pycom04g08640

Phosphoadenosine phosphosulfate reductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
10490370 .. 10498688
8319 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g08640.2

Sequence Viewer

Length: 1536 bp
ATGGAGATTGACAAGGCAATCAAAGAGTGTGATGATCGAAGGCTGAAGACCAAGTACAACAATGCTATCTATGTTATTCAGAGAGCTCTTGCGCTCTACTCTATTGAAGAGGTTGCCTTCAGCTTCAATGGGGGAAAGGATTCAACTGTTTTGTTGCACCTACTCAGGGCTGGCTACTATTTGCATAAAGGGGAGCAAAGCTGTTCTAACGAGGATGTGAAAGATTTTCCTATTCGAACGATATATTTTGAGAGCCCATCTGCTTTCCCTGAAATCAACTCGTTTACTTATGATGCAGCCACTACCTATGGTTTGCAACTGGATATCATCCGCTCTGATTTCAAGTCTGGTTTGGAGGACTTACTTAAATCAAAACCAATCAAAGCTATTTTCCTTGGTGTCCGAATCGATGATCCTACTGCGGTTGGTCAAGATCAATTCTCTCCTAGTTCAGTTGGATGGCCACCCTTCATGAGGGTGAATCCTATATTGGATTGGTCATACAGAGATGTGTGGGCCTTTCTCTTAACTTGCAAATTGCAGTACTGCAGTCTTTATGATCAAGGTTATACTTCAATTGGAAGCATACATGACACAGTTCCAAATGCATTATTGAGCATTAACAATTCATCTGAAAACAGAGAAGTATTTAGACCTGCGTATTTACTTTCTGATGGAAGATTAGAGAGAGCCGGGAGGGTTAAAAAACTTCCTCCTTCAGTTCATGGGAATAAGCCTGCTACTATCAATGGCCTTGATGGTGTGGGCTTACATAAAAGTGGCCTACTCATGGCCTCAGCCATTGCTGTGGGGGATGAGATTCTGTTTGGCACTGTTGAGGATCAATTAGGGCCTTCACTGTGTAAAAAGCTCCATTCTATTGGCTGGTCGGTATCACAAACTGTTGTTGTTCGGAATGATATAGATGCTGTGGCCGAAGAAGTCGAGCGACGCCAATCAACTAATGATATGGTATTTATGTATGGAGGGGTTGGCCCACTGCACTCAGATGTCACTTTGGCTGGTGTTGCAAAGGCTTTCGCGGTTCGTCTGGCACCTGATGAAGAATTTGAAGAATATCTGAGGCATCTTATAGGTGATCAATGCACTGGTGACCGGAATGAGATGGCTCTGTTGCCTGAAGGTATCACTGAACTATTGCATCATGAAAAGCTGATCGTCCCTTTGATCAAGTGTAAAAATGTAATAATCCTTACGGCAACAAATGTCTTGGAGCTGGATGAGCAGTGGAACTGTCTAATTGAACTAATGATATCTGATGGTGCGCTAGCAACGTTGCAACCATTTGTATCTAGGCACTTGACAACAAACCTTACAGATGTAGAAATTGCTCAACCTCTGTCAAAACTTTGCCTGGAATTTTCAGACCTTTACATTGGTTGTCGTCGCAAATCAAGGAAGGAGCCTCTTATAATCTATTTTGAGGGCAAGGACCAAGATCGAATTCAATCAGCCATAGAGGCATTGTGCAAGAAGTTCCATCCGGGGGCTTTCGTAGAAATGGACTCAAGTTGA

Protein Analysis

512

Amino Acids

57.05

Weight (kDa)

5.3

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1433
Acc36I ACCTGC 1 cut(s) 664
AccB1I GGYRCC 1 cut(s) 1054
AccBSI CCGCTC 1 cut(s) 333
AccII CGCG 1 cut(s) 1043
AciI CCGC 3 cut(s) 331, 422, 1043
AclI AACGTT 1 cut(s) 1295
AclWI GGATC 2 cut(s) 407, 849
AcoI YGGCCR 2 cut(s) 461, 933
AcsI RAATTY 3 cut(s) 1067, 1379, 1464
AcuI CTGAAG 4 cut(s) 65, 103, 702, 1161
AcyI GRCGYC 1 cut(s) 952
AfaI GTAC 2 cut(s) 56, 545
AfiI CCNNNNNNNGG 4 cut(s) 166, 474, 790, 1507
AgsI TTSAA 8 cut(s) 107, 127, 144, 343, 576, 1073, 1265, 1469
AjnI CCWGG 1 cut(s) 1374
AjuI GAANNNNNNNTTGG 4 cut(s) 473, 505, 1449, 1481
AluBI AGCT 7 cut(s) 86, 123, 201, 386, 871, 1174, 1237
AluI AGCT 7 cut(s) 86, 123, 201, 386, 871, 1174, 1237
Alw21I GWGCWC 1 cut(s) 88
AlwI GGATC 2 cut(s) 407, 849
AoxI GGCC 8 cut(s) 461, 516, 751, 781, 792, 851, 933, 994
ApeKI GCWGC 1 cut(s) 296
ApoI RAATTY 3 cut(s) 1067, 1379, 1464
Asp700I GAANNNNTTC 1 cut(s) 139
AspLEI GCGC 2 cut(s) 94, 1288
AspS9I GGNCC 4 cut(s) 516, 851, 995, 1453
AsuC2I CCSGG 2 cut(s) 694, 1506
AsuHPI GGTGA 3 cut(s) 490, 1109, 1124
AsuII TTCGAA 1 cut(s) 235
AsuNHI GCTAGC 1 cut(s) 1288
AvaII GGWCC 1 cut(s) 1453
BalI TGGCCA 1 cut(s) 463
BanI GGYRCC 1 cut(s) 1054
BanII GRGCYC 2 cut(s) 88, 257
BarI GAAGNNNNNNTAC 2 cut(s) 38, 70
BbsI GAAGAC 1 cut(s) 53
Bbv12I GWGCWC 1 cut(s) 88
BbvCI CCTCAGC 1 cut(s) 796
BbvI GCAGC 1 cut(s) 308
BccI CCATC 7 cut(s) 265, 453, 668, 752, 1120, 1274, 1509
BceAI ACGGC 1 cut(s) 1233
BciT130I CCWGG 1 cut(s) 1376
BclI TGATCA 3 cut(s) 559, 1099, 1188
BcnI CCSGG 2 cut(s) 694, 1506
BfaI CTAG 3 cut(s) 447, 1289, 1314
BfmI CTRYAG 1 cut(s) 547
BfuAI ACCTGC 1 cut(s) 664
BglI GCCNNNNNGGC 1 cut(s) 1481
BisI GCNGC 1 cut(s) 297
BlsI GCNGC 1 cut(s) 298
BmcAI AGTACT 1 cut(s) 545
Bme1390I CCNGG 3 cut(s) 694, 1376, 1506
Bme18I GGWCC 1 cut(s) 1453
BmgT120I GGNCC 4 cut(s) 516, 851, 995, 1453
BmiI GGNNCC 2 cut(s) 1056, 1425
BmrFI CCNGG 3 cut(s) 694, 1376, 1506
BmsI GCATC 4 cut(s) 283, 916, 1096, 1171
BmtI GCTAGC 1 cut(s) 1292
BpiI GAAGAC 1 cut(s) 53
Bpu10I CCTNAGC 1 cut(s) 796
Bpu14I TTCGAA 1 cut(s) 235
BpuEI CTTGAG 1 cut(s) 1513
BpuMI CCSGG 2 cut(s) 694, 1506
Bsa29I ATCGAT 1 cut(s) 408
BsaHI GRCGYC 1 cut(s) 952
BsaJI CCNNGG 2 cut(s) 394, 1505
BsaWI WCCGGW 1 cut(s) 1116
Bsc4I CCNNNNNNNGG 4 cut(s) 166, 474, 790, 1507
Bse1I ACTGG 2 cut(s) 324, 1114
Bse3DI GCAATG 1 cut(s) 801
BseBI CCWGG 1 cut(s) 1376
BseCI ATCGAT 1 cut(s) 408
BseDI CCNNGG 2 cut(s) 394, 1505
BseGI GGATG 6 cut(s) 220, 327, 464, 820, 1246, 1501
BseLI CCNNNNNNNGG 4 cut(s) 166, 474, 790, 1507
BseMI GCAATG 1 cut(s) 801
BseMII CTCAG 4 cut(s) 178, 810, 1020, 1073
BseNI ACTGG 2 cut(s) 324, 1114
BseXI GCAGC 1 cut(s) 308
BsgI GTGCAG 1 cut(s) 986
Bsh1236I CGCG 1 cut(s) 1043
BshFI GGCC 8 cut(s) 463, 518, 753, 783, 794, 853, 935, 996
BshNI GGYRCC 1 cut(s) 1054
BshVI ATCGAT 1 cut(s) 408
BsiHKAI GWGCWC 1 cut(s) 88
BsiSI CCGG 3 cut(s) 693, 1117, 1505
BslFI GGGAC 1 cut(s) 1166
BslI CCNNNNNNNGG 4 cut(s) 166, 474, 790, 1507
BsmFI GGGAC 1 cut(s) 1166
BsnI GGCC 8 cut(s) 463, 518, 753, 783, 794, 853, 935, 996
Bsp119I TTCGAA 1 cut(s) 235
Bsp1286I GDGCHC 2 cut(s) 88, 257
Bsp143I GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
BspACI CCGC 3 cut(s) 331, 422, 1043
BspANI GGCC 8 cut(s) 463, 518, 753, 783, 794, 853, 935, 996
BspCNI CTCAG 4 cut(s) 177, 809, 1019, 1074
BspDI ATCGAT 1 cut(s) 408
BspFNI CGCG 1 cut(s) 1043
BspHI TCATGA 2 cut(s) 471, 1165
BspLI GGNNCC 2 cut(s) 1056, 1425
BspMAI CTGCAG 1 cut(s) 551
BspMI ACCTGC 1 cut(s) 664
BspOI GCTAGC 1 cut(s) 1292
BspPI GGATC 2 cut(s) 407, 849
BspT104I TTCGAA 1 cut(s) 235
BspT107I GGYRCC 1 cut(s) 1054
BsrBI CCGCTC 1 cut(s) 333
BsrDI GCAATG 1 cut(s) 801
BsrI ACTGG 2 cut(s) 324, 1114
BssECI CCNNGG 2 cut(s) 394, 1505
BssMI GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
BssNI GRCGYC 1 cut(s) 952
BssT1I CCWWGG 1 cut(s) 394
Bst2UI CCWGG 1 cut(s) 1376
Bst4CI ACNGT 6 cut(s) 148, 598, 835, 861, 904, 1256
Bst6I CTCTTC 1 cut(s) 102
BstACI GRCGYC 1 cut(s) 952
BstBI TTCGAA 1 cut(s) 235
BstC8I GCNNGC 3 cut(s) 172, 738, 1290
BstDEI CTNAG 4 cut(s) 164, 796, 1006, 1082
BstEII GGTNACC 1 cut(s) 1112
BstENI CCTNNNNNAGG 1 cut(s) 472
BstF5I GGATG 6 cut(s) 220, 327, 464, 820, 1246, 1501
BstFNI CGCG 1 cut(s) 1043
BstHHI GCGC 2 cut(s) 94, 1288
BstKTI GATC 9 cut(s) 37, 415, 436, 562, 844, 1102, 1179, 1191, 1462
BstMBI GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
BstMWI GCNNNNNNNGC 3 cut(s) 1028, 1243, 1481
BstNI CCWGG 1 cut(s) 1376
BstPI GGTNACC 1 cut(s) 1112
BstSCI CCNGG 3 cut(s) 692, 1374, 1504
BstSFI CTRYAG 1 cut(s) 547
BstUI CGCG 1 cut(s) 1043
BstV1I GCAGC 1 cut(s) 308
BstV2I GAAGAC 1 cut(s) 53
BstXI CCANNNNNNTGG 2 cut(s) 808, 881
Bsu15I ATCGAT 1 cut(s) 408
BsuRI GGCC 8 cut(s) 463, 518, 753, 783, 794, 853, 935, 996
BsuTUI ATCGAT 1 cut(s) 408
BtsCI GGATG 6 cut(s) 220, 327, 464, 820, 1246, 1501
BtsI GCAGTG 2 cut(s) 998, 1253
BtsIMutI CAGTG 6 cut(s) 831, 857, 998, 1107, 1149, 1253
BveI ACCTGC 1 cut(s) 664
Cac8I GCNNGC 3 cut(s) 172, 738, 1290
CciI TCATGA 2 cut(s) 471, 1165
CfoI GCGC 2 cut(s) 94, 1288
Cfr13I GGNCC 4 cut(s) 516, 851, 995, 1453
ClaI ATCGAT 1 cut(s) 408
CseI GACGC 1 cut(s) 960
Csp6I GTAC 2 cut(s) 55, 544
CviAII CATG 5 cut(s) 472, 590, 725, 790, 1166
CviQI GTAC 2 cut(s) 55, 544
DdeI CTNAG 4 cut(s) 164, 796, 1006, 1082
DpnI GATC 9 cut(s) 36, 414, 435, 561, 843, 1101, 1178, 1190, 1461
DpnII GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
EaeI YGGCCR 2 cut(s) 461, 933
Eam1104I CTCTTC 1 cut(s) 102
EarI CTCTTC 1 cut(s) 102
Ecl136II GAGCTC 1 cut(s) 86
Eco130I CCWWGG 1 cut(s) 394
Eco24I GRGCYC 2 cut(s) 88, 257
Eco32I GATATC 2 cut(s) 325, 1275
Eco47I GGWCC 1 cut(s) 1453
Eco53kI GAGCTC 1 cut(s) 86
Eco57I CTGAAG 4 cut(s) 65, 103, 702, 1161
Eco91I GGTNACC 1 cut(s) 1112
EcoICRI GAGCTC 1 cut(s) 86
EcoNI CCTNNNNNAGG 1 cut(s) 472
EcoO109I RGGNCCY 1 cut(s) 851
EcoO65I GGTNACC 1 cut(s) 1112
EcoRI GAATTC 1 cut(s) 1464
EcoRII CCWGG 1 cut(s) 1374
EcoRV GATATC 2 cut(s) 325, 1275
EcoT14I CCWWGG 1 cut(s) 394
EcoT22I ATGCAT 1 cut(s) 610
EcoT38I GRGCYC 2 cut(s) 88, 257
ErhI CCWWGG 1 cut(s) 394
FaeI CATG 5 cut(s) 475, 593, 728, 793, 1169
FaqI GGGAC 1 cut(s) 1166
FatI CATG 5 cut(s) 471, 589, 724, 789, 1165
FbaI TGATCA 3 cut(s) 559, 1099, 1188
Fnu4HI GCNGC 1 cut(s) 297
FokI GGATG 6 cut(s) 227, 314, 471, 827, 1253, 1488
FriOI GRGCYC 2 cut(s) 88, 257
Fsp4HI GCNGC 1 cut(s) 297
FspBI CTAG 3 cut(s) 447, 1289, 1314
GlaI GCGC 2 cut(s) 93, 1287
GluI GCNGC 1 cut(s) 297
HaeIII GGCC 8 cut(s) 463, 518, 753, 783, 794, 853, 935, 996
HapII CCGG 3 cut(s) 693, 1117, 1505
HgaI GACGC 1 cut(s) 960
HhaI GCGC 2 cut(s) 94, 1288
Hin1I GRCGYC 1 cut(s) 952
Hin1II CATG 5 cut(s) 475, 593, 728, 793, 1169
Hin6I GCGC 2 cut(s) 92, 1286
HinP1I GCGC 2 cut(s) 92, 1286
HinfI GANTC 5 cut(s) 140, 405, 481, 820, 1526
HpaII CCGG 3 cut(s) 693, 1117, 1505
HphI GGTGA 3 cut(s) 490, 1109, 1124
Hpy166II GTNNAC 1 cut(s) 285
Hpy188III TCNNGA 3 cut(s) 431, 472, 1166
Hpy8I GTNNAC 1 cut(s) 285
Hpy99I CGWCG 2 cut(s) 954, 1410
HpyAV CCTTC 7 cut(s) 33, 127, 478, 726, 864, 1136, 1414
HpyCH4III ACNGT 6 cut(s) 148, 598, 835, 861, 904, 1256
HpyCH4IV ACGT 1 cut(s) 1295
HpyF10VI GCNNNNNNNGC 3 cut(s) 1028, 1243, 1481
HpyF3I CTNAG 4 cut(s) 164, 796, 1006, 1082
HpySE526I ACGT 1 cut(s) 1295
Hsp92I GRCGYC 1 cut(s) 952
Hsp92II CATG 5 cut(s) 475, 593, 728, 793, 1169
HspAI GCGC 2 cut(s) 92, 1286
Ksp22I TGATCA 3 cut(s) 559, 1099, 1188
Kzo9I GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
LmnI GCTCC 4 cut(s) 193, 876, 1234, 1423
Lsp1109I GCAGC 1 cut(s) 308
LweI GCATC 4 cut(s) 283, 916, 1096, 1171
MaeI CTAG 3 cut(s) 447, 1289, 1314
MaeII ACGT 1 cut(s) 1295
MaeIII GTNAC 2 cut(s) 1012, 1112
MalI GATC 9 cut(s) 36, 414, 435, 561, 843, 1101, 1178, 1190, 1461
MbiI CCGCTC 1 cut(s) 333
MboI GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
MboII GAAGA 6 cut(s) 58, 119, 690, 950, 1076, 1085
MfeI CAATTG 1 cut(s) 576
MhlI GDGCHC 2 cut(s) 88, 257
MlsI TGGCCA 1 cut(s) 463
MluNI TGGCCA 1 cut(s) 463
MlyI GAGTC 1 cut(s) 1520
MmeI TCCRAC 1 cut(s) 436
Mox20I TGGCCA 1 cut(s) 463
Mph1103I ATGCAT 1 cut(s) 610
MroXI GAANNNNTTC 1 cut(s) 139
MscI TGGCCA 1 cut(s) 463
MseI TTAA 4 cut(s) 366, 527, 621, 702
MslI CAYNNNNRTG 4 cut(s) 476, 777, 806, 1008
Msp20I TGGCCA 1 cut(s) 463
MspI CCGG 3 cut(s) 693, 1117, 1505
MspR9I CCNGG 3 cut(s) 694, 1376, 1506
MunI CAATTG 1 cut(s) 576
MvaI CCWGG 1 cut(s) 1376
MvnI CGCG 1 cut(s) 1043
MwoI GCNNNNNNNGC 3 cut(s) 1028, 1243, 1481
NciI CCSGG 2 cut(s) 694, 1506
NdeII GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
NheI GCTAGC 1 cut(s) 1288
NlaIII CATG 5 cut(s) 475, 593, 728, 793, 1169
NlaIV GGNNCC 2 cut(s) 1056, 1425
NmuCI GTSAC 2 cut(s) 1012, 1112
NsiI ATGCAT 1 cut(s) 610
NspV TTCGAA 1 cut(s) 235
PagI TCATGA 2 cut(s) 471, 1165
PdmI GAANNNNTTC 1 cut(s) 139
PfeI GAWTC 4 cut(s) 140, 405, 481, 820
PkrI GCNGC 1 cut(s) 298
PleI GAGTC 1 cut(s) 1520
PpsI GAGTC 1 cut(s) 1520
PsiI TTATAA 1 cut(s) 1433
Psp124BI GAGCTC 1 cut(s) 88
Psp1406I AACGTT 1 cut(s) 1295
Psp6I CCWGG 1 cut(s) 1374
PspEI GGTNACC 1 cut(s) 1112
PspGI CCWGG 1 cut(s) 1374
PspN4I GGNNCC 2 cut(s) 1056, 1425
PspPI GGNCC 4 cut(s) 516, 851, 995, 1453
PstI CTGCAG 1 cut(s) 551
RsaI GTAC 2 cut(s) 56, 545
RsaNI GTAC 2 cut(s) 55, 544
RseI CAYNNNNRTG 4 cut(s) 476, 777, 806, 1008
SacI GAGCTC 1 cut(s) 88
SaqAI TTAA 4 cut(s) 366, 527, 621, 702
SatI GCNGC 1 cut(s) 297
Sau3AI GATC 9 cut(s) 34, 412, 433, 559, 841, 1099, 1176, 1188, 1459
Sau96I GGNCC 4 cut(s) 516, 851, 995, 1453
ScaI AGTACT 1 cut(s) 545
SchI GAGTC 1 cut(s) 1520
ScrFI CCNGG 3 cut(s) 694, 1376, 1506
SduI GDGCHC 2 cut(s) 88, 257
SfaNI GCATC 4 cut(s) 283, 916, 1096, 1171
SfcI CTRYAG 1 cut(s) 547
SfuI TTCGAA 1 cut(s) 235
SinI GGWCC 1 cut(s) 1453
SmiMI CAYNNNNRTG 4 cut(s) 476, 777, 806, 1008
SmlI CTYRAG 1 cut(s) 1528
SmoI CTYRAG 1 cut(s) 1528
SsiI CCGC 3 cut(s) 331, 422, 1043
SspMI CTAG 3 cut(s) 447, 1289, 1314
SstI GAGCTC 1 cut(s) 88
StyD4I CCNGG 3 cut(s) 692, 1374, 1504
StyI CCWWGG 1 cut(s) 394
TaaI ACNGT 6 cut(s) 148, 598, 835, 861, 904, 1256
TaiI ACGT 1 cut(s) 1298
TaqI TCGA 5 cut(s) 37, 235, 408, 945, 1462
TatI WGTACW 2 cut(s) 54, 543
TfiI GAWTC 4 cut(s) 140, 405, 481, 820
Tru1I TTAA 4 cut(s) 366, 527, 621, 702
Tru9I TTAA 4 cut(s) 366, 527, 621, 702
TscAI CASTG 6 cut(s) 838, 864, 1005, 1114, 1156, 1253
TseFI GTSAC 2 cut(s) 1012, 1112
TseI GCWGC 1 cut(s) 296
Tsp45I GTSAC 2 cut(s) 1012, 1112
TspDTI ATGAA 5 cut(s) 460, 618, 713, 1077, 1182
TspRI CASTG 6 cut(s) 838, 864, 1005, 1114, 1156, 1253
VpaK11BI GGWCC 1 cut(s) 1453
XagI CCTNNNNNAGG 1 cut(s) 472
XapI RAATTY 3 cut(s) 1067, 1379, 1464
XmnI GAANNNNTTC 1 cut(s) 139
XspI CTAG 3 cut(s) 447, 1289, 1314
ZrmI AGTACT 1 cut(s) 545
Zsp2I ATGCAT 1 cut(s) 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.