pycom08g12660

Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
11135219 .. 11135508
290 bp
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UTR
Exon/CDS
Intron
pycom08g12660.1

Sequence Viewer

Length: 246 bp
ATGGCCGACAAGATATGGCTTCACTTGACGAAGTCAACTAAACGGTATTCCGTAGCAATTGGTGTTATGGATTTTCAGTTTATGGGTGGTAATATGGGATCTGTAGTGGGTGAAAAAATCACACTGTGTGCTTCCGGAGGAGCACACATGCAAGAAGGAAGCTTGAGCTTGATGCAAATGGCTAAAATATGTTCAGCTTTGTATGATTGTCAATTAAATAAAAAGTTATTTTATGTAGCGAAATAA
Functional Annotation

Protein Analysis

82

Amino Acids

8.88

Weight (kDa)

9.12

Isoelectric Point (pI)

16.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 134
AclWI GGATC 1 cut(s) 106
AcoI YGGCCR 1 cut(s) 3
AdeI CACNNNGTG 2 cut(s) 126, 128
AluBI AGCT 3 cut(s) 162, 168, 197
AluI AGCT 3 cut(s) 162, 168, 197
Alw21I GWGCWC 1 cut(s) 145
AlwI GGATC 1 cut(s) 106
Aor13HI TCCGGA 1 cut(s) 134
AoxI GGCC 1 cut(s) 3
AsuHPI GGTGA 1 cut(s) 122
Bbv12I GWGCWC 1 cut(s) 145
BfmI CTRYAG 1 cut(s) 102
BmsI GCATC 1 cut(s) 162
BpuEI CTTGAG 1 cut(s) 184
BsaWI WCCGGW 1 cut(s) 134
BseAI TCCGGA 1 cut(s) 134
BseRI GAGGAG 1 cut(s) 153
BshFI GGCC 1 cut(s) 5
BsiHKAI GWGCWC 1 cut(s) 145
BsiSI CCGG 1 cut(s) 135
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 1 cut(s) 145
Bsp13I TCCGGA 1 cut(s) 134
Bsp143I GATC 1 cut(s) 98
BspANI GGCC 1 cut(s) 5
BspEI TCCGGA 1 cut(s) 134
BspPI GGATC 1 cut(s) 106
BssMI GATC 1 cut(s) 98
Bst4CI ACNGT 2 cut(s) 45, 126
BstKTI GATC 1 cut(s) 101
BstMBI GATC 1 cut(s) 98
BstNSI RCATGY 1 cut(s) 151
BstSFI CTRYAG 1 cut(s) 102
BstX2I RGATCY 1 cut(s) 98
BstYI RGATCY 1 cut(s) 98
BsuRI GGCC 1 cut(s) 5
BtsIMutI CAGTG 1 cut(s) 122
CviAII CATG 1 cut(s) 148
CviJI RGCY 6 cut(s) 5, 19, 162, 168, 182, 197
CviKI_1 RGCY 6 cut(s) 5, 19, 162, 168, 182, 197
DpnI GATC 1 cut(s) 100
DpnII GATC 1 cut(s) 98
DraIII CACNNNGTG 2 cut(s) 126, 128
EaeI YGGCCR 1 cut(s) 3
FaeI CATG 1 cut(s) 151
FaiI YATR 8 cut(s) 16, 68, 83, 95, 149, 190, 204, 234
FatI CATG 1 cut(s) 147
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 135
Hin1II CATG 1 cut(s) 151
HincII GTYRAC 1 cut(s) 36
HindII GTYRAC 1 cut(s) 36
HindIII AAGCTT 1 cut(s) 160
HpaII CCGG 1 cut(s) 135
HphI GGTGA 1 cut(s) 122
Hpy166II GTNNAC 1 cut(s) 36
Hpy188III TCNNGA 1 cut(s) 135
Hpy8I GTNNAC 1 cut(s) 36
HpyAV CCTTC 1 cut(s) 149
HpyCH4III ACNGT 2 cut(s) 45, 126
HpyCH4V TGCA 2 cut(s) 151, 175
Hsp92II CATG 1 cut(s) 151
Kpn2I TCCGGA 1 cut(s) 134
Kzo9I GATC 1 cut(s) 98
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 1 cut(s) 148
LweI GCATC 1 cut(s) 162
MalI GATC 1 cut(s) 100
MboI GATC 1 cut(s) 98
MfeI CAATTG 1 cut(s) 57
MflI RGATCY 1 cut(s) 98
MhlI GDGCHC 1 cut(s) 145
MluCI AATT 2 cut(s) 57, 212
MnlI CCTC 1 cut(s) 131
MroI TCCGGA 1 cut(s) 134
MseI TTAA 1 cut(s) 215
MspI CCGG 1 cut(s) 135
MunI CAATTG 1 cut(s) 57
NdeII GATC 1 cut(s) 98
NlaIII CATG 1 cut(s) 151
NspI RCATGY 1 cut(s) 151
PflFI GACNNNGTC 1 cut(s) 31
PsuI RGATCY 1 cut(s) 98
PsyI GACNNNGTC 1 cut(s) 31
SaqAI TTAA 1 cut(s) 215
Sau3AI GATC 1 cut(s) 98
SduI GDGCHC 1 cut(s) 145
SetI ASST 3 cut(s) 164, 170, 199
SfaNI GCATC 1 cut(s) 162
SfcI CTRYAG 1 cut(s) 102
SgeI CNNG 7 cut(s) 22, 37, 147, 160, 164, 175, 181
SmlI CTYRAG 1 cut(s) 163
SmoI CTYRAG 1 cut(s) 163
Sse9I AATT 2 cut(s) 57, 212
TaaI ACNGT 2 cut(s) 45, 126
TasI AATT 2 cut(s) 57, 212
Tru1I TTAA 1 cut(s) 215
Tru9I TTAA 1 cut(s) 215
TscAI CASTG 1 cut(s) 129
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 1 cut(s) 129
Tth111I GACNNNGTC 1 cut(s) 31
XceI RCATGY 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.