Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006253

Physical Location & Seq

Genomic Coordinates Forward (+)

14879092 .. 14885749

Gene Structure 6658 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G128300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGAGATTGACAAGGCAATCACAGAGTGTGATGATCGAAGGCTCAAGACGAAGTACAGCAACGCTATCTATGTTATTCAGAGAACTCTTGCGCTGTACTCAATTGAGGAGGTCGCCTTCAGCTTTAATGGGGGAAAGGATTCAACTGTTTTGCTGCACCTACTTAGGGCTGGCTACTTTTTGCATAAGGGGGAGAAAAGCTGTTCTAATGGTGATGTAAAAGACTTTCCAATCCGAACAATATATTTTGAGTCCCCATCTGCTTTCCCCGAGATCAACTCTTTTACTTATGATACGGCCACTACCTATGGTTTGCAACTGGATATCATTCGCTCAGATTTCAAGTCTGGCTTGGAGGCTTTACTTAATGCGAAACCAATCAAAGCTATTTTCCTTGGTGTCCGTATGGGTGATCCTACTGCGGTTGGTCAAGAACAGTTCTCTCCTAGTTCACTTGGATGGCCACCTTTCATGAGGGTGAATCCTATATTGGATTGGTCATACAGAGATGTGTGGGCTTTTCTCTTAACTTGCAAAGTTCCATACTGCAGTCTATATGATCAAGGTTACACTTCCATTGGAAGCATCTATGACACAGTTCCAAATGCATTATTGTGCATTAACAATTCCTCCGGCAGCAAAGAAGTATTTAGACCTGCATATTTGCTTTCTGATGGAAGATTAGAGAGAGCTGGGAGAGTTAAAAAACTTCCTTCATCAGTTAGTGGGCATAACCCTGCTGTTATCAATGGCCTTGACAATATGGACTTGCATAATAGAAGCCTACTCACGGCCTCAGCCATTGCTGTGGGAGATGAGATTTTGTTTGGCACTGTTGAGGATCAAATAGGGCCTTCATTGTGTAGAAAGCTCCATTCTTTTGGCTGGTTGGTATCACAAACTGCTGTTGTTCGGAATGATATAGATTCTGTGGCTGAAGAAGTCGAGCGACGACAATCAACTGATGATATGGTATTTATATATGGAGGGGTAGGCCCACTGCACTCAGATGTCACTACGGCAGGTGTTGCAAAGGCTTTTGGGGTTCGTCTGGCTCCTGATGAAGAATTTGAAGAATATCTGAGGCATCTTATAGGTGATCAATGCACTGGTGACCGGAATGAGATGGCTCTGTTGCCTGAAGGTATTACTGAGTTGTTGCATCATGAAAAGCTGATTGTCCCCTTGATTAAGTGTAAAAATGTAATAATCCTTACTGCAACAAATGCCTTGGAGCTGGATGAGGAGTGGAACTGTCTAATTGAACTAATGACATCCGATGATGTGCTACTAATGATGCAATCATTTGTATCTAAGCATTTGACAACAAATCTTACAGATGTAGAAATTGCTCGACCTCTGTCAAAACTTTGCCTTGAATTTCCAGACCTTTACATTGGTTGTCATCGCAAATCCAGAAAGGAGCCTCTTGTACTTTATTTCAAGGGCAAGGACCAAGATCGAATTGAATCAGCTGTAGAAGCATTGAACAAGAAGTTCTGTCCGGGGGCTTTCGTTGAAATCAACTCCAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003919 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006139 GO:0006725 GO:0006732 GO:0006747 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009117 GO:0009165 GO:0009987 GO:0016020 GO:0016740 GO:0016772 GO:0016779 GO:0018130 GO:0019438 GO:0019637 GO:0034641 GO:0034654 GO:0042726 GO:0042727 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046443 GO:0046483 GO:0051186 GO:0051188 GO:0055086 GO:0055114 GO:0070566 GO:0071704 GO:0071944 GO:0072387 GO:0072388 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00740 ko01100 ko01110 map00740 map01100 map01110

Pfam Domains

Protein Families

MoCF_biosynth PAPS_reduct

Protein Analysis

512

Amino Acids

56.98

Weight (kDa)

5.25

Isoelectric Point (pI)

41.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006253)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G03430
fragaria_vesca	FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530 FvH4_6g16530
malus_domestica	MD04G1091700.v1.1 MD12G1109700.v1.1
prunus_persica	Prupe.7G128300_v2.0.a1
pyrus_communis	pycom04g08640
rosa_chinensis	RchiOBHm_Chr3g0470441
rosa_laevigata	RLG00000024267
rosa_multiflora	Rmu_sc0002383.1_g000006
rosa_roxburghii	Rroxscaffold_6G00410810
rosa_rugosa	Rorug03G0108900 Rorug03G0109000 Rorug03G0109100
rosa_samantha	Rh3AG159400 Rh3BG183800 Rh3CG174400 Rh3DG190900
rosa_wichuraiana	Rw3G015090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1013
Acc36I	ACCTGC	2 cut(s)	664, 1013
AciI	CCGC	1 cut(s)	422
AclWI	GGATC	2 cut(s)	407, 849
AcoI	YGGCCR	2 cut(s)	297, 461
AcsI	RAATTY	2 cut(s)	1067, 1379
AcuI	CTGAAG	3 cut(s)	103, 957, 1161
AdeI	CACNNNGTG	1 cut(s)	27
AfaI	GTAC	3 cut(s)	56, 98, 1434
AfiI	CCNNNNNNNGG	2 cut(s)	166, 790
AgsI	TTSAA	9 cut(s)	144, 343, 1073, 1265, 1379, 1444, 1469, 1489, 1520
AjuI	GAANNNNNNNTTGG	2 cut(s)	473, 505
AluBI	AGCT	8 cut(s)	123, 201, 386, 692, 871, 1174, 1237, 1475
AluI	AGCT	8 cut(s)	123, 201, 386, 692, 871, 1174, 1237, 1475
AlwI	GGATC	2 cut(s)	407, 849
Ama87I	CYCGRG	1 cut(s)	269
AoxI	GGCC	6 cut(s)	297, 461, 751, 792, 851, 994
ApeKI	GCWGC	2 cut(s)	154, 636
ApoI	RAATTY	2 cut(s)	1067, 1379
Asp700I	GAANNNNTTC	1 cut(s)	139
AspLEI	GCGC	1 cut(s)	94
AspS9I	GGNCC	3 cut(s)	851, 995, 1453
AsuC2I	CCSGG	1 cut(s)	1506
AsuHPI	GGTGA	5 cut(s)	224, 422, 490, 1109, 1124
AvaI	CYCGRG	1 cut(s)	269
AvaII	GGWCC	1 cut(s)	1453
BalI	TGGCCA	1 cut(s)	463
BbvCI	CCTCAGC	1 cut(s)	796
BbvI	GCAGC	2 cut(s)	141, 648
BccI	CCATC	4 cut(s)	265, 453, 668, 1120
BceAI	ACGGC	3 cut(s)	312, 807, 1035
BclI	TGATCA	2 cut(s)	559, 1099
BcnI	CCSGG	1 cut(s)	1506
BfaI	CTAG	1 cut(s)	447
BfmI	CTRYAG	2 cut(s)	547, 1476
BfuAI	ACCTGC	2 cut(s)	664, 1013
BisI	GCNGC	2 cut(s)	155, 637
BlsI	GCNGC	2 cut(s)	156, 638
Bme1390I	CCNGG	1 cut(s)	1506
Bme18I	GGWCC	1 cut(s)	1453
BmeT110I	CYCGRG	1 cut(s)	269
BmgT120I	GGNCC	3 cut(s)	851, 995, 1453
BmiI	GGNNCC	2 cut(s)	1056, 1425
BmrFI	CCNGG	1 cut(s)	1506
BmsI	GCATC	4 cut(s)	594, 1096, 1171, 1287
BoxI	GACNNNNGTC	1 cut(s)	1360
BplI	GAGNNNNNCTC	2 cut(s)	263, 295
BpmI	CTGGAG	1 cut(s)	1513
Bpu10I	CCTNAGC	1 cut(s)	796
BpuEI	CTTGAG	1 cut(s)	29
BpuMI	CCSGG	1 cut(s)	1506
BsaJI	CCNNGG	3 cut(s)	394, 1230, 1505
BsaWI	WCCGGW	1 cut(s)	1116
BsaXI	ACNNNNNCTCC	2 cut(s)	614, 644
Bsc4I	CCNNNNNNNGG	2 cut(s)	166, 790
Bse1I	ACTGG	3 cut(s)	324, 1114, 1530
Bse3DI	GCAATG	1 cut(s)	801
BseDI	CCNNGG	3 cut(s)	394, 1230, 1505
BseGI	GGATG	3 cut(s)	464, 1246, 1274
BseLI	CCNNNNNNNGG	2 cut(s)	166, 790
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	5 cut(s)	348, 810, 1020, 1073, 1143
BseNI	ACTGG	3 cut(s)	324, 1114, 1530
BseRI	GAGGAG	2 cut(s)	122, 1259
BseXI	GCAGC	2 cut(s)	141, 648
BseYI	CCCAGC	1 cut(s)	692
BsgI	GTGCAG	2 cut(s)	140, 986
BshFI	GGCC	6 cut(s)	299, 463, 753, 794, 853, 996
BsiHKCI	CYCGRG	1 cut(s)	269
BsiSI	CCGG	3 cut(s)	633, 1117, 1505
BslFI	GGGAC	2 cut(s)	238, 1166
BslI	CCNNNNNNNGG	2 cut(s)	166, 790
BsmFI	GGGAC	2 cut(s)	238, 1166
BsnI	GGCC	6 cut(s)	299, 463, 753, 794, 853, 996
BsoBI	CYCGRG	1 cut(s)	269
Bsp143I	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
BspACI	CCGC	1 cut(s)	422
BspANI	GGCC	6 cut(s)	299, 463, 753, 794, 853, 996
BspCNI	CTCAG	5 cut(s)	347, 809, 1019, 1074, 1144
BspHI	TCATGA	2 cut(s)	471, 1165
BspLI	GGNNCC	2 cut(s)	1056, 1425
BspMAI	CTGCAG	1 cut(s)	551
BspMI	ACCTGC	2 cut(s)	664, 1013
BspPI	GGATC	2 cut(s)	407, 849
BsrDI	GCAATG	1 cut(s)	801
BsrI	ACTGG	3 cut(s)	324, 1114, 1530
BssECI	CCNNGG	3 cut(s)	394, 1230, 1505
BssMI	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
BssT1I	CCWWGG	2 cut(s)	394, 1230
Bst4CI	ACNGT	5 cut(s)	148, 438, 598, 835, 1256
BstAPI	GCANNNNNTGC	2 cut(s)	1028, 1226
BstC8I	GCNNGC	1 cut(s)	172
BstDEI	CTNAG	7 cut(s)	164, 334, 796, 1006, 1082, 1152, 1314
BstEII	GGTNACC	1 cut(s)	1112
BstF5I	GGATG	3 cut(s)	464, 1246, 1274
BstHHI	GCGC	1 cut(s)	94
BstKTI	GATC	7 cut(s)	37, 276, 415, 562, 844, 1102, 1462
BstMBI	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
BstMWI	GCNNNNNNNGC	3 cut(s)	1028, 1226, 1481
BstPAI	GACNNNNGTC	1 cut(s)	1360
BstPI	GGTNACC	1 cut(s)	1112
BstSCI	CCNGG	1 cut(s)	1504
BstSFI	CTRYAG	2 cut(s)	547, 1476
BstV1I	GCAGC	2 cut(s)	141, 648
BstXI	CCANNNNNNTGG	2 cut(s)	808, 881
BsuRI	GGCC	6 cut(s)	299, 463, 753, 794, 853, 996
BtgZI	GCGATG	1 cut(s)	1391
BtsCI	GGATG	3 cut(s)	464, 1246, 1274
BtsI	GCAGTG	1 cut(s)	998
BtsIMutI	CAGTG	3 cut(s)	831, 998, 1107
BveI	ACCTGC	2 cut(s)	664, 1013
Cac8I	GCNNGC	1 cut(s)	172
CciI	TCATGA	2 cut(s)	471, 1165
CfoI	GCGC	1 cut(s)	94
Cfr13I	GGNCC	3 cut(s)	851, 995, 1453
Csp6I	GTAC	3 cut(s)	55, 97, 1433
CviAII	CATG	2 cut(s)	472, 1166
CviQI	GTAC	3 cut(s)	55, 97, 1433
DdeI	CTNAG	7 cut(s)	164, 334, 796, 1006, 1082, 1152, 1314
DpnI	GATC	7 cut(s)	36, 275, 414, 561, 843, 1101, 1461
DpnII	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
DraIII	CACNNNGTG	1 cut(s)	27
EaeI	YGGCCR	2 cut(s)	297, 461
Eco130I	CCWWGG	2 cut(s)	394, 1230
Eco32I	GATATC	1 cut(s)	325
Eco47I	GGWCC	1 cut(s)	1453
Eco57I	CTGAAG	3 cut(s)	103, 957, 1161
Eco88I	CYCGRG	1 cut(s)	269
Eco91I	GGTNACC	1 cut(s)	1112
EcoO109I	RGGNCCY	1 cut(s)	851
EcoO65I	GGTNACC	1 cut(s)	1112
EcoRV	GATATC	1 cut(s)	325
EcoT14I	CCWWGG	2 cut(s)	394, 1230
EcoT22I	ATGCAT	1 cut(s)	610
ErhI	CCWWGG	2 cut(s)	394, 1230
FaeI	CATG	2 cut(s)	475, 1169
FalI	AAGNNNNNCTT	2 cut(s)	335, 367
FaqI	GGGAC	2 cut(s)	238, 1166
FatI	CATG	2 cut(s)	471, 1165
FbaI	TGATCA	2 cut(s)	559, 1099
Fnu4HI	GCNGC	2 cut(s)	155, 637
FokI	GGATG	3 cut(s)	471, 1253, 1261
Fsp4HI	GCNGC	2 cut(s)	155, 637
FspBI	CTAG	1 cut(s)	447
GlaI	GCGC	1 cut(s)	93
GluI	GCNGC	2 cut(s)	155, 637
GsaI	CCCAGC	1 cut(s)	696
GsuI	CTGGAG	1 cut(s)	1513
HaeIII	GGCC	6 cut(s)	299, 463, 753, 794, 853, 996
HapII	CCGG	3 cut(s)	633, 1117, 1505
HhaI	GCGC	1 cut(s)	94
Hin1II	CATG	2 cut(s)	475, 1169
Hin6I	GCGC	1 cut(s)	92
HinP1I	GCGC	1 cut(s)	92
HinfI	GANTC	5 cut(s)	140, 251, 481, 926, 1469
HpaII	CCGG	3 cut(s)	633, 1117, 1505
HphI	GGTGA	5 cut(s)	224, 422, 490, 1109, 1124
Hpy166II	GTNNAC	1 cut(s)	452
Hpy188I	TCNGA	8 cut(s)	81, 236, 337, 673, 915, 1009, 1083, 1279
Hpy188III	TCNNGA	7 cut(s)	46, 431, 472, 1058, 1166, 1385, 1416
Hpy8I	GTNNAC	1 cut(s)	452
Hpy99I	CGWCG	1 cut(s)	954
HpyAV	CCTTC	5 cut(s)	33, 127, 723, 864, 1136
HpyCH4III	ACNGT	5 cut(s)	148, 438, 598, 835, 1256
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1028, 1226, 1481
HpyF3I	CTNAG	7 cut(s)	164, 334, 796, 1006, 1082, 1152, 1314
Hsp92II	CATG	2 cut(s)	475, 1169
HspAI	GCGC	1 cut(s)	92
Ksp22I	TGATCA	2 cut(s)	559, 1099
Kzo9I	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
LmnI	GCTCC	4 cut(s)	876, 1060, 1234, 1423
Lsp1109I	GCAGC	2 cut(s)	141, 648
LweI	GCATC	4 cut(s)	594, 1096, 1171, 1287
MaeI	CTAG	1 cut(s)	447
MaeIII	GTNAC	3 cut(s)	566, 1012, 1112
MalI	GATC	7 cut(s)	36, 275, 414, 561, 843, 1101, 1461
MboI	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
MboII	GAAGA	4 cut(s)	690, 950, 1076, 1085
MfeI	CAATTG	1 cut(s)	102
MlsI	TGGCCA	1 cut(s)	463
MluCI	AATT	7 cut(s)	102, 625, 1067, 1260, 1347, 1379, 1464
MluNI	TGGCCA	1 cut(s)	463
MlyI	GAGTC	1 cut(s)	260
Mox20I	TGGCCA	1 cut(s)	463
Mph1103I	ATGCAT	1 cut(s)	610
MroXI	GAANNNNTTC	1 cut(s)	139
MscI	TGGCCA	1 cut(s)	463
MseI	TTAA	7 cut(s)	126, 366, 527, 621, 702, 1191, 1534
MslI	CAYNNNNRTG	5 cut(s)	457, 476, 613, 806, 1008
Msp20I	TGGCCA	1 cut(s)	463
MspA1I	CMGCKG	1 cut(s)	1475
MspI	CCGG	3 cut(s)	633, 1117, 1505
MspR9I	CCNGG	1 cut(s)	1506
MunI	CAATTG	1 cut(s)	102
MwoI	GCNNNNNNNGC	3 cut(s)	1028, 1226, 1481
NciI	CCSGG	1 cut(s)	1506
NdeII	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
NlaIII	CATG	2 cut(s)	475, 1169
NlaIV	GGNNCC	2 cut(s)	1056, 1425
NmuCI	GTSAC	2 cut(s)	1012, 1112
NsiI	ATGCAT	1 cut(s)	610
PagI	TCATGA	2 cut(s)	471, 1165
PaqCI	CACCTGC	1 cut(s)	1013
PdmI	GAANNNNTTC	1 cut(s)	139
PfeI	GAWTC	4 cut(s)	140, 481, 926, 1469
PkrI	GCNGC	2 cut(s)	156, 638
PleI	GAGTC	1 cut(s)	259
PpsI	GAGTC	1 cut(s)	259
PshAI	GACNNNNGTC	1 cut(s)	1360
PspEI	GGTNACC	1 cut(s)	1112
PspFI	CCCAGC	1 cut(s)	692
PspN4I	GGNNCC	2 cut(s)	1056, 1425
PspPI	GGNCC	3 cut(s)	851, 995, 1453
PstI	CTGCAG	1 cut(s)	551
PvuII	CAGCTG	1 cut(s)	1475
RsaI	GTAC	3 cut(s)	56, 98, 1434
RsaNI	GTAC	3 cut(s)	55, 97, 1433
RseI	CAYNNNNRTG	5 cut(s)	457, 476, 613, 806, 1008
SaqAI	TTAA	7 cut(s)	126, 366, 527, 621, 702, 1191, 1534
SatI	GCNGC	2 cut(s)	155, 637
Sau3AI	GATC	7 cut(s)	34, 273, 412, 559, 841, 1099, 1459
Sau96I	GGNCC	3 cut(s)	851, 995, 1453
SchI	GAGTC	1 cut(s)	260
ScrFI	CCNGG	1 cut(s)	1506
SfaNI	GCATC	4 cut(s)	594, 1096, 1171, 1287
SfcI	CTRYAG	2 cut(s)	547, 1476
SinI	GGWCC	1 cut(s)	1453
SmiMI	CAYNNNNRTG	5 cut(s)	457, 476, 613, 806, 1008
SmlI	CTYRAG	1 cut(s)	44
SmoI	CTYRAG	1 cut(s)	44
Sse9I	AATT	7 cut(s)	102, 625, 1067, 1260, 1347, 1379, 1464
SsiI	CCGC	1 cut(s)	422
SspMI	CTAG	1 cut(s)	447
StyD4I	CCNGG	1 cut(s)	1504
StyI	CCWWGG	2 cut(s)	394, 1230
TaaI	ACNGT	5 cut(s)	148, 438, 598, 835, 1256
TaqI	TCGA	4 cut(s)	37, 945, 1354, 1462
TasI	AATT	7 cut(s)	102, 625, 1067, 1260, 1347, 1379, 1464
TatI	WGTACW	3 cut(s)	54, 96, 1432
TfiI	GAWTC	4 cut(s)	140, 481, 926, 1469
Tru1I	TTAA	7 cut(s)	126, 366, 527, 621, 702, 1191, 1534
Tru9I	TTAA	7 cut(s)	126, 366, 527, 621, 702, 1191, 1534
TscAI	CASTG	3 cut(s)	838, 1005, 1114
TseFI	GTSAC	2 cut(s)	1012, 1112
TseI	GCWGC	2 cut(s)	154, 636
Tsp45I	GTSAC	2 cut(s)	1012, 1112
TspDTI	ATGAA	5 cut(s)	460, 705, 846, 1077, 1182
TspGWI	ACGGA	1 cut(s)	392
TspRI	CASTG	3 cut(s)	838, 1005, 1114
VpaK11BI	GGWCC	1 cut(s)	1453
XapI	RAATTY	2 cut(s)	1067, 1379
XmnI	GAANNNNTTC	1 cut(s)	139
XspI	CTAG	1 cut(s)	447
Zsp2I	ATGCAT	1 cut(s)	610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.