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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G56420 |
| fragaria_vesca | FvH4_6g07400 |
| malus_domestica | MD04G1193400.v1.1 |
| prunus_persica | Prupe.6G313500_v2.0.a1 |
| pyrus_communis | pycom04g17140 |
| rosa_chinensis | RchiOBHm_Chr3g0457001 RchiOBHm_Chr5g0001621 |
| rosa_laevigata | RLG00000025253 RLG00000030950 |
| rosa_roxburghii | Rroxscaffold_6G00422280 |
| rosa_rugosa | Rorug03G0018200 Rorug03G0018300 Rorug07G0327900 |
| rosa_samantha | Rh3AG078100 Rh3BG080000 Rh3CG079900 Rh7BG453900 Rh7CG499300 Rh7DG467400 |
| rosa_wichuraiana | Rw3G006700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 59 |
| AccB1I | GGYRCC | 1 cut(s) | 59 |
| AccII | CGCG | 1 cut(s) | 342 |
| AciI | CCGC | 4 cut(s) | 140, 340, 347, 350 |
| AcoI | YGGCCR | 1 cut(s) | 337 |
| AcsI | RAATTY | 1 cut(s) | 487 |
| AcuI | CTGAAG | 2 cut(s) | 137, 612 |
| AfaI | GTAC | 1 cut(s) | 61 |
| AgsI | TTSAA | 4 cut(s) | 224, 314, 499, 613 |
| AjnI | CCWGG | 1 cut(s) | 166 |
| AluBI | AGCT | 6 cut(s) | 97, 115, 196, 220, 560, 581 |
| AluI | AGCT | 6 cut(s) | 97, 115, 196, 220, 560, 581 |
| Alw26I | GTCTC | 1 cut(s) | 48 |
| AoxI | GGCC | 3 cut(s) | 171, 243, 337 |
| ApeKI | GCWGC | 2 cut(s) | 455, 557 |
| ApoI | RAATTY | 1 cut(s) | 487 |
| Asp718I | GGTACC | 1 cut(s) | 59 |
| AspS9I | GGNCC | 1 cut(s) | 171 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 545 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 43, 76 |
| BanI | GGYRCC | 1 cut(s) | 59 |
| BbsI | GAAGAC | 3 cut(s) | 128, 549, 603 |
| BbvI | GCAGC | 2 cut(s) | 467, 569 |
| BccI | CCATC | 2 cut(s) | 50, 555 |
| BciT130I | CCWGG | 1 cut(s) | 168 |
| BcoDI | GTCTC | 1 cut(s) | 48 |
| BisI | GCNGC | 4 cut(s) | 340, 350, 456, 558 |
| BlsI | GCNGC | 4 cut(s) | 341, 351, 457, 559 |
| Bme1390I | CCNGG | 1 cut(s) | 168 |
| BmgT120I | GGNCC | 1 cut(s) | 171 |
| BmiI | GGNNCC | 2 cut(s) | 61, 172 |
| BmrFI | CCNGG | 1 cut(s) | 168 |
| BmsI | GCATC | 3 cut(s) | 58, 193, 358 |
| BpiI | GAAGAC | 3 cut(s) | 128, 549, 603 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 230, 262 |
| BpmI | CTGGAG | 1 cut(s) | 561 |
| BpuEI | CTTGAG | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 1 cut(s) | 167 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 499, 529 |
| BseBI | CCWGG | 1 cut(s) | 168 |
| BseDI | CCNNGG | 1 cut(s) | 167 |
| BseMII | CTCAG | 1 cut(s) | 88 |
| BseRI | GAGGAG | 2 cut(s) | 351, 520 |
| BseXI | GCAGC | 2 cut(s) | 467, 569 |
| Bsh1236I | CGCG | 1 cut(s) | 342 |
| BshFI | GGCC | 3 cut(s) | 173, 245, 339 |
| BshNI | GGYRCC | 1 cut(s) | 59 |
| BsmAI | GTCTC | 1 cut(s) | 48 |
| BsnI | GGCC | 3 cut(s) | 173, 245, 339 |
| Bsp143I | GATC | 1 cut(s) | 84 |
| BspACI | CCGC | 4 cut(s) | 140, 340, 347, 350 |
| BspANI | GGCC | 3 cut(s) | 173, 245, 339 |
| BspCNI | CTCAG | 1 cut(s) | 87 |
| BspFNI | CGCG | 1 cut(s) | 342 |
| BspLI | GGNNCC | 2 cut(s) | 61, 172 |
| BspQI | GCTCTTC | 1 cut(s) | 105 |
| BspT107I | GGYRCC | 1 cut(s) | 59 |
| BssECI | CCNNGG | 1 cut(s) | 167 |
| BssMI | GATC | 1 cut(s) | 84 |
| Bst2UI | CCWGG | 1 cut(s) | 168 |
| Bst4CI | ACNGT | 1 cut(s) | 310 |
| Bst6I | CTCTTC | 2 cut(s) | 105, 497 |
| BstDEI | CTNAG | 3 cut(s) | 74, 209, 249 |
| BstFNI | CGCG | 1 cut(s) | 342 |
| BstKTI | GATC | 1 cut(s) | 87 |
| BstMAI | GTCTC | 1 cut(s) | 48 |
| BstMBI | GATC | 1 cut(s) | 84 |
| BstNI | CCWGG | 1 cut(s) | 168 |
| BstSCI | CCNGG | 1 cut(s) | 166 |
| BstUI | CGCG | 1 cut(s) | 342 |
| BstV1I | GCAGC | 2 cut(s) | 467, 569 |
| BstV2I | GAAGAC | 3 cut(s) | 128, 549, 603 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 136 |
| BsuRI | GGCC | 3 cut(s) | 173, 245, 339 |
| Cfr13I | GGNCC | 1 cut(s) | 171 |
| Csp6I | GTAC | 1 cut(s) | 60 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 316, 351 |
| CviAII | CATG | 1 cut(s) | 470 |
| CviQI | GTAC | 1 cut(s) | 60 |
| DdeI | CTNAG | 3 cut(s) | 74, 209, 249 |
| DpnI | GATC | 1 cut(s) | 86 |
| DpnII | GATC | 1 cut(s) | 84 |
| EaeI | YGGCCR | 1 cut(s) | 337 |
| Eam1104I | CTCTTC | 2 cut(s) | 105, 497 |
| EarI | CTCTTC | 2 cut(s) | 105, 497 |
| EciI | GGCGGA | 1 cut(s) | 155 |
| Eco147I | AGGCCT | 1 cut(s) | 245 |
| Eco57I | CTGAAG | 2 cut(s) | 137, 612 |
| EcoRII | CCWGG | 1 cut(s) | 166 |
| FaeI | CATG | 1 cut(s) | 473 |
| FaiI | YATR | 2 cut(s) | 306, 471 |
| FatI | CATG | 1 cut(s) | 469 |
| Fnu4HI | GCNGC | 4 cut(s) | 340, 350, 456, 558 |
| Fsp4HI | GCNGC | 4 cut(s) | 340, 350, 456, 558 |
| GluI | GCNGC | 4 cut(s) | 340, 350, 456, 558 |
| GsuI | CTGGAG | 1 cut(s) | 561 |
| HaeIII | GGCC | 3 cut(s) | 173, 245, 339 |
| Hin1II | CATG | 1 cut(s) | 473 |
| HinfI | GANTC | 3 cut(s) | 41, 464, 599 |
| HphI | GGTGA | 2 cut(s) | 28, 545 |
| Hpy166II | GTNNAC | 1 cut(s) | 518 |
| Hpy188I | TCNGA | 2 cut(s) | 48, 568 |
| Hpy188III | TCNNGA | 2 cut(s) | 365, 499 |
| Hpy8I | GTNNAC | 1 cut(s) | 518 |
| HpyAV | CCTTC | 2 cut(s) | 235, 469 |
| HpyCH4III | ACNGT | 1 cut(s) | 310 |
| HpyCH4V | TGCA | 3 cut(s) | 206, 327, 557 |
| HpyF3I | CTNAG | 3 cut(s) | 74, 209, 249 |
| Hsp92II | CATG | 1 cut(s) | 473 |
| KpnI | GGTACC | 1 cut(s) | 63 |
| Kzo9I | GATC | 1 cut(s) | 84 |
| LguI | GCTCTTC | 1 cut(s) | 105 |
| LmnI | GCTCC | 1 cut(s) | 217 |
| LpnPI | CCDG | 7 cut(s) | 61, 153, 180, 200, 378, 591, 603 |
| Lsp1109I | GCAGC | 2 cut(s) | 467, 569 |
| LweI | GCATC | 3 cut(s) | 58, 193, 358 |
| MalI | GATC | 1 cut(s) | 86 |
| MboI | GATC | 1 cut(s) | 84 |
| MboII | GAAGA | 9 cut(s) | 3, 41, 122, 130, 133, 514, 554, 605, 608 |
| MluCI | AATT | 3 cut(s) | 267, 329, 487 |
| MlyI | GAGTC | 2 cut(s) | 50, 593 |
| MnlI | CCTC | 5 cut(s) | 256, 369, 372, 498, 585 |
| MseI | TTAA | 3 cut(s) | 80, 132, 266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 134 |
| MspA1I | CMGCKG | 2 cut(s) | 352, 581 |
| MspR9I | CCNGG | 1 cut(s) | 168 |
| MvaI | CCWGG | 1 cut(s) | 168 |
| MvnI | CGCG | 1 cut(s) | 342 |
| NdeII | GATC | 1 cut(s) | 84 |
| NlaIII | CATG | 1 cut(s) | 473 |
| NlaIV | GGNNCC | 2 cut(s) | 61, 172 |
| NmeAIII | GCCGAG | 1 cut(s) | 199 |
| PceI | AGGCCT | 1 cut(s) | 245 |
| PciSI | GCTCTTC | 1 cut(s) | 105 |
| PfeI | GAWTC | 1 cut(s) | 464 |
| PkrI | GCNGC | 4 cut(s) | 341, 351, 457, 559 |
| PleI | GAGTC | 2 cut(s) | 49, 593 |
| PpsI | GAGTC | 2 cut(s) | 49, 593 |
| Psp6I | CCWGG | 1 cut(s) | 166 |
| PspGI | CCWGG | 1 cut(s) | 166 |
| PspN4I | GGNNCC | 2 cut(s) | 61, 172 |
| PspPI | GGNCC | 1 cut(s) | 171 |
| PvuII | CAGCTG | 1 cut(s) | 581 |
| RsaI | GTAC | 1 cut(s) | 61 |
| RsaNI | GTAC | 1 cut(s) | 60 |
| RseI | CAYNNNNRTG | 1 cut(s) | 134 |
| SapI | GCTCTTC | 1 cut(s) | 105 |
| SaqAI | TTAA | 3 cut(s) | 80, 132, 266 |
| SatI | GCNGC | 4 cut(s) | 340, 350, 456, 558 |
| Sau3AI | GATC | 1 cut(s) | 84 |
| Sau96I | GGNCC | 1 cut(s) | 171 |
| SchI | GAGTC | 2 cut(s) | 50, 593 |
| ScrFI | CCNGG | 1 cut(s) | 168 |
| SfaNI | GCATC | 3 cut(s) | 58, 193, 358 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 134 |
| SmlI | CTYRAG | 1 cut(s) | 236 |
| SmoI | CTYRAG | 1 cut(s) | 236 |
| Sse9I | AATT | 3 cut(s) | 267, 329, 487 |
| SseBI | AGGCCT | 1 cut(s) | 245 |
| SsiI | CCGC | 4 cut(s) | 140, 340, 347, 350 |
| StuI | AGGCCT | 1 cut(s) | 245 |
| StyD4I | CCNGG | 1 cut(s) | 166 |
| TaaI | ACNGT | 1 cut(s) | 310 |
| TasI | AATT | 3 cut(s) | 267, 329, 487 |
| TauI | GCSGC | 2 cut(s) | 342, 352 |
| TfiI | GAWTC | 1 cut(s) | 464 |
| Tru1I | TTAA | 3 cut(s) | 80, 132, 266 |
| Tru9I | TTAA | 3 cut(s) | 80, 132, 266 |
| TseI | GCWGC | 2 cut(s) | 455, 557 |
| TspDTI | ATGAA | 5 cut(s) | 65, 123, 390, 540, 585 |
| XapI | RAATTY | 1 cut(s) | 487 |