Carboxyl transferase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | ATCG00500 |
| malus_domestica | MD02G1049400.v1.1 MD02G1213300.v1.1 |
| prunus_persica | Prupe.7G029700_v2.0.a1 |
| pyrus_communis | pycom04g07530 pycom08g12660 pycom12397g00240 |
| rosa_chinensis | RchiOBHm_Chr5g0042991 RchiOBHm_Chr6g0281331 RchiOBHm_Chr6g0281341 RchiOBHm_CPg0502101 |
| rosa_rugosa | RorugMtG0002500.1 |
| rosa_samantha | Rh5BG294700 Rh5DG304500 Rh6DG246700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 272 |
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AfaI | GTAC | 2 cut(s) | 228, 288 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 113, 117, 305 |
| AgsI | TTSAA | 2 cut(s) | 206, 217 |
| AlwI | GGATC | 1 cut(s) | 272 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 230 |
| AoxI | GGCC | 1 cut(s) | 126 |
| AsuHPI | GGTGA | 1 cut(s) | 133 |
| AxyI | CCTNAGG | 1 cut(s) | 231 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 152, 186 |
| BmsI | GCATC | 1 cut(s) | 15 |
| BsaAI | YACGTR | 1 cut(s) | 293 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 113, 117, 305 |
| Bse1I | ACTGG | 1 cut(s) | 129 |
| Bse21I | CCTNAGG | 1 cut(s) | 231 |
| Bse3DI | GCAATG | 1 cut(s) | 177 |
| BseGI | GGATG | 1 cut(s) | 101 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 113, 117, 305 |
| BseMI | GCAATG | 1 cut(s) | 177 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseNI | ACTGG | 1 cut(s) | 129 |
| BshFI | GGCC | 1 cut(s) | 128 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 113, 117, 305 |
| BsnI | GGCC | 1 cut(s) | 128 |
| Bsp143I | GATC | 1 cut(s) | 277 |
| BspANI | GGCC | 1 cut(s) | 128 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspPI | GGATC | 1 cut(s) | 272 |
| BsrDI | GCAATG | 1 cut(s) | 177 |
| BsrI | ACTGG | 1 cut(s) | 129 |
| BssMI | GATC | 1 cut(s) | 277 |
| Bst4CI | ACNGT | 1 cut(s) | 226 |
| BstBAI | YACGTR | 1 cut(s) | 293 |
| BstDEI | CTNAG | 1 cut(s) | 231 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 111 |
| BstF5I | GGATG | 1 cut(s) | 101 |
| BstKTI | GATC | 1 cut(s) | 280 |
| BstMBI | GATC | 1 cut(s) | 277 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 179 |
| Bsu36I | CCTNAGG | 1 cut(s) | 231 |
| BsuRI | GGCC | 1 cut(s) | 128 |
| BtsCI | GGATG | 1 cut(s) | 101 |
| CaiI | CAGNNNCTG | 1 cut(s) | 230 |
| Csp6I | GTAC | 2 cut(s) | 227, 287 |
| CviJI | RGCY | 4 cut(s) | 21, 35, 128, 270 |
| CviKI_1 | RGCY | 4 cut(s) | 21, 35, 128, 270 |
| CviQI | GTAC | 2 cut(s) | 227, 287 |
| DdeI | CTNAG | 1 cut(s) | 231 |
| DpnI | GATC | 1 cut(s) | 279 |
| DpnII | GATC | 1 cut(s) | 277 |
| DraI | TTTAAA | 1 cut(s) | 303 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| Eco32I | GATATC | 1 cut(s) | 151 |
| Eco81I | CCTNAGG | 1 cut(s) | 231 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 111 |
| EcoRV | GATATC | 1 cut(s) | 151 |
| FaiI | YATR | 4 cut(s) | 55, 57, 87, 140 |
| FokI | GGATG | 1 cut(s) | 88 |
| HaeIII | GGCC | 1 cut(s) | 128 |
| HinfI | GANTC | 1 cut(s) | 236 |
| HphI | GGTGA | 1 cut(s) | 133 |
| HpyCH4III | ACNGT | 1 cut(s) | 226 |
| HpyCH4IV | ACGT | 1 cut(s) | 292 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 28, 182 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 179 |
| HpyF3I | CTNAG | 1 cut(s) | 231 |
| HpySE526I | ACGT | 1 cut(s) | 292 |
| Kzo9I | GATC | 1 cut(s) | 277 |
| LpnPI | CCDG | 4 cut(s) | 35, 99, 142, 243 |
| LweI | GCATC | 1 cut(s) | 15 |
| MaeII | ACGT | 1 cut(s) | 292 |
| MaeIII | GTNAC | 2 cut(s) | 121, 244 |
| MalI | GATC | 1 cut(s) | 279 |
| MboI | GATC | 1 cut(s) | 277 |
| MboII | GAAGA | 1 cut(s) | 36 |
| MluCI | AATT | 2 cut(s) | 77, 201 |
| MnlI | CCTC | 1 cut(s) | 226 |
| MseI | TTAA | 1 cut(s) | 302 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 179 |
| NdeII | GATC | 1 cut(s) | 277 |
| NmuCI | GTSAC | 2 cut(s) | 121, 244 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 282 |
| PfeI | GAWTC | 1 cut(s) | 236 |
| Ppu21I | YACGTR | 1 cut(s) | 293 |
| PstNI | CAGNNNCTG | 1 cut(s) | 230 |
| RsaI | GTAC | 2 cut(s) | 228, 288 |
| RsaNI | GTAC | 2 cut(s) | 227, 287 |
| SaqAI | TTAA | 1 cut(s) | 302 |
| Sau3AI | GATC | 1 cut(s) | 277 |
| SetI | ASST | 3 cut(s) | 118, 232, 295 |
| SfaNI | GCATC | 1 cut(s) | 15 |
| SgeI | CNNG | 8 cut(s) | 17, 34, 126, 141, 242, 254, 277, 303 |
| Sse9I | AATT | 2 cut(s) | 77, 201 |
| SspI | AATATT | 1 cut(s) | 254 |
| TaaI | ACNGT | 1 cut(s) | 226 |
| TaiI | ACGT | 1 cut(s) | 295 |
| TaqI | TCGA | 1 cut(s) | 276 |
| TasI | AATT | 2 cut(s) | 77, 201 |
| TfiI | GAWTC | 1 cut(s) | 236 |
| Tru1I | TTAA | 1 cut(s) | 302 |
| Tru9I | TTAA | 1 cut(s) | 302 |
| TseFI | GTSAC | 2 cut(s) | 121, 244 |
| Tsp45I | GTSAC | 2 cut(s) | 121, 244 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 111 |