Prupe.7G059700_v2.0.a1

Protein N-terminal glutamine

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0014502
Physical Location & Seq
Forward (+)
9889794 .. 9891677
1884 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G059700.1

Sequence Viewer

Length: 678 bp
ATGACGACGTCAGAGTTGGAAGTAAGCGGCAGCTCGTGGGACGTCTCTCAATTTCAACACACCCCTTTTTACTGTGAGGAGAATGTGTACTTGCTTTGCAAGGAACTGGGCACAAAGGGCATAGCAGATGCCCAAAGTTCTGATCTTTTTGTTGTTTTCATTTCCAATGAGAAAAAACAGATCCCATTGTGGCATCAGAAAGCCAGCAGCCGAGCAGATGGGATTGTTCTCTGGGATTATCATGTCATTTGCATACAGAGAAAAGGCAGAGGTGACTCACCCTCCCCACACTTAGTGTGGGATTTAGATTCAAGTCTTCCATTTCCTTGTCCCTTAGCACGCTATGTCTCCGAAACTATCCGCCCCGACTTTCAGACCTTTTCTGAATTCCAAAGGTATTTCCGGATTGTGCATGCCCCCGTGTTTCTCCGTTGCTTTGCATCTGATAGGAGACACATGAAAGATTCTGTTGGCAATTGGCTACATCAACCTCCCCTCTACCAGCCCATTGTTGCGGAGGATGGAACTCTTCACAACCTGAATGACTACTTCGACATCCGTGCTACAGATGCAGTGACAGGTACAGGAGCTGATATGACCAATGAAGTTTTTACCAAAAAGCTTGGTGTGGTCATAACAGAAAGCCAACTGGAGGAGTTCTTTTCCCAAATTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Nt_Gln_amidase

Protein Analysis

226

Amino Acids

25.74

Weight (kDa)

5.31

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014502)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G41760
fragaria_vesca FvH4_6g23850
malus_domestica MD12G1074200.v1.1
prunus_persica Prupe.7G059700_v2.0.a1
pyrus_communis pycom12g06400
rosa_chinensis RchiOBHm_Chr3g0482531
rosa_laevigata RLG00000023347
rosa_multiflora Rmu_sc0002969.1_g000011 Rmu_sc0005613.1_g000003
rosa_roxburghii Rroxscaffold_6G00399310
rosa_rugosa Rorug03G0196700
rosa_samantha Rh3AG248200 Rh3BG283200 Rh3CG279800 Rh3DG276100
rosa_wichuraiana Rw0G013140 Rw3G022350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 11, 45
AccIII TCCGGA 1 cut(s) 402
AciI CCGC 3 cut(s) 27, 361, 515
AclWI GGATC 1 cut(s) 175
AcsI RAATTY 2 cut(s) 386, 669
AcyI GRCGYC 2 cut(s) 8, 42
AdeI CACNNNGTG 1 cut(s) 295
AfaI GTAC 2 cut(s) 89, 583
AfiI CCNNNNNNNGG 1 cut(s) 652
AgsI TTSAA 2 cut(s) 56, 312
AluBI AGCT 3 cut(s) 33, 590, 622
AluI AGCT 3 cut(s) 33, 590, 622
Alw26I GTCTC 3 cut(s) 49, 352, 445
AlwI GGATC 1 cut(s) 175
AlwNI CAGNNNCTG 1 cut(s) 590
Aor13HI TCCGGA 1 cut(s) 402
ApeKI GCWGC 2 cut(s) 30, 207
ApoI RAATTY 2 cut(s) 386, 669
AsuHPI GGTGA 2 cut(s) 270, 284
BaeGI GKGCMC 1 cut(s) 113
BauI CACGAG 1 cut(s) 34
BbsI GAAGAC 1 cut(s) 308
BbvI GCAGC 2 cut(s) 42, 219
BccI CCATC 2 cut(s) 212, 515
BcgI CGANNNNNNTGC 2 cut(s) 542, 576
BcoDI GTCTC 3 cut(s) 49, 352, 445
BfmI CTRYAG 1 cut(s) 564
BisI GCNGC 3 cut(s) 28, 31, 208
BlsI GCNGC 3 cut(s) 29, 32, 209
BmrI ACTGGG 1 cut(s) 116
BmsI GCATC 4 cut(s) 118, 202, 449, 559
BmuI ACTGGG 1 cut(s) 116
BpiI GAAGAC 1 cut(s) 308
BpmI CTGGAG 1 cut(s) 671
Bpu10I CCTNAGC 1 cut(s) 334
BsaHI GRCGYC 2 cut(s) 8, 42
BsaWI WCCGGW 1 cut(s) 402
BsaXI ACNNNNNCTCC 4 cut(s) 71, 101, 266, 296
Bsc4I CCNNNNNNNGG 1 cut(s) 652
Bse1I ACTGG 2 cut(s) 111, 654
BseAI TCCGGA 1 cut(s) 402
BseGI GGATG 2 cut(s) 526, 555
BseLI CCNNNNNNNGG 1 cut(s) 652
BseNI ACTGG 2 cut(s) 111, 654
BseRI GAGGAG 2 cut(s) 92, 668
BseSI GKGCMC 1 cut(s) 113
BseXI GCAGC 2 cut(s) 42, 219
BsiSI CCGG 1 cut(s) 403
BslFI GGGAC 2 cut(s) 53, 315
BslI CCNNNNNNNGG 1 cut(s) 652
BsmAI GTCTC 3 cut(s) 49, 352, 445
BsmBI CGTCTC 1 cut(s) 49
BsmFI GGGAC 2 cut(s) 53, 315
Bsp1286I GDGCHC 1 cut(s) 113
Bsp13I TCCGGA 1 cut(s) 402
Bsp143I GATC 2 cut(s) 142, 180
BspACI CCGC 3 cut(s) 27, 361, 515
BspEI TCCGGA 1 cut(s) 402
BspPI GGATC 1 cut(s) 175
BsrI ACTGG 2 cut(s) 111, 654
BssMI GATC 2 cut(s) 142, 180
BssNI GRCGYC 2 cut(s) 8, 42
BssSI CACGAG 1 cut(s) 34
Bst2BI CACGAG 1 cut(s) 34
Bst4CI ACNGT 1 cut(s) 74
Bst6I CTCTTC 1 cut(s) 534
BstACI GRCGYC 2 cut(s) 8, 42
BstC8I GCNNGC 3 cut(s) 205, 340, 414
BstDEI CTNAG 2 cut(s) 292, 334
BstF5I GGATG 2 cut(s) 526, 555
BstKTI GATC 2 cut(s) 145, 183
BstMAI GTCTC 3 cut(s) 49, 352, 445
BstMBI GATC 2 cut(s) 142, 180
BstMWI GCNNNNNNNGC 2 cut(s) 117, 569
BstNSI RCATGY 1 cut(s) 416
BstSFI CTRYAG 1 cut(s) 564
BstSLI GKGCMC 1 cut(s) 113
BstV1I GCAGC 2 cut(s) 42, 219
BstV2I GAAGAC 1 cut(s) 308
BstX2I RGATCY 1 cut(s) 180
BstYI RGATCY 1 cut(s) 180
BtsCI GGATG 2 cut(s) 526, 555
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 1 cut(s) 579
Cac8I GCNNGC 3 cut(s) 205, 340, 414
CaiI CAGNNNCTG 1 cut(s) 590
Csp6I GTAC 2 cut(s) 88, 582
CviAII CATG 3 cut(s) 242, 413, 457
CviJI RGCY 8 cut(s) 33, 203, 210, 481, 505, 590, 622, 645
CviKI_1 RGCY 8 cut(s) 33, 203, 210, 481, 505, 590, 622, 645
CviQI GTAC 2 cut(s) 88, 582
DdeI CTNAG 2 cut(s) 292, 334
DpnI GATC 2 cut(s) 144, 182
DpnII GATC 2 cut(s) 142, 180
DraIII CACNNNGTG 1 cut(s) 295
Eam1104I CTCTTC 1 cut(s) 534
EarI CTCTTC 1 cut(s) 534
EciI GGCGGA 1 cut(s) 350
EcoRI GAATTC 1 cut(s) 386
Esp3I CGTCTC 1 cut(s) 49
FaeI CATG 3 cut(s) 245, 416, 460
FaiI YATR 8 cut(s) 122, 243, 254, 345, 414, 458, 596, 635
FaqI GGGAC 2 cut(s) 53, 315
FatI CATG 3 cut(s) 241, 412, 456
Fnu4HI GCNGC 3 cut(s) 28, 31, 208
FokI GGATG 2 cut(s) 533, 542
Fsp4HI GCNGC 3 cut(s) 28, 31, 208
GluI GCNGC 3 cut(s) 28, 31, 208
GsuI CTGGAG 1 cut(s) 671
HapII CCGG 1 cut(s) 403
Hin1I GRCGYC 2 cut(s) 8, 42
Hin1II CATG 3 cut(s) 245, 416, 460
HindIII AAGCTT 1 cut(s) 620
HinfI GANTC 3 cut(s) 275, 308, 464
HpaII CCGG 1 cut(s) 403
HphI GGTGA 2 cut(s) 270, 284
Hpy166II GTNNAC 1 cut(s) 88
Hpy188I TCNGA 7 cut(s) 13, 142, 198, 352, 375, 385, 445
Hpy188III TCNNGA 1 cut(s) 403
Hpy8I GTNNAC 1 cut(s) 88
Hpy99I CGWCG 1 cut(s) 10
HpyCH4III ACNGT 1 cut(s) 74
HpyCH4IV ACGT 2 cut(s) 8, 42
HpyCH4V TGCA 5 cut(s) 99, 252, 412, 440, 572
HpyF10VI GCNNNNNNNGC 2 cut(s) 117, 569
HpyF3I CTNAG 2 cut(s) 292, 334
HpySE526I ACGT 2 cut(s) 8, 42
Hsp92I GRCGYC 2 cut(s) 8, 42
Hsp92II CATG 3 cut(s) 245, 416, 460
Kpn2I TCCGGA 1 cut(s) 402
Kzo9I GATC 2 cut(s) 142, 180
LmnI GCTCC 1 cut(s) 587
LpnPI CCDG 9 cut(s) 92, 217, 217, 416, 515, 551, 564, 570, 635
Lsp1109I GCAGC 2 cut(s) 42, 219
LweI GCATC 4 cut(s) 118, 202, 449, 559
MaeII ACGT 2 cut(s) 8, 42
MaeIII GTNAC 2 cut(s) 272, 574
MalI GATC 2 cut(s) 144, 182
MboI GATC 2 cut(s) 142, 180
MboII GAAGA 2 cut(s) 308, 521
MfeI CAATTG 1 cut(s) 475
MflI RGATCY 1 cut(s) 180
MhlI GDGCHC 1 cut(s) 113
MluCI AATT 4 cut(s) 50, 386, 475, 669
MlyI GAGTC 1 cut(s) 269
MnlI CCTC 7 cut(s) 70, 263, 292, 501, 506, 511, 646
MroI TCCGGA 1 cut(s) 402
MspI CCGG 1 cut(s) 403
MunI CAATTG 1 cut(s) 475
MwoI GCNNNNNNNGC 2 cut(s) 117, 569
NdeII GATC 2 cut(s) 142, 180
NlaIII CATG 3 cut(s) 245, 416, 460
NmeAIII GCCGAG 1 cut(s) 236
NmuCI GTSAC 2 cut(s) 272, 574
NspI RCATGY 1 cut(s) 416
PaeI GCATGC 1 cut(s) 416
PfeI GAWTC 2 cut(s) 308, 464
PflFI GACNNNGTC 1 cut(s) 7
PkrI GCNGC 3 cut(s) 29, 32, 209
PleI GAGTC 1 cut(s) 269
PpsI GAGTC 1 cut(s) 269
PstNI CAGNNNCTG 1 cut(s) 590
PsuI RGATCY 1 cut(s) 180
PsyI GACNNNGTC 1 cut(s) 7
RsaI GTAC 2 cut(s) 89, 583
RsaNI GTAC 2 cut(s) 88, 582
SatI GCNGC 3 cut(s) 28, 31, 208
Sau3AI GATC 2 cut(s) 142, 180
SchI GAGTC 1 cut(s) 269
SduI GDGCHC 1 cut(s) 113
SfaNI GCATC 4 cut(s) 118, 202, 449, 559
SfcI CTRYAG 1 cut(s) 564
SphI GCATGC 1 cut(s) 416
Sse9I AATT 4 cut(s) 50, 386, 475, 669
SsiI CCGC 3 cut(s) 27, 361, 515
TaaI ACNGT 1 cut(s) 74
TaiI ACGT 2 cut(s) 11, 45
TaqI TCGA 1 cut(s) 552
TasI AATT 4 cut(s) 50, 386, 475, 669
TatI WGTACW 1 cut(s) 87
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 2 cut(s) 308, 464
TscAI CASTG 1 cut(s) 579
TseFI GTSAC 2 cut(s) 272, 574
TseI GCWGC 2 cut(s) 30, 207
Tsp45I GTSAC 2 cut(s) 272, 574
TspDTI ATGAA 3 cut(s) 148, 473, 618
TspGWI ACGGA 2 cut(s) 419, 548
TspRI CASTG 1 cut(s) 579
Tth111I GACNNNGTC 1 cut(s) 7
XapI RAATTY 2 cut(s) 386, 669
XceI RCATGY 1 cut(s) 416
XcmI CCANNNNNNNNNTGG 1 cut(s) 294
ZraI GACGTC 2 cut(s) 9, 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.