DnaJ molecular chaperone homology domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G18140 |
| fragaria_vesca | FvH4_1g28130 FvH4_1g28130 |
| malus_domestica | MD12G1003800.v1.1 |
| prunus_persica | Prupe.7G004300_v2.0.a1 |
| pyrus_communis | pycom12g00320 |
| rosa_chinensis | RchiOBHm_Chr3g0497071 |
| rosa_laevigata | RLG00000022482 |
| rosa_multiflora | Rmu_co8330937.1_g000001 Rmu_sc0011396.1_g000005 Rmu_ssc0000003.1_g000038 |
| rosa_roxburghii | Rroxscaffold_6G00388410 |
| rosa_rugosa | Rorug03G0289400 |
| rosa_samantha | Rh3AG333900 Rh3BG371000 Rh3CG367900 Rh3DG368900 |
| rosa_wichuraiana | Rw3G029310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 59 |
| AciI | CCGC | 2 cut(s) | 39, 42 |
| AclWI | GGATC | 3 cut(s) | 506, 690, 703 |
| AcoI | YGGCCR | 1 cut(s) | 220 |
| AcsI | RAATTY | 2 cut(s) | 425, 479 |
| AcuI | CTGAAG | 4 cut(s) | 363, 534, 625, 627 |
| AdeI | CACNNNGTG | 2 cut(s) | 822, 938 |
| AfaI | GTAC | 1 cut(s) | 142 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 38, 62 |
| AgsI | TTSAA | 4 cut(s) | 355, 431, 485, 988 |
| AjnI | CCWGG | 2 cut(s) | 15, 398 |
| AluBI | AGCT | 4 cut(s) | 13, 341, 468, 973 |
| AluI | AGCT | 4 cut(s) | 13, 341, 468, 973 |
| Alw21I | GWGCWC | 1 cut(s) | 943 |
| Alw26I | GTCTC | 1 cut(s) | 535 |
| AlwI | GGATC | 3 cut(s) | 506, 690, 703 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 16 |
| AoxI | GGCC | 4 cut(s) | 207, 220, 247, 729 |
| ApeKI | GCWGC | 2 cut(s) | 10, 861 |
| ApoI | RAATTY | 2 cut(s) | 425, 479 |
| AspLEI | GCGC | 1 cut(s) | 10 |
| AspS9I | GGNCC | 3 cut(s) | 23, 207, 247 |
| AsuC2I | CCSGG | 1 cut(s) | 57 |
| AsuHPI | GGTGA | 2 cut(s) | 305, 895 |
| AvaII | GGWCC | 1 cut(s) | 23 |
| BamHI | GGATCC | 1 cut(s) | 695 |
| BanI | GGYRCC | 1 cut(s) | 59 |
| Bbv12I | GWGCWC | 1 cut(s) | 943 |
| BbvI | GCAGC | 2 cut(s) | 22, 873 |
| BccI | CCATC | 3 cut(s) | 35, 41, 721 |
| BceAI | ACGGC | 2 cut(s) | 235, 253 |
| BciT130I | CCWGG | 2 cut(s) | 17, 400 |
| BciVI | GTATCC | 2 cut(s) | 371, 679 |
| BcnI | CCSGG | 1 cut(s) | 57 |
| BcoDI | GTCTC | 1 cut(s) | 535 |
| BfmI | CTRYAG | 1 cut(s) | 469 |
| BfuI | GTATCC | 2 cut(s) | 371, 679 |
| BglII | AGATCT | 1 cut(s) | 656 |
| BisI | GCNGC | 4 cut(s) | 11, 40, 43, 862 |
| BlsI | GCNGC | 4 cut(s) | 12, 41, 44, 863 |
| Bme1390I | CCNGG | 3 cut(s) | 17, 57, 400 |
| Bme18I | GGWCC | 1 cut(s) | 23 |
| BmgT120I | GGNCC | 3 cut(s) | 23, 207, 247 |
| BmiI | GGNNCC | 5 cut(s) | 24, 25, 61, 637, 697 |
| BmrFI | CCNGG | 3 cut(s) | 17, 57, 400 |
| BmsI | GCATC | 1 cut(s) | 742 |
| BpuEI | CTTGAG | 1 cut(s) | 321 |
| BpuMI | CCSGG | 1 cut(s) | 57 |
| BsaJI | CCNNGG | 1 cut(s) | 55 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 124, 154, 606, 636, 790, 820 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 38, 62 |
| Bse118I | RCCGGY | 2 cut(s) | 62, 147 |
| Bse1I | ACTGG | 1 cut(s) | 445 |
| Bse3DI | GCAATG | 1 cut(s) | 52 |
| BseBI | CCWGG | 2 cut(s) | 17, 400 |
| BseDI | CCNNGG | 1 cut(s) | 55 |
| BseGI | GGATG | 2 cut(s) | 27, 757 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 38, 62 |
| BseMI | GCAATG | 1 cut(s) | 52 |
| BseMII | CTCAG | 1 cut(s) | 419 |
| BseNI | ACTGG | 1 cut(s) | 445 |
| BseRI | GAGGAG | 1 cut(s) | 259 |
| BseXI | GCAGC | 2 cut(s) | 22, 873 |
| BseYI | CCCAGC | 1 cut(s) | 244 |
| BshFI | GGCC | 4 cut(s) | 209, 222, 249, 731 |
| BshNI | GGYRCC | 1 cut(s) | 59 |
| BsiHKAI | GWGCWC | 1 cut(s) | 943 |
| BsiSI | CCGG | 3 cut(s) | 57, 63, 148 |
| BslFI | GGGAC | 1 cut(s) | 9 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 38, 62 |
| BsmAI | GTCTC | 1 cut(s) | 535 |
| BsmFI | GGGAC | 1 cut(s) | 9 |
| BsnI | GGCC | 4 cut(s) | 209, 222, 249, 731 |
| Bsp1286I | GDGCHC | 1 cut(s) | 943 |
| Bsp143I | GATC | 3 cut(s) | 498, 656, 695 |
| BspACI | CCGC | 2 cut(s) | 39, 42 |
| BspANI | GGCC | 4 cut(s) | 209, 222, 249, 731 |
| BspCNI | CTCAG | 1 cut(s) | 418 |
| BspLI | GGNNCC | 5 cut(s) | 24, 25, 61, 637, 697 |
| BspPI | GGATC | 3 cut(s) | 506, 690, 703 |
| BspT107I | GGYRCC | 1 cut(s) | 59 |
| BsrDI | GCAATG | 1 cut(s) | 52 |
| BsrFI | RCCGGY | 2 cut(s) | 62, 147 |
| BsrI | ACTGG | 1 cut(s) | 445 |
| BssAI | RCCGGY | 2 cut(s) | 62, 147 |
| BssECI | CCNNGG | 1 cut(s) | 55 |
| BssMI | GATC | 3 cut(s) | 498, 656, 695 |
| Bst2UI | CCWGG | 2 cut(s) | 17, 400 |
| Bst4CI | ACNGT | 1 cut(s) | 455 |
| Bst6I | CTCTTC | 2 cut(s) | 121, 339 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 529, 920 |
| BstC8I | GCNNGC | 2 cut(s) | 224, 242 |
| BstDEI | CTNAG | 2 cut(s) | 405, 653 |
| BstF5I | GGATG | 2 cut(s) | 27, 757 |
| BstHHI | GCGC | 1 cut(s) | 10 |
| BstKTI | GATC | 3 cut(s) | 501, 659, 698 |
| BstMAI | GTCTC | 1 cut(s) | 535 |
| BstMBI | GATC | 3 cut(s) | 498, 656, 695 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 51, 246, 255, 529, 920 |
| BstNI | CCWGG | 2 cut(s) | 17, 400 |
| BstSCI | CCNGG | 3 cut(s) | 15, 55, 398 |
| BstSFI | CTRYAG | 1 cut(s) | 469 |
| BstV1I | GCAGC | 2 cut(s) | 22, 873 |
| BstX2I | RGATCY | 3 cut(s) | 498, 656, 695 |
| BstYI | RGATCY | 3 cut(s) | 498, 656, 695 |
| BsuI | GTATCC | 2 cut(s) | 371, 679 |
| BsuRI | GGCC | 4 cut(s) | 209, 222, 249, 731 |
| BtsCI | GGATG | 2 cut(s) | 27, 757 |
| BtsI | GCAGTG | 1 cut(s) | 627 |
| BtsIMutI | CAGTG | 4 cut(s) | 438, 460, 627, 649 |
| Cac8I | GCNNGC | 2 cut(s) | 224, 242 |
| CaiI | CAGNNNCTG | 1 cut(s) | 16 |
| CfoI | GCGC | 1 cut(s) | 10 |
| Cfr10I | RCCGGY | 2 cut(s) | 62, 147 |
| Cfr13I | GGNCC | 3 cut(s) | 23, 207, 247 |
| Csp6I | GTAC | 1 cut(s) | 141 |
| CviAII | CATG | 7 cut(s) | 105, 204, 211, 260, 560, 783, 892 |
| CviQI | GTAC | 1 cut(s) | 141 |
| DdeI | CTNAG | 2 cut(s) | 405, 653 |
| DpnI | GATC | 3 cut(s) | 500, 658, 697 |
| DpnII | GATC | 3 cut(s) | 498, 656, 695 |
| DraIII | CACNNNGTG | 2 cut(s) | 822, 938 |
| EaeI | YGGCCR | 1 cut(s) | 220 |
| Eam1104I | CTCTTC | 2 cut(s) | 121, 339 |
| EarI | CTCTTC | 2 cut(s) | 121, 339 |
| Eco47I | GGWCC | 1 cut(s) | 23 |
| Eco57I | CTGAAG | 4 cut(s) | 363, 534, 625, 627 |
| EcoO109I | RGGNCCY | 1 cut(s) | 23 |
| EcoRII | CCWGG | 2 cut(s) | 15, 398 |
| FaeI | CATG | 7 cut(s) | 108, 207, 214, 263, 563, 786, 895 |
| FaqI | GGGAC | 1 cut(s) | 9 |
| FatI | CATG | 7 cut(s) | 104, 203, 210, 259, 559, 782, 891 |
| FauNDI | CATATG | 2 cut(s) | 373, 583 |
| Fnu4HI | GCNGC | 4 cut(s) | 11, 40, 43, 862 |
| FokI | GGATG | 2 cut(s) | 14, 764 |
| Fsp4HI | GCNGC | 4 cut(s) | 11, 40, 43, 862 |
| GlaI | GCGC | 1 cut(s) | 9 |
| GluI | GCNGC | 4 cut(s) | 11, 40, 43, 862 |
| GsaI | CCCAGC | 1 cut(s) | 248 |
| HaeIII | GGCC | 4 cut(s) | 209, 222, 249, 731 |
| HapII | CCGG | 3 cut(s) | 57, 63, 148 |
| HhaI | GCGC | 1 cut(s) | 10 |
| Hin1II | CATG | 7 cut(s) | 108, 207, 214, 263, 563, 786, 895 |
| Hin6I | GCGC | 1 cut(s) | 8 |
| HinP1I | GCGC | 1 cut(s) | 8 |
| HinfI | GANTC | 3 cut(s) | 332, 379, 403 |
| HpaII | CCGG | 3 cut(s) | 57, 63, 148 |
| HphI | GGTGA | 2 cut(s) | 305, 895 |
| Hpy166II | GTNNAC | 1 cut(s) | 153 |
| Hpy188I | TCNGA | 1 cut(s) | 274 |
| Hpy188III | TCNNGA | 2 cut(s) | 280, 355 |
| Hpy8I | GTNNAC | 1 cut(s) | 153 |
| Hpy99I | CGWCG | 2 cut(s) | 187, 190 |
| HpyAV | CCTTC | 3 cut(s) | 305, 605, 649 |
| HpyCH4III | ACNGT | 1 cut(s) | 455 |
| HpyCH4IV | ACGT | 1 cut(s) | 167 |
| HpyCH4V | TGCA | 7 cut(s) | 532, 625, 685, 782, 836, 914, 923 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 51, 246, 255, 529, 920 |
| HpyF3I | CTNAG | 2 cut(s) | 405, 653 |
| HpySE526I | ACGT | 1 cut(s) | 167 |
| Hsp92II | CATG | 7 cut(s) | 108, 207, 214, 263, 563, 786, 895 |
| HspAI | GCGC | 1 cut(s) | 8 |
| KflI | GGGWCCC | 1 cut(s) | 23 |
| Kzo9I | GATC | 3 cut(s) | 498, 656, 695 |
| LmnI | GCTCC | 2 cut(s) | 18, 465 |
| Lsp1109I | GCAGC | 2 cut(s) | 22, 873 |
| LweI | GCATC | 1 cut(s) | 742 |
| MaeII | ACGT | 1 cut(s) | 167 |
| MalI | GATC | 3 cut(s) | 500, 658, 697 |
| MboI | GATC | 3 cut(s) | 498, 656, 695 |
| MboII | GAAGA | 5 cut(s) | 135, 138, 356, 581, 620 |
| MflI | RGATCY | 3 cut(s) | 498, 656, 695 |
| MhlI | GDGCHC | 1 cut(s) | 943 |
| MluCI | AATT | 4 cut(s) | 79, 425, 479, 777 |
| MlyI | GAGTC | 1 cut(s) | 397 |
| MmeI | TCCRAC | 1 cut(s) | 729 |
| MseI | TTAA | 3 cut(s) | 216, 423, 969 |
| MslI | CAYNNNNRTG | 4 cut(s) | 175, 202, 318, 564 |
| MspA1I | CMGCKG | 1 cut(s) | 39 |
| MspI | CCGG | 3 cut(s) | 57, 63, 148 |
| MspR9I | CCNGG | 3 cut(s) | 17, 57, 400 |
| MvaI | CCWGG | 2 cut(s) | 17, 400 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 51, 246, 255, 529, 920 |
| NciI | CCSGG | 1 cut(s) | 57 |
| NdeI | CATATG | 2 cut(s) | 373, 583 |
| NdeII | GATC | 3 cut(s) | 498, 656, 695 |
| NlaIII | CATG | 7 cut(s) | 108, 207, 214, 263, 563, 786, 895 |
| NlaIV | GGNNCC | 5 cut(s) | 24, 25, 61, 637, 697 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 173, 182 |
| PfeI | GAWTC | 2 cut(s) | 332, 379 |
| PkrI | GCNGC | 4 cut(s) | 12, 41, 44, 863 |
| PleI | GAGTC | 1 cut(s) | 397 |
| PpsI | GAGTC | 1 cut(s) | 397 |
| PpuMI | RGGWCCY | 1 cut(s) | 23 |
| Psp5II | RGGWCCY | 1 cut(s) | 23 |
| Psp6I | CCWGG | 2 cut(s) | 15, 398 |
| PspFI | CCCAGC | 1 cut(s) | 244 |
| PspGI | CCWGG | 2 cut(s) | 15, 398 |
| PspN4I | GGNNCC | 5 cut(s) | 24, 25, 61, 637, 697 |
| PspPI | GGNCC | 3 cut(s) | 23, 207, 247 |
| PspPPI | RGGWCCY | 1 cut(s) | 23 |
| PstNI | CAGNNNCTG | 1 cut(s) | 16 |
| PsuI | RGATCY | 3 cut(s) | 498, 656, 695 |
| RsaI | GTAC | 1 cut(s) | 142 |
| RsaNI | GTAC | 1 cut(s) | 141 |
| RseI | CAYNNNNRTG | 4 cut(s) | 175, 202, 318, 564 |
| SaqAI | TTAA | 3 cut(s) | 216, 423, 969 |
| SatI | GCNGC | 4 cut(s) | 11, 40, 43, 862 |
| Sau3AI | GATC | 3 cut(s) | 498, 656, 695 |
| Sau96I | GGNCC | 3 cut(s) | 23, 207, 247 |
| SchI | GAGTC | 1 cut(s) | 397 |
| ScrFI | CCNGG | 3 cut(s) | 17, 57, 400 |
| SduI | GDGCHC | 1 cut(s) | 943 |
| SfaNI | GCATC | 1 cut(s) | 742 |
| SfcI | CTRYAG | 1 cut(s) | 469 |
| SgrAI | CRCCGGYG | 1 cut(s) | 147 |
| SinI | GGWCC | 1 cut(s) | 23 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 175, 202, 318, 564 |
| SmlI | CTYRAG | 1 cut(s) | 336 |
| SmoI | CTYRAG | 1 cut(s) | 336 |
| Sse9I | AATT | 4 cut(s) | 79, 425, 479, 777 |
| SsiI | CCGC | 2 cut(s) | 39, 42 |
| StyD4I | CCNGG | 3 cut(s) | 15, 55, 398 |
| TaaI | ACNGT | 1 cut(s) | 455 |
| TaiI | ACGT | 1 cut(s) | 170 |
| TaqI | TCGA | 1 cut(s) | 905 |
| TasI | AATT | 4 cut(s) | 79, 425, 479, 777 |
| TauI | GCSGC | 2 cut(s) | 42, 45 |
| TfiI | GAWTC | 2 cut(s) | 332, 379 |
| Tru1I | TTAA | 3 cut(s) | 216, 423, 969 |
| Tru9I | TTAA | 3 cut(s) | 216, 423, 969 |
| TscAI | CASTG | 4 cut(s) | 445, 460, 627, 649 |
| TseI | GCWGC | 2 cut(s) | 10, 861 |
| TspDTI | ATGAA | 3 cut(s) | 405, 582, 612 |
| TspGWI | ACGGA | 1 cut(s) | 353 |
| TspRI | CASTG | 4 cut(s) | 445, 460, 627, 649 |
| VpaK11BI | GGWCC | 1 cut(s) | 23 |
| XapI | RAATTY | 2 cut(s) | 425, 479 |