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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g07410 FvH4_6g07410 FvH4_6g07410 |
| malus_domestica | MD04G1193300.v1.1 MD12G1206200.v1.1 |
| prunus_persica | Prupe.6G313400_v2.0.a1 Prupe.6G313400_v2.0.a1 Prupe.6G313400_v2.0.a1 |
| pyrus_communis | pycom04g17110 pycom04g17120 pycom04g17130 pycom12g19410 |
| rosa_chinensis | RchiOBHm_Chr3g0457011 |
| rosa_laevigata | RLG00000025252 |
| rosa_multiflora | Rmu_sc0008561.1_g000002 Rmu_sc0013600.1_g000001 Rmu_sc0038392.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00422270 |
| rosa_rugosa | Rorug03G0018400 Rorug03G0018500 |
| rosa_samantha | Rh3AG078200 Rh3BG080100 Rh3CG080000 Rh3DG081700 |
| rosa_wichuraiana | Rw3G006710 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 9 cut(s) | 1492, 1525, 1624, 1657, 1690, 1723, 1756, 1789, 1822 |
| AccII | CGCG | 2 cut(s) | 777, 1248 |
| AclWI | GGATC | 2 cut(s) | 1004, 1107 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcsI | RAATTY | 4 cut(s) | 103, 591, 867, 960 |
| AdeI | CACNNNGTG | 1 cut(s) | 935 |
| AfaI | GTAC | 2 cut(s) | 771, 1396 |
| AflII | CTTAAG | 1 cut(s) | 383 |
| AflIII | ACRYGT | 1 cut(s) | 944 |
| AjiI | CACGTC | 1 cut(s) | 947 |
| AjnI | CCWGG | 3 cut(s) | 586, 736, 1159 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1428, 1460 |
| Alw21I | GWGCWC | 2 cut(s) | 153, 334 |
| Alw26I | GTCTC | 2 cut(s) | 102, 1266 |
| AlwI | GGATC | 2 cut(s) | 1004, 1107 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 167 |
| AoxI | GGCC | 2 cut(s) | 462, 893 |
| ApeKI | GCWGC | 5 cut(s) | 167, 613, 646, 1178, 1181 |
| ApoI | RAATTY | 4 cut(s) | 103, 591, 867, 960 |
| AseI | ATTAAT | 1 cut(s) | 362 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 342, 421 |
| AspLEI | GCGC | 1 cut(s) | 1250 |
| AspS9I | GGNCC | 2 cut(s) | 543, 893 |
| AsuC2I | CCSGG | 2 cut(s) | 310, 632 |
| AsuHPI | GGTGA | 6 cut(s) | 464, 679, 707, 921, 1005, 1878 |
| AsuII | TTCGAA | 2 cut(s) | 792, 964 |
| AvaII | GGWCC | 1 cut(s) | 543 |
| BaeGI | GKGCMC | 2 cut(s) | 309, 1872 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BanI | GGYRCC | 9 cut(s) | 1492, 1525, 1624, 1657, 1690, 1723, 1756, 1789, 1822 |
| BbsI | GAAGAC | 1 cut(s) | 275 |
| Bbv12I | GWGCWC | 2 cut(s) | 153, 334 |
| BbvI | GCAGC | 5 cut(s) | 154, 625, 633, 1165, 1193 |
| BccI | CCATC | 6 cut(s) | 17, 47, 848, 878, 994, 1903 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 628, 662, 842, 876 |
| BciT130I | CCWGG | 3 cut(s) | 588, 738, 1161 |
| BciVI | GTATCC | 1 cut(s) | 1848 |
| BclI | TGATCA | 1 cut(s) | 1231 |
| BcnI | CCSGG | 2 cut(s) | 310, 632 |
| BcoDI | GTCTC | 2 cut(s) | 102, 1266 |
| BfaI | CTAG | 4 cut(s) | 135, 236, 596, 1256 |
| BfmI | CTRYAG | 2 cut(s) | 1179, 1380 |
| BfrI | CTTAAG | 1 cut(s) | 383 |
| BfuI | GTATCC | 1 cut(s) | 1848 |
| BglII | AGATCT | 1 cut(s) | 824 |
| BlpI | GCTNAGC | 1 cut(s) | 480 |
| Bme1390I | CCNGG | 5 cut(s) | 310, 588, 632, 738, 1161 |
| Bme18I | GGWCC | 1 cut(s) | 543 |
| BmgBI | CACGTC | 1 cut(s) | 947 |
| BmgT120I | GGNCC | 2 cut(s) | 543, 893 |
| BmrFI | CCNGG | 5 cut(s) | 310, 588, 632, 738, 1161 |
| BmrI | ACTGGG | 2 cut(s) | 1105, 1443 |
| BmuI | ACTGGG | 2 cut(s) | 1105, 1443 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1340 |
| BpiI | GAAGAC | 1 cut(s) | 275 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 424, 456 |
| BpmI | CTGGAG | 2 cut(s) | 720, 1454 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 480 |
| Bpu14I | TTCGAA | 2 cut(s) | 792, 964 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BpuMI | CCSGG | 2 cut(s) | 310, 632 |
| BsaI | GGTCTC | 1 cut(s) | 102 |
| BsaJI | CCNNGG | 1 cut(s) | 308 |
| BsaWI | WCCGGW | 1 cut(s) | 783 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 765, 795 |
| Bse1I | ACTGG | 7 cut(s) | 225, 495, 916, 1100, 1396, 1432, 1449 |
| BseBI | CCWGG | 3 cut(s) | 588, 738, 1161 |
| BseDI | CCNNGG | 1 cut(s) | 308 |
| BseGI | GGATG | 2 cut(s) | 1477, 1914 |
| BseMII | CTCAG | 6 cut(s) | 81, 113, 174, 427, 788, 1863 |
| BseNI | ACTGG | 7 cut(s) | 225, 495, 916, 1100, 1396, 1432, 1449 |
| BseSI | GKGCMC | 2 cut(s) | 309, 1872 |
| BseXI | GCAGC | 5 cut(s) | 154, 625, 633, 1165, 1193 |
| BsgI | GTGCAG | 1 cut(s) | 557 |
| Bsh1236I | CGCG | 2 cut(s) | 777, 1248 |
| BshFI | GGCC | 2 cut(s) | 464, 895 |
| BshNI | GGYRCC | 9 cut(s) | 1492, 1525, 1624, 1657, 1690, 1723, 1756, 1789, 1822 |
| BsiHKAI | GWGCWC | 2 cut(s) | 153, 334 |
| BsiSI | CCGG | 3 cut(s) | 310, 631, 784 |
| BsmAI | GTCTC | 2 cut(s) | 102, 1266 |
| BsmI | GAATGC | 1 cut(s) | 1882 |
| BsnI | GGCC | 2 cut(s) | 464, 895 |
| Bso31I | GGTCTC | 1 cut(s) | 102 |
| Bsp119I | TTCGAA | 2 cut(s) | 792, 964 |
| Bsp1286I | GDGCHC | 4 cut(s) | 153, 309, 334, 1872 |
| Bsp143I | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 480 |
| BspANI | GGCC | 2 cut(s) | 464, 895 |
| BspCNI | CTCAG | 6 cut(s) | 82, 112, 173, 426, 789, 1862 |
| BspFNI | CGCG | 2 cut(s) | 777, 1248 |
| BspHI | TCATGA | 2 cut(s) | 145, 1332 |
| BspMAI | CTGCAG | 2 cut(s) | 1183, 1384 |
| BspPI | GGATC | 2 cut(s) | 1004, 1107 |
| BspQI | GCTCTTC | 1 cut(s) | 515 |
| BspT104I | TTCGAA | 2 cut(s) | 792, 964 |
| BspT107I | GGYRCC | 9 cut(s) | 1492, 1525, 1624, 1657, 1690, 1723, 1756, 1789, 1822 |
| BspTI | CTTAAG | 1 cut(s) | 383 |
| BspTNI | GGTCTC | 1 cut(s) | 102 |
| BsrI | ACTGG | 7 cut(s) | 225, 495, 916, 1100, 1396, 1432, 1449 |
| BssECI | CCNNGG | 1 cut(s) | 308 |
| BssMI | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| Bst2UI | CCWGG | 3 cut(s) | 588, 738, 1161 |
| Bst4CI | ACNGT | 3 cut(s) | 664, 695, 1459 |
| Bst6I | CTCTTC | 2 cut(s) | 237, 515 |
| BstAFI | CTTAAG | 1 cut(s) | 383 |
| BstBI | TTCGAA | 2 cut(s) | 792, 964 |
| BstDEI | CTNAG | 9 cut(s) | 90, 99, 160, 413, 480, 505, 797, 992, 1849 |
| BstF5I | GGATG | 2 cut(s) | 1477, 1914 |
| BstFNI | CGCG | 2 cut(s) | 777, 1248 |
| BstHHI | GCGC | 1 cut(s) | 1250 |
| BstKTI | GATC | 6 cut(s) | 457, 511, 827, 999, 1102, 1234 |
| BstMAI | GTCTC | 2 cut(s) | 102, 1266 |
| BstMBI | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 83, 221, 655 |
| BstNI | CCWGG | 3 cut(s) | 588, 738, 1161 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1340 |
| BstSCI | CCNGG | 5 cut(s) | 308, 586, 630, 736, 1159 |
| BstSFI | CTRYAG | 2 cut(s) | 1179, 1380 |
| BstSLI | GKGCMC | 2 cut(s) | 309, 1872 |
| BstUI | CGCG | 2 cut(s) | 777, 1248 |
| BstV1I | GCAGC | 5 cut(s) | 154, 625, 633, 1165, 1193 |
| BstV2I | GAAGAC | 1 cut(s) | 275 |
| BstX2I | RGATCY | 1 cut(s) | 824 |
| BstYI | RGATCY | 1 cut(s) | 824 |
| BsuI | GTATCC | 1 cut(s) | 1848 |
| BsuRI | GGCC | 2 cut(s) | 464, 895 |
| BtrI | CACGTC | 1 cut(s) | 947 |
| BtsCI | GGATG | 2 cut(s) | 1477, 1914 |
| BtsI | GCAGTG | 2 cut(s) | 545, 1877 |
| BtsIMutI | CAGTG | 3 cut(s) | 545, 1456, 1877 |
| CaiI | CAGNNNCTG | 1 cut(s) | 167 |
| CciI | TCATGA | 2 cut(s) | 145, 1332 |
| CfoI | GCGC | 1 cut(s) | 1250 |
| Cfr13I | GGNCC | 2 cut(s) | 543, 893 |
| CseI | GACGC | 1 cut(s) | 83 |
| Csp6I | GTAC | 2 cut(s) | 770, 1395 |
| CviAII | CATG | 5 cut(s) | 146, 446, 890, 933, 1333 |
| CviQI | GTAC | 2 cut(s) | 770, 1395 |
| DdeI | CTNAG | 9 cut(s) | 90, 99, 160, 413, 480, 505, 797, 992, 1849 |
| DpnI | GATC | 6 cut(s) | 456, 510, 826, 998, 1101, 1233 |
| DpnII | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| DraIII | CACNNNGTG | 1 cut(s) | 935 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 2 cut(s) | 237, 515 |
| EarI | CTCTTC | 2 cut(s) | 237, 515 |
| Eco31I | GGTCTC | 1 cut(s) | 102 |
| Eco47I | GGWCC | 1 cut(s) | 543 |
| EcoRI | GAATTC | 2 cut(s) | 103, 591 |
| EcoRII | CCWGG | 3 cut(s) | 586, 736, 1159 |
| EcoT22I | ATGCAT | 1 cut(s) | 1228 |
| FaeI | CATG | 5 cut(s) | 149, 449, 893, 936, 1336 |
| FatI | CATG | 5 cut(s) | 145, 445, 889, 932, 1332 |
| FauNDI | CATATG | 3 cut(s) | 1086, 1228, 1860 |
| FbaI | TGATCA | 1 cut(s) | 1231 |
| FokI | GGATG | 2 cut(s) | 1464, 1921 |
| FspBI | CTAG | 4 cut(s) | 135, 236, 596, 1256 |
| GlaI | GCGC | 1 cut(s) | 1249 |
| GsuI | CTGGAG | 2 cut(s) | 720, 1454 |
| HaeIII | GGCC | 2 cut(s) | 464, 895 |
| HapII | CCGG | 3 cut(s) | 310, 631, 784 |
| HgaI | GACGC | 1 cut(s) | 83 |
| HhaI | GCGC | 1 cut(s) | 1250 |
| Hin1II | CATG | 5 cut(s) | 149, 449, 893, 936, 1336 |
| Hin6I | GCGC | 1 cut(s) | 1248 |
| HinP1I | GCGC | 1 cut(s) | 1248 |
| HincII | GTYRAC | 2 cut(s) | 921, 1345 |
| HindII | GTYRAC | 2 cut(s) | 921, 1345 |
| HpaII | CCGG | 3 cut(s) | 310, 631, 784 |
| HphI | GGTGA | 6 cut(s) | 464, 679, 707, 921, 1005, 1878 |
| Hpy166II | GTNNAC | 2 cut(s) | 921, 1345 |
| Hpy188III | TCNNGA | 8 cut(s) | 146, 284, 596, 746, 940, 1213, 1256, 1333 |
| Hpy8I | GTNNAC | 2 cut(s) | 921, 1345 |
| HpyAV | CCTTC | 3 cut(s) | 443, 630, 1219 |
| HpyCH4III | ACNGT | 3 cut(s) | 664, 695, 1459 |
| HpyCH4IV | ACGT | 2 cut(s) | 244, 946 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 83, 221, 655 |
| HpyF3I | CTNAG | 9 cut(s) | 90, 99, 160, 413, 480, 505, 797, 992, 1849 |
| HpySE526I | ACGT | 2 cut(s) | 244, 946 |
| Hsp92II | CATG | 5 cut(s) | 149, 449, 893, 936, 1336 |
| HspAI | GCGC | 1 cut(s) | 1248 |
| Ksp22I | TGATCA | 1 cut(s) | 1231 |
| Kzo9I | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| LguI | GCTCTTC | 1 cut(s) | 515 |
| LmnI | GCTCC | 1 cut(s) | 739 |
| Lsp1109I | GCAGC | 5 cut(s) | 154, 625, 633, 1165, 1193 |
| MaeI | CTAG | 4 cut(s) | 135, 236, 596, 1256 |
| MaeII | ACGT | 2 cut(s) | 244, 946 |
| MaeIII | GTNAC | 6 cut(s) | 71, 122, 436, 470, 927, 1430 |
| MalI | GATC | 6 cut(s) | 456, 510, 826, 998, 1101, 1233 |
| MboI | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| MboII | GAAGA | 9 cut(s) | 224, 280, 532, 587, 834, 978, 1029, 1119, 1925 |
| MflI | RGATCY | 1 cut(s) | 824 |
| MhlI | GDGCHC | 4 cut(s) | 153, 309, 334, 1872 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 4 cut(s) | 119, 839, 1268, 1310 |
| MmeI | TCCRAC | 4 cut(s) | 873, 1221, 1223, 1366 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 1 cut(s) | 1228 |
| MroXI | GAANNNNTTC | 2 cut(s) | 342, 421 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MseI | TTAA | 7 cut(s) | 290, 362, 384, 608, 876, 1221, 1461 |
| MslI | CAYNNNNRTG | 2 cut(s) | 450, 1951 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspCI | CTTAAG | 1 cut(s) | 383 |
| MspI | CCGG | 3 cut(s) | 310, 631, 784 |
| MspR9I | CCNGG | 5 cut(s) | 310, 588, 632, 738, 1161 |
| Mva1269I | GAATGC | 1 cut(s) | 1882 |
| MvaI | CCWGG | 3 cut(s) | 588, 738, 1161 |
| MvnI | CGCG | 2 cut(s) | 777, 1248 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 83, 221, 655 |
| NciI | CCSGG | 2 cut(s) | 310, 632 |
| NdeI | CATATG | 3 cut(s) | 1086, 1228, 1860 |
| NdeII | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| NlaIII | CATG | 5 cut(s) | 149, 449, 893, 936, 1336 |
| NmeAIII | GCCGAG | 1 cut(s) | 1867 |
| NmuCI | GTSAC | 3 cut(s) | 71, 122, 927 |
| NsiI | ATGCAT | 1 cut(s) | 1228 |
| NspV | TTCGAA | 2 cut(s) | 792, 964 |
| PagI | TCATGA | 2 cut(s) | 145, 1332 |
| PciSI | GCTCTTC | 1 cut(s) | 515 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 774 |
| PctI | GAATGC | 1 cut(s) | 1882 |
| PdmI | GAANNNNTTC | 2 cut(s) | 342, 421 |
| PfoI | TCCNGGA | 1 cut(s) | 1159 |
| PleI | GAGTC | 4 cut(s) | 118, 839, 1267, 1309 |
| PpsI | GAGTC | 4 cut(s) | 118, 839, 1267, 1309 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1340 |
| PshBI | ATTAAT | 1 cut(s) | 362 |
| Psp6I | CCWGG | 3 cut(s) | 586, 736, 1159 |
| PspGI | CCWGG | 3 cut(s) | 586, 736, 1159 |
| PspPI | GGNCC | 2 cut(s) | 543, 893 |
| PstI | CTGCAG | 2 cut(s) | 1183, 1384 |
| PstNI | CAGNNNCTG | 1 cut(s) | 167 |
| PsuI | RGATCY | 1 cut(s) | 824 |
| RsaI | GTAC | 2 cut(s) | 771, 1396 |
| RsaNI | GTAC | 2 cut(s) | 770, 1395 |
| RseI | CAYNNNNRTG | 2 cut(s) | 450, 1951 |
| SapI | GCTCTTC | 1 cut(s) | 515 |
| SaqAI | TTAA | 7 cut(s) | 290, 362, 384, 608, 876, 1221, 1461 |
| Sau3AI | GATC | 6 cut(s) | 454, 508, 824, 996, 1099, 1231 |
| Sau96I | GGNCC | 2 cut(s) | 543, 893 |
| SchI | GAGTC | 4 cut(s) | 119, 839, 1268, 1310 |
| ScrFI | CCNGG | 5 cut(s) | 310, 588, 632, 738, 1161 |
| SduI | GDGCHC | 4 cut(s) | 153, 309, 334, 1872 |
| SfcI | CTRYAG | 2 cut(s) | 1179, 1380 |
| SfuI | TTCGAA | 2 cut(s) | 792, 964 |
| SinI | GGWCC | 1 cut(s) | 543 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 450, 1951 |
| SmlI | CTYRAG | 2 cut(s) | 182, 383 |
| SmoI | CTYRAG | 2 cut(s) | 182, 383 |
| SspMI | CTAG | 4 cut(s) | 135, 236, 596, 1256 |
| StyD4I | CCNGG | 5 cut(s) | 308, 586, 630, 736, 1159 |
| TaaI | ACNGT | 3 cut(s) | 664, 695, 1459 |
| TaiI | ACGT | 2 cut(s) | 247, 949 |
| TaqI | TCGA | 7 cut(s) | 328, 638, 792, 820, 964, 1007, 1040 |
| Tru1I | TTAA | 7 cut(s) | 290, 362, 384, 608, 876, 1221, 1461 |
| Tru9I | TTAA | 7 cut(s) | 290, 362, 384, 608, 876, 1221, 1461 |
| TscAI | CASTG | 3 cut(s) | 545, 1456, 1884 |
| TseFI | GTSAC | 3 cut(s) | 71, 122, 927 |
| TseI | GCWGC | 5 cut(s) | 167, 613, 646, 1178, 1181 |
| Tsp45I | GTSAC | 3 cut(s) | 71, 122, 927 |
| TspDTI | ATGAA | 8 cut(s) | 222, 335, 414, 462, 987, 1208, 1321, 1338 |
| TspGWI | ACGGA | 1 cut(s) | 1449 |
| TspRI | CASTG | 3 cut(s) | 545, 1456, 1884 |
| Vha464I | CTTAAG | 1 cut(s) | 383 |
| VpaK11BI | GGWCC | 1 cut(s) | 543 |
| VspI | ATTAAT | 1 cut(s) | 362 |
| XapI | RAATTY | 4 cut(s) | 103, 591, 867, 960 |
| XbaI | TCTAGA | 2 cut(s) | 595, 1255 |
| XmnI | GAANNNNTTC | 2 cut(s) | 342, 421 |
| XspI | CTAG | 4 cut(s) | 135, 236, 596, 1256 |
| Zsp2I | ATGCAT | 1 cut(s) | 1228 |