Rorug03G0120000

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0006414
Physical Location & Seq
Reverse (-)
9670803 .. 9673422
2620 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0120000.1

Sequence Viewer

Length: 2253 bp
ATGGGTCGTCTTCTACGGCTGCAACTGCTTCATCTGTCTCTCAATTCCTTCAGTGGGAAATTTCCATCTAATATATCTCACTGCACACAACTAAGAGTGCTCAATGTTATTTCCAATGAGCTTACTGGGTCGATCCCGGATCAACTTGGTTCATTATTGAAGTTAACTCATCTATGGCTTCAGGGTAACCATCTTCCTGGAAAAATCCCAGAGTGGATAGGAAACTTTTCATCTTTGTATAGTATAGCTCTTGGCGACAATAATTTACAGGGAAGGATACCCAATCAGCTCGGGCGCCTAACAAGCCTGGGAAACTTCCTAGTTTCGAGCAATAATCTGTCTGGTATGGTCCATTCTTCAATTTATAATATTTCTTCCATACACATTTTCAGTGTTACTGACAACCAGCTGCGTGGAGAGCTGCCGCAAAACGCTGGCATTACTCTTCCTAATTTGGAGGTATTTGCCGGCGGTGTCAACAAATTCACAGGAACTATTCCAGCATCATTGTCAAATGCTTCTAGACTTCGGCTTCTTGATTTTGCTGAAAATGGTCTCACTGGTAAACTCCCTGCTGAAAGTCTTGGAAGGTTGAAATGGTTAAGTAGAGTGAACTTTGATGACAATTCACTGGAAAGTGGGAAAGCTGGTGACCTTACTTCTCTCAGTTTCCTTGCTAACTGTACTAATCTTGAGGTGTTGAGTTTTAGCCGTATTCATCTTGGAGGTGAATTGCCAGAATCCATAGCCAACCTATCAACCAAACTGAGGATATTTACAATGGGAGGAAATCTGATATATGGACCCCTCCCTACTAGCATTGGAAATCTGGTAAACTTGACAAATCTTGGAATGGAACAAAACCACATTGGTGGTAGTCTCCCTGATGTGATCGGGAAGCTTTACACGTTAGAGGGACTGTATTTGAATCTGAACATATTTTCAGGGCCAATCCCATACTCCATGGGGAACTTGACTTTGGTGACAAGGCTCTTCATGGAGGGAAATAGGTTTGAGGGAAGCATACCTCCAAGTCTCGGAAACTGCCAAAATCTTTTGATACTCACCCTTTCTAGTAACAAGTTAGATGGTACCATACCTAAAGAGGAAACAAGTAATCATGTGAGATCCCCATTACCCTTGGCAGTTGTACTAGCTTGGTTAGCCTGCATTTGGAAGATTCCAGAATTTTTAGGCAAGCTTGGAGCTCTCAGGTATTTCAATCTTTCTCAAAATGAGTTTGAAGGTGAATTGCCTAAAGAAGGAATCTTTCTAATCGTAAGTGGAGTCTCAGTTCTTGGAAATGATAAGCTCTGTGGTGGCATCCCAGAATTACTTCTACCTCCATGTTCCAGCAGAAAGCCTCATTCATCTCGAGGACTACTTGCCCCAAAAGTAATAATCCCTTTAACTAGTGCAATTGCATTAATAATTGCTCTTTCCTGCTTGCTTGCTGCGGTTTCAATGATGAAAAAGCCGAGAGATGGACCTTTGACTTCATCTTCTCATAATGATTCATATCCAAGTATCTCTTACTTGGAACTTGTTCAGTCAACTAATGGGTTTTCTGTGGACAATCTGATTGGTTCGGGAAGTTTTGGTTCTGTATACAAAGGATTACTGAGTAGTAATGGAATGGTAGTTGCTGTTAAGGTATTAAACCTTCAACAACACGGAGCTTCAAAGAGTTTCATTGATGAATGCAGAGCTCTAAGAAGTATAAGGTACCGCAATCTTCTCAAGATCATAACTACCTGCTCAAGCACTGAAAATCAGGGTAACGACTTCAAAAGTCTAGTTTTCAATTTCATGGAAAATGGAAGTCTAGATCCTTGGCTGCACCCTAGAGAAAATGATAGATCTCAAAGTAAGAGATTGAGCCTTATCCAAAGGCTCAATATTGCCATTGATGTTGCTTGCGCATTAGATTATCTACATGACCATTGTGCAACATCTATTGTTCATTGTGATCTAAAGCCAAGCAACGTCCTTCTCGATGAGGATATGGTAGCCCATGTTGGTGACTTCGGTTTAGCAAGCTTCCTCTTCGAAGCATCGGATAATCATTCCAAAAGTCAGACCATGTCAGCTGGGCTAAAGGGTTCCATAGGCTACATTCCTCCAGAATATGGCATGGGATGTCAAGTTTCCATTCTGGGAGATATCTATAGCTATGGGATTCTATTGCTAGAAATGTTCACAGGGAAAAGGCCAACGGACGAAATGTTCAAAGATGGTCTAAGCATTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

750

Amino Acids

81.41

Weight (kDa)

6.83

Isoelectric Point (pI)

30.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 2 - 183 7.2e-08 Leucine-rich repeat region
LRR_14 PF23598 217 - 408 2e-07 Leucine-rich repeat region
Pkinase PF00069 523 - 740 3e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 524 - 742 4.7e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 366
Acc16I TGCGCA 1 cut(s) 1921
Acc36I ACCTGC 1 cut(s) 1763
Acc65I GGTACC 2 cut(s) 1091, 1725
AccB1I GGYRCC 3 cut(s) 294, 1091, 1725
AccB7I CCANNNNNTGG 1 cut(s) 2129
AccI GTMKAC 1 cut(s) 1608
AciI CCGC 4 cut(s) 425, 471, 1457, 1729
AclWI GGATC 4 cut(s) 127, 147, 1122, 1823
AcsI RAATTY 3 cut(s) 59, 482, 1187
AcuI CTGAAG 2 cut(s) 34, 164
AcyI GRCGYC 1 cut(s) 295
AfaI GTAC 4 cut(s) 685, 1093, 1152, 1727
AfiI CCNNNNNNNGG 7 cut(s) 54, 768, 1037, 1173, 1262, 1484, 2129
AflIII ACRYGT 1 cut(s) 906
AhlI ACTAGT 1 cut(s) 1412
AjnI CCWGG 2 cut(s) 196, 306
AjuI GAANNNNNNNTTGG 2 cut(s) 962, 994
AleI CACNNNNGTG 1 cut(s) 870
AloI GAACNNNNNNTCC 4 cut(s) 1278, 1310, 2210, 2242
Alw21I GWGCWC 3 cut(s) 102, 1210, 1711
Alw26I GTCTC 5 cut(s) 42, 560, 884, 1040, 1294
AlwI GGATC 4 cut(s) 127, 147, 1122, 1823
Ama87I CYCGRG 2 cut(s) 290, 1374
AoxI GGCC 2 cut(s) 947, 2210
ApeKI GCWGC 5 cut(s) 19, 409, 421, 1454, 1837
ApoI RAATTY 3 cut(s) 59, 482, 1187
AseI ATTAAT 1 cut(s) 1427
Asp700I GAANNNNTTC 3 cut(s) 226, 1335, 1545
Asp718I GGTACC 2 cut(s) 1091, 1725
AspLEI GCGC 2 cut(s) 297, 1922
AspS9I GGNCC 4 cut(s) 349, 803, 947, 1487
AsuC2I CCSGG 1 cut(s) 137
AsuHPI GGTGA 6 cut(s) 662, 740, 994, 1057, 1259, 2033
AsuII TTCGAA 1 cut(s) 2049
AvaI CYCGRG 2 cut(s) 290, 1374
AvaII GGWCC 3 cut(s) 349, 803, 1487
BanI GGYRCC 3 cut(s) 294, 1091, 1725
BanII GRGCYC 2 cut(s) 1210, 1711
BarI GAAGNNNNNNTAC 2 cut(s) 1647, 1679
BbsI GAAGAC 1 cut(s) 2
Bbv12I GWGCWC 3 cut(s) 102, 1210, 1711
BbvI GCAGC 5 cut(s) 6, 396, 408, 1441, 1824
BccI CCATC 5 cut(s) 73, 198, 1082, 1478, 2228
BceAI ACGGC 2 cut(s) 32, 696
BciT130I CCWGG 2 cut(s) 198, 308
BciVI GTATCC 1 cut(s) 270
BcnI CCSGG 1 cut(s) 137
BcoDI GTCTC 5 cut(s) 42, 560, 884, 1040, 1294
BcuI ACTAGT 1 cut(s) 1412
BfmI CTRYAG 1 cut(s) 2167
BfoI RGCGCY 1 cut(s) 298
BfuAI ACCTGC 1 cut(s) 1763
BfuI GTATCC 1 cut(s) 270
BglII AGATCT 1 cut(s) 1859
BisI GCNGC 6 cut(s) 20, 410, 422, 425, 1455, 1838
BlsI GCNGC 6 cut(s) 21, 411, 423, 426, 1456, 1839
Bme1390I CCNGG 3 cut(s) 137, 198, 308
Bme18I GGWCC 3 cut(s) 349, 803, 1487
BmeT110I CYCGRG 2 cut(s) 290, 1374
BmgT120I GGNCC 4 cut(s) 349, 803, 947, 1487
BmiI GGNNCC 5 cut(s) 296, 805, 1093, 1727, 2104
BmrFI CCNGG 3 cut(s) 137, 198, 308
BmrI ACTGGG 1 cut(s) 135
BmsI GCATC 3 cut(s) 512, 1332, 2063
BmuI ACTGGG 1 cut(s) 135
BpiI GAAGAC 1 cut(s) 2
BpmI CTGGAG 1 cut(s) 2106
Bpu14I TTCGAA 1 cut(s) 2049
BpuEI CTTGAG 3 cut(s) 713, 1724, 1744
BpuMI CCSGG 1 cut(s) 137
BsaBI GATNNNNATC 1 cut(s) 1518
BsaHI GRCGYC 1 cut(s) 295
BsaI GGTCTC 1 cut(s) 560
BsaJI CCNNGG 4 cut(s) 307, 963, 1140, 1832
BsaXI ACNNNNNCTCC 2 cut(s) 1278, 1308
Bsc4I CCNNNNNNNGG 7 cut(s) 54, 768, 1037, 1173, 1262, 1484, 2129
Bse118I RCCGGY 1 cut(s) 467
Bse1I ACTGG 3 cut(s) 130, 565, 636
Bse8I GATNNNNATC 1 cut(s) 1518
BseBI CCWGG 2 cut(s) 198, 308
BseDI CCNNGG 4 cut(s) 307, 963, 1140, 1832
BseGI GGATG 2 cut(s) 1323, 2144
BseJI GATNNNNATC 1 cut(s) 1518
BseLI CCNNNNNNNGG 7 cut(s) 54, 768, 1037, 1173, 1262, 1484, 2129
BseMII CTCAG 5 cut(s) 679, 758, 1225, 1305, 1613
BseNI ACTGG 3 cut(s) 130, 565, 636
BseXI GCAGC 5 cut(s) 6, 396, 408, 1441, 1824
BseYI CCCAGC 1 cut(s) 2090
BsgI GTGCAG 2 cut(s) 67, 1823
BshFI GGCC 2 cut(s) 949, 2212
BshNI GGYRCC 3 cut(s) 294, 1091, 1725
BsiHKAI GWGCWC 3 cut(s) 102, 1210, 1711
BsiHKCI CYCGRG 2 cut(s) 290, 1374
BsiSI CCGG 2 cut(s) 137, 468
BslFI GGGAC 1 cut(s) 930
BslI CCNNNNNNNGG 7 cut(s) 54, 768, 1037, 1173, 1262, 1484, 2129
BsmAI GTCTC 5 cut(s) 42, 560, 884, 1040, 1294
BsmFI GGGAC 1 cut(s) 930
BsmI GAATGC 2 cut(s) 1706, 2244
BsnI GGCC 2 cut(s) 949, 2212
Bso31I GGTCTC 1 cut(s) 560
BsoBI CYCGRG 2 cut(s) 290, 1374
Bsp119I TTCGAA 1 cut(s) 2049
Bsp1286I GDGCHC 3 cut(s) 102, 1210, 1711
Bsp143I GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
Bsp19I CCATGG 1 cut(s) 963
BspACI CCGC 4 cut(s) 425, 471, 1457, 1729
BspANI GGCC 2 cut(s) 949, 2212
BspCNI CTCAG 5 cut(s) 678, 759, 1224, 1304, 1614
BspLI GGNNCC 5 cut(s) 296, 805, 1093, 1727, 2104
BspMI ACCTGC 1 cut(s) 1763
BspPI GGATC 4 cut(s) 127, 147, 1122, 1823
BspQI GCTCTTC 1 cut(s) 998
BspT104I TTCGAA 1 cut(s) 2049
BspT107I GGYRCC 3 cut(s) 294, 1091, 1725
BspTNI GGTCTC 1 cut(s) 560
BsrFI RCCGGY 1 cut(s) 467
BsrI ACTGG 3 cut(s) 130, 565, 636
BssAI RCCGGY 1 cut(s) 467
BssECI CCNNGG 4 cut(s) 307, 963, 1140, 1832
BssMI GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
BssNAI GTATAC 1 cut(s) 1609
BssNI GRCGYC 1 cut(s) 295
BssT1I CCWWGG 3 cut(s) 963, 1140, 1832
Bst1107I GTATAC 1 cut(s) 1609
Bst2UI CCWGG 2 cut(s) 198, 308
Bst4CI ACNGT 2 cut(s) 683, 921
Bst6I CTCTTC 3 cut(s) 450, 998, 2051
BstACI GRCGYC 1 cut(s) 295
BstBI TTCGAA 1 cut(s) 2049
BstC8I GCNNGC 8 cut(s) 436, 469, 1168, 1199, 1448, 1452, 1918, 2038
BstDEI CTNAG 8 cut(s) 92, 665, 767, 1211, 1291, 1622, 1712, 2240
BstDSI CCRYGG 1 cut(s) 963
BstEII GGTNACC 2 cut(s) 185, 650
BstENI CCTNNNNNAGG 1 cut(s) 1260
BstF5I GGATG 2 cut(s) 1323, 2144
BstH2I RGCGCY 1 cut(s) 298
BstHHI GCGC 2 cut(s) 297, 1922
BstKTI GATC 8 cut(s) 135, 142, 894, 1130, 1746, 1831, 1862, 1972
BstMAI GTCTC 5 cut(s) 42, 560, 884, 1040, 1294
BstMBI GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
BstMWI GCNNNNNNNGC 4 cut(s) 25, 303, 418, 1163
BstNI CCWGG 2 cut(s) 198, 308
BstPI GGTNACC 2 cut(s) 185, 650
BstSCI CCNGG 3 cut(s) 135, 196, 306
BstSFI CTRYAG 1 cut(s) 2167
BstV1I GCAGC 5 cut(s) 6, 396, 408, 1441, 1824
BstV2I GAAGAC 1 cut(s) 2
BstX2I RGATCY 3 cut(s) 1127, 1828, 1859
BstXI CCANNNNNNTGG 3 cut(s) 197, 413, 872
BstYI RGATCY 3 cut(s) 1127, 1828, 1859
BstZ17I GTATAC 1 cut(s) 1609
BsuI GTATCC 1 cut(s) 270
BsuRI GGCC 2 cut(s) 949, 2212
BtgI CCRYGG 1 cut(s) 963
BtsCI GGATG 2 cut(s) 1323, 2144
BtsI GCAGTG 1 cut(s) 79
BtsIMutI CAGTG 6 cut(s) 58, 79, 397, 558, 629, 1764
BveI ACCTGC 1 cut(s) 1763
Cac8I GCNNGC 8 cut(s) 436, 469, 1168, 1199, 1448, 1452, 1918, 2038
CfoI GCGC 2 cut(s) 297, 1922
Cfr10I RCCGGY 1 cut(s) 467
Cfr13I GGNCC 4 cut(s) 349, 803, 947, 1487
Csp6I GTAC 4 cut(s) 684, 1092, 1151, 1726
CviAII CATG 9 cut(s) 964, 997, 1121, 1347, 1810, 1937, 2015, 2083, 2134
CviQI GTAC 4 cut(s) 684, 1092, 1151, 1726
DdeI CTNAG 8 cut(s) 92, 665, 767, 1211, 1291, 1622, 1712, 2240
DinI GGCGCC 1 cut(s) 296
DpnI GATC 8 cut(s) 134, 141, 893, 1129, 1745, 1830, 1861, 1971
DpnII GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
Eam1104I CTCTTC 3 cut(s) 450, 998, 2051
EarI CTCTTC 3 cut(s) 450, 998, 2051
Ecl136II GAGCTC 2 cut(s) 1208, 1709
Eco130I CCWWGG 3 cut(s) 963, 1140, 1832
Eco24I GRGCYC 2 cut(s) 1210, 1711
Eco31I GGTCTC 1 cut(s) 560
Eco32I GATATC 1 cut(s) 2164
Eco47I GGWCC 3 cut(s) 349, 803, 1487
Eco53kI GAGCTC 2 cut(s) 1208, 1709
Eco57I CTGAAG 2 cut(s) 34, 164
Eco88I CYCGRG 2 cut(s) 290, 1374
Eco91I GGTNACC 2 cut(s) 185, 650
EcoICRI GAGCTC 2 cut(s) 1208, 1709
EcoNI CCTNNNNNAGG 1 cut(s) 1260
EcoO65I GGTNACC 2 cut(s) 185, 650
EcoRII CCWGG 2 cut(s) 196, 306
EcoRV GATATC 1 cut(s) 2164
EcoT14I CCWWGG 3 cut(s) 963, 1140, 1832
EcoT38I GRGCYC 2 cut(s) 1210, 1711
EgeI GGCGCC 1 cut(s) 296
EheI GGCGCC 1 cut(s) 296
ErhI CCWWGG 3 cut(s) 963, 1140, 1832
FaeI CATG 9 cut(s) 967, 1000, 1124, 1350, 1813, 1940, 2018, 2086, 2137
FalI AAGNNNNNCTT 2 cut(s) 1516, 1548
FaqI GGGAC 1 cut(s) 930
FatI CATG 9 cut(s) 963, 996, 1120, 1346, 1809, 1936, 2014, 2082, 2133
FblI GTMKAC 1 cut(s) 1608
Fnu4HI GCNGC 6 cut(s) 20, 410, 422, 425, 1455, 1838
FokI GGATG 2 cut(s) 1310, 2151
FriOI GRGCYC 2 cut(s) 1210, 1711
Fsp4HI GCNGC 6 cut(s) 20, 410, 422, 425, 1455, 1838
FspI TGCGCA 1 cut(s) 1921
GlaI GCGC 2 cut(s) 296, 1921
GluI GCNGC 6 cut(s) 20, 410, 422, 425, 1455, 1838
GsaI CCCAGC 1 cut(s) 2094
GsuI CTGGAG 1 cut(s) 2106
HaeII RGCGCY 1 cut(s) 298
HaeIII GGCC 2 cut(s) 949, 2212
HapII CCGG 2 cut(s) 137, 468
HhaI GCGC 2 cut(s) 297, 1922
Hin1I GRCGYC 1 cut(s) 295
Hin1II CATG 9 cut(s) 967, 1000, 1124, 1350, 1813, 1940, 2018, 2086, 2137
Hin6I GCGC 2 cut(s) 295, 1920
HinP1I GCGC 2 cut(s) 295, 1920
HincII GTYRAC 3 cut(s) 165, 478, 1554
HindII GTYRAC 3 cut(s) 165, 478, 1554
HindIII AAGCTT 3 cut(s) 899, 1199, 2038
HinfI GANTC 7 cut(s) 740, 928, 1180, 1266, 1287, 1514, 2179
HpaI GTTAAC 1 cut(s) 165
HpaII CCGG 2 cut(s) 137, 468
HphI GGTGA 6 cut(s) 662, 740, 994, 1057, 1259, 2033
Hpy166II GTNNAC 9 cut(s) 165, 478, 566, 613, 835, 1554, 1573, 1609, 2199
Hpy188I TCNGA 6 cut(s) 795, 933, 1040, 1581, 2059, 2079
Hpy8I GTNNAC 9 cut(s) 165, 478, 566, 613, 835, 1554, 1573, 1609, 2199
HpyAV CCTTC 7 cut(s) 58, 267, 582, 1238, 1256, 1673, 2000
HpyCH4III ACNGT 2 cut(s) 683, 921
HpyCH4IV ACGT 2 cut(s) 908, 1986
HpyCH4V TGCA 8 cut(s) 22, 84, 1170, 1418, 1424, 1704, 1840, 1949
HpyF10VI GCNNNNNNNGC 4 cut(s) 25, 303, 418, 1163
HpyF3I CTNAG 8 cut(s) 92, 665, 767, 1211, 1291, 1622, 1712, 2240
HpySE526I ACGT 2 cut(s) 908, 1986
Hsp92I GRCGYC 1 cut(s) 295
Hsp92II CATG 9 cut(s) 967, 1000, 1124, 1350, 1813, 1940, 2018, 2086, 2137
HspAI GCGC 2 cut(s) 295, 1920
KasI GGCGCC 1 cut(s) 294
KpnI GGTACC 2 cut(s) 1095, 1729
KroI GCCGGC 1 cut(s) 467
KroNI GCCGGC 1 cut(s) 469
KspAI GTTAAC 1 cut(s) 165
Kzo9I GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
LguI GCTCTTC 1 cut(s) 998
LmnI GCTCC 2 cut(s) 1205, 1676
Lsp1109I GCAGC 5 cut(s) 6, 396, 408, 1441, 1824
LweI GCATC 3 cut(s) 512, 1332, 2063
MaeII ACGT 2 cut(s) 908, 1986
MaeIII GTNAC 7 cut(s) 185, 394, 650, 982, 1076, 1778, 2021
MalI GATC 8 cut(s) 134, 141, 893, 1129, 1745, 1830, 1861, 1971
MboI GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
MboII GAAGA 9 cut(s) 185, 348, 366, 437, 985, 1189, 1494, 1727, 2038
MfeI CAATTG 1 cut(s) 1419
MflI RGATCY 3 cut(s) 1127, 1828, 1859
MhlI GDGCHC 3 cut(s) 102, 1210, 1711
Mly113I GGCGCC 1 cut(s) 295
MlyI GAGTC 1 cut(s) 1296
MroNI GCCGGC 1 cut(s) 467
MroXI GAANNNNTTC 3 cut(s) 226, 1335, 1545
MseI TTAA 6 cut(s) 164, 602, 1409, 1427, 1650, 1658
MslI CAYNNNNRTG 2 cut(s) 870, 2019
MspA1I CMGCKG 2 cut(s) 409, 2090
MspI CCGG 2 cut(s) 137, 468
MspR9I CCNGG 3 cut(s) 137, 198, 308
MunI CAATTG 1 cut(s) 1419
Mva1269I GAATGC 2 cut(s) 1706, 2244
MvaI CCWGG 2 cut(s) 198, 308
MwoI GCNNNNNNNGC 4 cut(s) 25, 303, 418, 1163
NaeI GCCGGC 1 cut(s) 469
NarI GGCGCC 1 cut(s) 295
NciI CCSGG 1 cut(s) 137
NcoI CCATGG 1 cut(s) 963
NdeII GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
NgoMIV GCCGGC 1 cut(s) 467
NlaIII CATG 9 cut(s) 967, 1000, 1124, 1350, 1813, 1940, 2018, 2086, 2137
NlaIV GGNNCC 5 cut(s) 296, 805, 1093, 1727, 2104
NmeAIII GCCGAG 1 cut(s) 1503
NmuCI GTSAC 3 cut(s) 650, 982, 2021
NsbI TGCGCA 1 cut(s) 1921
NspV TTCGAA 1 cut(s) 2049
OliI CACNNNNGTG 1 cut(s) 870
PaeR7I CTCGAG 1 cut(s) 1374
PciSI GCTCTTC 1 cut(s) 998
PcsI WCGNNNNNNNCGW 1 cut(s) 1992
PctI GAATGC 2 cut(s) 1706, 2244
PdiI GCCGGC 1 cut(s) 469
PdmI GAANNNNTTC 3 cut(s) 226, 1335, 1545
PfeI GAWTC 6 cut(s) 740, 928, 1180, 1266, 1514, 2179
PflFI GACNNNGTC 1 cut(s) 2083
PflMI CCANNNNNTGG 1 cut(s) 2129
PfoI TCCNGGA 2 cut(s) 135, 196
PkrI GCNGC 6 cut(s) 21, 411, 423, 426, 1456, 1839
PleI GAGTC 1 cut(s) 1295
PluTI GGCGCC 1 cut(s) 298
PpsI GAGTC 1 cut(s) 1295
PshBI ATTAAT 1 cut(s) 1427
PsiI TTATAA 1 cut(s) 366
Psp124BI GAGCTC 2 cut(s) 1210, 1711
Psp6I CCWGG 2 cut(s) 196, 306
PspEI GGTNACC 2 cut(s) 185, 650
PspFI CCCAGC 1 cut(s) 2090
PspGI CCWGG 2 cut(s) 196, 306
PspN4I GGNNCC 5 cut(s) 296, 805, 1093, 1727, 2104
PspPI GGNCC 4 cut(s) 349, 803, 947, 1487
PsuI RGATCY 3 cut(s) 1127, 1828, 1859
PsyI GACNNNGTC 1 cut(s) 2083
PvuII CAGCTG 2 cut(s) 409, 2090
RsaI GTAC 4 cut(s) 685, 1093, 1152, 1727
RsaNI GTAC 4 cut(s) 684, 1092, 1151, 1726
RseI CAYNNNNRTG 2 cut(s) 870, 2019
SacI GAGCTC 2 cut(s) 1210, 1711
SapI GCTCTTC 1 cut(s) 998
SaqAI TTAA 6 cut(s) 164, 602, 1409, 1427, 1650, 1658
SatI GCNGC 6 cut(s) 20, 410, 422, 425, 1455, 1838
Sau3AI GATC 8 cut(s) 132, 139, 891, 1127, 1743, 1828, 1859, 1969
Sau96I GGNCC 4 cut(s) 349, 803, 947, 1487
SchI GAGTC 1 cut(s) 1296
ScrFI CCNGG 3 cut(s) 137, 198, 308
SduI GDGCHC 3 cut(s) 102, 1210, 1711
SfaNI GCATC 3 cut(s) 512, 1332, 2063
SfcI CTRYAG 1 cut(s) 2167
SfoI GGCGCC 1 cut(s) 296
Sfr274I CTCGAG 1 cut(s) 1374
SfuI TTCGAA 1 cut(s) 2049
SinI GGWCC 3 cut(s) 349, 803, 1487
SlaI CTCGAG 1 cut(s) 1374
SmiMI CAYNNNNRTG 2 cut(s) 870, 2019
SmlI CTYRAG 4 cut(s) 692, 1374, 1739, 1759
SmoI CTYRAG 4 cut(s) 692, 1374, 1739, 1759
SpeI ACTAGT 1 cut(s) 1412
SsiI CCGC 4 cut(s) 425, 471, 1457, 1729
SspDI GGCGCC 1 cut(s) 294
SspI AATATT 2 cut(s) 370, 1900
SstI GAGCTC 2 cut(s) 1210, 1711
StyD4I CCNGG 3 cut(s) 135, 196, 306
StyI CCWWGG 3 cut(s) 963, 1140, 1832
TaaI ACNGT 2 cut(s) 683, 921
TaiI ACGT 2 cut(s) 911, 1989
TaqI TCGA 5 cut(s) 131, 326, 1375, 1995, 2049
TatI WGTACW 2 cut(s) 683, 1150
TauI GCSGC 1 cut(s) 427
TfiI GAWTC 6 cut(s) 740, 928, 1180, 1266, 1514, 2179
Tru1I TTAA 6 cut(s) 164, 602, 1409, 1427, 1650, 1658
Tru9I TTAA 6 cut(s) 164, 602, 1409, 1427, 1650, 1658
TscAI CASTG 6 cut(s) 58, 86, 397, 565, 636, 1771
TseFI GTSAC 3 cut(s) 650, 982, 2021
TseI GCWGC 5 cut(s) 19, 409, 421, 1454, 1837
Tsp45I GTSAC 3 cut(s) 650, 982, 2021
TspGWI ACGGA 2 cut(s) 1689, 2231
TspRI CASTG 6 cut(s) 58, 86, 397, 565, 636, 1771
Tth111I GACNNNGTC 1 cut(s) 2083
Van91I CCANNNNNTGG 1 cut(s) 2129
VpaK11BI GGWCC 3 cut(s) 349, 803, 1487
VspI ATTAAT 1 cut(s) 1427
XagI CCTNNNNNAGG 1 cut(s) 1260
XapI RAATTY 3 cut(s) 59, 482, 1187
XbaI TCTAGA 2 cut(s) 521, 1825
XhoI CTCGAG 1 cut(s) 1374
XmiI GTMKAC 1 cut(s) 1608
XmnI GAANNNNTTC 3 cut(s) 226, 1335, 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.