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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G56810 |
| fragaria_vesca | FvH4_1g29470 |
| malus_domestica | MD12G1111200.v1.1 |
| prunus_persica | Prupe.7G023900_v2.0.a1 Prupe.7G023900_v2.0.a1 Prupe.7G023900_v2.0.a1 Prupe.7G023900_v2.0.a1 |
| pyrus_communis | pycom12g09350 |
| rosa_chinensis | RchiOBHm_Chr3g0495051 |
| rosa_laevigata | RLG00000022648 |
| rosa_multiflora | Rmu_sc0000340.1_g000035 Rmu_sc0004664.1_g000002 |
| rosa_roxburghii | Rroxscaffold_6G00390810 |
| rosa_rugosa | Rorug03G0269600 |
| rosa_samantha | Rh3AG318600 Rh3BG353900 Rh3CG351400 Rh3DG353000 |
| rosa_wichuraiana | Rw3G027790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 439 |
| AccI | GTMKAC | 1 cut(s) | 686 |
| AccII | CGCG | 1 cut(s) | 42 |
| AciI | CCGC | 7 cut(s) | 42, 130, 227, 347, 416, 437, 567 |
| AclWI | GGATC | 1 cut(s) | 316 |
| AcsI | RAATTY | 2 cut(s) | 134, 625 |
| AcyI | GRCGYC | 1 cut(s) | 534 |
| AdeI | CACNNNGTG | 1 cut(s) | 44 |
| AfaI | GTAC | 2 cut(s) | 294, 649 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 236, 465 |
| AgsI | TTSAA | 2 cut(s) | 511, 630 |
| AjiI | CACGTC | 1 cut(s) | 453 |
| AjnI | CCWGG | 1 cut(s) | 775 |
| AluBI | AGCT | 4 cut(s) | 218, 357, 413, 475 |
| AluI | AGCT | 4 cut(s) | 218, 357, 413, 475 |
| Alw21I | GWGCWC | 2 cut(s) | 359, 751 |
| Alw26I | GTCTC | 2 cut(s) | 249, 581 |
| AlwI | GGATC | 1 cut(s) | 316 |
| AoxI | GGCC | 1 cut(s) | 513 |
| ApeKI | GCWGC | 3 cut(s) | 84, 469, 472 |
| ApoI | RAATTY | 2 cut(s) | 134, 625 |
| AseI | ATTAAT | 1 cut(s) | 860 |
| AspLEI | GCGC | 3 cut(s) | 27, 330, 485 |
| AspS9I | GGNCC | 3 cut(s) | 343, 514, 964 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 555, 608, 846 |
| AvaII | GGWCC | 2 cut(s) | 343, 964 |
| BanI | GGYRCC | 1 cut(s) | 439 |
| BanII | GRGCYC | 3 cut(s) | 359, 450, 558 |
| BbsI | GAAGAC | 2 cut(s) | 510, 1060 |
| Bbv12I | GWGCWC | 2 cut(s) | 359, 751 |
| BbvI | GCAGC | 3 cut(s) | 71, 481, 484 |
| BccI | CCATC | 2 cut(s) | 385, 988 |
| BceAI | ACGGC | 1 cut(s) | 521 |
| BciT130I | CCWGG | 1 cut(s) | 777 |
| BcoDI | GTCTC | 2 cut(s) | 249, 581 |
| BfaI | CTAG | 2 cut(s) | 186, 410 |
| BfoI | RGCGCY | 1 cut(s) | 331 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 542 |
| BisI | GCNGC | 3 cut(s) | 85, 470, 473 |
| BlpI | GCTNAGC | 1 cut(s) | 28 |
| BlsI | GCNGC | 3 cut(s) | 86, 471, 474 |
| Bme1390I | CCNGG | 1 cut(s) | 777 |
| Bme18I | GGWCC | 2 cut(s) | 343, 964 |
| BmgBI | CACGTC | 1 cut(s) | 453 |
| BmgT120I | GGNCC | 3 cut(s) | 343, 514, 964 |
| BmiI | GGNNCC | 4 cut(s) | 178, 345, 441, 557 |
| BmrFI | CCNGG | 1 cut(s) | 777 |
| BmsI | GCATC | 3 cut(s) | 105, 664, 854 |
| BpiI | GAAGAC | 2 cut(s) | 510, 1060 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 28 |
| BsaHI | GRCGYC | 1 cut(s) | 534 |
| BsaI | GGTCTC | 1 cut(s) | 581 |
| BsaJI | CCNNGG | 1 cut(s) | 67 |
| BsaWI | WCCGGW | 1 cut(s) | 664 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 236, 465 |
| Bse118I | RCCGGY | 1 cut(s) | 80 |
| Bse3DI | GCAATG | 2 cut(s) | 880, 912 |
| BseBI | CCWGG | 1 cut(s) | 777 |
| BseDI | CCNNGG | 1 cut(s) | 67 |
| BseGI | GGATG | 1 cut(s) | 655 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 236, 465 |
| BseMI | GCAATG | 2 cut(s) | 880, 912 |
| BseMII | CTCAG | 3 cut(s) | 42, 342, 642 |
| BseRI | GAGGAG | 3 cut(s) | 25, 797, 943 |
| BseXI | GCAGC | 3 cut(s) | 71, 481, 484 |
| BsgI | GTGCAG | 1 cut(s) | 925 |
| Bsh1236I | CGCG | 1 cut(s) | 42 |
| BshFI | GGCC | 1 cut(s) | 515 |
| BshNI | GGYRCC | 1 cut(s) | 439 |
| BsiHKAI | GWGCWC | 2 cut(s) | 359, 751 |
| BsiSI | CCGG | 5 cut(s) | 81, 93, 314, 325, 665 |
| BslFI | GGGAC | 2 cut(s) | 288, 923 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 236, 465 |
| BsmAI | GTCTC | 2 cut(s) | 249, 581 |
| BsmFI | GGGAC | 2 cut(s) | 288, 923 |
| BsnI | GGCC | 1 cut(s) | 515 |
| Bso31I | GGTCTC | 1 cut(s) | 581 |
| Bsp1286I | GDGCHC | 4 cut(s) | 359, 450, 558, 751 |
| Bsp143I | GATC | 3 cut(s) | 321, 525, 560 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 28 |
| BspACI | CCGC | 7 cut(s) | 42, 130, 227, 347, 416, 437, 567 |
| BspANI | GGCC | 1 cut(s) | 515 |
| BspCNI | CTCAG | 3 cut(s) | 41, 343, 643 |
| BspFNI | CGCG | 1 cut(s) | 42 |
| BspLI | GGNNCC | 4 cut(s) | 178, 345, 441, 557 |
| BspPI | GGATC | 1 cut(s) | 316 |
| BspT107I | GGYRCC | 1 cut(s) | 439 |
| BspTNI | GGTCTC | 1 cut(s) | 581 |
| BsrDI | GCAATG | 2 cut(s) | 880, 912 |
| BsrFI | RCCGGY | 1 cut(s) | 80 |
| BssAI | RCCGGY | 1 cut(s) | 80 |
| BssECI | CCNNGG | 1 cut(s) | 67 |
| BssMI | GATC | 3 cut(s) | 321, 525, 560 |
| BssNI | GRCGYC | 1 cut(s) | 534 |
| Bst2UI | CCWGG | 1 cut(s) | 777 |
| Bst6I | CTCTTC | 2 cut(s) | 130, 187 |
| BstACI | GRCGYC | 1 cut(s) | 534 |
| BstC8I | GCNNGC | 1 cut(s) | 747 |
| BstDEI | CTNAG | 4 cut(s) | 28, 351, 376, 651 |
| BstDSI | CCRYGG | 1 cut(s) | 67 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 234 |
| BstF5I | GGATG | 1 cut(s) | 655 |
| BstFNI | CGCG | 1 cut(s) | 42 |
| BstH2I | RGCGCY | 1 cut(s) | 331 |
| BstHHI | GCGC | 3 cut(s) | 27, 330, 485 |
| BstKTI | GATC | 3 cut(s) | 324, 528, 563 |
| BstMAI | GTCTC | 2 cut(s) | 249, 581 |
| BstMBI | GATC | 3 cut(s) | 321, 525, 560 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 93, 215, 424, 542 |
| BstNI | CCWGG | 1 cut(s) | 777 |
| BstNSI | RCATGY | 2 cut(s) | 91, 1047 |
| BstSCI | CCNGG | 1 cut(s) | 775 |
| BstUI | CGCG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 3 cut(s) | 71, 481, 484 |
| BstV2I | GAAGAC | 2 cut(s) | 510, 1060 |
| BstX2I | RGATCY | 1 cut(s) | 321 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 340, 864 |
| BstYI | RGATCY | 1 cut(s) | 321 |
| BsuRI | GGCC | 1 cut(s) | 515 |
| BtgI | CCRYGG | 1 cut(s) | 67 |
| BtgZI | GCGATG | 1 cut(s) | 82 |
| BtrI | CACGTC | 1 cut(s) | 453 |
| BtsCI | GGATG | 1 cut(s) | 655 |
| BtsI | GCAGTG | 1 cut(s) | 1028 |
| BtsIMutI | CAGTG | 2 cut(s) | 843, 1028 |
| Cac8I | GCNNGC | 1 cut(s) | 747 |
| CfoI | GCGC | 3 cut(s) | 27, 330, 485 |
| Cfr10I | RCCGGY | 1 cut(s) | 80 |
| Cfr13I | GGNCC | 3 cut(s) | 343, 514, 964 |
| CseI | GACGC | 1 cut(s) | 542 |
| Csp6I | GTAC | 2 cut(s) | 293, 648 |
| CviAII | CATG | 3 cut(s) | 88, 880, 1044 |
| CviQI | GTAC | 2 cut(s) | 293, 648 |
| DdeI | CTNAG | 4 cut(s) | 28, 351, 376, 651 |
| DpnI | GATC | 3 cut(s) | 323, 527, 562 |
| DpnII | GATC | 3 cut(s) | 321, 525, 560 |
| DraIII | CACNNNGTG | 1 cut(s) | 44 |
| Eam1104I | CTCTTC | 2 cut(s) | 130, 187 |
| EarI | CTCTTC | 2 cut(s) | 130, 187 |
| Ecl136II | GAGCTC | 1 cut(s) | 357 |
| Eco24I | GRGCYC | 3 cut(s) | 359, 450, 558 |
| Eco31I | GGTCTC | 1 cut(s) | 581 |
| Eco47I | GGWCC | 2 cut(s) | 343, 964 |
| Eco53kI | GAGCTC | 1 cut(s) | 357 |
| EcoICRI | GAGCTC | 1 cut(s) | 357 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 234 |
| EcoO109I | RGGNCCY | 1 cut(s) | 514 |
| EcoRII | CCWGG | 1 cut(s) | 775 |
| EcoT38I | GRGCYC | 3 cut(s) | 359, 450, 558 |
| FaeI | CATG | 3 cut(s) | 91, 883, 1047 |
| FaqI | GGGAC | 2 cut(s) | 288, 923 |
| FatI | CATG | 3 cut(s) | 87, 879, 1043 |
| FauI | CCCGC | 3 cut(s) | 137, 354, 574 |
| FblI | GTMKAC | 1 cut(s) | 686 |
| Fnu4HI | GCNGC | 3 cut(s) | 85, 470, 473 |
| FokI | GGATG | 1 cut(s) | 642 |
| FriOI | GRGCYC | 3 cut(s) | 359, 450, 558 |
| Fsp4HI | GCNGC | 3 cut(s) | 85, 470, 473 |
| FspBI | CTAG | 2 cut(s) | 186, 410 |
| GlaI | GCGC | 3 cut(s) | 26, 329, 484 |
| GluI | GCNGC | 3 cut(s) | 85, 470, 473 |
| HaeII | RGCGCY | 1 cut(s) | 331 |
| HaeIII | GGCC | 1 cut(s) | 515 |
| HapII | CCGG | 5 cut(s) | 81, 93, 314, 325, 665 |
| HgaI | GACGC | 1 cut(s) | 542 |
| HhaI | GCGC | 3 cut(s) | 27, 330, 485 |
| Hin1I | GRCGYC | 1 cut(s) | 534 |
| Hin1II | CATG | 3 cut(s) | 91, 883, 1047 |
| Hin6I | GCGC | 3 cut(s) | 25, 328, 483 |
| HinP1I | GCGC | 3 cut(s) | 25, 328, 483 |
| HindIII | AAGCTT | 1 cut(s) | 216 |
| HinfI | GANTC | 4 cut(s) | 279, 661, 683, 833 |
| HpaII | CCGG | 5 cut(s) | 81, 93, 314, 325, 665 |
| HphI | GGTGA | 4 cut(s) | 56, 555, 608, 846 |
| Hpy166II | GTNNAC | 3 cut(s) | 343, 456, 687 |
| Hpy188I | TCNGA | 2 cut(s) | 560, 660 |
| Hpy188III | TCNNGA | 2 cut(s) | 186, 677 |
| Hpy8I | GTNNAC | 3 cut(s) | 343, 456, 687 |
| HpyAV | CCTTC | 3 cut(s) | 116, 505, 545 |
| HpyCH4IV | ACGT | 3 cut(s) | 291, 452, 1060 |
| HpyCH4V | TGCA | 5 cut(s) | 53, 87, 288, 623, 906 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 93, 215, 424, 542 |
| HpyF3I | CTNAG | 4 cut(s) | 28, 351, 376, 651 |
| HpySE526I | ACGT | 3 cut(s) | 291, 452, 1060 |
| Hsp92I | GRCGYC | 1 cut(s) | 534 |
| Hsp92II | CATG | 3 cut(s) | 91, 883, 1047 |
| HspAI | GCGC | 3 cut(s) | 25, 328, 483 |
| Kzo9I | GATC | 3 cut(s) | 321, 525, 560 |
| LmnI | GCTCC | 4 cut(s) | 335, 362, 418, 561 |
| Lsp1109I | GCAGC | 3 cut(s) | 71, 481, 484 |
| LweI | GCATC | 3 cut(s) | 105, 664, 854 |
| MaeI | CTAG | 2 cut(s) | 186, 410 |
| MaeII | ACGT | 3 cut(s) | 291, 452, 1060 |
| MaeIII | GTNAC | 3 cut(s) | 421, 596, 997 |
| MalI | GATC | 3 cut(s) | 323, 527, 562 |
| MboI | GATC | 3 cut(s) | 321, 525, 560 |
| MboII | GAAGA | 9 cut(s) | 117, 174, 175, 515, 535, 616, 781, 954, 1065 |
| MflI | RGATCY | 1 cut(s) | 321 |
| MhlI | GDGCHC | 4 cut(s) | 359, 450, 558, 751 |
| MluCI | AATT | 4 cut(s) | 134, 625, 736, 936 |
| MlyI | GAGTC | 2 cut(s) | 670, 692 |
| MmeI | TCCRAC | 2 cut(s) | 357, 378 |
| MseI | TTAA | 2 cut(s) | 734, 860 |
| MslI | CAYNNNNRTG | 1 cut(s) | 862 |
| MspA1I | CMGCKG | 1 cut(s) | 437 |
| MspI | CCGG | 5 cut(s) | 81, 93, 314, 325, 665 |
| MspR9I | CCNGG | 1 cut(s) | 777 |
| MvaI | CCWGG | 1 cut(s) | 777 |
| MvnI | CGCG | 1 cut(s) | 42 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 93, 215, 424, 542 |
| NdeII | GATC | 3 cut(s) | 321, 525, 560 |
| NlaIII | CATG | 3 cut(s) | 91, 883, 1047 |
| NlaIV | GGNNCC | 4 cut(s) | 178, 345, 441, 557 |
| NmuCI | GTSAC | 2 cut(s) | 421, 596 |
| NspI | RCATGY | 2 cut(s) | 91, 1047 |
| PfeI | GAWTC | 2 cut(s) | 279, 833 |
| PkrI | GCNGC | 3 cut(s) | 86, 471, 474 |
| PleI | GAGTC | 2 cut(s) | 669, 691 |
| PpsI | GAGTC | 2 cut(s) | 669, 691 |
| PshBI | ATTAAT | 1 cut(s) | 860 |
| Psp124BI | GAGCTC | 1 cut(s) | 359 |
| Psp6I | CCWGG | 1 cut(s) | 775 |
| PspGI | CCWGG | 1 cut(s) | 775 |
| PspN4I | GGNNCC | 4 cut(s) | 178, 345, 441, 557 |
| PspPI | GGNCC | 3 cut(s) | 343, 514, 964 |
| PsuI | RGATCY | 1 cut(s) | 321 |
| RsaI | GTAC | 2 cut(s) | 294, 649 |
| RsaNI | GTAC | 2 cut(s) | 293, 648 |
| RseI | CAYNNNNRTG | 1 cut(s) | 862 |
| SacI | GAGCTC | 1 cut(s) | 359 |
| SaqAI | TTAA | 2 cut(s) | 734, 860 |
| SatI | GCNGC | 3 cut(s) | 85, 470, 473 |
| Sau3AI | GATC | 3 cut(s) | 321, 525, 560 |
| Sau96I | GGNCC | 3 cut(s) | 343, 514, 964 |
| SchI | GAGTC | 2 cut(s) | 670, 692 |
| ScrFI | CCNGG | 1 cut(s) | 777 |
| SduI | GDGCHC | 4 cut(s) | 359, 450, 558, 751 |
| SfaNI | GCATC | 3 cut(s) | 105, 664, 854 |
| SinI | GGWCC | 2 cut(s) | 343, 964 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 862 |
| Sse9I | AATT | 4 cut(s) | 134, 625, 736, 936 |
| SsiI | CCGC | 7 cut(s) | 42, 130, 227, 347, 416, 437, 567 |
| SspMI | CTAG | 2 cut(s) | 186, 410 |
| SstI | GAGCTC | 1 cut(s) | 359 |
| StyD4I | CCNGG | 1 cut(s) | 775 |
| TaiI | ACGT | 3 cut(s) | 294, 455, 1063 |
| TaqI | TCGA | 1 cut(s) | 203 |
| TasI | AATT | 4 cut(s) | 134, 625, 736, 936 |
| TfiI | GAWTC | 2 cut(s) | 279, 833 |
| Tru1I | TTAA | 2 cut(s) | 734, 860 |
| Tru9I | TTAA | 2 cut(s) | 734, 860 |
| TscAI | CASTG | 2 cut(s) | 843, 1035 |
| TseFI | GTSAC | 2 cut(s) | 421, 596 |
| TseI | GCWGC | 3 cut(s) | 84, 469, 472 |
| Tsp45I | GTSAC | 2 cut(s) | 421, 596 |
| TspDTI | ATGAA | 4 cut(s) | 17, 516, 590, 781 |
| TspGWI | ACGGA | 1 cut(s) | 84 |
| TspRI | CASTG | 2 cut(s) | 843, 1035 |
| VpaK11BI | GGWCC | 2 cut(s) | 343, 964 |
| VspI | ATTAAT | 1 cut(s) | 860 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 234 |
| XapI | RAATTY | 2 cut(s) | 134, 625 |
| XbaI | TCTAGA | 1 cut(s) | 185 |
| XceI | RCATGY | 2 cut(s) | 91, 1047 |
| XmiI | GTMKAC | 1 cut(s) | 686 |
| XspI | CTAG | 2 cut(s) | 186, 410 |