Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006414

Physical Location & Seq

Genomic Coordinates Reverse (-)

14361961 .. 14363751

Gene Structure 1791 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G119800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGAGTGGTGTTCTTGGAATTTTCTAGTTTATTTTCTCATCTTCTTGTTACCAGCTCTGCTCTTCTTGCTAATCCGCCGGAGATCAAAATCGGGCAACCATTTGCTTCCTCCTGGACCACCAGGATGGCCTATATTCGGCAACATGTTCGACCTCGGCACGATGCCACACAGGACTCTCACTGAGCTAACGCCCAAGTTTGGTCCTGTAATTTGGCTACGGCTTGGTGCAAGAGCAACTATGTCAGTTCAATCTGCCAAAGCAGCCTCTGAGTTTTTCAAAAACCATGACCTCTCATTTGCAAACCGCACCACAAATGAAGTTTGCCGGGTTTATGACTACCACAAGGGGTCATTGGCTCTAGCCCCTTACGGTTCACACTGGCGGAGGCGGCTCATGACGGTTGACATGGTCGTAAACAAGCGCATCAACGAGACCGCCTTCGTTCGAAGAAAGTGCTTTGACAACTTGCAGTTGTGGATAGAAGAGGAAGCCTCTAAGCTCAAAGAAGGGCATGGAGTTCATGTGGCTCGTTTTGTGTTTCTTATGACTTTCAACCTTCTTGGGAACCTCATGCTGTCTAGGGACTTGGTGGATCCTAAGTCAAACGAAGGGTTGGAGTTCTTTAAGGCAATGAATGGACTGATGGAGTGGAATGGGACTGCAAACATGGCTGATTACTTTCCATGGCTAAGGTGGTTGGATCCACAGGGCTTGAAGAGGAAGATGAAAAAGGACCTTGGAAAAGCTATACAGATTGCCTCTAAGTTTGTGAAGGAGCGCATGGAAGCGAGAGGGATGGGTAGAGAGAAAACTAGGGACTTCTTGGATTTGTTGCTTGAATTTGAAGGCAATGGAATTGATGAACCAGACAAAATTTCTGAACATGATCTCAATATTTTTATACTGGAAATATTTATAGCTGGTTCAGAAACAACAAGCAGCACCACAGAATGGGCAATGACAGAGCTGCTATGCAACCCAGAGACATTGATGAAGGCCAAAGCCGAGCTCCGAGCTCACTCAAGTGATAGAAAGATTGAAGAGAGTGATATTGACAATCTTCCCTATTTGCAGGGTATAATTAAAGAAACACTAAGATTGCATCCACCAATTCCATTTCTACTACCAAGAAAGGCTATGGATGACACCAACTTCATGGGGTATTTTATACCAAAAGACACACAGGTTTTTGTGAATGCTTATGCAATTGGAAGAGACCCAGATGTGTGGGTTGATGAGCCTAATTCATTCAAGCCTGAGAGGTTCATAGGTTCAAAAATTGATTACAAGGGCCAACATTATGAGTTGATTCCATTTGGAGCTGGGAGAAGAATGTGTGCAGGTGTGCCTCTGGCTCATAGAATGTTGCATCTTACATTGGGGATATTGCTTCACCAATTTGATTGGTCCCTTGATGGAAATGTCACCAGAGACACTATGGATTGGAAGGACAGGTTGGGGATATCAATAAGAAAGTCTGTGCCATTACTAGCAGTGCCTAAAAAATGCTTGGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

p450

Protein Analysis

507

Amino Acids

58.26

Weight (kDa)

8.82

Isoelectric Point (pI)

35.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006414)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g17550 FvH4_6g17570
malus_domestica	MD12G1098900.v1.1 MD14G1093700.v1.1
prunus_persica	Prupe.7G119800_v2.0.a1 Prupe.7G120000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr3g0471801
rosa_laevigata	RLG00000024127 RLG00000024129
rosa_multiflora	Rmu_co8279071.1_g000001 Rmu_sc0002323.1_g000003 Rmu_sc0002323.1_g000014 Rmu_sc0042741.1_g000001
rosa_roxburghii	Rroxscaffold_6G00409520 Rroxscaffold_6G00409540
rosa_rugosa	Rorug03G0120000 Rorug03G0120300 Rorug03G0120500
rosa_samantha	Rh3AG171200 Rh3BG196900 Rh3CG187700 Rh3DG177600 Rh3DG177700 Rh3DG177900
rosa_wichuraiana	Rw3G016880 Rw3G016900 Rw3G016910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1334
Acc36I	ACCTGC	1 cut(s)	1334
AccB7I	CCANNNNNTGG	1 cut(s)	954
AciI	CCGC	5 cut(s)	76, 307, 385, 391, 438
AclWI	GGATC	4 cut(s)	590, 603, 698, 711
AcsI	RAATTY	3 cut(s)	19, 842, 876
AfiI	CCNNNNNNNGG	3 cut(s)	137, 200, 954
AflIII	ACRYGT	1 cut(s)	144
AgsI	TTSAA	9 cut(s)	251, 280, 556, 718, 842, 848, 1043, 1255, 1278
AjnI	CCWGG	2 cut(s)	112, 121
AjuI	GAANNNNNNNTTGG	2 cut(s)	1442, 1474
AleI	CACNNNNGTG	1 cut(s)	1026
AluBI	AGCT	9 cut(s)	56, 187, 502, 749, 923, 970, 1012, 1019, 1325
AluI	AGCT	9 cut(s)	56, 187, 502, 749, 923, 970, 1012, 1019, 1325
Alw21I	GWGCWC	2 cut(s)	1014, 1021
Alw26I	GTCTC	4 cut(s)	428, 980, 1212, 1428
AlwI	GGATC	4 cut(s)	590, 603, 698, 711
AlwNI	CAGNNNCTG	1 cut(s)	269
AoxI	GGCC	3 cut(s)	128, 999, 1294
ApeKI	GCWGC	3 cut(s)	263, 942, 970
ApoI	RAATTY	3 cut(s)	19, 842, 876
ArsI	GACNNNNNNTTYG	2 cut(s)	281, 313
AspLEI	GCGC	2 cut(s)	426, 783
AspS9I	GGNCC	5 cut(s)	116, 203, 736, 1294, 1410
AsuC2I	CCSGG	1 cut(s)	329
AsuHPI	GGTGA	2 cut(s)	1388, 1420
AsuII	TTCGAA	1 cut(s)	448
AvaII	GGWCC	4 cut(s)	116, 203, 736, 1410
BamHI	GGATCC	2 cut(s)	595, 703
BanII	GRGCYC	2 cut(s)	1014, 1021
Bbv12I	GWGCWC	2 cut(s)	1014, 1021
BbvI	GCAGC	3 cut(s)	275, 954, 957
BccI	CCATC	4 cut(s)	120, 640, 793, 1412
BceAI	ACGGC	1 cut(s)	236
BcgI	CGANNNNNNTGC	4 cut(s)	130, 164, 438, 472
BciT130I	CCWGG	2 cut(s)	114, 123
BcnI	CCSGG	1 cut(s)	329
BcoDI	GTCTC	4 cut(s)	428, 980, 1212, 1428
BfaI	CTAG	5 cut(s)	26, 362, 582, 816, 1493
BfuAI	ACCTGC	1 cut(s)	1334
BisI	GCNGC	4 cut(s)	264, 392, 943, 971
BlsI	GCNGC	4 cut(s)	265, 393, 944, 972
Bme1390I	CCNGG	3 cut(s)	114, 123, 329
Bme18I	GGWCC	4 cut(s)	116, 203, 736, 1410
BmgT120I	GGNCC	5 cut(s)	116, 203, 736, 1294, 1410
BmiI	GGNNCC	4 cut(s)	569, 597, 705, 1412
BmrFI	CCNGG	3 cut(s)	114, 123, 329
BmsI	GCATC	4 cut(s)	153, 435, 1114, 1381
BplI	GAGNNNNNCTC	2 cut(s)	479, 511
Bpu10I	CCTNAGC	1 cut(s)	692
Bpu14I	TTCGAA	1 cut(s)	448
BpuEI	CTTGAG	1 cut(s)	1009
BpuMI	CCSGG	1 cut(s)	329
BsaBI	GATNNNNATC	1 cut(s)	88
BsaI	GGTCTC	2 cut(s)	428, 1212
BsaJI	CCNNGG	3 cut(s)	154, 686, 739
BsaXI	ACNNNNNCTCC	2 cut(s)	510, 540
Bsc4I	CCNNNNNNNGG	3 cut(s)	137, 200, 954
Bse1I	ACTGG	2 cut(s)	386, 912
Bse3DI	GCAATG	3 cut(s)	639, 859, 966
Bse8I	GATNNNNATC	1 cut(s)	88
BseBI	CCWGG	2 cut(s)	114, 123
BseDI	CCNNGG	3 cut(s)	154, 686, 739
BseGI	GGATG	4 cut(s)	131, 804, 1105, 1150
BseJI	GATNNNNATC	1 cut(s)	88
BseLI	CCNNNNNNNGG	3 cut(s)	137, 200, 954
BseMI	GCAATG	3 cut(s)	639, 859, 966
BseMII	CTCAG	3 cut(s)	174, 261, 1251
BseNI	ACTGG	2 cut(s)	386, 912
BseXI	GCAGC	3 cut(s)	275, 954, 957
BseYI	CCCAGC	1 cut(s)	1325
BsgI	GTGCAG	1 cut(s)	1362
BshFI	GGCC	3 cut(s)	130, 1001, 1296
BsiHKAI	GWGCWC	2 cut(s)	1014, 1021
BsiSI	CCGG	2 cut(s)	79, 328
BslFI	GGGAC	4 cut(s)	599, 673, 833, 1396
BslI	CCNNNNNNNGG	3 cut(s)	137, 200, 954
BsmAI	GTCTC	4 cut(s)	428, 980, 1212, 1428
BsmFI	GGGAC	4 cut(s)	599, 673, 833, 1396
BsmI	GAATGC	1 cut(s)	1204
BsnI	GGCC	3 cut(s)	130, 1001, 1296
Bso31I	GGTCTC	2 cut(s)	428, 1212
Bsp119I	TTCGAA	1 cut(s)	448
Bsp1286I	GDGCHC	2 cut(s)	1014, 1021
Bsp143I	GATC	4 cut(s)	83, 595, 703, 889
Bsp19I	CCATGG	1 cut(s)	686
BspACI	CCGC	5 cut(s)	76, 307, 385, 391, 438
BspANI	GGCC	3 cut(s)	130, 1001, 1296
BspCNI	CTCAG	3 cut(s)	175, 262, 1252
BspHI	TCATGA	1 cut(s)	396
BspLI	GGNNCC	4 cut(s)	569, 597, 705, 1412
BspMI	ACCTGC	1 cut(s)	1334
BspPI	GGATC	4 cut(s)	590, 603, 698, 711
BspQI	GCTCTTC	1 cut(s)	68
BspT104I	TTCGAA	1 cut(s)	448
BspTNI	GGTCTC	2 cut(s)	428, 1212
BsrDI	GCAATG	3 cut(s)	639, 859, 966
BsrI	ACTGG	2 cut(s)	386, 912
BssECI	CCNNGG	3 cut(s)	154, 686, 739
BssMI	GATC	4 cut(s)	83, 595, 703, 889
BssT1I	CCWWGG	2 cut(s)	686, 739
Bst2UI	CCWGG	2 cut(s)	114, 123
Bst4CI	ACNGT	2 cut(s)	374, 403
Bst6I	CTCTTC	5 cut(s)	68, 480, 713, 1038, 1210
BstBI	TTCGAA	1 cut(s)	448
BstDEI	CTNAG	8 cut(s)	183, 270, 498, 600, 692, 765, 1097, 1260
BstDSI	CCRYGG	1 cut(s)	686
BstF5I	GGATG	4 cut(s)	131, 804, 1105, 1150
BstHHI	GCGC	2 cut(s)	426, 783
BstKTI	GATC	4 cut(s)	86, 598, 706, 892
BstMAI	GTCTC	4 cut(s)	428, 980, 1212, 1428
BstMBI	GATC	4 cut(s)	83, 595, 703, 889
BstMWI	GCNNNNNNNGC	4 cut(s)	67, 263, 391, 671
BstNI	CCWGG	2 cut(s)	114, 123
BstNSI	RCATGY	1 cut(s)	148
BstSCI	CCNGG	3 cut(s)	112, 121, 327
BstV1I	GCAGC	3 cut(s)	275, 954, 957
BstX2I	RGATCY	2 cut(s)	595, 703
BstXI	CCANNNNNNTGG	3 cut(s)	126, 1159, 1230
BstYI	RGATCY	2 cut(s)	595, 703
BsuRI	GGCC	3 cut(s)	130, 1001, 1296
BtgI	CCRYGG	1 cut(s)	686
BtsCI	GGATG	4 cut(s)	131, 804, 1105, 1150
BtsI	GCAGTG	1 cut(s)	1503
BtsIMutI	CAGTG	3 cut(s)	180, 379, 1503
BveI	ACCTGC	1 cut(s)	1334
CaiI	CAGNNNCTG	1 cut(s)	269
CciI	TCATGA	1 cut(s)	396
CfoI	GCGC	2 cut(s)	426, 783
Cfr13I	GGNCC	5 cut(s)	116, 203, 736, 1294, 1410
CspCI	CAANNNNNGTGG	2 cut(s)	696, 731
DdeI	CTNAG	8 cut(s)	183, 270, 498, 600, 692, 765, 1097, 1260
DpnI	GATC	4 cut(s)	85, 597, 705, 891
DpnII	GATC	4 cut(s)	83, 595, 703, 889
Eam1104I	CTCTTC	5 cut(s)	68, 480, 713, 1038, 1210
EarI	CTCTTC	5 cut(s)	68, 480, 713, 1038, 1210
EciI	GGCGGA	2 cut(s)	65, 400
Ecl136II	GAGCTC	2 cut(s)	1012, 1019
Eco130I	CCWWGG	2 cut(s)	686, 739
Eco24I	GRGCYC	2 cut(s)	1014, 1021
Eco31I	GGTCTC	2 cut(s)	428, 1212
Eco32I	GATATC	1 cut(s)	1467
Eco47I	GGWCC	4 cut(s)	116, 203, 736, 1410
Eco53kI	GAGCTC	2 cut(s)	1012, 1019
EcoICRI	GAGCTC	2 cut(s)	1012, 1019
EcoO109I	RGGNCCY	1 cut(s)	736
EcoRII	CCWGG	2 cut(s)	112, 121
EcoRV	GATATC	1 cut(s)	1467
EcoT14I	CCWWGG	2 cut(s)	686, 739
EcoT38I	GRGCYC	2 cut(s)	1014, 1021
ErhI	CCWWGG	2 cut(s)	686, 739
FaqI	GGGAC	4 cut(s)	599, 673, 833, 1396
Fnu4HI	GCNGC	4 cut(s)	264, 392, 943, 971
FokI	GGATG	4 cut(s)	138, 811, 1092, 1157
FriOI	GRGCYC	2 cut(s)	1014, 1021
Fsp4HI	GCNGC	4 cut(s)	264, 392, 943, 971
FspBI	CTAG	5 cut(s)	26, 362, 582, 816, 1493
GlaI	GCGC	2 cut(s)	425, 782
GluI	GCNGC	4 cut(s)	264, 392, 943, 971
GsaI	CCCAGC	1 cut(s)	1329
HaeIII	GGCC	3 cut(s)	130, 1001, 1296
HapII	CCGG	2 cut(s)	79, 328
HhaI	GCGC	2 cut(s)	426, 783
Hin6I	GCGC	2 cut(s)	424, 781
HinP1I	GCGC	2 cut(s)	424, 781
HincII	GTYRAC	1 cut(s)	406
HindII	GTYRAC	1 cut(s)	406
HinfI	GANTC	2 cut(s)	175, 1312
HpaII	CCGG	2 cut(s)	79, 328
HphI	GGTGA	2 cut(s)	1388, 1420
Hpy166II	GTNNAC	3 cut(s)	377, 406, 418
Hpy188I	TCNGA	4 cut(s)	271, 883, 931, 1016
Hpy188III	TCNNGA	1 cut(s)	397
Hpy8I	GTNNAC	3 cut(s)	377, 406, 418
HpyAV	CCTTC	8 cut(s)	451, 503, 569, 605, 769, 842, 991, 1444
HpyCH4III	ACNGT	2 cut(s)	374, 403
HpyF10VI	GCNNNNNNNGC	4 cut(s)	67, 263, 391, 671
HpyF3I	CTNAG	8 cut(s)	183, 270, 498, 600, 692, 765, 1097, 1260
HspAI	GCGC	2 cut(s)	424, 781
Kzo9I	GATC	4 cut(s)	83, 595, 703, 889
LguI	GCTCTTC	1 cut(s)	68
LmnI	GCTCC	3 cut(s)	778, 1017, 1322
Lsp1109I	GCAGC	3 cut(s)	275, 954, 957
LweI	GCATC	4 cut(s)	153, 435, 1114, 1381
MaeI	CTAG	5 cut(s)	26, 362, 582, 816, 1493
MaeIII	GTNAC	2 cut(s)	48, 1426
MalI	GATC	4 cut(s)	85, 597, 705, 891
MboI	GATC	4 cut(s)	83, 595, 703, 889
MfeI	CAATTG	1 cut(s)	1209
MflI	RGATCY	2 cut(s)	595, 703
MhlI	GDGCHC	2 cut(s)	1014, 1021
MlyI	GAGTC	1 cut(s)	169
MmeI	TCCRAC	2 cut(s)	597, 681
MseI	TTAA	2 cut(s)	627, 1086
MslI	CAYNNNNRTG	2 cut(s)	124, 1026
MspI	CCGG	2 cut(s)	79, 328
MspR9I	CCNGG	3 cut(s)	114, 123, 329
MunI	CAATTG	1 cut(s)	1209
Mva1269I	GAATGC	1 cut(s)	1204
MvaI	CCWGG	2 cut(s)	114, 123
MwoI	GCNNNNNNNGC	4 cut(s)	67, 263, 391, 671
NciI	CCSGG	1 cut(s)	329
NcoI	CCATGG	1 cut(s)	686
NdeII	GATC	4 cut(s)	83, 595, 703, 889
NlaIV	GGNNCC	4 cut(s)	569, 597, 705, 1412
NmeAIII	GCCGAG	2 cut(s)	135, 1033
NmuCI	GTSAC	1 cut(s)	1426
NspI	RCATGY	1 cut(s)	148
NspV	TTCGAA	1 cut(s)	448
OliI	CACNNNNGTG	1 cut(s)	1026
PagI	TCATGA	1 cut(s)	396
PaqCI	CACCTGC	1 cut(s)	1334
PciI	ACATGT	1 cut(s)	144
PciSI	GCTCTTC	1 cut(s)	68
PctI	GAATGC	1 cut(s)	1204
PfeI	GAWTC	1 cut(s)	1312
PflFI	GACNNNGTC	1 cut(s)	410
PflMI	CCANNNNNTGG	1 cut(s)	954
PfoI	TCCNGGA	1 cut(s)	112
PkrI	GCNGC	4 cut(s)	265, 393, 944, 972
PleI	GAGTC	1 cut(s)	169
PpsI	GAGTC	1 cut(s)	169
PpuMI	RGGWCCY	1 cut(s)	736
PscI	ACATGT	1 cut(s)	144
Psp124BI	GAGCTC	2 cut(s)	1014, 1021
Psp5II	RGGWCCY	1 cut(s)	736
Psp6I	CCWGG	2 cut(s)	112, 121
PspFI	CCCAGC	1 cut(s)	1325
PspGI	CCWGG	2 cut(s)	112, 121
PspN4I	GGNNCC	4 cut(s)	569, 597, 705, 1412
PspPI	GGNCC	5 cut(s)	116, 203, 736, 1294, 1410
PspPPI	RGGWCCY	1 cut(s)	736
PstNI	CAGNNNCTG	1 cut(s)	269
PsuI	RGATCY	2 cut(s)	595, 703
PsyI	GACNNNGTC	1 cut(s)	410
RseI	CAYNNNNRTG	2 cut(s)	124, 1026
SacI	GAGCTC	2 cut(s)	1014, 1021
SapI	GCTCTTC	1 cut(s)	68
SaqAI	TTAA	2 cut(s)	627, 1086
SatI	GCNGC	4 cut(s)	264, 392, 943, 971
Sau3AI	GATC	4 cut(s)	83, 595, 703, 889
Sau96I	GGNCC	5 cut(s)	116, 203, 736, 1294, 1410
SchI	GAGTC	1 cut(s)	169
ScrFI	CCNGG	3 cut(s)	114, 123, 329
SduI	GDGCHC	2 cut(s)	1014, 1021
SfaNI	GCATC	4 cut(s)	153, 435, 1114, 1381
SfuI	TTCGAA	1 cut(s)	448
SinI	GGWCC	4 cut(s)	116, 203, 736, 1410
SmiMI	CAYNNNNRTG	2 cut(s)	124, 1026
SmlI	CTYRAG	1 cut(s)	1024
SmoI	CTYRAG	1 cut(s)	1024
SsiI	CCGC	5 cut(s)	76, 307, 385, 391, 438
SspI	AATATT	2 cut(s)	898, 915
SspMI	CTAG	5 cut(s)	26, 362, 582, 816, 1493
SstI	GAGCTC	2 cut(s)	1014, 1021
StyD4I	CCNGG	3 cut(s)	112, 121, 327
StyI	CCWWGG	2 cut(s)	686, 739
TaaI	ACNGT	2 cut(s)	374, 403
TaqI	TCGA	2 cut(s)	150, 448
TauI	GCSGC	1 cut(s)	394
TfiI	GAWTC	1 cut(s)	1312
Tru1I	TTAA	2 cut(s)	627, 1086
Tru9I	TTAA	2 cut(s)	627, 1086
TscAI	CASTG	3 cut(s)	187, 386, 1503
TseFI	GTSAC	1 cut(s)	1426
TseI	GCWGC	3 cut(s)	263, 942, 970
Tsp45I	GTSAC	1 cut(s)	1426
TspDTI	ATGAA	9 cut(s)	333, 512, 650, 743, 879, 1010, 1147, 1239, 1258
TspRI	CASTG	3 cut(s)	187, 386, 1503
Tth111I	GACNNNGTC	1 cut(s)	410
Van91I	CCANNNNNTGG	1 cut(s)	954
VpaK11BI	GGWCC	4 cut(s)	116, 203, 736, 1410
XapI	RAATTY	3 cut(s)	19, 842, 876
XceI	RCATGY	1 cut(s)	148
XcmI	CCANNNNNNNNNTGG	2 cut(s)	693, 1438
XspI	CTAG	5 cut(s)	26, 362, 582, 816, 1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.