC 1 cut(s) 309
BsaHI GRCGYC 1 cut(s) 1561
BsaI GGTCTC 1 cut(s) 1193
BsaJI CCNNGG 3 cut(s) 871, 1252, 1912
BsaWI WCCGGW 1 cut(s) 1137
BsaXI ACNNNNNCTCC 4 cut(s) 780, 810, 959, 989
Bsc4I CCNNNNNNNGG 3 cut(s) 1252, 1728, 1759
Bse118I RCCGGY 1 cut(s) 1137
Bse1I ACTGG 4 cut(s) 31, 97, 593, 2127
Bse3DI GCAATG 4 cut(s) 487, 1116, 1437, 2311
Bse8I GATNNNNATC 1 cut(s) 309
BseBI CCWGG 4 cut(s) 995, 1166, 1253, 1914
BseDI CCNNGG 3 cut(s) 871, 1252, 1912
BseGI GGATG 4 cut(s) 478, 805, 1096, 1628
BseJI GATNNNNATC 1 cut(s) 309
BseLI CCNNNNNNNGG 3 cut(s) 1252, 1728, 1759
BseMI GCAATG 4 cut(s) 487, 1116, 1437, 2311
BseMII CTCAG 5 cut(s) 92, 701, 1074, 1142, 2033
BseNI ACTGG 4 cut(s) 31, 97, 593, 2127
BseRI GAGGAG 1 cut(s) 2099
BseSI GKGCMC 1 cut(s) 838
BseXI GCAGC 6 cut(s) 103, 995, 1042, 1186, 1228, 2225
BsgI GTGCAG 1 cut(s) 446
Bsh1236I CGCG 1 cut(s) 518
BshFI GGCC 2 cut(s) 1192, 1257
BshNI GGYRCC 2 cut(s) 1492, 1718
BshTI ACCGGT 1 cut(s) 1137
BsiHKAI GWGCWC 2 cut(s) 713, 838
BsiSI CCGG 1 cut(s) 1138
BslFI GGGAC 4 cut(s) 119, 240, 1327, 1763
BslI CCNNNNNNNGG 3 cut(s) 1252, 1728, 1759
BsmAI GTCTC 5 cut(s) 734, 1193, 1373, 1959, 2230
BsmBI CGTCTC 2 cut(s) 734, 2230
BsmFI GGGAC 4 cut(s) 119, 240, 1327, 1763
BsmI GAATGC 1 cut(s) 1414
BsnI GGCC 2 cut(s) 1192, 1257
Bso31I GGTCTC 1 cut(s) 1193
Bsp119I TTCGAA 1 cut(s) 614
Bsp1286I GDGCHC 2 cut(s) 713, 838
Bsp1407I TGTACA 1 cut(s) 241
Bsp143I GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
Bsp1720I GCTNAGC 1 cut(s) 1128
Bsp19I CCATGG 1 cut(s) 871
BspACI CCGC 3 cut(s) 667, 965, 1344
BspANI GGCC 2 cut(s) 1192, 1257
BspCNI CTCAG 5 cut(s) 91, 700, 1075, 1141, 2032
BspFNI CGCG 1 cut(s) 518
BspHI TCATGA 1 cut(s) 1948
BspLI GGNNCC 3 cut(s) 1494, 1720, 1751
BspPI GGATC 5 cut(s) 79, 862, 1005, 1790, 2299
BspT104I TTCGAA 1 cut(s) 614
BspT107I GGYRCC 2 cut(s) 1492, 1718
BspTNI GGTCTC 1 cut(s) 1193
BsrDI GCAATG 4 cut(s) 487, 1116, 1437, 2311
BsrFI RCCGGY 1 cut(s) 1137
BsrGI TGTACA 1 cut(s) 241
BsrI ACTGG 4 cut(s) 31, 97, 593, 2127
BssAI RCCGGY 1 cut(s) 1137
BssECI CCNNGG 3 cut(s) 871, 1252, 1912
BssMI GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
BssNI GRCGYC 1 cut(s) 1561
BssT1I CCWWGG 1 cut(s) 871
Bst2UI CCWGG 4 cut(s) 995, 1166, 1253, 1914
Bst4CI ACNGT 4 cut(s) 254, 975, 2114, 2270
Bst6I CTCTTC 3 cut(s) 154, 2024, 2076
BstACI GRCGYC 1 cut(s) 1561
BstAPI GCANNNNNTGC 1 cut(s) 379
BstAUI TGTACA 1 cut(s) 241
BstBAI YACGTR 1 cut(s) 1819
BstBI TTCGAA 1 cut(s) 614
BstC8I GCNNGC 3 cut(s) 478, 567, 1228
BstDEI CTNAG 8 cut(s) 78, 687, 877, 1059, 1083, 1128, 1546, 2019
BstDSI CCRYGG 1 cut(s) 871
BstF5I GGATG 4 cut(s) 478, 805, 1096, 1628
BstFNI CGCG 1 cut(s) 518
BstKTI GATC 9 cut(s) 87, 313, 441, 870, 1000, 1636, 1798, 1929, 2294
BstMAI GTCTC 5 cut(s) 734, 1193, 1373, 1959, 2230
BstMBI GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
BstMWI GCNNNNNNNGC 2 cut(s) 353, 379
BstNI CCWGG 4 cut(s) 995, 1166, 1253, 1914
BstNSI RCATGY 4 cut(s) 425, 834, 937, 1333
BstPAI GACNNNNGTC 1 cut(s) 1761
BstSCI CCNGG 4 cut(s) 993, 1164, 1251, 1912
BstSLI GKGCMC 1 cut(s) 838
BstUI CGCG 1 cut(s) 518
BstV1I GCAGC 6 cut(s) 103, 995, 1042, 1186, 1228, 2225
BstX2I RGATCY 1 cut(s) 2291
BstYI RGATCY 1 cut(s) 2291
BsuI GTATCC 1 cut(s) 2074
BsuRI GGCC 2 cut(s) 1192, 1257
BtgI CCRYGG 1 cut(s) 871
BtrI CACGTC 1 cut(s) 1646
BtsCI GGATG 4 cut(s) 478, 805, 1096, 1628
BtsIMutI CAGTG 3 cut(s) 90, 600, 2119
Cac8I GCNNGC 3 cut(s) 478, 567, 1228
CciI TCATGA 1 cut(s) 1948
Cfr10I RCCGGY 1 cut(s) 1137
Cfr13I GGNCC 3 cut(s) 1255, 1672, 1750
CseI GACGC 2 cut(s) 1204, 1550
Csp6I GTAC 4 cut(s) 242, 448, 1030, 1333
CspAI ACCGGT 1 cut(s) 1137
CviQI GTAC 4 cut(s) 242, 448, 1030, 1333
DdeI CTNAG 8 cut(s) 78, 687, 877, 1059, 1083, 1128, 1546, 2019
DpnI GATC 9 cut(s) 86, 312, 440, 869, 999, 1635, 1797, 1928, 2293
DpnII GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
DraIII CACNNNGTG 1 cut(s) 1900
DriI GACNNNNNGTC 1 cut(s) 270
Eam1104I CTCTTC 3 cut(s) 154, 2024, 2076
Eam1105I GACNNNNNGTC 1 cut(s) 270
EarI CTCTTC 3 cut(s) 154, 2024, 2076
Eco130I CCWWGG 1 cut(s) 871
Eco147I AGGCCT 1 cut(s) 1192
Eco31I GGTCTC 1 cut(s) 1193
Eco32I GATATC 3 cut(s) 1005, 1023, 1116
Eco47I GGWCC 2 cut(s) 1672, 1750
Eco72I CACGTG 1 cut(s) 1819
EcoO109I RGGNCCY 1 cut(s) 1672
EcoRI GAATTC 2 cut(s) 523, 616
EcoRII CCWGG 4 cut(s) 993, 1164, 1251, 1912
EcoRV GATATC 3 cut(s) 1005, 1023, 1116
EcoT14I CCWWGG 1 cut(s) 871
EcoT22I ATGCAT 3 cut(s) 384, 1363, 1628
ErhI CCWWGG 1 cut(s) 871
Esp3I CGTCTC 2 cut(s) 734, 2230
FaqI GGGAC 4 cut(s) 119, 240, 1327, 1763
FauI CCCGC 1 cut(s) 1337
FauNDI CATATG 1 cut(s) 112
FbaI TGATCA 1 cut(s) 438
Fnu4HI GCNGC 6 cut(s) 117, 984, 1056, 1175, 1242, 2214
FokI GGATG 4 cut(s) 485, 812, 1103, 1635
Fsp4HI GCNGC 6 cut(s) 117, 984, 1056, 1175, 1242, 2214
FspBI CTAG 3 cut(s) 332, 1958, 2006
GluI GCNGC 6 cut(s) 117, 984, 1056, 1175, 1242, 2214
HaeIII GGCC 2 cut(s) 1192, 1257
HapII CCGG 1 cut(s) 1138
HgaI GACGC 2 cut(s) 1204, 1550
Hin1I GRCGYC 1 cut(s) 1561
HindIII AAGCTT 4 cut(s) 234, 339, 753, 2232
HinfI GANTC 8 cut(s) 49, 126, 146, 271, 509, 1073, 1264, 1574
HpaII CCGG 1 cut(s) 1138
HphI GGTGA 6 cut(s) 1222, 1499, 1862, 2154, 2266, 2267
Hpy166II GTNNAC 3 cut(s) 836, 853, 2156
Hpy188III TCNNGA 3 cut(s) 1949, 2227, 2243
Hpy8I GTNNAC 3 cut(s) 836, 853, 2156
Hpy99I CGWCG 1 cut(s) 1566
HpyAV CCTTC 5 cut(s) 362, 685, 1081, 1519, 2030
HpyCH4III ACNGT 4 cut(s) 254, 975, 2114, 2270
HpyCH4IV ACGT 4 cut(s) 713, 743, 1645, 1818
HpyF10VI GCNNNNNNNGC 2 cut(s) 353, 379
HpyF3I CTNAG 8 cut(s) 78, 687, 877, 1059, 1083, 1128, 1546, 2019
HpySE526I ACGT 4 cut(s) 713, 743, 1645, 1818
Hsp92I GRCGYC 1 cut(s) 1561
Ksp22I TGATCA 1 cut(s) 438
Kzo9I GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
LmnI GCTCC 3 cut(s) 562, 708, 1526
Lsp1109I GCAGC 6 cut(s) 103, 995, 1042, 1186, 1228, 2225
LweI GCATC 8 cut(s) 365, 369, 463, 579, 1161, 1572, 1613, 1878
MaeI CTAG 3 cut(s) 332, 1958, 2006
MaeII ACGT 4 cut(s) 713, 743, 1645, 1818
MaeIII GTNAC 6 cut(s) 158, 458, 1452, 1535, 2204, 2243
MalI GATC 9 cut(s) 86, 312, 440, 869, 999, 1635, 1797, 1928, 2293
MboI GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
MboII GAAGA 8 cut(s) 141, 898, 905, 1489, 1628, 1788, 2041, 2093
MfeI CAATTG 1 cut(s) 2127
MflI RGATCY 1 cut(s) 2291
MhlI GDGCHC 2 cut(s) 713, 838
MlyI GAGTC 3 cut(s) 135, 140, 280
MmeI TCCRAC 1 cut(s) 486
Mph1103I ATGCAT 3 cut(s) 384, 1363, 1628
MroXI GAANNNNTTC 1 cut(s) 974
MseI TTAA 7 cut(s) 176, 909, 1293, 1299, 1326, 1611, 2283
MslI CAYNNNNRTG 3 cut(s) 227, 1208, 2252
MspA1I CMGCKG 2 cut(s) 848, 1177
MspI CCGG 1 cut(s) 1138
MspR9I CCNGG 4 cut(s) 995, 1166, 1253, 1914
MunI CAATTG 1 cut(s) 2127
Mva1269I GAATGC 1 cut(s) 1414
MvaI CCWGG 4 cut(s) 995, 1166, 1253, 1914
MvnI CGCG 1 cut(s) 518
MwoI GCNNNNNNNGC 2 cut(s) 353, 379
NcoI CCATGG 1 cut(s) 871
NdeI CATATG 1 cut(s) 112
NdeII GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
NlaIV GGNNCC 3 cut(s) 1494, 1720, 1751
NmeAIII GCCGAG 2 cut(s) 643, 1202
NmuCI GTSAC 6 cut(s) 158, 458, 1452, 1535, 2204, 2243
NsiI ATGCAT 3 cut(s) 384, 1363, 1628
NspI RCATGY 4 cut(s) 425, 834, 937, 1333
NspV TTCGAA 1 cut(s) 614
OliI CACNNNNGTG 1 cut(s) 1208
PagI TCATGA 1 cut(s) 1948
PceI AGGCCT 1 cut(s) 1192
PciI ACATGT 2 cut(s) 933, 1329
PcsI WCGNNNNNNNCGW 1 cut(s) 611
PctI GAATGC 1 cut(s) 1414
PdmI GAANNNNTTC 1 cut(s) 974
PfeI GAWTC 5 cut(s) 49, 509, 1073, 1264, 1574
PfoI TCCNGGA 1 cut(s) 1164
PinAI ACCGGT 1 cut(s) 1137
PkrI GCNGC 6 cut(s) 118, 985, 1057, 1176, 1243, 2215
PleI GAGTC 3 cut(s) 134, 140, 279
PmaCI CACGTG 1 cut(s) 1819
PmlI CACGTG 1 cut(s) 1819
PpsI GAGTC 3 cut(s) 134, 140, 279
Ppu21I YACGTR 1 cut(s) 1819
PpuMI RGGWCCY 1 cut(s) 1672
PscI ACATGT 2 cut(s) 933, 1329
PshAI GACNNNNGTC 1 cut(s) 1761
Psp5II RGGWCCY 1 cut(s) 1672
Psp6I CCWGG 4 cut(s) 993, 1164, 1251, 1912
PspCI CACGTG 1 cut(s) 1819
PspGI CCWGG 4 cut(s) 993, 1164, 1251, 1912
PspN4I GGNNCC 3 cut(s) 1494, 1720, 1751
PspPI GGNCC 3 cut(s) 1255, 1672, 1750
PspPPI RGGWCCY 1 cut(s) 1672
PsuI RGATCY 1 cut(s) 2291
PvuII CAGCTG 2 cut(s) 848, 1177
RsaI GTAC 4 cut(s) 243, 449, 1031, 1334
RsaNI GTAC 4 cut(s) 242, 448, 1030, 1333
RseI CAYNNNNRTG 3 cut(s) 227, 1208, 2252
SaqAI TTAA 7 cut(s) 176, 909, 1293, 1299, 1326, 1611, 2283
SatI GCNGC 6 cut(s) 117, 984, 1056, 1175, 1242, 2214
Sau3AI GATC 9 cut(s) 84, 310, 438, 867, 997, 1633, 1795, 1926, 2291
Sau96I GGNCC 3 cut(s) 1255, 1672, 1750
SchI GAGTC 3 cut(s) 135, 140, 280
ScrFI CCNGG 4 cut(s) 995, 1166, 1253, 1914
SduI GDGCHC 2 cut(s) 713, 838
SfaNI GCATC 8 cut(s) 365, 369, 463, 579, 1161, 1572, 1613, 1878
SfuI TTCGAA 1 cut(s) 614
SinI GGWCC 2 cut(s) 1672, 1750
SmiMI CAYNNNNRTG 3 cut(s) 227, 1208, 2252
SmlI CTYRAG 4 cut(s) 53, 131, 1033, 1658
SmoI CTYRAG 4 cut(s) 53, 131, 1033, 1658
SseBI AGGCCT 1 cut(s) 1192
SsiI CCGC 3 cut(s) 667, 965, 1344
SspMI CTAG 3 cut(s) 332, 1958, 2006
StuI AGGCCT 1 cut(s) 1192
StyD4I CCNGG 4 cut(s) 993, 1164, 1251, 1912
StyI CCWWGG 1 cut(s) 871
TaaI ACNGT 4 cut(s) 254, 975, 2114, 2270
TaiI ACGT 4 cut(s) 716, 746, 1648, 1821
TaqI TCGA 8 cut(s) 527, 614, 729, 941, 1794, 1929, 1981, 2228
TatI WGTACW 3 cut(s) 241, 447, 1332
TfiI GAWTC 5 cut(s) 49, 509, 1073, 1264, 1574
Tru1I TTAA 7 cut(s) 176, 909, 1293, 1299, 1326, 1611, 2283
Tru9I TTAA 7 cut(s) 176, 909, 1293, 1299, 1326, 1611, 2283
TscAI CASTG 3 cut(s) 97, 600, 2119
TseFI GTSAC 6 cut(s) 158, 458, 1452, 1535, 2204, 2243
TseI GCWGC 6 cut(s) 116, 983, 1055, 1174, 1241, 2213
Tsp45I GTSAC 6 cut(s) 158, 458, 1452, 1535, 2204, 2243
TspGWI ACGGA 1 cut(s) 1635
TspRI CASTG 3 cut(s) 97, 600, 2119
VneI GTGCAC 1 cut(s) 834
VpaK11BI GGWCC 2 cut(s) 1672, 1750
XapI RAATTY 5 cut(s) 180, 523, 616, 1952, 2182
XceI RCATGY 4 cut(s) 425, 834, 937, 1333
XmnI GAANNNNTTC 1 cut(s) 974
XspI CTAG 3 cut(s) 332, 1958, 2006
Zsp2I ATGCAT 3 cut(s) 384, 1363, 1628
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.