Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0009055

Physical Location & Seq

Genomic Coordinates Reverse (-)

2207062 .. 2209866

Gene Structure 2805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G015000.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGAATATAAAGTATGGTCTTGATCCCACTTCGGAGGAATCTGAGGGCCGACCTGAATGTGAAGTTAACAAAACAAGGATTGATGTTGAAAGCCGTCACCCTTCAGAATATCTGGTTCTAAGCAGTGTCAGCAATACGCTAGATTGCGAGGGTTTTCTTAGTTTAGATGACTATGAAGCCAAGTGCCTCTACCTTAAATCCGAAAACCCATGTGTCTCTCAAGGCTATATTGACTATCTTTTCATTTTCTATTGCAATTTTGAAAGTTTTCCTCTTTTGGGTTATTTTCTTATGTTTTTGTGGCTCCTGGTTTTGTTCTATGTGTTGGGGAATACAGCTTCTGAATACTTTTGTTCTTCGCTGGAAAATCTATCAAGGCTACTAAAATTGTCCCCTACAATTGCTGGGGTCACTCTGCTCTCTCTTGGCAATGGAGCCCCTGATGTTTTTTCTAGTCTTGTTTCGTTTATGGGCGGTGGGACAGGCGAAATTGGTCTTAATACAATTTTGGGGGGAGCTTCCTTTGTATCATGTGTTGTGGTTGGAATCATAAGCATTTCAATGCGCCAGAGGCGTATTCGAGTTAAGAAATGTGACTTTGTGAGAGATATTTGCTTCTACCTTTTGGTCATTCTGTTCTTGGTTCTGATCTTGATTCAGAGTGAAATAGATGTGTGGGCTGCAATGGCTTTTGCTTCAATGTATATTGTTTATGTGATTGTGGTTTACATCTCACATGCTCATTGGAAGAATGCTGCTGGGGATATCAGTGAATCGAACTGTACTTCCACCAATGACACTGACTTGAGTGTACCAATTCTTAGCAACATGGAAAAGGAAGAGCTTAGTGCTGCAGAGGAAGGAGCTGTAGAAGGCAGTTCTGAAGTACTAGAAGTCAAGAAATGCTGCTCTAATCTTAGATCATCGGCTTCTTGTCGTATGGTTTTCTTCGTACTCGAGATGCCTCTTTATCTGCCAAGGAGATTGACTATTCCTGTTGTTTGTGAAGAGAAATGGTCTAAGCCGTATGCAGTTGCTTCAGTGACACTAGCACCAGTGCTATTGTCAATTCTTTGGAACCATCAATTTGACCGTGTTAGCTTCATGACAAGCTTGGTGATCTATATTACTGGATTGATTTTTGGAGTCACTTTTGGTCTTGTTGCATTTGTGACAACAGAGAAATCAATCCCACCAAAGAATTGCTTATTTCCTTGGCTTGTTGCAGGGTTTCTAATGAGTGTTACTTGGAGTTATTTTACAGCTCAGGAATTGGTGGGTTTGTTAGTTTCAGTAGGGTACTTATTAGGTGTAAGTCCTTCTATCTTAGGGCTAACAGTCCTTGCTTGGGGTAACTCATTTGGAGATTTGATTACCAATTTGACAATGGCTTTGAATGGTGGACCTGAAGGAACTCAAATTGCATTTGCAGCCTGTTATGCTGGTCCCATCTTCAACATTCTGTTTGGATTGGGCTTATCCCTTGTTGGCTCTGCTTGGTCTACATATCCATCACCTCTTGTGCTCCGCAGAGATCCATACCTGTTGGAGACAGTGTGTTTCTTAGCAGGAGGCTTGCTTTGGGCACTTGTGGTTCTACCAAGGAGAAATATGAGGCTTGATGGGGTTTTGGGAGGGGGGCTTTTAGTTGTATACGTCAGCTCTATGTCTTTGAGGTTGATTCAAACACTTGGGTCTCTCAAGCTTCAAAAAGAGATAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0051179 GO:0051234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_Ca_ex

Protein Analysis

575

Amino Acids

63.11

Weight (kDa)

5.02

Isoelectric Point (pI)

44.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G17850 AT5G17850
fragaria_vesca	FvH4_2g05650 FvH4_6g03400
malus_domestica	MD12G1011800.v1.1 MD14G1008300.v1.1 MD14G1008700.v1.1
prunus_persica	Prupe.7G015000_v2.0.a1 Prupe.7G015000_v2.0.a1
pyrus_communis	pycom12g00910 pycom14g00650 pycom14g00710
rosa_chinensis	RchiOBHm_Chr3g0496041
rosa_laevigata	RLG00000022568
rosa_multiflora	Rmu_sc0005781.1_g000025
rosa_roxburghii	Rroxscaffold_6G00389620
rosa_rugosa	Rorug03G0279200
rosa_samantha	Rh3AG326000 Rh3BG362400 Rh3CG358400 Rh3DG361800
rosa_wichuraiana	Rw3G028540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	1502, 1653
AciI	CCGC	2 cut(s)	474, 1528
AclWI	GGATC	2 cut(s)	17, 1529
AcuI	CTGAAG	4 cut(s)	87, 903, 1023, 1428
AfaI	GTAC	5 cut(s)	784, 813, 888, 954, 1301
AfiI	CCNNNNNNNGG	2 cut(s)	278, 1348
AgsI	TTSAA	8 cut(s)	89, 263, 561, 699, 1396, 1456, 1685, 1709
AjnI	CCWGG	1 cut(s)	306
AloI	GAACNNNNNNTCC	2 cut(s)	770, 802
AluBI	AGCT	9 cut(s)	338, 518, 844, 866, 1101, 1113, 1265, 1662, 1705
AluI	AGCT	9 cut(s)	338, 518, 844, 866, 1101, 1113, 1265, 1662, 1705
Alw21I	GWGCWC	1 cut(s)	1527
Alw26I	GTCTC	3 cut(s)	220, 1544, 1701
AlwI	GGATC	2 cut(s)	17, 1529
AlwNI	CAGNNNCTG	1 cut(s)	341
Ama87I	CYCGRG	1 cut(s)	956
AoxI	GGCC	1 cut(s)	46
ApeKI	GCWGC	5 cut(s)	680, 755, 851, 906, 1430
ArsI	GACNNNNNNTTYG	2 cut(s)	1375, 1407
Asp700I	GAANNNNTTC	1 cut(s)	267
AspLEI	GCGC	1 cut(s)	567
AspS9I	GGNCC	3 cut(s)	46, 1403, 1445
AsuHPI	GGTGA	3 cut(s)	89, 1129, 1506
AvaI	CYCGRG	1 cut(s)	956
AvaII	GGWCC	2 cut(s)	1403, 1445
BaeGI	GKGCMC	1 cut(s)	1588
BanII	GRGCYC	1 cut(s)	439
Bbv12I	GWGCWC	1 cut(s)	1527
BbvI	GCAGC	5 cut(s)	667, 742, 838, 893, 1442
BccI	CCATC	4 cut(s)	1089, 1457, 1519, 1616
BceAI	ACGGC	2 cut(s)	78, 1009
BciT130I	CCWGG	1 cut(s)	308
BcoDI	GTCTC	3 cut(s)	220, 1544, 1701
BfaI	CTAG	4 cut(s)	140, 453, 890, 1049
BfmI	CTRYAG	2 cut(s)	852, 867
BisI	GCNGC	5 cut(s)	681, 756, 852, 907, 1431
BlsI	GCNGC	5 cut(s)	682, 757, 853, 908, 1432
BmcAI	AGTACT	1 cut(s)	888
Bme1390I	CCNGG	1 cut(s)	308
Bme18I	GGWCC	2 cut(s)	1403, 1445
BmeT110I	CYCGRG	1 cut(s)	956
BmgT120I	GGNCC	3 cut(s)	46, 1403, 1445
BmiI	GGNNCC	4 cut(s)	305, 436, 1079, 1447
BmrFI	CCNGG	1 cut(s)	308
BmsI	GCATC	1 cut(s)	951
Bpu10I	CCTNAGC	1 cut(s)	1266
BpuEI	CTTGAG	3 cut(s)	204, 826, 1685
BsaI	GGTCTC	1 cut(s)	1701
BsaJI	CCNNGG	3 cut(s)	977, 1214, 1601
BsaXI	ACNNNNNCTCC	2 cut(s)	1541, 1571
Bsc4I	CCNNNNNNNGG	2 cut(s)	278, 1348
Bse1I	ACTGG	2 cut(s)	1055, 1135
Bse3DI	GCAATG	2 cut(s)	436, 690
BseBI	CCWGG	1 cut(s)	308
BseDI	CCNNGG	3 cut(s)	977, 1214, 1601
BseLI	CCNNNNNNNGG	2 cut(s)	278, 1348
BseMI	GCAATG	2 cut(s)	436, 690
BseMII	CTCAG	2 cut(s)	33, 1280
BseNI	ACTGG	2 cut(s)	1055, 1135
BseSI	GKGCMC	1 cut(s)	1588
BseXI	GCAGC	5 cut(s)	667, 742, 838, 893, 1442
BseYI	CCCAGC	2 cut(s)	404, 758
BshFI	GGCC	1 cut(s)	48
BsiHKAI	GWGCWC	1 cut(s)	1527
BsiHKCI	CYCGRG	1 cut(s)	956
BslFI	GGGAC	3 cut(s)	376, 493, 1431
BslI	CCNNNNNNNGG	2 cut(s)	278, 1348
BsmAI	GTCTC	3 cut(s)	220, 1544, 1701
BsmFI	GGGAC	3 cut(s)	376, 493, 1431
BsmI	GAATGC	1 cut(s)	757
BsnI	GGCC	1 cut(s)	48
Bso31I	GGTCTC	1 cut(s)	1701
BsoBI	CYCGRG	1 cut(s)	956
Bsp1286I	GDGCHC	3 cut(s)	439, 1527, 1588
Bsp143I	GATC	5 cut(s)	22, 648, 920, 1119, 1534
BspACI	CCGC	2 cut(s)	474, 1528
BspANI	GGCC	1 cut(s)	48
BspCNI	CTCAG	2 cut(s)	34, 1279
BspHI	TCATGA	1 cut(s)	1104
BspLI	GGNNCC	4 cut(s)	305, 436, 1079, 1447
BspMAI	CTGCAG	1 cut(s)	856
BspPI	GGATC	2 cut(s)	17, 1529
BspQI	GCTCTTC	1 cut(s)	834
BspTNI	GGTCTC	1 cut(s)	1701
BsrDI	GCAATG	2 cut(s)	436, 690
BsrI	ACTGG	2 cut(s)	1055, 1135
BssECI	CCNNGG	3 cut(s)	977, 1214, 1601
BssMI	GATC	5 cut(s)	22, 648, 920, 1119, 1534
BssNAI	GTATAC	1 cut(s)	1654
BssT1I	CCWWGG	3 cut(s)	977, 1214, 1601
Bst1107I	GTATAC	1 cut(s)	1654
Bst2UI	CCWGG	1 cut(s)	308
Bst4CI	ACNGT	4 cut(s)	782, 1094, 1339, 1555
Bst6I	CTCTTC	2 cut(s)	834, 1002
BstC8I	GCNNGC	1 cut(s)	1577
BstHHI	GCGC	1 cut(s)	567
BstKTI	GATC	5 cut(s)	25, 651, 923, 1122, 1537
BstMAI	GTCTC	3 cut(s)	220, 1544, 1701
BstMBI	GATC	5 cut(s)	22, 648, 920, 1119, 1534
BstMWI	GCNNNNNNNGC	5 cut(s)	129, 571, 686, 1430, 1439
BstNI	CCWGG	1 cut(s)	308
BstNSI	RCATGY	1 cut(s)	740
BstSCI	CCNGG	1 cut(s)	306
BstSFI	CTRYAG	2 cut(s)	852, 867
BstSLI	GKGCMC	1 cut(s)	1588
BstV1I	GCAGC	5 cut(s)	667, 742, 838, 893, 1442
BstX2I	RGATCY	1 cut(s)	1534
BstYI	RGATCY	1 cut(s)	1534
BstZ17I	GTATAC	1 cut(s)	1654
BsuRI	GGCC	1 cut(s)	48
BtsI	GCAGTG	1 cut(s)	130
BtsIMutI	CAGTG	6 cut(s)	130, 775, 798, 1047, 1062, 1560
Cac8I	GCNNGC	1 cut(s)	1577
CaiI	CAGNNNCTG	1 cut(s)	341
CciI	TCATGA	1 cut(s)	1104
CfoI	GCGC	1 cut(s)	567
Cfr13I	GGNCC	3 cut(s)	46, 1403, 1445
Csp6I	GTAC	5 cut(s)	783, 812, 887, 953, 1300
CviAII	CATG	5 cut(s)	210, 531, 737, 829, 1105
CviQI	GTAC	5 cut(s)	783, 812, 887, 953, 1300
DpnI	GATC	5 cut(s)	24, 650, 922, 1121, 1536
DpnII	GATC	5 cut(s)	22, 648, 920, 1119, 1534
Eam1104I	CTCTTC	2 cut(s)	834, 1002
EarI	CTCTTC	2 cut(s)	834, 1002
Eco130I	CCWWGG	3 cut(s)	977, 1214, 1601
Eco24I	GRGCYC	1 cut(s)	439
Eco31I	GGTCTC	1 cut(s)	1701
Eco32I	GATATC	1 cut(s)	766
Eco47I	GGWCC	2 cut(s)	1403, 1445
Eco57I	CTGAAG	4 cut(s)	87, 903, 1023, 1428
Eco88I	CYCGRG	1 cut(s)	956
EcoRII	CCWGG	1 cut(s)	306
EcoRV	GATATC	1 cut(s)	766
EcoT14I	CCWWGG	3 cut(s)	977, 1214, 1601
EcoT38I	GRGCYC	1 cut(s)	439
ErhI	CCWWGG	3 cut(s)	977, 1214, 1601
FaeI	CATG	5 cut(s)	213, 534, 740, 832, 1108
FalI	AAGNNNNNCTT	2 cut(s)	1190, 1222
FaqI	GGGAC	3 cut(s)	376, 493, 1431
FatI	CATG	5 cut(s)	209, 530, 736, 828, 1104
FblI	GTMKAC	2 cut(s)	1502, 1653
Fnu4HI	GCNGC	5 cut(s)	681, 756, 852, 907, 1431
FriOI	GRGCYC	1 cut(s)	439
Fsp4HI	GCNGC	5 cut(s)	681, 756, 852, 907, 1431
FspBI	CTAG	4 cut(s)	140, 453, 890, 1049
GlaI	GCGC	1 cut(s)	566
GluI	GCNGC	5 cut(s)	681, 756, 852, 907, 1431
GsaI	CCCAGC	2 cut(s)	408, 762
HaeIII	GGCC	1 cut(s)	48
HhaI	GCGC	1 cut(s)	567
Hin1II	CATG	5 cut(s)	213, 534, 740, 832, 1108
Hin6I	GCGC	1 cut(s)	565
HinP1I	GCGC	1 cut(s)	565
HincII	GTYRAC	1 cut(s)	67
HindII	GTYRAC	1 cut(s)	67
HindIII	AAGCTT	2 cut(s)	1111, 1703
HinfI	GANTC	6 cut(s)	38, 546, 655, 773, 1146, 1681
HpaI	GTTAAC	1 cut(s)	67
HphI	GGTGA	3 cut(s)	89, 1129, 1506
Hpy166II	GTNNAC	6 cut(s)	67, 727, 812, 1403, 1503, 1654
Hpy188I	TCNGA	8 cut(s)	34, 43, 106, 202, 343, 648, 660, 883
Hpy188III	TCNNGA	6 cut(s)	20, 652, 898, 958, 1105, 1268
Hpy8I	GTNNAC	6 cut(s)	67, 727, 812, 1403, 1503, 1654
HpyAV	CCTTC	5 cut(s)	111, 854, 866, 1329, 1403
HpyCH4III	ACNGT	4 cut(s)	782, 1094, 1339, 1555
HpyCH4IV	ACGT	1 cut(s)	1656
HpyCH4V	TGCA	8 cut(s)	255, 683, 854, 1031, 1166, 1226, 1424, 1430
HpyF10VI	GCNNNNNNNGC	5 cut(s)	129, 571, 686, 1430, 1439
HpySE526I	ACGT	1 cut(s)	1656
Hsp92II	CATG	5 cut(s)	213, 534, 740, 832, 1108
HspAI	GCGC	1 cut(s)	565
KspAI	GTTAAC	1 cut(s)	67
Kzo9I	GATC	5 cut(s)	22, 648, 920, 1119, 1534
LguI	GCTCTTC	1 cut(s)	834
LmnI	GCTCC	5 cut(s)	309, 434, 515, 863, 1530
Lsp1109I	GCAGC	5 cut(s)	667, 742, 838, 893, 1442
LweI	GCATC	1 cut(s)	951
MaeI	CTAG	4 cut(s)	140, 453, 890, 1049
MaeII	ACGT	1 cut(s)	1656
MaeIII	GTNAC	8 cut(s)	95, 409, 593, 1042, 1147, 1171, 1243, 1352
MalI	GATC	5 cut(s)	24, 650, 922, 1121, 1536
MboI	GATC	5 cut(s)	22, 648, 920, 1119, 1534
MboII	GAAGA	6 cut(s)	348, 760, 851, 940, 1019, 1444
MfeI	CAATTG	1 cut(s)	399
MflI	RGATCY	1 cut(s)	1534
MhlI	GDGCHC	3 cut(s)	439, 1527, 1588
MlyI	GAGTC	1 cut(s)	1155
MmeI	TCCRAC	2 cut(s)	523, 1527
MroXI	GAANNNNTTC	1 cut(s)	267
MseI	TTAA	4 cut(s)	66, 195, 498, 585
MslI	CAYNNNNRTG	1 cut(s)	560
MspR9I	CCNGG	1 cut(s)	308
MunI	CAATTG	1 cut(s)	399
Mva1269I	GAATGC	1 cut(s)	757
MvaI	CCWGG	1 cut(s)	308
MwoI	GCNNNNNNNGC	5 cut(s)	129, 571, 686, 1430, 1439
NdeII	GATC	5 cut(s)	22, 648, 920, 1119, 1534
NlaIII	CATG	5 cut(s)	213, 534, 740, 832, 1108
NlaIV	GGNNCC	4 cut(s)	305, 436, 1079, 1447
NmuCI	GTSAC	6 cut(s)	95, 409, 593, 1042, 1147, 1171
NspI	RCATGY	1 cut(s)	740
PaeR7I	CTCGAG	1 cut(s)	956
PagI	TCATGA	1 cut(s)	1104
PciSI	GCTCTTC	1 cut(s)	834
PctI	GAATGC	1 cut(s)	757
PdmI	GAANNNNTTC	1 cut(s)	267
PfeI	GAWTC	5 cut(s)	38, 546, 655, 773, 1681
PkrI	GCNGC	5 cut(s)	682, 757, 853, 908, 1432
PleI	GAGTC	1 cut(s)	1154
PpsI	GAGTC	1 cut(s)	1154
Psp6I	CCWGG	1 cut(s)	306
PspFI	CCCAGC	2 cut(s)	404, 758
PspGI	CCWGG	1 cut(s)	306
PspN4I	GGNNCC	4 cut(s)	305, 436, 1079, 1447
PspPI	GGNCC	3 cut(s)	46, 1403, 1445
PstI	CTGCAG	1 cut(s)	856
PstNI	CAGNNNCTG	1 cut(s)	341
PsuI	RGATCY	1 cut(s)	1534
RsaI	GTAC	5 cut(s)	784, 813, 888, 954, 1301
RsaNI	GTAC	5 cut(s)	783, 812, 887, 953, 1300
RseI	CAYNNNNRTG	1 cut(s)	560
SapI	GCTCTTC	1 cut(s)	834
SaqAI	TTAA	4 cut(s)	66, 195, 498, 585
SatI	GCNGC	5 cut(s)	681, 756, 852, 907, 1431
Sau3AI	GATC	5 cut(s)	22, 648, 920, 1119, 1534
Sau96I	GGNCC	3 cut(s)	46, 1403, 1445
ScaI	AGTACT	1 cut(s)	888
SchI	GAGTC	1 cut(s)	1155
ScrFI	CCNGG	1 cut(s)	308
SduI	GDGCHC	3 cut(s)	439, 1527, 1588
SfaNI	GCATC	1 cut(s)	951
SfcI	CTRYAG	2 cut(s)	852, 867
Sfr274I	CTCGAG	1 cut(s)	956
SinI	GGWCC	2 cut(s)	1403, 1445
SlaI	CTCGAG	1 cut(s)	956
SmiMI	CAYNNNNRTG	1 cut(s)	560
SmlI	CTYRAG	4 cut(s)	219, 805, 956, 1700
SmoI	CTYRAG	4 cut(s)	219, 805, 956, 1700
SsiI	CCGC	2 cut(s)	474, 1528
SspMI	CTAG	4 cut(s)	140, 453, 890, 1049
StyD4I	CCNGG	1 cut(s)	306
StyI	CCWWGG	3 cut(s)	977, 1214, 1601
TaaI	ACNGT	4 cut(s)	782, 1094, 1339, 1555
TaiI	ACGT	1 cut(s)	1659
TaqI	TCGA	3 cut(s)	580, 776, 957
TatI	WGTACW	2 cut(s)	782, 886
TfiI	GAWTC	5 cut(s)	38, 546, 655, 773, 1681
Tru1I	TTAA	4 cut(s)	66, 195, 498, 585
Tru9I	TTAA	4 cut(s)	66, 195, 498, 585
TscAI	CASTG	6 cut(s)	130, 775, 805, 1047, 1062, 1560
TseFI	GTSAC	6 cut(s)	95, 409, 593, 1042, 1147, 1171
TseI	GCWGC	5 cut(s)	680, 755, 851, 906, 1430
Tsp45I	GTSAC	6 cut(s)	95, 409, 593, 1042, 1147, 1171
TspDTI	ATGAA	4 cut(s)	17, 189, 232, 1093
TspRI	CASTG	6 cut(s)	130, 775, 805, 1047, 1062, 1560
VpaK11BI	GGWCC	2 cut(s)	1403, 1445
XceI	RCATGY	1 cut(s)	740
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1384
XhoI	CTCGAG	1 cut(s)	956
XmiI	GTMKAC	2 cut(s)	1502, 1653
XmnI	GAANNNNTTC	1 cut(s)	267
XspI	CTAG	4 cut(s)	140, 453, 890, 1049
ZrmI	AGTACT	1 cut(s)	888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.