Prupe.7G025100_v2.0.a1

Chaperone protein DNAj

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0013273
Physical Location & Seq
Forward (+)
4075794 .. 4080172
4379 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G025100.1

Sequence Viewer

Length: 540 bp
ATGGACCACTACAAGGTTCTGGGGTTGCCAAGGAGCGCGAGCAAAGAAGAAATCAAGGAAGCGTTCAGGAAACTGGCGGTGAAGCTGCACCCAGACAAGCACTCCCACTCCCCCAAGGCCGTGAGGGAGAGCACCACCCTCAGATTCAAGCAGGTCTCCGAGGCCTACCAGGTCCTCATCGACGATCGCAAGCGCGCCGACTATAATTTCCGGAGCTCTCGCTCCCACAATTACAATGCAAATACTAGTAATTACGGCCATGGTTATGGTTATGGTTATAGTGCTACCAATTATGGAGGCAAGTACAGAAGAGCCTCCTCTGGAGGCTCTGGAGCTTCCTCTGCGTTTGAGAATGTGCTTCGCTACGTCACGACGCGAGCGTTTCTTCTGAATCTCTCCGTTGCAGGGGCTTTCTTAGGAGGCGTGGTCGTTGTTAATAGGGGCTGGGATGCTCTATGGAAGATGCATAATTCCGAGAAATCATTTGAAGAAACAATGAGATCCCTTGAAAGATCCAAAGTACGTAAAGAGAAGCCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

180

Amino Acids

20.27

Weight (kDa)

9.99

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013273)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41000 AT2G41000
fragaria_vesca FvH4_1g29450 FvH4_1g29450
malus_domestica MD14G1013400.v1.1
prunus_persica Prupe.7G025100_v2.0.a1
pyrus_communis pycom14g01140
rosa_chinensis RchiOBHm_Chr3g0495321
rosa_laevigata RLG00000022629
rosa_multiflora Rmu_ssc0000243.1_g000005
rosa_roxburghii Rroxscaffold_6G00390620
rosa_rugosa Rorug03G0272600 Rorug03G0272700
rosa_samantha Rh3AG320600 Rh3BG355600 Rh3CG352600 Rh3DG354800
rosa_wichuraiana Rw3G027980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 142
AccII CGCG 3 cut(s) 38, 195, 376
AccIII TCCGGA 1 cut(s) 210
AciI CCGC 1 cut(s) 77
AclWI GGATC 2 cut(s) 495, 507
AcoI YGGCCR 1 cut(s) 256
AfaI GTAC 2 cut(s) 305, 522
AfiI CCNNNNNNNGG 2 cut(s) 13, 405
AgsI TTSAA 3 cut(s) 148, 488, 509
AhlI ACTAGT 1 cut(s) 245
AjnI CCWGG 1 cut(s) 168
AluBI AGCT 3 cut(s) 85, 216, 335
AluI AGCT 3 cut(s) 85, 216, 335
Alw21I GWGCWC 2 cut(s) 134, 218
Alw26I GTCTC 1 cut(s) 160
AlwI GGATC 2 cut(s) 495, 507
Aor13HI TCCGGA 1 cut(s) 210
AoxI GGCC 3 cut(s) 117, 162, 256
ApeKI GCWGC 1 cut(s) 85
AspLEI GCGC 3 cut(s) 38, 195, 197
AspS9I GGNCC 2 cut(s) 4, 172
AsuHPI GGTGA 1 cut(s) 91
AvaII GGWCC 2 cut(s) 4, 172
BanII GRGCYC 1 cut(s) 218
Bbv12I GWGCWC 2 cut(s) 134, 218
BbvI GCAGC 1 cut(s) 72
BceAI ACGGC 3 cut(s) 104, 271, 520
BciT130I CCWGG 1 cut(s) 170
BcoDI GTCTC 1 cut(s) 160
BcuI ACTAGT 1 cut(s) 245
BfaI CTAG 1 cut(s) 246
BfuAI ACCTGC 1 cut(s) 142
BisI GCNGC 1 cut(s) 86
BlsI GCNGC 1 cut(s) 87
Bme1390I CCNGG 1 cut(s) 170
Bme18I GGWCC 2 cut(s) 4, 172
BmgT120I GGNCC 2 cut(s) 4, 172
BmrFI CCNGG 1 cut(s) 170
BmsI GCATC 2 cut(s) 439, 453
BpmI CTGGAG 2 cut(s) 342, 351
BsaAI YACGTR 1 cut(s) 524
BsaI GGTCTC 1 cut(s) 160
BsaJI CCNNGG 4 cut(s) 29, 114, 159, 259
BsaWI WCCGGW 1 cut(s) 210
BsaXI ACNNNNNCTCC 6 cut(s) 86, 92, 116, 122, 411, 441
Bsc4I CCNNNNNNNGG 2 cut(s) 13, 405
Bse1I ACTGG 1 cut(s) 78
BseAI TCCGGA 1 cut(s) 210
BseBI CCWGG 1 cut(s) 170
BseDI CCNNGG 4 cut(s) 29, 114, 159, 259
BseGI GGATG 1 cut(s) 454
BseLI CCNNNNNNNGG 2 cut(s) 13, 405
BseMII CTCAG 1 cut(s) 154
BseNI ACTGG 1 cut(s) 78
BsePI GCGCGC 1 cut(s) 193
BseRI GAGGAG 1 cut(s) 307
BseXI GCAGC 1 cut(s) 72
BseYI CCCAGC 1 cut(s) 444
BsgI GTGCAG 1 cut(s) 71
Bsh1236I CGCG 3 cut(s) 38, 195, 376
Bsh1285I CGRYCG 1 cut(s) 187
BshFI GGCC 3 cut(s) 119, 164, 258
BsiEI CGRYCG 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 134, 218
BsiSI CCGG 1 cut(s) 211
BslI CCNNNNNNNGG 2 cut(s) 13, 405
BsmAI GTCTC 1 cut(s) 160
BsnI GGCC 3 cut(s) 119, 164, 258
Bso31I GGTCTC 1 cut(s) 160
Bsp1286I GDGCHC 2 cut(s) 134, 218
Bsp13I TCCGGA 1 cut(s) 210
Bsp143I GATC 3 cut(s) 184, 500, 512
Bsp19I CCATGG 1 cut(s) 259
BspACI CCGC 1 cut(s) 77
BspANI GGCC 3 cut(s) 119, 164, 258
BspCNI CTCAG 1 cut(s) 153
BspEI TCCGGA 1 cut(s) 210
BspFNI CGCG 3 cut(s) 38, 195, 376
BspMI ACCTGC 1 cut(s) 142
BspPI GGATC 2 cut(s) 495, 507
BspQI GCTCTTC 1 cut(s) 304
BspTNI GGTCTC 1 cut(s) 160
BsrI ACTGG 1 cut(s) 78
BssECI CCNNGG 4 cut(s) 29, 114, 159, 259
BssHII GCGCGC 1 cut(s) 193
BssMI GATC 3 cut(s) 184, 500, 512
BssT1I CCWWGG 3 cut(s) 29, 114, 259
Bst2UI CCWGG 1 cut(s) 170
Bst6I CTCTTC 1 cut(s) 304
BstBAI YACGTR 1 cut(s) 524
BstC8I GCNNGC 4 cut(s) 40, 191, 195, 378
BstDEI CTNAG 2 cut(s) 140, 415
BstDSI CCRYGG 1 cut(s) 259
BstF5I GGATG 1 cut(s) 454
BstFNI CGCG 3 cut(s) 38, 195, 376
BstHHI GCGC 3 cut(s) 38, 195, 197
BstKTI GATC 3 cut(s) 187, 503, 515
BstMAI GTCTC 1 cut(s) 160
BstMBI GATC 3 cut(s) 184, 500, 512
BstMCI CGRYCG 1 cut(s) 187
BstMWI GCNNNNNNNGC 1 cut(s) 341
BstNI CCWGG 1 cut(s) 170
BstSCI CCNGG 1 cut(s) 168
BstSNI TACGTA 1 cut(s) 524
BstUI CGCG 3 cut(s) 38, 195, 376
BstV1I GCAGC 1 cut(s) 72
BstX2I RGATCY 2 cut(s) 500, 512
BstXI CCANNNNNNTGG 1 cut(s) 266
BstYI RGATCY 2 cut(s) 500, 512
BsuRI GGCC 3 cut(s) 119, 164, 258
BtgI CCRYGG 1 cut(s) 259
BtsCI GGATG 1 cut(s) 454
BveI ACCTGC 1 cut(s) 142
Cac8I GCNNGC 4 cut(s) 40, 191, 195, 378
CfoI GCGC 3 cut(s) 38, 195, 197
Cfr13I GGNCC 2 cut(s) 4, 172
CseI GACGC 1 cut(s) 382
CsiI ACCWGGT 1 cut(s) 168
Csp6I GTAC 2 cut(s) 304, 521
CviAII CATG 1 cut(s) 260
CviQI GTAC 2 cut(s) 304, 521
DdeI CTNAG 2 cut(s) 140, 415
DpnI GATC 3 cut(s) 186, 502, 514
DpnII GATC 3 cut(s) 184, 500, 512
EaeI YGGCCR 1 cut(s) 256
Eam1104I CTCTTC 1 cut(s) 304
EarI CTCTTC 1 cut(s) 304
Ecl136II GAGCTC 1 cut(s) 216
Eco105I TACGTA 1 cut(s) 524
Eco130I CCWWGG 3 cut(s) 29, 114, 259
Eco147I AGGCCT 1 cut(s) 164
Eco24I GRGCYC 1 cut(s) 218
Eco31I GGTCTC 1 cut(s) 160
Eco47I GGWCC 2 cut(s) 4, 172
Eco53kI GAGCTC 1 cut(s) 216
EcoICRI GAGCTC 1 cut(s) 216
EcoO109I RGGNCCY 1 cut(s) 172
EcoRII CCWGG 1 cut(s) 168
EcoT14I CCWWGG 3 cut(s) 29, 114, 259
EcoT22I ATGCAT 1 cut(s) 468
EcoT38I GRGCYC 1 cut(s) 218
ErhI CCWWGG 3 cut(s) 29, 114, 259
FaeI CATG 1 cut(s) 263
FaiI YATR 8 cut(s) 204, 261, 267, 273, 279, 294, 457, 468
FatI CATG 1 cut(s) 259
Fnu4HI GCNGC 1 cut(s) 86
FokI GGATG 1 cut(s) 461
FriOI GRGCYC 1 cut(s) 218
Fsp4HI GCNGC 1 cut(s) 86
FspBI CTAG 1 cut(s) 246
GlaI GCGC 3 cut(s) 37, 194, 196
GluI GCNGC 1 cut(s) 86
GsaI CCCAGC 1 cut(s) 448
GsuI CTGGAG 2 cut(s) 342, 351
HaeIII GGCC 3 cut(s) 119, 164, 258
HapII CCGG 1 cut(s) 211
HgaI GACGC 1 cut(s) 382
HhaI GCGC 3 cut(s) 38, 195, 197
Hin1II CATG 1 cut(s) 263
Hin6I GCGC 3 cut(s) 36, 193, 195
HinP1I GCGC 3 cut(s) 36, 193, 195
HinfI GANTC 2 cut(s) 144, 391
HpaII CCGG 1 cut(s) 211
HphI GGTGA 1 cut(s) 91
Hpy188I TCNGA 4 cut(s) 143, 160, 390, 475
Hpy188III TCNNGA 5 cut(s) 67, 211, 321, 330, 370
Hpy99I CGWCG 2 cut(s) 185, 376
HpyCH4IV ACGT 2 cut(s) 366, 523
HpyCH4V TGCA 4 cut(s) 88, 239, 404, 466
HpyF10VI GCNNNNNNNGC 1 cut(s) 341
HpyF3I CTNAG 2 cut(s) 140, 415
HpySE526I ACGT 2 cut(s) 366, 523
Hsp92II CATG 1 cut(s) 263
HspAI GCGC 3 cut(s) 36, 193, 195
Kpn2I TCCGGA 1 cut(s) 210
Kzo9I GATC 3 cut(s) 184, 500, 512
LguI GCTCTTC 1 cut(s) 304
LmnI GCTCC 4 cut(s) 33, 213, 227, 332
Lsp1109I GCAGC 1 cut(s) 72
LweI GCATC 2 cut(s) 439, 453
MabI ACCWGGT 1 cut(s) 168
MaeI CTAG 1 cut(s) 246
MaeII ACGT 2 cut(s) 366, 523
MaeIII GTNAC 1 cut(s) 367
MalI GATC 3 cut(s) 186, 502, 514
MboI GATC 3 cut(s) 184, 500, 512
MboII GAAGA 5 cut(s) 59, 321, 377, 472, 500
MflI RGATCY 2 cut(s) 500, 512
MhlI GDGCHC 2 cut(s) 134, 218
MluCI AATT 5 cut(s) 205, 229, 250, 289, 469
Mph1103I ATGCAT 1 cut(s) 468
MroI TCCGGA 1 cut(s) 210
MseI TTAA 1 cut(s) 435
MslI CAYNNNNRTG 1 cut(s) 264
MspI CCGG 1 cut(s) 211
MspR9I CCNGG 1 cut(s) 170
MvaI CCWGG 1 cut(s) 170
MvnI CGCG 3 cut(s) 38, 195, 376
MwoI GCNNNNNNNGC 1 cut(s) 341
NcoI CCATGG 1 cut(s) 259
NdeII GATC 3 cut(s) 184, 500, 512
NlaIII CATG 1 cut(s) 263
NmuCI GTSAC 1 cut(s) 367
NsiI ATGCAT 1 cut(s) 468
PauI GCGCGC 1 cut(s) 193
PceI AGGCCT 1 cut(s) 164
PciSI GCTCTTC 1 cut(s) 304
PcsI WCGNNNNNNNCGW 1 cut(s) 377
PfeI GAWTC 2 cut(s) 144, 391
PkrI GCNGC 1 cut(s) 87
Ple19I CGATCG 1 cut(s) 187
Ppu21I YACGTR 1 cut(s) 524
PpuMI RGGWCCY 1 cut(s) 172
Psp124BI GAGCTC 1 cut(s) 218
Psp5II RGGWCCY 1 cut(s) 172
Psp6I CCWGG 1 cut(s) 168
PspFI CCCAGC 1 cut(s) 444
PspGI CCWGG 1 cut(s) 168
PspPI GGNCC 2 cut(s) 4, 172
PspPPI RGGWCCY 1 cut(s) 172
PsuI RGATCY 2 cut(s) 500, 512
PteI GCGCGC 1 cut(s) 193
PvuI CGATCG 1 cut(s) 187
RsaI GTAC 2 cut(s) 305, 522
RsaNI GTAC 2 cut(s) 304, 521
RseI CAYNNNNRTG 1 cut(s) 264
SacI GAGCTC 1 cut(s) 218
SapI GCTCTTC 1 cut(s) 304
SaqAI TTAA 1 cut(s) 435
SatI GCNGC 1 cut(s) 86
Sau3AI GATC 3 cut(s) 184, 500, 512
Sau96I GGNCC 2 cut(s) 4, 172
ScrFI CCNGG 1 cut(s) 170
SduI GDGCHC 2 cut(s) 134, 218
SetI ASST 8 cut(s) 18, 87, 156, 174, 218, 337, 369, 526
SexAI ACCWGGT 1 cut(s) 168
SfaNI GCATC 2 cut(s) 439, 453
SinI GGWCC 2 cut(s) 4, 172
SmiMI CAYNNNNRTG 1 cut(s) 264
SnaBI TACGTA 1 cut(s) 524
SpeI ACTAGT 1 cut(s) 245
Sse9I AATT 5 cut(s) 205, 229, 250, 289, 469
SseBI AGGCCT 1 cut(s) 164
SsiI CCGC 1 cut(s) 77
SspMI CTAG 1 cut(s) 246
SstI GAGCTC 1 cut(s) 218
StuI AGGCCT 1 cut(s) 164
StyD4I CCNGG 1 cut(s) 168
StyI CCWWGG 3 cut(s) 29, 114, 259
TaiI ACGT 2 cut(s) 369, 526
TaqI TCGA 1 cut(s) 180
TasI AATT 5 cut(s) 205, 229, 250, 289, 469
TatI WGTACW 1 cut(s) 303
TfiI GAWTC 2 cut(s) 144, 391
Tru1I TTAA 1 cut(s) 435
Tru9I TTAA 1 cut(s) 435
TseFI GTSAC 1 cut(s) 367
TseI GCWGC 1 cut(s) 85
Tsp45I GTSAC 1 cut(s) 367
TspGWI ACGGA 1 cut(s) 388
VpaK11BI GGWCC 2 cut(s) 4, 172
XspI CTAG 1 cut(s) 246
Zsp2I ATGCAT 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.