Prupe.7G125700_v2.0.a1

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0014540
Physical Location & Seq
Reverse (-)
14755941 .. 14757987
2047 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G125700.1

Sequence Viewer

Length: 618 bp
ATGGCGGTTCCAGGGAGGCGGAATGGTATGGAGGAAGATGACAACGAAGACGAAAACGCTCTGTTCGAAGAAGAGGGCTTGGAGGACCTCGACTCTCACACCCCTCCTCACCTTCGCGCCATCGCTGACGCTTCTCAGCAAGGCGACCTTGACGCCCTTCGCCTCGCTCTTGATAACTTAGAAGGAGGCAGCATTGATGAACCAGTGGAAGATGGGGACACAGCTCTCCATCTTGCATGTCTCTATGGCAATCTTTCTTGTGTGGAGTTACTTTTGGAGAGAGGTGCAAACTTGGAGGCTACGGATGAAGATGGAGCAATTCCTTTGCATGATGCTTGTGCTGGGGGCTACACTGAAATAGTTCAACTTTTGATTAATGGTGCTAATGACGCTGCCCGTGTAAAGAGAATGCTAGAAACAGTTGATGCCGAAGGCGATACTCCTCTTCATCATGCAGCGAGGGGTGAGCATGCTGATATTATAAGATTGTTGCTGGCTTCCGGAGCTTCTCCTACAAAGGCGAACCTATATGGAAAGATCCCAAGTGATTTACCAGAACTAGCTACAGAAGCTAGGACAATTTTGGAAGCTGCAGCTGGTGCGACGGCATGCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5

Protein Analysis

206

Amino Acids

21.67

Weight (kDa)

4.22

Isoelectric Point (pI)

39.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014540)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09890 AT3G09890
fragaria_vesca FvH4_6g16830
malus_domestica MD12G1106800.v1.1
prunus_persica Prupe.7G125700_v2.0.a1
pyrus_communis pycom12g10730
rosa_chinensis RchiOBHm_Chr3g0470841
rosa_laevigata RLG00000024241
rosa_multiflora Rmu_co8290787.1_g000001 Rmu_sc0002790.1_g000024
rosa_roxburghii Rroxscaffold_6G00410490
rosa_rugosa Rorug03G0113100
rosa_samantha Rh3AG162800 Rh3BG187900 Rh3CG177900 Rh3DG187900
rosa_wichuraiana Rw3G015330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 482
AccII CGCG 1 cut(s) 117
AccIII TCCGGA 1 cut(s) 500
AciI CCGC 2 cut(s) 5, 19
AclWI GGATC 1 cut(s) 532
AcyI GRCGYC 1 cut(s) 153
AgsI TTSAA 1 cut(s) 365
AjnI CCWGG 1 cut(s) 10
AluBI AGCT 6 cut(s) 224, 506, 563, 572, 590, 596
AluI AGCT 6 cut(s) 224, 506, 563, 572, 590, 596
Alw26I GTCTC 1 cut(s) 245
AlwI GGATC 1 cut(s) 532
Aor13HI TCCGGA 1 cut(s) 500
ApeKI GCWGC 5 cut(s) 189, 392, 455, 590, 593
AseI ATTAAT 1 cut(s) 375
Asp700I GAANNNNTTC 1 cut(s) 360
AspLEI GCGC 1 cut(s) 119
AspS9I GGNCC 1 cut(s) 85
AsuHPI GGTGA 2 cut(s) 101, 476
AsuII TTCGAA 1 cut(s) 66
AvaII GGWCC 1 cut(s) 85
BbsI GAAGAC 1 cut(s) 54
BbvI GCAGC 5 cut(s) 201, 379, 467, 577, 605
BccI CCATC 4 cut(s) 128, 206, 237, 305
BciT130I CCWGG 1 cut(s) 12
BcoDI GTCTC 1 cut(s) 245
BfaI CTAG 3 cut(s) 413, 560, 573
BfmI CTRYAG 2 cut(s) 564, 591
BisI GCNGC 5 cut(s) 190, 393, 456, 591, 594
BlsI GCNGC 5 cut(s) 191, 394, 457, 592, 595
Bme1390I CCNGG 1 cut(s) 12
Bme18I GGWCC 1 cut(s) 85
BmgT120I GGNCC 1 cut(s) 85
BmiI GGNNCC 1 cut(s) 9
BmrFI CCNGG 1 cut(s) 12
BmsI GCATC 2 cut(s) 322, 415
BpiI GAAGAC 1 cut(s) 54
Bpu14I TTCGAA 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 153
BsaJI CCNNGG 1 cut(s) 11
BsaWI WCCGGW 1 cut(s) 500
Bse1I ACTGG 2 cut(s) 203, 613
BseAI TCCGGA 1 cut(s) 500
BseBI CCWGG 1 cut(s) 12
BseDI CCNNGG 1 cut(s) 11
BseGI GGATG 1 cut(s) 310
BseMII CTCAG 1 cut(s) 149
BseNI ACTGG 2 cut(s) 203, 613
BseRI GAGGAG 2 cut(s) 96, 432
BseXI GCAGC 5 cut(s) 201, 379, 467, 577, 605
BseYI CCCAGC 1 cut(s) 341
Bsh1236I CGCG 1 cut(s) 117
BsiSI CCGG 1 cut(s) 501
BslFI GGGAC 1 cut(s) 230
BsmAI GTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 230
BsmI GAATGC 1 cut(s) 414
Bsp119I TTCGAA 1 cut(s) 66
Bsp13I TCCGGA 1 cut(s) 500
Bsp143I GATC 1 cut(s) 537
BspACI CCGC 2 cut(s) 5, 19
BspCNI CTCAG 1 cut(s) 148
BspEI TCCGGA 1 cut(s) 500
BspFNI CGCG 1 cut(s) 117
BspLI GGNNCC 1 cut(s) 9
BspMAI CTGCAG 1 cut(s) 595
BspPI GGATC 1 cut(s) 532
BspT104I TTCGAA 1 cut(s) 66
BsrI ACTGG 2 cut(s) 203, 613
BssECI CCNNGG 1 cut(s) 11
BssMI GATC 1 cut(s) 537
BssNI GRCGYC 1 cut(s) 153
Bst2UI CCWGG 1 cut(s) 12
Bst4CI ACNGT 1 cut(s) 421
Bst6I CTCTTC 2 cut(s) 66, 450
BstACI GRCGYC 1 cut(s) 153
BstAPI GCANNNNNTGC 1 cut(s) 599
BstBI TTCGAA 1 cut(s) 66
BstC8I GCNNGC 3 cut(s) 471, 495, 610
BstDEI CTNAG 2 cut(s) 135, 178
BstF5I GGATG 1 cut(s) 310
BstFNI CGCG 1 cut(s) 117
BstHHI GCGC 1 cut(s) 119
BstKTI GATC 1 cut(s) 540
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 1 cut(s) 537
BstMWI GCNNNNNNNGC 4 cut(s) 389, 503, 569, 599
BstNI CCWGG 1 cut(s) 12
BstNSI RCATGY 3 cut(s) 240, 473, 612
BstSCI CCNGG 1 cut(s) 10
BstSFI CTRYAG 2 cut(s) 564, 591
BstUI CGCG 1 cut(s) 117
BstV1I GCAGC 5 cut(s) 201, 379, 467, 577, 605
BstV2I GAAGAC 1 cut(s) 54
BstX2I RGATCY 1 cut(s) 537
BstYI RGATCY 1 cut(s) 537
BtgZI GCGATG 1 cut(s) 106
BtsCI GGATG 1 cut(s) 310
BtsIMutI CAGTG 2 cut(s) 210, 351
Cac8I GCNNGC 3 cut(s) 471, 495, 610
CfoI GCGC 1 cut(s) 119
Cfr13I GGNCC 1 cut(s) 85
CseI GACGC 3 cut(s) 137, 161, 398
CviAII CATG 5 cut(s) 237, 329, 452, 470, 609
DdeI CTNAG 2 cut(s) 135, 178
DpnI GATC 1 cut(s) 539
DpnII GATC 1 cut(s) 537
Eam1104I CTCTTC 2 cut(s) 66, 450
EarI CTCTTC 2 cut(s) 66, 450
EciI GGCGGA 1 cut(s) 34
Eco47I GGWCC 1 cut(s) 85
EcoO109I RGGNCCY 1 cut(s) 85
EcoRII CCWGG 1 cut(s) 10
FaeI CATG 5 cut(s) 240, 332, 455, 473, 612
FalI AAGNNNNNCTT 2 cut(s) 132, 164
FaqI GGGAC 1 cut(s) 230
FatI CATG 5 cut(s) 236, 328, 451, 469, 608
Fnu4HI GCNGC 5 cut(s) 190, 393, 456, 591, 594
FokI GGATG 1 cut(s) 317
Fsp4HI GCNGC 5 cut(s) 190, 393, 456, 591, 594
FspBI CTAG 3 cut(s) 413, 560, 573
GlaI GCGC 1 cut(s) 118
GluI GCNGC 5 cut(s) 190, 393, 456, 591, 594
GsaI CCCAGC 1 cut(s) 345
HapII CCGG 1 cut(s) 501
HgaI GACGC 3 cut(s) 137, 161, 398
HhaI GCGC 1 cut(s) 119
Hin1I GRCGYC 1 cut(s) 153
Hin1II CATG 5 cut(s) 240, 332, 455, 473, 612
Hin6I GCGC 1 cut(s) 117
HinP1I GCGC 1 cut(s) 117
HinfI GANTC 1 cut(s) 92
HpaII CCGG 1 cut(s) 501
HphI GGTGA 2 cut(s) 101, 476
Hpy188III TCNNGA 2 cut(s) 170, 501
Hpy99I CGWCG 1 cut(s) 607
HpyAV CCTTC 4 cut(s) 122, 167, 176, 425
HpyCH4III ACNGT 1 cut(s) 421
HpyCH4V TGCA 5 cut(s) 236, 287, 328, 455, 593
HpyF10VI GCNNNNNNNGC 4 cut(s) 389, 503, 569, 599
HpyF3I CTNAG 2 cut(s) 135, 178
Hsp92I GRCGYC 1 cut(s) 153
Hsp92II CATG 5 cut(s) 240, 332, 455, 473, 612
HspAI GCGC 1 cut(s) 117
Kpn2I TCCGGA 1 cut(s) 500
Kzo9I GATC 1 cut(s) 537
LmnI GCTCC 2 cut(s) 314, 503
LpnPI CCDG 7 cut(s) 24, 216, 327, 479, 514, 567, 582
Lsp1109I GCAGC 5 cut(s) 201, 379, 467, 577, 605
LweI GCATC 2 cut(s) 322, 415
MaeI CTAG 3 cut(s) 413, 560, 573
MaeIII GTNAC 1 cut(s) 267
MalI GATC 1 cut(s) 539
MboI GATC 1 cut(s) 537
MboII GAAGA 7 cut(s) 47, 59, 80, 83, 221, 320, 437
MflI RGATCY 1 cut(s) 537
MluCI AATT 2 cut(s) 318, 579
MlyI GAGTC 1 cut(s) 86
MroI TCCGGA 1 cut(s) 500
MroXI GAANNNNTTC 1 cut(s) 360
MseI TTAA 1 cut(s) 375
MspA1I CMGCKG 1 cut(s) 596
MspI CCGG 1 cut(s) 501
MspR9I CCNGG 1 cut(s) 12
Mva1269I GAATGC 1 cut(s) 414
MvaI CCWGG 1 cut(s) 12
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 4 cut(s) 389, 503, 569, 599
NdeII GATC 1 cut(s) 537
NlaIII CATG 5 cut(s) 240, 332, 455, 473, 612
NlaIV GGNNCC 1 cut(s) 9
NspI RCATGY 3 cut(s) 240, 473, 612
NspV TTCGAA 1 cut(s) 66
PaeI GCATGC 2 cut(s) 473, 612
PcsI WCGNNNNNNNCGW 1 cut(s) 63
PctI GAATGC 1 cut(s) 414
PdmI GAANNNNTTC 1 cut(s) 360
PkrI GCNGC 5 cut(s) 191, 394, 457, 592, 595
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
PpuMI RGGWCCY 1 cut(s) 85
PshBI ATTAAT 1 cut(s) 375
PsiI TTATAA 1 cut(s) 482
Psp5II RGGWCCY 1 cut(s) 85
Psp6I CCWGG 1 cut(s) 10
PspFI CCCAGC 1 cut(s) 341
PspGI CCWGG 1 cut(s) 10
PspN4I GGNNCC 1 cut(s) 9
PspPI GGNCC 1 cut(s) 85
PspPPI RGGWCCY 1 cut(s) 85
PstI CTGCAG 1 cut(s) 595
PsuI RGATCY 1 cut(s) 537
PvuII CAGCTG 1 cut(s) 596
SaqAI TTAA 1 cut(s) 375
SatI GCNGC 5 cut(s) 190, 393, 456, 591, 594
Sau3AI GATC 1 cut(s) 537
Sau96I GGNCC 1 cut(s) 85
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 1 cut(s) 12
SfaNI GCATC 2 cut(s) 322, 415
SfcI CTRYAG 2 cut(s) 564, 591
SfuI TTCGAA 1 cut(s) 66
SinI GGWCC 1 cut(s) 85
SphI GCATGC 2 cut(s) 473, 612
Sse9I AATT 2 cut(s) 318, 579
SsiI CCGC 2 cut(s) 5, 19
SspMI CTAG 3 cut(s) 413, 560, 573
StyD4I CCNGG 1 cut(s) 10
TaaI ACNGT 1 cut(s) 421
TaqI TCGA 2 cut(s) 66, 90
TasI AATT 2 cut(s) 318, 579
Tru1I TTAA 1 cut(s) 375
Tru9I TTAA 1 cut(s) 375
TscAI CASTG 2 cut(s) 210, 358
TseI GCWGC 5 cut(s) 189, 392, 455, 590, 593
TspDTI ATGAA 3 cut(s) 213, 321, 437
TspGWI ACGGA 1 cut(s) 317
TspRI CASTG 2 cut(s) 210, 358
VpaK11BI GGWCC 1 cut(s) 85
VspI ATTAAT 1 cut(s) 375
XceI RCATGY 3 cut(s) 240, 473, 612
XmnI GAANNNNTTC 1 cut(s) 360
XspI CTAG 3 cut(s) 413, 560, 573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.