Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006307

Physical Location & Seq

Genomic Coordinates Forward (+)

8606838 .. 8609422

Gene Structure 2585 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G049200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 453 bp

ATGGCACTGGTTTCAGGAGGATCAACGTTGAACCCGAATGCCCCACTCTTTATCCCTGCTGCTCTTAAGCAGGTGGAGGATTTCTCCCCTGAATGGTGGCAACTGGTTACCACTTCCACATGGTACCACGACTACTGGCTCAGTCAACAGGGTGAGGATGGCTTTTATGATAATGCCCAGGGTGACGTTGACAATGTCGCAGATTTGCTTCCAGAGACCTTTGATCTCGATGCTGGTGAGGACTTCTCCAGTTTAGAAGCTCAGTTTGAGGAGTTTCTTCAATTGTCTCAGACTGAAAGTAAAAATGGGTTGGAAACAAGTACTGCGGTCTTGAAGAATTTGAAATCACTGGAAGACAAACGTTCCCCAGTGGAGCCAAGGAGGTATGCTGAGAAGCCTGCCAAGCATGTGAGCCCGAAATGCAGCCCCCGCTTCATCCAGCAGCCCCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0008150 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009642 GO:0009644 GO:0010035 GO:0042221 GO:0043207 GO:0044424 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAM2

Protein Analysis

151

Amino Acids

16.93

Weight (kDa)

4.5

Isoelectric Point (pI)

58.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006307)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G41430 AT2G41430 AT2G41430 AT2G41430 AT2G41430
fragaria_vesca	FvH4_6g24790 FvH4_6g24790
malus_domestica	MD14G1081500.v1.1
prunus_persica	Prupe.7G049200_v2.0.a1 Prupe.7G049200_v2.0.a1
pyrus_communis	pycom12g07430 pycom14g07080
rosa_chinensis	RchiOBHm_Chr2g0124241
rosa_laevigata	RLG00000018791 RLG00000018799
rosa_multiflora	Rmu_co8344463.1_g000001 Rmu_sc0002968.1_g000006 Rmu_sc0005472.1_g000018
rosa_roxburghii	Rroxscaffold_2G00120020
rosa_rugosa	Rorug02G0250400 Rorug02G0250400 Rorug02G0250500.1
rosa_samantha	Rh2BG317800 Rh2CG296200 Rh2CG301200 Rh2DG333300
rosa_wichuraiana	Rw2G024910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	61
Acc36I	ACCTGC	1 cut(s)	61
Acc65I	GGTACC	1 cut(s)	123
AccB1I	GGYRCC	1 cut(s)	123
AciI	CCGC	2 cut(s)	326, 430
AclI	AACGTT	2 cut(s)	26, 361
AclWI	GGATC	1 cut(s)	28
AcsI	RAATTY	1 cut(s)	337
AfaI	GTAC	2 cut(s)	125, 322
AfiI	CCNNNNNNNGG	1 cut(s)	93
AflII	CTTAAG	1 cut(s)	65
AgsI	TTSAA	4 cut(s)	31, 281, 334, 343
AjnI	CCWGG	1 cut(s)	177
AluBI	AGCT	1 cut(s)	260
AluI	AGCT	1 cut(s)	260
Alw26I	GTCTC	2 cut(s)	209, 291
AlwI	GGATC	1 cut(s)	28
ApeKI	GCWGC	3 cut(s)	59, 423, 442
ApoI	RAATTY	1 cut(s)	337
Asp718I	GGTACC	1 cut(s)	123
AsuHPI	GGTGA	3 cut(s)	164, 194, 248
BanI	GGYRCC	1 cut(s)	123
BanII	GRGCYC	1 cut(s)	416
BbsI	GAAGAC	1 cut(s)	360
BbvI	GCAGC	2 cut(s)	46, 435
BccI	CCATC	1 cut(s)	152
BciT130I	CCWGG	1 cut(s)	179
BcoDI	GTCTC	2 cut(s)	209, 291
BfrI	CTTAAG	1 cut(s)	65
BfuAI	ACCTGC	1 cut(s)	61
BisI	GCNGC	3 cut(s)	60, 424, 443
BlsI	GCNGC	3 cut(s)	61, 425, 444
BmcAI	AGTACT	1 cut(s)	322
Bme1390I	CCNGG	1 cut(s)	179
BmiI	GGNNCC	2 cut(s)	125, 375
BmrFI	CCNGG	1 cut(s)	179
BmrI	ACTGGG	1 cut(s)	362
BmsI	GCATC	1 cut(s)	220
BmuI	ACTGGG	1 cut(s)	362
BpiI	GAAGAC	1 cut(s)	360
BplI	GAGNNNNNCTC	4 cut(s)	68, 100, 230, 262
BpmI	CTGGAG	1 cut(s)	232
BsaI	GGTCTC	1 cut(s)	209
BsaJI	CCNNGG	3 cut(s)	177, 178, 377
Bsc4I	CCNNNNNNNGG	1 cut(s)	93
Bse1I	ACTGG	6 cut(s)	12, 108, 140, 249, 354, 368
BseBI	CCWGG	1 cut(s)	179
BseDI	CCNNGG	3 cut(s)	177, 178, 377
BseGI	GGATG	2 cut(s)	163, 435
BseLI	CCNNNNNNNGG	1 cut(s)	93
BseMII	CTCAG	4 cut(s)	154, 275, 302, 381
BseNI	ACTGG	6 cut(s)	12, 108, 140, 249, 354, 368
BseRI	GAGGAG	1 cut(s)	284
BseXI	GCAGC	2 cut(s)	46, 435
BshNI	GGYRCC	1 cut(s)	123
BslI	CCNNNNNNNGG	1 cut(s)	93
BsmAI	GTCTC	2 cut(s)	209, 291
BsmI	GAATGC	1 cut(s)	43
Bso31I	GGTCTC	1 cut(s)	209
Bsp1286I	GDGCHC	1 cut(s)	416
Bsp143I	GATC	2 cut(s)	20, 223
BspACI	CCGC	2 cut(s)	326, 430
BspCNI	CTCAG	4 cut(s)	153, 274, 301, 382
BspLI	GGNNCC	2 cut(s)	125, 375
BspMI	ACCTGC	1 cut(s)	61
BspPI	GGATC	1 cut(s)	28
BspT107I	GGYRCC	1 cut(s)	123
BspTI	CTTAAG	1 cut(s)	65
BspTNI	GGTCTC	1 cut(s)	209
BsrI	ACTGG	6 cut(s)	12, 108, 140, 249, 354, 368
BssECI	CCNNGG	3 cut(s)	177, 178, 377
BssMI	GATC	2 cut(s)	20, 223
BssT1I	CCWWGG	1 cut(s)	377
Bst2UI	CCWGG	1 cut(s)	179
BstAFI	CTTAAG	1 cut(s)	65
BstC8I	GCNNGC	1 cut(s)	399
BstDEI	CTNAG	4 cut(s)	140, 261, 288, 390
BstEII	GGTNACC	1 cut(s)	106
BstF5I	GGATG	2 cut(s)	163, 435
BstKTI	GATC	2 cut(s)	23, 226
BstMAI	GTCTC	2 cut(s)	209, 291
BstMBI	GATC	2 cut(s)	20, 223
BstMWI	GCNNNNNNNGC	3 cut(s)	403, 420, 429
BstNI	CCWGG	1 cut(s)	179
BstNSI	RCATGY	1 cut(s)	410
BstPI	GGTNACC	1 cut(s)	106
BstSCI	CCNGG	1 cut(s)	177
BstV1I	GCAGC	2 cut(s)	46, 435
BstV2I	GAAGAC	1 cut(s)	360
BtsCI	GGATG	2 cut(s)	163, 435
BtsIMutI	CAGTG	3 cut(s)	5, 347, 375
BveI	ACCTGC	1 cut(s)	61
Cac8I	GCNNGC	1 cut(s)	399
Csp6I	GTAC	2 cut(s)	124, 321
CviAII	CATG	2 cut(s)	120, 407
CviJI	RGCY	8 cut(s)	139, 162, 260, 376, 397, 414, 426, 445
CviKI_1	RGCY	8 cut(s)	139, 162, 260, 376, 397, 414, 426, 445
CviQI	GTAC	2 cut(s)	124, 321
DdeI	CTNAG	4 cut(s)	140, 261, 288, 390
DpnI	GATC	2 cut(s)	22, 225
DpnII	GATC	2 cut(s)	20, 223
Eco130I	CCWWGG	1 cut(s)	377
Eco24I	GRGCYC	1 cut(s)	416
Eco31I	GGTCTC	1 cut(s)	209
Eco91I	GGTNACC	1 cut(s)	106
EcoO65I	GGTNACC	1 cut(s)	106
EcoRII	CCWGG	1 cut(s)	177
EcoT14I	CCWWGG	1 cut(s)	377
EcoT38I	GRGCYC	1 cut(s)	416
ErhI	CCWWGG	1 cut(s)	377
FaeI	CATG	2 cut(s)	123, 410
FaiI	YATR	4 cut(s)	121, 168, 387, 408
FatI	CATG	2 cut(s)	119, 406
FauI	CCCGC	1 cut(s)	437
Fnu4HI	GCNGC	3 cut(s)	60, 424, 443
FokI	GGATG	2 cut(s)	170, 422
FriOI	GRGCYC	1 cut(s)	416
Fsp4HI	GCNGC	3 cut(s)	60, 424, 443
GluI	GCNGC	3 cut(s)	60, 424, 443
GsuI	CTGGAG	1 cut(s)	232
Hin1II	CATG	2 cut(s)	123, 410
HincII	GTYRAC	2 cut(s)	146, 190
HindII	GTYRAC	2 cut(s)	146, 190
HphI	GGTGA	3 cut(s)	164, 194, 248
Hpy166II	GTNNAC	2 cut(s)	146, 190
Hpy188I	TCNGA	1 cut(s)	291
Hpy188III	TCNNGA	4 cut(s)	15, 212, 227, 331
Hpy8I	GTNNAC	2 cut(s)	146, 190
HpyCH4IV	ACGT	3 cut(s)	26, 186, 361
HpyCH4V	TGCA	1 cut(s)	423
HpyF10VI	GCNNNNNNNGC	3 cut(s)	403, 420, 429
HpyF3I	CTNAG	4 cut(s)	140, 261, 288, 390
HpySE526I	ACGT	3 cut(s)	26, 186, 361
Hsp92II	CATG	2 cut(s)	123, 410
KpnI	GGTACC	1 cut(s)	127
Kzo9I	GATC	2 cut(s)	20, 223
LmnI	GCTCC	1 cut(s)	373
Lsp1109I	GCAGC	2 cut(s)	46, 435
LweI	GCATC	1 cut(s)	220
MaeII	ACGT	3 cut(s)	26, 186, 361
MaeIII	GTNAC	2 cut(s)	106, 182
MalI	GATC	2 cut(s)	22, 225
MboI	GATC	2 cut(s)	20, 223
MboII	GAAGA	3 cut(s)	269, 346, 365
MfeI	CAATTG	1 cut(s)	281
MhlI	GDGCHC	1 cut(s)	416
MluCI	AATT	2 cut(s)	281, 337
MmeI	TCCRAC	1 cut(s)	291
MnlI	CCTC	6 cut(s)	11, 70, 148, 232, 262, 375
MseI	TTAA	1 cut(s)	66
MspCI	CTTAAG	1 cut(s)	65
MspR9I	CCNGG	1 cut(s)	179
MunI	CAATTG	1 cut(s)	281
Mva1269I	GAATGC	1 cut(s)	43
MvaI	CCWGG	1 cut(s)	179
MwoI	GCNNNNNNNGC	3 cut(s)	403, 420, 429
NdeII	GATC	2 cut(s)	20, 223
NlaIII	CATG	2 cut(s)	123, 410
NlaIV	GGNNCC	2 cut(s)	125, 375
NmuCI	GTSAC	1 cut(s)	182
NspI	RCATGY	1 cut(s)	410
PaqCI	CACCTGC	1 cut(s)	61
PasI	CCCWGGG	1 cut(s)	178
PcsI	WCGNNNNNNNCGW	1 cut(s)	32
PctI	GAATGC	1 cut(s)	43
PflFI	GACNNNGTC	1 cut(s)	194
PkrI	GCNGC	3 cut(s)	61, 425, 444
Psp1406I	AACGTT	2 cut(s)	26, 361
Psp6I	CCWGG	1 cut(s)	177
PspEI	GGTNACC	1 cut(s)	106
PspGI	CCWGG	1 cut(s)	177
PspN4I	GGNNCC	2 cut(s)	125, 375
PsyI	GACNNNGTC	1 cut(s)	194
RsaI	GTAC	2 cut(s)	125, 322
RsaNI	GTAC	2 cut(s)	124, 321
SaqAI	TTAA	1 cut(s)	66
SatI	GCNGC	3 cut(s)	60, 424, 443
Sau3AI	GATC	2 cut(s)	20, 223
ScaI	AGTACT	1 cut(s)	322
ScrFI	CCNGG	1 cut(s)	179
SduI	GDGCHC	1 cut(s)	416
SetI	ASST	7 cut(s)	29, 75, 189, 221, 262, 364, 386
SfaNI	GCATC	1 cut(s)	220
SmlI	CTYRAG	1 cut(s)	65
SmoI	CTYRAG	1 cut(s)	65
Sse9I	AATT	2 cut(s)	281, 337
SsiI	CCGC	2 cut(s)	326, 430
StyD4I	CCNGG	1 cut(s)	177
StyI	CCWWGG	1 cut(s)	377
TaiI	ACGT	3 cut(s)	29, 189, 364
TaqI	TCGA	1 cut(s)	228
TasI	AATT	2 cut(s)	281, 337
TatI	WGTACW	1 cut(s)	320
Tru1I	TTAA	1 cut(s)	66
Tru9I	TTAA	1 cut(s)	66
TscAI	CASTG	3 cut(s)	12, 354, 375
TseFI	GTSAC	1 cut(s)	182
TseI	GCWGC	3 cut(s)	59, 423, 442
Tsp45I	GTSAC	1 cut(s)	182
TspDTI	ATGAA	1 cut(s)	424
TspRI	CASTG	3 cut(s)	12, 354, 375
Tth111I	GACNNNGTC	1 cut(s)	194
Vha464I	CTTAAG	1 cut(s)	65
XapI	RAATTY	1 cut(s)	337
XceI	RCATGY	1 cut(s)	410
ZrmI	AGTACT	1 cut(s)	322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.