Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0010943

Physical Location & Seq

Genomic Coordinates Reverse (-)

2937415 .. 2943109

Gene Structure 5695 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G019800.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGGGAAAGTCTGAAGAAGACCAGGCTTTGCCTTCCAATGTTGCCTCTGAGGCCTCAGCTCAAAATGCAGAGGCTCACTGTGCTGGTTGCTGTGGTGGGTTTCGGAGATTCATTGGCCTCAGATGCATCTTGGTTCTCTTACTCTCTGTTGCTTTGTTCCTCTCTGCTATGTTCTGGTTACCTCCATTTCTTCAGTTTGCGGATCAGAGCGATCTGGATCTTGATTCAAAGTTCAAAGATCATTATATAGTAGCAAGTTTCAATCTTTGGAAGCCAGTTTCTTTGCTGGAGGATAATATTTTGCAGCTTGAAAATGACATTTTTGATGAGATTGTTGCTCCATCAATTAAGGTCGTAATCTTATCTGTGGAATCCTTAACTGGATCAAACACAACAACAGTTGTGTTTGGGGTTGATCCAGAGCCAAAATCATCGAAATTATTACCCACTTCTCAAAGTTTGATCAAGTCATCTTTTGAATATTTGGTGACACACCAATCACTCAGCCTGAATACATCCTTGTTTGGGCGCACATTCCTTTTTGAGGTACTAAAGTTTCCAGGTGGAATTACCATAGTTCCTCCACAAAATGCGTTTCTTCTGCAGAAAGTGCAGATCCTTTTCAATTTTACCTTAAACTTCTCCATCTATCAAATACAATTAAATTTCAACGAACTGAAAAGCCAGCTGAAGGCAGGATTACATCTAGCACCCTATGAGAACTTGTATATTAGCTTGTCAAACTCAAGAGGTTCAACAGTAGCAGCCCCCACAACTGTTCGGGCATCTGTGTTTCTGACTGTTGGAAATACTCCTTCAATGCAAAGGTTAAAACAACTGTCTCAAACCATCAGAGGCTCTCATTCAAGAAACCTGGGCCTGAATAATACTGTATTTGGTAGAGTTAAGCAAGTCCGTTTATCATCTATCTACTCCCTTAATGGTGGTGATGGCACTGTGCCGTCACCTTCTCCTGCTCCACTGCCCCATCCGCACCACCATCACCACCACCATCACCATCATCATCACCACCATCATCATCACCACCACAACCCCCATCTGGCTCCTGCAGTTTCACCCGCACCTGCACCCGACAGTGGTCCACCTGCAAGTCAAAAAGGTGGGCCTGCACCTAAGGATGGTTCACCTGACGCACAGAAAGGTTCTCCACCCAAGAAAAGTTGTGAAGCAAAGCCTCCCAGTTTCCAGTTTGGATCTAGAGGGAAGACTGGAAAGGAGTCTCATTTTGCTCCTGCGGTTGCACCAAATATGTTTCCTCCTGTCTTTATTCCCTCCCCACAAAAACAAGTACAGCCATCAGCACCCATCTACCCTTCAGTTCCAGTATCTAGTCCTTTGCCTCATGTGGTTTTTGCTCATGTCCAGCCGCCATCAAAGAGTGAATCAGATACAAGACATTCTGGCACAATGTCATCAGCTGAACCATCGCCATCCACATCTTCTGCAGCTCTTCTTCCTTCTGTTCAATGGGCATTTTCTCTGTTCCTAGTTCTTGTGTTACATGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

510

Amino Acids

55.22

Weight (kDa)

8.84

Isoelectric Point (pI)

54.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010943)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56590 AT3G56590
fragaria_vesca	FvH4_1g29240 FvH4_1g29240 FvH4_1g29240 FvH4_1g29240
prunus_persica	Prupe.7G019800_v2.0.a1 Prupe.7G019800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0494681
rosa_laevigata	RLG00000022664
rosa_multiflora	Rmu_sc0000840.1_g000020
rosa_roxburghii	Rroxscaffold_6G00390970
rosa_rugosa	Rorug03G0268000 Rorug03G0268000 Rorug03G0268000
rosa_samantha	Rh3AG316500 Rh3BG351800 Rh3CG348800 Rh3DG351400
rosa_wichuraiana	Rw3G027620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1093, 1114
Acc36I	ACCTGC	2 cut(s)	1093, 1114
AciI	CCGC	5 cut(s)	200, 992, 1080, 1256, 1388
AclWI	GGATC	6 cut(s)	210, 225, 391, 410, 610, 1222
AcsI	RAATTY	1 cut(s)	664
AcuI	CTGAAG	4 cut(s)	33, 176, 710, 1320
AfaI	GTAC	2 cut(s)	549, 1311
AfiI	CCNNNNNNNGG	6 cut(s)	525, 544, 691, 1060, 1097, 1139
AflIII	ACRYGT	1 cut(s)	1522
AjnI	CCWGG	3 cut(s)	21, 559, 873
AluBI	AGCT	6 cut(s)	59, 307, 688, 735, 1439, 1469
AluI	AGCT	6 cut(s)	59, 307, 688, 735, 1439, 1469
Alw26I	GTCTC	2 cut(s)	846, 1245
AlwI	GGATC	6 cut(s)	210, 225, 391, 410, 610, 1222
AoxI	GGCC	4 cut(s)	51, 115, 877, 1124
ApeKI	GCWGC	3 cut(s)	304, 764, 1466
ApoI	RAATTY	1 cut(s)	664
AspLEI	GCGC	1 cut(s)	531
AspS9I	GGNCC	3 cut(s)	877, 1100, 1124
AsuHPI	GGTGA	9 cut(s)	499, 957, 959, 995, 1007, 1019, 1034, 1068, 1137
AvaII	GGWCC	1 cut(s)	1100
AxyI	CCTNAGG	1 cut(s)	1134
BaeI	ACNNNNGTAYC	2 cut(s)	539, 572
BbsI	GAAGAC	2 cut(s)	24, 1232
BbvCI	CCTCAGC	1 cut(s)	55
BbvI	GCAGC	3 cut(s)	316, 776, 1478
BceAI	ACGGC	1 cut(s)	946
BciT130I	CCWGG	3 cut(s)	23, 561, 875
BclI	TGATCA	1 cut(s)	462
BcoDI	GTCTC	2 cut(s)	846, 1245
BfaI	CTAG	4 cut(s)	707, 1218, 1350, 1508
BfmI	CTRYAG	3 cut(s)	602, 1068, 1464
BfuAI	ACCTGC	2 cut(s)	1093, 1114
BglI	GCCNNNNNGGC	1 cut(s)	50
BisI	GCNGC	4 cut(s)	305, 765, 1388, 1467
BlsI	GCNGC	4 cut(s)	306, 766, 1389, 1468
Bme1390I	CCNGG	3 cut(s)	23, 561, 875
Bme18I	GGWCC	1 cut(s)	1100
BmgT120I	GGNCC	3 cut(s)	877, 1100, 1124
BmiI	GGNNCC	1 cut(s)	1065
BmrFI	CCNGG	3 cut(s)	23, 561, 875
BmrI	ACTGGG	1 cut(s)	1194
BmsI	GCATC	3 cut(s)	113, 135, 794
BmuI	ACTGGG	1 cut(s)	1194
BoxI	GACNNNNGTC	1 cut(s)	1098
BpiI	GAAGAC	2 cut(s)	24, 1232
BpmI	CTGGAG	1 cut(s)	308
Bpu10I	CCTNAGC	1 cut(s)	55
BpuEI	CTTGAG	1 cut(s)	730
BsaBI	GATNNNNATC	1 cut(s)	216
BsaJI	CCNNGG	1 cut(s)	874
Bsc4I	CCNNNNNNNGG	6 cut(s)	525, 544, 691, 1060, 1097, 1139
Bse1I	ACTGG	6 cut(s)	275, 385, 1200, 1207, 1234, 1343
Bse21I	CCTNAGG	1 cut(s)	1134
Bse8I	GATNNNNATC	1 cut(s)	216
BseBI	CCWGG	3 cut(s)	23, 561, 875
BseDI	CCNNGG	1 cut(s)	874
BseGI	GGATG	4 cut(s)	515, 988, 1144, 1451
BseJI	GATNNNNATC	1 cut(s)	216
BseLI	CCNNNNNNNGG	6 cut(s)	525, 544, 691, 1060, 1097, 1139
BseMII	CTCAG	4 cut(s)	39, 69, 133, 517
BseNI	ACTGG	6 cut(s)	275, 385, 1200, 1207, 1234, 1343
BseXI	GCAGC	3 cut(s)	316, 776, 1478
BsgI	GTGCAG	3 cut(s)	632, 1071, 1113
BshFI	GGCC	4 cut(s)	53, 117, 879, 1126
BslI	CCNNNNNNNGG	6 cut(s)	525, 544, 691, 1060, 1097, 1139
BsmAI	GTCTC	2 cut(s)	846, 1245
BsnI	GGCC	4 cut(s)	53, 117, 879, 1126
Bsp143I	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
BspACI	CCGC	5 cut(s)	200, 992, 1080, 1256, 1388
BspANI	GGCC	4 cut(s)	53, 117, 879, 1126
BspCNI	CTCAG	4 cut(s)	40, 68, 132, 516
BspLI	GGNNCC	1 cut(s)	1065
BspMAI	CTGCAG	3 cut(s)	606, 1072, 1468
BspMI	ACCTGC	2 cut(s)	1093, 1114
BspPI	GGATC	6 cut(s)	210, 225, 391, 410, 610, 1222
BspQI	GCTCTTC	1 cut(s)	1476
BsrI	ACTGG	6 cut(s)	275, 385, 1200, 1207, 1234, 1343
BssECI	CCNNGG	1 cut(s)	874
BssMI	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
Bst2UI	CCWGG	3 cut(s)	23, 561, 875
Bst4CI	ACNGT	9 cut(s)	80, 400, 760, 778, 802, 840, 892, 958, 1097
Bst6I	CTCTTC	1 cut(s)	1476
BstAPI	GCANNNNNTGC	1 cut(s)	610
BstC8I	GCNNGC	2 cut(s)	686, 1128
BstDEI	CTNAG	5 cut(s)	48, 55, 119, 503, 1134
BstEII	GGTNACC	1 cut(s)	177
BstENI	CCTNNNNNAGG	1 cut(s)	542
BstF5I	GGATG	4 cut(s)	515, 988, 1144, 1451
BstHHI	GCGC	1 cut(s)	531
BstKTI	GATC	9 cut(s)	205, 214, 220, 241, 386, 418, 465, 618, 1217
BstMAI	GTCTC	2 cut(s)	846, 1245
BstMBI	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
BstMWI	GCNNNNNNNGC	6 cut(s)	50, 65, 80, 123, 610, 991
BstNI	CCWGG	3 cut(s)	23, 561, 875
BstNSI	RCATGY	1 cut(s)	1526
BstPAI	GACNNNNGTC	1 cut(s)	1098
BstPI	GGTNACC	1 cut(s)	177
BstSCI	CCNGG	3 cut(s)	21, 559, 873
BstSFI	CTRYAG	3 cut(s)	602, 1068, 1464
BstV1I	GCAGC	3 cut(s)	316, 776, 1478
BstV2I	GAAGAC	2 cut(s)	24, 1232
BstX2I	RGATCY	3 cut(s)	217, 615, 1214
BstYI	RGATCY	3 cut(s)	217, 615, 1214
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuRI	GGCC	4 cut(s)	53, 117, 879, 1126
BtgZI	GCGATG	1 cut(s)	1431
BtsCI	GGATG	4 cut(s)	515, 988, 1144, 1451
BtsI	GCAGTG	1 cut(s)	980
BtsIMutI	CAGTG	4 cut(s)	76, 954, 980, 1102
BveI	ACCTGC	2 cut(s)	1093, 1114
Cac8I	GCNNGC	2 cut(s)	686, 1128
CfoI	GCGC	1 cut(s)	531
Cfr13I	GGNCC	3 cut(s)	877, 1100, 1124
CseI	GACGC	1 cut(s)	1160
Csp6I	GTAC	2 cut(s)	548, 1310
CviAII	CATG	3 cut(s)	1364, 1379, 1523
CviQI	GTAC	2 cut(s)	548, 1310
DdeI	CTNAG	5 cut(s)	48, 55, 119, 503, 1134
DpnI	GATC	9 cut(s)	204, 213, 219, 240, 385, 417, 464, 617, 1216
DpnII	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
Eam1104I	CTCTTC	1 cut(s)	1476
EarI	CTCTTC	1 cut(s)	1476
Eco147I	AGGCCT	1 cut(s)	53
Eco47I	GGWCC	1 cut(s)	1100
Eco57I	CTGAAG	4 cut(s)	33, 176, 710, 1320
Eco81I	CCTNAGG	1 cut(s)	1134
Eco91I	GGTNACC	1 cut(s)	177
EcoNI	CCTNNNNNAGG	1 cut(s)	542
EcoO65I	GGTNACC	1 cut(s)	177
EcoRII	CCWGG	3 cut(s)	21, 559, 873
EcoT22I	ATGCAT	1 cut(s)	128
FaeI	CATG	3 cut(s)	1367, 1382, 1526
FatI	CATG	3 cut(s)	1363, 1378, 1522
FauI	CCCGC	1 cut(s)	1087
FbaI	TGATCA	1 cut(s)	462
Fnu4HI	GCNGC	4 cut(s)	305, 765, 1388, 1467
FokI	GGATG	4 cut(s)	502, 975, 1151, 1438
Fsp4HI	GCNGC	4 cut(s)	305, 765, 1388, 1467
FspBI	CTAG	4 cut(s)	707, 1218, 1350, 1508
GlaI	GCGC	1 cut(s)	530
GluI	GCNGC	4 cut(s)	305, 765, 1388, 1467
GsuI	CTGGAG	1 cut(s)	308
HaeIII	GGCC	4 cut(s)	53, 117, 879, 1126
HgaI	GACGC	1 cut(s)	1160
HhaI	GCGC	1 cut(s)	531
Hin1II	CATG	3 cut(s)	1367, 1382, 1526
Hin6I	GCGC	1 cut(s)	529
HinP1I	GCGC	1 cut(s)	529
HinfI	GANTC	5 cut(s)	108, 224, 371, 1238, 1403
HphI	GGTGA	9 cut(s)	499, 957, 959, 995, 1007, 1019, 1034, 1068, 1137
Hpy166II	GTNNAC	2 cut(s)	1103, 1145
Hpy188I	TCNGA	8 cut(s)	13, 49, 105, 122, 207, 798, 854, 1408
Hpy188III	TCNNGA	6 cut(s)	215, 221, 419, 747, 867, 1218
Hpy8I	GTNNAC	2 cut(s)	1103, 1145
HpyAV	CCTTC	6 cut(s)	42, 685, 825, 978, 1344, 1488
HpyCH4III	ACNGT	9 cut(s)	80, 400, 760, 778, 802, 840, 892, 958, 1097
HpyF10VI	GCNNNNNNNGC	6 cut(s)	50, 65, 80, 123, 610, 991
HpyF3I	CTNAG	5 cut(s)	48, 55, 119, 503, 1134
Hsp92II	CATG	3 cut(s)	1367, 1382, 1526
HspAI	GCGC	1 cut(s)	529
Ksp22I	TGATCA	1 cut(s)	462
Kzo9I	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
LguI	GCTCTTC	1 cut(s)	1476
LmnI	GCTCC	4 cut(s)	343, 982, 1069, 1255
Lsp1109I	GCAGC	3 cut(s)	316, 776, 1478
LweI	GCATC	3 cut(s)	113, 135, 794
MaeI	CTAG	4 cut(s)	707, 1218, 1350, 1508
MaeIII	GTNAC	4 cut(s)	177, 487, 963, 1518
MalI	GATC	9 cut(s)	204, 213, 219, 240, 385, 417, 464, 617, 1216
MboI	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
MboII	GAAGA	8 cut(s)	26, 29, 182, 590, 1237, 1452, 1463, 1466
MflI	RGATCY	3 cut(s)	217, 615, 1214
MluCI	AATT	6 cut(s)	345, 437, 567, 625, 659, 664
MlyI	GAGTC	1 cut(s)	1247
MmeI	TCCRAC	1 cut(s)	784
Mph1103I	ATGCAT	1 cut(s)	128
MseI	TTAA	7 cut(s)	348, 377, 635, 662, 830, 906, 939
MspA1I	CMGCKG	2 cut(s)	688, 1439
MspR9I	CCNGG	3 cut(s)	23, 561, 875
MvaI	CCWGG	3 cut(s)	23, 561, 875
MwoI	GCNNNNNNNGC	6 cut(s)	50, 65, 80, 123, 610, 991
NdeII	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
NlaIII	CATG	3 cut(s)	1367, 1382, 1526
NlaIV	GGNNCC	1 cut(s)	1065
NmuCI	GTSAC	2 cut(s)	487, 963
NsiI	ATGCAT	1 cut(s)	128
NspI	RCATGY	1 cut(s)	1526
PaqCI	CACCTGC	2 cut(s)	1093, 1114
PceI	AGGCCT	1 cut(s)	53
PciI	ACATGT	1 cut(s)	1522
PciSI	GCTCTTC	1 cut(s)	1476
PfeI	GAWTC	4 cut(s)	108, 224, 371, 1403
PkrI	GCNGC	4 cut(s)	306, 766, 1389, 1468
PleI	GAGTC	1 cut(s)	1246
PpsI	GAGTC	1 cut(s)	1246
PscI	ACATGT	1 cut(s)	1522
PshAI	GACNNNNGTC	1 cut(s)	1098
Psp6I	CCWGG	3 cut(s)	21, 559, 873
PspEI	GGTNACC	1 cut(s)	177
PspGI	CCWGG	3 cut(s)	21, 559, 873
PspN4I	GGNNCC	1 cut(s)	1065
PspPI	GGNCC	3 cut(s)	877, 1100, 1124
PstI	CTGCAG	3 cut(s)	606, 1072, 1468
PsuI	RGATCY	3 cut(s)	217, 615, 1214
PvuII	CAGCTG	2 cut(s)	688, 1439
RsaI	GTAC	2 cut(s)	549, 1311
RsaNI	GTAC	2 cut(s)	548, 1310
SapI	GCTCTTC	1 cut(s)	1476
SaqAI	TTAA	7 cut(s)	348, 377, 635, 662, 830, 906, 939
SatI	GCNGC	4 cut(s)	305, 765, 1388, 1467
Sau3AI	GATC	9 cut(s)	202, 211, 217, 238, 383, 415, 462, 615, 1214
Sau96I	GGNCC	3 cut(s)	877, 1100, 1124
SchI	GAGTC	1 cut(s)	1247
ScrFI	CCNGG	3 cut(s)	23, 561, 875
SfaNI	GCATC	3 cut(s)	113, 135, 794
SfcI	CTRYAG	3 cut(s)	602, 1068, 1464
SinI	GGWCC	1 cut(s)	1100
SmlI	CTYRAG	1 cut(s)	745
SmoI	CTYRAG	1 cut(s)	745
Sse9I	AATT	6 cut(s)	345, 437, 567, 625, 659, 664
SseBI	AGGCCT	1 cut(s)	53
SsiI	CCGC	5 cut(s)	200, 992, 1080, 1256, 1388
SspI	AATATT	2 cut(s)	298, 482
SspMI	CTAG	4 cut(s)	707, 1218, 1350, 1508
StuI	AGGCCT	1 cut(s)	53
StyD4I	CCNGG	3 cut(s)	21, 559, 873
TaaI	ACNGT	9 cut(s)	80, 400, 760, 778, 802, 840, 892, 958, 1097
TaqI	TCGA	1 cut(s)	434
TasI	AATT	6 cut(s)	345, 437, 567, 625, 659, 664
TatI	WGTACW	1 cut(s)	1309
TauI	GCSGC	1 cut(s)	1390
TfiI	GAWTC	4 cut(s)	108, 224, 371, 1403
Tru1I	TTAA	7 cut(s)	348, 377, 635, 662, 830, 906, 939
Tru9I	TTAA	7 cut(s)	348, 377, 635, 662, 830, 906, 939
TscAI	CASTG	4 cut(s)	83, 961, 987, 1102
TseFI	GTSAC	2 cut(s)	487, 963
TseI	GCWGC	3 cut(s)	304, 764, 1466
Tsp45I	GTSAC	2 cut(s)	487, 963
TspDTI	ATGAA	1 cut(s)	100
TspGWI	ACGGA	1 cut(s)	905
TspRI	CASTG	4 cut(s)	83, 961, 987, 1102
VpaK11BI	GGWCC	1 cut(s)	1100
XagI	CCTNNNNNAGG	1 cut(s)	542
XapI	RAATTY	1 cut(s)	664
XbaI	TCTAGA	1 cut(s)	1217
XceI	RCATGY	1 cut(s)	1526
XspI	CTAG	4 cut(s)	707, 1218, 1350, 1508
Zsp2I	ATGCAT	1 cut(s)	128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.