Rh6DG246700

Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
43327936 .. 43378431
50496 bp
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UTR
Exon/CDS
Intron
Rh6DG246700.1

Sequence Viewer

Length: 315 bp
ATGATGGTTGTCTCCTTCCCGGCTCTCTCTCACTCTAATGCTCCATCTTCATCCCGCCAACCGACCACGTGGGTAACGACTAGTTTTGGTATGTTGGGAGATATCATTATTGCTAAACCCAACGCTTACATCGCATTTGTGGGTAAAAGAGTAATTGAACAAACATTGAATCAGGCAGTACCCAAGGATTCACAAGTGGTTGAATATTTATTCCATAAGGGCTTATTCGATCCAATCATACCATGTAATCCTTTAAAGGGCGTTCTGAGTGAATTATTTCGACTACATGCTTTCTTTCCTTTGAATCAAACTTAG
Functional Annotation

Protein Analysis

104

Amino Acids

11.53

Weight (kDa)

8.93

Isoelectric Point (pI)

36.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 55
AclWI GGATC 1 cut(s) 224
AcvI CACGTG 1 cut(s) 69
AfaI GTAC 1 cut(s) 180
AfiI CCNNNNNNNGG 1 cut(s) 257
AgsI TTSAA 4 cut(s) 158, 169, 203, 304
AhlI ACTAGT 1 cut(s) 80
Alw26I GTCTC 1 cut(s) 16
AlwI GGATC 1 cut(s) 224
Asp700I GAANNNNTTC 1 cut(s) 276
AsuC2I CCSGG 1 cut(s) 20
BbrPI CACGTG 1 cut(s) 69
BccI CCATC 1 cut(s) 52
BcnI CCSGG 1 cut(s) 20
BcoDI GTCTC 1 cut(s) 16
BcuI ACTAGT 1 cut(s) 80
BfaI CTAG 1 cut(s) 81
Bme1390I CCNGG 1 cut(s) 20
BmrFI CCNGG 1 cut(s) 20
BpuMI CCSGG 1 cut(s) 20
BsaAI YACGTR 1 cut(s) 69
BsaJI CCNNGG 1 cut(s) 183
Bsc4I CCNNNNNNNGG 1 cut(s) 257
BseDI CCNNGG 1 cut(s) 183
BseGI GGATG 1 cut(s) 50
BseLI CCNNNNNNNGG 1 cut(s) 257
BseMII CTCAG 1 cut(s) 257
BsiSI CCGG 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 257
BsmAI GTCTC 1 cut(s) 16
Bsp143I GATC 1 cut(s) 229
BspACI CCGC 1 cut(s) 55
BspCNI CTCAG 1 cut(s) 258
BspPI GGATC 1 cut(s) 224
BssECI CCNNGG 1 cut(s) 183
BssMI GATC 1 cut(s) 229
BssT1I CCWWGG 1 cut(s) 183
BstBAI YACGTR 1 cut(s) 69
BstDEI CTNAG 2 cut(s) 266, 312
BstF5I GGATG 1 cut(s) 50
BstKTI GATC 1 cut(s) 232
BstMAI GTCTC 1 cut(s) 16
BstMBI GATC 1 cut(s) 229
BstMWI GCNNNNNNNGC 1 cut(s) 131
BstNSI RCATGY 1 cut(s) 290
BstSCI CCNGG 1 cut(s) 18
BtgZI GCGATG 1 cut(s) 115
BtsCI GGATG 1 cut(s) 50
Csp6I GTAC 1 cut(s) 179
CviAII CATG 2 cut(s) 243, 287
CviJI RGCY 2 cut(s) 23, 222
CviKI_1 RGCY 2 cut(s) 23, 222
CviQI GTAC 1 cut(s) 179
DdeI CTNAG 2 cut(s) 266, 312
DpnI GATC 1 cut(s) 231
DpnII GATC 1 cut(s) 229
DraI TTTAAA 1 cut(s) 255
Eco130I CCWWGG 1 cut(s) 183
Eco32I GATATC 1 cut(s) 103
Eco72I CACGTG 1 cut(s) 69
EcoRV GATATC 1 cut(s) 103
EcoT14I CCWWGG 1 cut(s) 183
ErhI CCWWGG 1 cut(s) 183
FaeI CATG 2 cut(s) 246, 290
FaiI YATR 5 cut(s) 92, 216, 239, 244, 288
FatI CATG 2 cut(s) 242, 286
FauI CCCGC 1 cut(s) 62
FokI GGATG 1 cut(s) 37
FspBI CTAG 1 cut(s) 81
HapII CCGG 1 cut(s) 20
Hin1II CATG 2 cut(s) 246, 290
HinfI GANTC 3 cut(s) 169, 188, 304
HpaII CCGG 1 cut(s) 20
Hpy188I TCNGA 1 cut(s) 267
HpyAV CCTTC 1 cut(s) 25
HpyCH4IV ACGT 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
HpyF3I CTNAG 2 cut(s) 266, 312
HpySE526I ACGT 1 cut(s) 68
Hsp92II CATG 2 cut(s) 246, 290
Kzo9I GATC 1 cut(s) 229
LmnI GCTCC 1 cut(s) 46
LpnPI CCDG 2 cut(s) 33, 158
MaeI CTAG 1 cut(s) 81
MaeII ACGT 1 cut(s) 68
MaeIII GTNAC 1 cut(s) 73
MalI GATC 1 cut(s) 231
MboI GATC 1 cut(s) 229
MboII GAAGA 1 cut(s) 39
MluCI AATT 2 cut(s) 153, 272
MroXI GAANNNNTTC 1 cut(s) 276
MseI TTAA 1 cut(s) 254
MslI CAYNNNNRTG 1 cut(s) 36
MspI CCGG 1 cut(s) 20
MspR9I CCNGG 1 cut(s) 20
MwoI GCNNNNNNNGC 1 cut(s) 131
NciI CCSGG 1 cut(s) 20
NdeII GATC 1 cut(s) 229
NlaIII CATG 2 cut(s) 246, 290
NspI RCATGY 1 cut(s) 290
PcsI WCGNNNNNNNCGW 1 cut(s) 74
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 3 cut(s) 169, 188, 304
PmaCI CACGTG 1 cut(s) 69
PmlI CACGTG 1 cut(s) 69
Ppu21I YACGTR 1 cut(s) 69
PspCI CACGTG 1 cut(s) 69
RsaI GTAC 1 cut(s) 180
RsaNI GTAC 1 cut(s) 179
RseI CAYNNNNRTG 1 cut(s) 36
SaqAI TTAA 1 cut(s) 254
Sau3AI GATC 1 cut(s) 229
ScrFI CCNGG 1 cut(s) 20
SetI ASST 1 cut(s) 71
SmiMI CAYNNNNRTG 1 cut(s) 36
SpeI ACTAGT 1 cut(s) 80
Sse9I AATT 2 cut(s) 153, 272
SsiI CCGC 1 cut(s) 55
SspI AATATT 1 cut(s) 206
SspMI CTAG 1 cut(s) 81
StyD4I CCNGG 1 cut(s) 18
StyI CCWWGG 1 cut(s) 183
TaiI ACGT 1 cut(s) 71
TaqI TCGA 2 cut(s) 228, 280
TasI AATT 2 cut(s) 153, 272
TfiI GAWTC 3 cut(s) 169, 188, 304
Tru1I TTAA 1 cut(s) 254
Tru9I TTAA 1 cut(s) 254
TspDTI ATGAA 1 cut(s) 39
XceI RCATGY 1 cut(s) 290
XmnI GAANNNNTTC 1 cut(s) 276
XspI CTAG 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.